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Alignment for radish unigene UN23020

               1      -     51
UN23020        --> AAAAACATGAAGTACCCGTAATGATAAAATAGAAGACTTGTATCTGACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- ..................................................
FD561665       <-- ..................................................
FD982085       <-- ..................................................
EW725446       <-- ..................................................
EW725013       <-- ..................................................
EX771011       <-- ..................................................
EY939475       <-- ..................................................
EY916676       <-- ..................................................
EX772862       <-- ..................................................
FD565766       --> AAAAACATGAAGTACCCGTAATGATAAAATAGAAGACTTGTATCTGACAG
EW720431       --> ..................................................

               51     -    101
UN23020        --> TCTTGAGATTTTCACAATATGAAAATAAACCTCCGAAACAACGCGCAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- ..................................................
FD561665       <-- ..................................................
FD982085       <-- ..................................................
EW725446       <-- ..................................................
EW725013       <-- ..................................................
EX771011       <-- ..................................................
EY939475       <-- ..................................................
EY916676       <-- ..................................................
EX772862       <-- ..................................................
FD565766       --> TCTTGAGATTTTCACAATATGAAAATAAACCTCCGAAACAACGCGCAATT
EW720431       --> ..................................................

               101    -    151
UN23020        --> CCAGAACTATTAAGTATTACTTAAGACCACAACCTCTTGTCCTTAAACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- ..................................................
FD561665       <-- ..................................................
FD982085       <-- ..................................................
EW725446       <-- ..................................................
EW725013       <-- ..................................................
EX771011       <-- ..................................................
EY939475       <-- ..................................................
EY916676       <-- ..................................................
EX772862       <-- ..................................................
FD565766       --> CCAGAACTATTAAGTATTACTTAAGACCACAACCTCTTGTCCTTAAACCA
EW720431       --> CCAAAACTATTAAGTATTACTTAAAACCACAACCTCTTGTCCTTAAACCA

               151    -    201
UN23020        --> CTGTATTAAACATAAGCGACTCATAGTATATCAAAACCAAAAACTAATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- ..................................................
FD561665       <-- ..................................................
FD982085       <-- ..................................................
EW725446       <-- ..................................................
EW725013       <-- ..................................................
EX771011       <-- ..................................................
EY939475       <-- ..................................................
EY916676       <-- ..................................................
EX772862       <-- ..................................................
FD565766       --> CTGTATTAAACATAAGCGACTCATAGTATATCAAAACCAAAAACTAATTG
EW720431       --> CTGTACTAAACATAAGCGACTCATAGTATATCAAAACCAAAAACTAATTG

               201    -    251
UN23020        --> TCAAACCAAACCAATTATCTTTTCACTTGAAGCACTTGGCGTCCAAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- ..................................................
FD561665       <-- ..................................................
FD982085       <-- ..................................................
EW725446       <-- ..................................................
EW725013       <-- ..................................................
EX771011       <-- ..................................................
EY939475       <-- ..................................................
EY916676       <-- ..................................................
EX772862       <-- ..................................................
FD565766       --> TCAAACCAAACCAATTATCTTTTCACTTGAAGCACTTGGCGTCCAAGAAA
EW720431       --> TCAAACCAAACCAATTATCTTTTCACTTGAAGCACTTGGCGTCCAAAAAA

               251    -    301
UN23020        --> GCTTCACCTTCAAATGGCTCTGCGTCTTCGATCATCTGGCTAACACGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- ..................................................
FD561665       <-- ..................................................
FD982085       <-- ..................................................
EW725446       <-- ..................................................
EW725013       <-- ..................................................
EX771011       <-- ..................................................
EY939475       <-- ..................................................
EY916676       <-- ..................................................
EX772862       <-- ..................................................
FD565766       --> GCTTCACCTTCAAATGGCTCTGCGTCTTCGATCATCTGGCTAACACGCTC
EW720431       --> GCTTCACCTTCAAATGGCTCTGCGTCTTCAATCATCTGGCTAACACGCTC

               301    -    351
UN23020        --> CTTCTGTGCTTCATCCGAGATGTCAACCTTTGTCCATTCGTACAGCTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- ..................................................
FD561665       <-- ..................................................
FD982085       <-- ..................................................
EW725446       <-- ..................................................
EW725013       <-- ..................................................
EX771011       <-- ..................................................
EY939475       <-- ..................................................
EY916676       <-- ..................................................
EX772862       <-- ..................................................
FD565766       --> CTTCTGTGCTTCATCCGAGATGTCAACCTTTGTCCATTCGTACAGCTCCA
EW720431       --> CTTCTGTGCTTCATCCGAAATGTCAACCTTTGTCCATTCGTACAGCTCCA

               351    -    401
UN23020        --> TGTCGTACACCTCGTCCATTATGAACTTTGGGATCTCTGGCCCTCTGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- ..................................................
FD561665       <-- ..................................................
FD982085       <-- ..................................................
EW725446       <-- ..................................................
EW725013       <-- ..................................................
EX771011       <-- ..................................................
EY939475       <-- ..................................................
EY916676       <-- ..................................................
EX772862       <-- ..................................................
FD565766       --> TGTCGTACACCTCGTCCATTATGAACTTTGGGATCTCTGGCCCTCTGAAC
EW720431       --> TGTCGTACACCTCGTCCATTATGAACTTTGGGATCTCTGGCCCTCTGAAC

               401    -    451
UN23020        --> AACCACAAACCCTTCACCTTGAACGGAGCCTCTGACCCGCAGATCAGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- ..................................................
FD561665       <-- ..................................................
FD982085       <-- ..................................................
EW725446       <-- ..................................................
EW725013       <-- ..................................................
EX771011       <-- ..................................................
EY939475       <-- ..................................................
EY916676       <-- ..................................................
EX772862       <-- ..................................................
FD565766       --> AACCACAAACCCTTCACCTTGAACGGAGCCTCTGACCCGCAGATCAGCAT
EW720431       --> AACCACAAACCCTTCACCTTGAACGGAGCCTCTGACCCGCAAATCAGCAT

               451    -    501
UN23020        --> CTTTCCAAAGGCGTACTTACGAGCCAAGTCCATTCTCTGAAGGAACCCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- ..................................................
FD561665       <-- ..................................................
FD982085       <-- ..................................................
EW725446       <-- ..................................................
EW725013       <-- ..................................................
EX771011       <-- ..................................................
EY939475       <-- ..................................................
EY916676       <-- ..................................................
EX772862       <-- ..................................................
FD565766       --> CTTTCCAAAGGCGTACTTACGAGCCAAGTCCATTCTCTGAAGGAACCCGC
EW720431       --> CTTTCCAAAGGCGTACTTACAAGCCAAGTCCATTCTCTGAAGGAACCCGC

               501    -    551
UN23020        --> CTACCTTGTTGAGCGTCACAAAGGACACCATGTTCTCGTCGTTGTACTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- ..................................................
FD561665       <-- ..................................................
FD982085       <-- ..................................................
EW725446       <-- ..................................................
EW725013       <-- ..................................................
EX771011       <-- ..................................................
EY939475       <-- ..................................................
EY916676       <-- ..................................................
EX772862       <-- ..................................................
FD565766       --> CTACCTTGTTGAGCGTAACAAAGGACACCATGTTCTCGTCGTTGTACTTG
EW720431       --> CTACCTTGTTGAGCGTCACAAAGGACACCATGTTCTCGTCGTTGTACTTG

               551    -    601
UN23020        --> TAGTCACAGAACCATAGTGAGTATCCCTCTGGGTCATACATGTCCCAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- ..................................................
FD561665       <-- ..................................................
FD982085       <-- ..................................................
EW725446       <-- ..................................................
EW725013       <-- ..................................................
EX771011       <-- ..................................................
EY939475       <-- ..................................................
EY916676       <-- ..................................................
EX772862       <-- ..................................................
FD565766       --> TAGTCACAGAACCATAGTGAGTATCCCTCTGGGTCATACATGTCCCAGAA
EW720431       --> TAGTCACAAAACCATAGTGAGTATCCCTCTGGGTCATACATGTCCCAAAA

               601    -    651
UN23020        --> TCCTTTAATAGCAACCTCACGGAAGTTAGATTTGGTGTTCGAGTAAAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- ..................................................
FD561665       <-- ..................................................
FD982085       <-- ..................................................
EW725446       <-- ..................................................
EW725013       <-- ..................................................
EX771011       <-- ..................................................
EY939475       <-- ..................................................
EY916676       <-- ..................................................
EX772862       <-- ..................................................
FD565766       --> TCCTTTAATAGCAACCTCACGGAAGTTAGATTTGGTGTTCGAGTAAAGCC
EW720431       --> TCCTTTAATAGCAACCTCACGGAAGTTAGATTTGGTGTTCGAGTAAAGCC

               651    -    701
UN23020        --> TCTTCCACTCATCCAGAACCATTGGGCTTGGTGGTAGCAAATCAAGAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- ..................................................
FD561665       <-- ..................................................
FD982085       <-- ..................................................
EW725446       <-- ..................................................
EW725013       <-- ..................................................
EX771011       <-- ..................................................
EY939475       <-- ..................................................
EY916676       <-- ..................................................
EX772862       <-- ..................................................
FD565766       --> TCTTCCACTCATCCAGAACCATTGGGCTTGGTGGTAGCAAATCAAGAGGG
EW720431       --> TCTTCCACTCATCCAGAACCATTGGGCTTGGTGGTAGCAAATCAAGAGGG

               701    -    751
UN23020        --> TTCTTTGCTTTGGGCTTTGGTGCCTCTTCTTCCTCTTCAACAACCTTAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- ..................................................
FD561665       <-- ..................................................
FD982085       <-- ..................................................
EW725446       <-- ..................................................
EW725013       <-- ..................................................
EX771011       <-- ..................................................
EY939475       <-- ..................................................
EY916676       <-- ..................................................
EX772862       <-- ..................................................
FD565766       --> TTCTTTGCTTTGGGCTTTGGTGCCT.........................
EW720431       --> TTCTTTGCTTTGGGCTTTGGTGCCTCTTCTTCCTCTTCAACAACCTTAGG

               751    -    801
UN23020        --> TGCCTCTGGTGCAGGGGCAGCCTTTTTCTTAGGCTCCTCTTTGGGCTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- ........................TTTCTTAGGCTCCTCTTTGGGCTTTG
FD561665       <-- .........................................TGGGCTT-G
FD982085       <-- ..................................................
EW725446       <-- ..................................................
EW725013       <-- ..................................................
EX771011       <-- ..................................................
EY939475       <-- ..................................................
EY916676       <-- ..................................................
EX772862       <-- ..................................................
FD565766       --> ..................................................
EW720431       --> TGCCTCTGGTGCAGGGGCAGCCTTTTTCTTAGGCTCCTCCTTGGGCTTTG

               801    -    851
UN23020        --> CAGACTGGGCAGCTTTCTTGGAAGCGACAGGAGGGACAGCTTCAGTCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- CAGACTGGGCAGCTTTCTTGGAAGCGACAGGAGGGACAGCTTCAGTCTGT
FD561665       <-- CAGGCTGGGCAGCTT-C-TGGAAGCGACAGGAGGGACAGCTTCAGTCTGT
FD982085       <-- ..................................................
EW725446       <-- ..................................................
EW725013       <-- ..................................................
EX771011       <-- ..................................................
EY939475       <-- ..................................................
EY916676       <-- ..................................................
EX772862       <-- ..................................................
FD565766       --> ..................................................
EW720431       --> CAGACTGGGCAGCTTTCTTGGAAGCGACAGGAGGGACAGCTTCAGTCTGT

               851    -    901
UN23020        --> TTGACATCACCCACAACTTTCTTGAAGTTCGGTTGGTTGATCACGGTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- TTGACATCACCCACAACTTTCTTGAAGTTCGGTTGGTTGATAATGGTCCA  Raphanus sativus var. oleiformis
FD561665       <-- TTGACACCACCCACAACCTTCTTGAAGTTCGGTTGGTTGATAATGGTCCA  Raphanus sativus var. oleiformis
FD982085       <-- .....................TTGAAGTTTGGTTGGTTGATCACGGTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725446       <-- ............................ttGGTTGG-TGATCACGGTCCA  Raphanus sativus cv Early Scarlet Globe
EW725013       <-- .....................................TGATCACGGTCCA  Raphanus sativus cv Early Scarlet Globe
EX771011       <-- ......................................GATAACGGTCCA  Raphanus raphanistrum subsp. landra
EY939475       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY916676       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772862       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD565766       --> ..................................................  Raphanus sativus var. oleiformis
EW720431       --> TTGACATCACCCACAACTTTCTTGAAGTTCGGTTG...............  Raphanus sativus var. oleiformis

               901    -    951
UN23020        --> GAAGTATCTCTCAACATGAGGGAATGCAGAGGTAAAGCTCTTGGTCATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- GAAGTATCTCTCAACATGAGGGAATGCAGAGGTAAAGCTCTTGGTCATGA
FD561665       <-- GAAGTATCTCTCAACATGAGGGAATGCAGAGGTAAAGCTCTTGGTCATGA
FD982085       <-- GAAGTATCTCTCAACATGAGGGAATGCAGAGGTAAAGCTCTTGGTCATGA
EW725446       <-- GAAGTATCTCTCAACATGAGGGAATGCAGAGGTAAAGCTCTTGGTCATGA
EW725013       <-- GAAGTATCTCTCAACATGAGGGAATGCAGAGGTAAAGCTCTTGGTCATGA
EX771011       <-- GAAGTATCTCTCAACATGAGGGAATGCAGAGGTAAAGCTCTTGGTAATGA
EY939475       <-- .AAGTATCTCTCAACATGAGGGAATGCAGAGGTAAAGCTCTTGGTCATGA
EY916676       <-- .................GAGGGAATGCAGAGGTAAAGCTCTTGGTCATGA
EX772862       <-- ..................................................
FD565766       --> ..................................................
EW720431       --> ..................................................

               951    -   1001
UN23020        --> CAGTGGCAAATCCAAGGTTCAAGTTGCAGACAGTGATGATATCAGCGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- CAGTGGCAAATCCAAGGTTCAAGTTGCAGACAGTGATGATATCCGCGAGG
FD561665       <-- CAGTGGCAAATCCAAGGTTCAAGTTGCAGACAGTGATGATATCAGCGAGG
FD982085       <-- CAGTGGCAAATCCAAGGTTCAAGTTGCAGACAGTGATGATATCAGCGAGG
EW725446       <-- CAGTGGCAAATCCAAGGTTCAAGTTGCAGACAGTGATGATATCAGCGAGG
EW725013       <-- CAGTGGCAAATCCAAGGTTCAAGTTGCAGACAGTGATGATATCAGCGAGG
EX771011       <-- CAGTGGCAAATCCAAGGTTCAAGTTGCAGACAGTGATGATATCAGCAAGG
EY939475       <-- CAGTGGCAAATCCAAGGTTCAAGTTGCAGACAGTGATGATATCAGCGAGG
EY916676       <-- CAGTGGCAAATCCCAGGTTCAAGTTGCAGACAGTGATGATATCAGCGAGG
EX772862       <-- ..................................................
FD565766       --> ..................................................
EW720431       --> ..................................................

               1001   -   1051
UN23020        --> GTAACAGAGTGTCCAACTAGGTAAGTGTTGGAAGTGAGATGAGTGTTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- GTAACGGAGTGTCCAACTAGGTAGGTGTTGGAAGCGAGATGAGTGTTCAG  Raphanus sativus var. oleiformis
FD561665       <-- GTAACGGAGTGTCCAACTAGGTAGGTGTTGGAAGCGAGATGAGTGTTCAG  Raphanus sativus var. oleiformis
FD982085       <-- GTAACAGAGTGTCCAACTAGGTAAGTGTTGGAAGTGAGATGAGTGTTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725446       <-- GTAACAGAGTGTCCAACTAGGTAAGTGTTGGAAGTGAGATGAGTGTTCAG  Raphanus sativus cv Early Scarlet Globe
EW725013       <-- GTAACAGAGTGTCCAACTAGGTAAGTGTTGGAAGTGAGATGAGTGTTCAG  Raphanus sativus cv Early Scarlet Globe
EX771011       <-- GTTACAGAGTGTCCAACAAGGTAAGTGCTGGAAGCGAGATGAGTGTTCAG  Raphanus raphanistrum subsp. landra
EY939475       <-- GTAACAGAGTGTCCAACTAGGTAAGTGTTGGAAGCGAGATGAGTGTTCAG  Raphanus sativus cv Early Scarlet Globe
EY916676       <-- GTAACAGAGTGTCCAACAAGGTAAGTGTTGGAAGTGAGGTGAGTGTTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772862       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD565766       --> ..................................................  Raphanus sativus var. oleiformis
EW720431       --> ..................................................  Raphanus sativus var. oleiformis

               1051   -   1101
UN23020        --> GGCTTCAAGTGCTCTTTTCAACGCAGAGATAGCGGCTTCCTCACCAGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- GGCTTCAAGTGCTCTTTTCAACGCAGAGATAGCGGCTTCCTCACCAGGTG
FD561665       <-- GGCTTCAAGTGCTCTTTTCAACGCAGAGATAGCGGCTTCCTCACCAGGTG
FD982085       <-- GGCTTCAAGTGCTCTTTTCAACGCAGAGATAGCGGCTTCCTCACCAGGTG
EW725446       <-- GGCTTCAAGTGCTCTTTTCAACGCAGAGATAGCGGCTTCCTCACCAGGTG
EW725013       <-- GGCTTCAAGTGCTCTTTTCAACGCAGAGATAGCGGCTTCCTCACCAGGTG
EX771011       <-- GGCTTCAAGTGCTCTTTTCAACGCAGAGATAGCGGCTTCCTCACCAGGTG
EY939475       <-- GGCTTCAAGTGCTCTTTTCAACGCAGAGATAGCGGCTTCCTCACCAGGTG
EY916676       <-- GGCTTCAAGTGCTCTTTTCAACGCAGAGATAGCGGCTTCCTCACCAGGTG
EX772862       <-- ..................................................
FD565766       --> ..................................................
EW720431       --> ..................................................

               1101   -   1151
UN23020        --> CACTGTATGCCATAAAGCCCATTCTTGGGCCGAACCACTTCAAGATGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- TACTGTATGCCATAAAGCCCATTCTTGGGCCGAACCACTTCAAGATGTTA
FD561665       <-- CACTGTATGCCATAAAGCCCATTCTTGGGCCGAACCACTTCAAGATGTTA
FD982085       <-- AACTGTATGCCATAAAGCCCATTCTTGGGCCGAACCACTTCAAGATGTTA
EW725446       <-- CACTGTATGCCATAAAGCCCATTCTTGGGCCGAACCACTTCAAGATGTTA
EW725013       <-- CACTGTATGCCATAAAGCCCATTCTTGGGCCGAACCACTTCAAGATGTTA
EX771011       <-- CACTGTATGCCATAAAGCCCATTCTTGGGCCGAACCACTTCAAGATGTTA
EY939475       <-- CACTGTATGCCATAAAGCCCATTCTTGGGCCGAACCACTTCAAGATGTTA
EY916676       <-- CACTGTATGCCATAAAGCCCATTCTTGGGCCGAACCACTTCAAGATGTTA
EX772862       <-- ..................................................
FD565766       --> ..................................................
EW720431       --> ..................................................

               1151   -   1201
UN23020        --> CCATATATCTCCAACGTGGAGAAATCGCTCCATTGCTCAACGTGTGCGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- CCATATATCTCCAACGTGGAGAAATCGCTCCATTGCTCAACGTGTGCGTA
FD561665       <-- CCATATATCTCCAACGTGGAGAAATCGCTCCATTGCTCAACGTGTGCGTA
FD982085       <-- CCATATATCTCCAACGTGGAGAAATCGCTCCATTGCTCAACGTGTGCGTA
EW725446       <-- CCATATATCTCCAACGTGGAGAAATCGCTCCATTGCTCAACGTGTGCGTA
EW725013       <-- CCATATATCTCCAACGTGGAGAAATCGCTCCATTGCTCAACGTGTGCGTA
EX771011       <-- CCATATATCTCCAACGTGGAGAAATCGCTCCATTGCTCAACGTGTGCGTA
EY939475       <-- CCATATATCTCCAACGTGGAGAAATCGCTCCATTGCTCAACGTGTGCGTA
EY916676       <-- CCATATATCTCCAAAGTGGAGAAATCGCTCCATTGCTCAACGTGTGCGTA
EX772862       <-- ..................................................
FD565766       --> ..................................................
EW720431       --> ..................................................

               1201   -   1251
UN23020        --> TTCGATCAGAGAGGAACCGTTCAAGGAGTTCTCACCGTTCAACCGGCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- TTCGATCAGAGAGGAACCGTTCAAGGAGTTCTCACCGTTCAACCGGCTTA
FD561665       <-- TTCGATCAGAGAGGAACCGTTCAAGGAGTTCTCACCGTTCAACCGGCTTA
FD982085       <-- TTCGATCAGAGAGGAACCGTTCAAGGAGTTCTCACCGTTCAACCGGCTTA
EW725446       <-- TTCGATCAGAGAGGAACCGTTCAAGGAGTTCTCACCGTTCAACCGGCTTA
EW725013       <-- TTCGATCAGAGAGGAACCGTTCAAGGAGTTCTCACCGTTCAACCGGCTTA
EX771011       <-- TTCGATCAGAGAGGAACCGTTCAAGGAGTTCTCACCGTTCAACCGGCTTA
EY939475       <-- TTCGATCAGAGAGGAACCGTTCAAGGAGTTCTCACCGTTCAACCGGCTTA
EY916676       <-- TTCGATCAGAGAGGAACCGTTCAAGGAGTTCTCACCGTTCAACCGGCTTA
EX772862       <-- ..................................................
FD565766       --> ..................................................
EW720431       --> ..................................................

               1251   -   1301
UN23020        --> CATAACGGGCAATGGCGTTGCTCTCAAATATGGGACCCTCGGGAGTCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- CATAACGGGCAATGGCGTTGCTCTCAAATATGGGACCCTCGGGAGTCTCA
FD561665       <-- CATAACGGGCAATGGCGTTGCTCTCAAATATGGGACCCTCGGGAGTCTCA
FD982085       <-- CATAACGGGCAATGGCGTTGCTCTCAAATATGGGACCCTCGGGAGTCTCA
EW725446       <-- CATAACGGGCAATGGCGTTGCTCTCAAATATGGGACCCTCGGGAGTCTCA
EW725013       <-- CATAACGGGCAATGGCGTTGCTCTCAAATATGGGACCCTCGGGAGTCTCA
EX771011       <-- CATAACGGGCAATGGCGTTGCTCTCAAATATGGGACCCTCGGGAGTCTCA
EY939475       <-- CATAACGGGCAATGGCGTTGCTCTCAAAAATGGGACCCTCGGGAGTCTCA
EY916676       <-- CATAACGGGCAATGGCGTTGCTCTCAAATATGGGACCCTCGGGTGTCTCA
EX772862       <-- ..................................................
FD565766       --> ..................................................
EW720431       --> ..................................................

               1301   -   1351
UN23020        --> AGTACAGGAACCTTTCCCAAAGGATTCATCTTGAGGAACTCTGGGGTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- AGTACAGGAGCCTTTCCCAAAGGATTCATCTTGAGGAACTCTGGGGTCTT
FD561665       <-- AGTACAGGAACCTTTCCCAAAGGATTCATCTTGAGGAACTCTGGGGTCTT
FD982085       <-- AGTACAGGAACCTTTCCCAAAGGATTCATCTTCAGGAACTCTGGGGTCTT
EW725446       <-- AGTACAGGAACCTTTCCCAAAGGATTCATCTTCAGGAACTCTGGGGTCTT
EW725013       <-- AGTACAGGAACCTTTCCCAAAGGATTCATCTTCAGGAACTCTGGGGTCTT
EX771011       <-- AGTACAGGAACCTTTCCCAAAGGATTCATCTTGAGGAACTCTGGAGTCTT
EY939475       <-- AGTACAGGAACCTTTCCCAAAGGGTTCATCTTGAGGAACTCGGGGGTCTT
EY916676       <-- AGTACAGGAACCTTTCCCAAAGGGTTCATCTTGAGGAACTCTGGGGTCTT
EX772862       <-- ..................................................
FD565766       --> ..................................................
EW720431       --> ..................................................

               1351   -   1401
UN23020        --> GTTGGTGACACCCATCTGAAAGTCAGAGGGCACATCGATCTTCACACCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- GTTGGTGACACCCATCTGAAAGTCAGAGGGCACATCGATCTTCACACCAA
FD561665       <-- GTTGGTGACACCCATCTGAAAGTCAGAGGGCACATCGATCTTCACACCAA
FD982085       <-- GTTGGTGACACCCATCTGAAAGTCAGAGGGCACATCGATCTTCACACCAA
EW725446       <-- GTTGGTGACACCCATCTGAAAGTCAGAGGGCACATCGATCTTCACACCAA
EW725013       <-- GTTGGTGACACCCATCTGAAAGTCAGAGGGCACATCGATCTTCACACCAA
EX771011       <-- GTTGGTCACACCCATCTGAAAGTCAGAGGGCACATCGATCTTCGCACCAA
EY939475       <-- GTTGGTGACACCCATCTGAAAGTCAGAGGGCACATCGATCTTCACACCAA
EY916676       <-- GTTGGTCACACCCATCTGAAAATCAGAAGGCACATCGATCTTCACACCAA
EX772862       <-- ..................................................
FD565766       --> ..................................................
EW720431       --> ..................................................

               1401   -   1451
UN23020        --> CGTACTCCGCAGCAATGAGTGCCTTGTCAGCATTTTTGTTTCCCTTGTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- CGTACTCCGCAGCAATGAGTGCCTTGTCAGCATTTTTGTTTCCCTTGTAT  Raphanus sativus var. oleiformis
FD561665       <-- CGTACTCCGCAGCAATGAGTGCCTTGTCAGCATTTTTGTTTCCCTTGTAT  Raphanus sativus var. oleiformis
FD982085       <-- CGTACTCCGCAGCAATGAGTGCCTTGTCAGCATTTTTGTTACCCTTGTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725446       <-- CGTACTCCGCAGCAATGAGTGCCTTGTCAGCATTTTTGTTACCCTTGTAT  Raphanus sativus cv Early Scarlet Globe
EW725013       <-- CGTACTCCGCAGCAATGAGTGCCTTGTCAGCATTTTTGTTACCCTTGTAT  Raphanus sativus cv Early Scarlet Globe
EX771011       <-- CGTACTCCGCAGCAATGAGTGCCTTGTCAGCATTTTTGTTTCCCTTGTAT  Raphanus raphanistrum subsp. landra
EY939475       <-- CGTACTCCGCAGCAATGAGTGCCTTGTCAGCATTTTTGTTCCCCTTGTAT  Raphanus sativus cv Early Scarlet Globe
EY916676       <-- CGTACTCCGCAGCAATGAGTGCCTTGTCAGCATTTTTGTTTCCCTTGTAc  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772862       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD565766       --> ..................................................  Raphanus sativus var. oleiformis
EW720431       --> ..................................................  Raphanus sativus var. oleiformis

               1451   -   1501
UN23020        --> GTGTGCAACACCAAAGCCATTGCTCAGACGGACTCCAACTTCGGATACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- GTGTGCA-CACCAAAGCCATTGCTCAGACGGACTCCAACTTCGGATACTG
FD561665       <-- GTGTGCAACACCAAAGCCATTGCTCAGACGGACTCCAACTTCGGATACTG
FD982085       <-- GTGTGCAACACCAAAGCCATTGCTCAGACGGACTCCAACTTCGGATACTG
EW725446       <-- GTGTGCAACACCAAAGCCATTGCTCAGACGGACTCCAACTTCGGATAATG
EW725013       <-- GTGTGCAACACCAAAGCCATTGCTCAGACGGACTCCAACTTCGGATAATG
EX771011       <-- GTGTGCAACACCAAAGCCATTGCTCAGACGGACTCCAACTTCGGATACTG
EY939475       <-- GTGTGCAACACCAAAGCCATTGCTCAGACGGACTCCAACTTCGGATACTG
EY916676       <-- ..................................................
EX772862       <-- .......................TCAGACGGACTCCAACTTCGGATACTG
FD565766       --> ..................................................
EW720431       --> ..................................................

               1501   -   1551
UN23020        --> GATCAGAGAGAGGTTAGAGGCGAGCAAATCGAGAGAAGAGTCTAGTGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- GATCAGAGAGAGGTTAGAGGCGAGCAAATCGAGAGAAGAGTCTAGTGAGG
FD561665       <-- GATCAGAGAGAGGTTAGAGGCGAGCAAATCGAGAGAAGAGTCTAGTGAGG
FD982085       <-- GATCAGAGAGAGGTTAGAGGCGAGCAAATCGAGAGAAGAGTCTAGTGAGG
EW725446       <-- GATCAGAGAGAGGTTAGA................................
EW725013       <-- GATCAGAGAGAGGTTAGAGGCGAGCAAATCGAGAGAAGAGTCTAGTGAGG
EX771011       <-- GATCAGAGAGAGGTTAGAGGCGAGCAAATCGAGAGAAGAGTCTAGTGAGG
EY939475       <-- GATCAGAGAGAGGTTACAGGCGAGCAAATCGAGAGAAGAGTCTAGTcc..
EY916676       <-- ..................................................
EX772862       <-- GATCAGAGAGAGGTTAGAGGCGAGCAAATCGAGAGAAGAGTCTAGTGAGG
FD565766       --> ..................................................
EW720431       --> ..................................................

               1551   -   1601
UN23020        --> CGGAGAGAGCTATAGAATTAGGGTTTTTATATTCGTAGTGTATTCCCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716149       <-- CGGcc.............................................
FD561665       <-- Ccc...............................................
FD982085       <-- CGGAGAGAGCTATcc...................................
EW725446       <-- ..................................................
EW725013       <-- CGGAGAGAGCTATcc...................................
EX771011       <-- CGGAGAGAGCTATAGAATTAGGGTTTTTATATTCGTAGTGTATTCCCCTC
EY939475       <-- ..................................................
EY916676       <-- ..................................................
EX772862       <-- CGGAGAGAGCTATAGAATTAGGGTTTTTATATTCGTAGTGTATTCCCCTC
FD565766       --> ..................................................
EW720431       --> ..................................................

               1601   -   1651
UN23020        --> TCCTCC
                   ~~~~~~
EW716149       <-- ......
FD561665       <-- ......
FD982085       <-- ......
EW725446       <-- ......
EW725013       <-- ......
EX771011       <-- TCCTCC
EY939475       <-- ......
EY916676       <-- ......
EX772862       <-- TCCTCC
FD565766       --> ......
EW720431       --> ......