RadishBase

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Alignment for radish unigene UN23038

               1      -     51
UN23038        --> GGTTCAACAGCAGTTTCTGTTATAAATTTGTAACTTTTATTTAATAAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973810       <-- ..................gtaATAAATTTGTAACTTTTATTTAATAAAAG
EW713510       <-- ..................................................
EV536420       <-- ..................................................
EW714365       <-- ..................................................
EY905704       <-- ..................................................
EW713509       <-- ..................................................
FD980283       <-- ..................................................
FD989552       <-- ..................................................
EY950308       <-- ..................................................
FD541825       <-- ..................................................
FD557187       <-- ..................................................
FD971412       <-- ..................................................
EX902584       <-- ..................................................
EY907453       <-- ..................................................
EW718626       --> GGTTCAACAGCAGTTTCTGTTATAAATTTGTAATTTTTATTTAATAGAAG
EY902075       --> ..................gtaATAAATTTGTAACTCTTATTTAATAAAAG
FD934918       --> ..................gtaATAAATTT--AACTTTTATTTAATAAAAG
EW718366       --> ......................................ATTTAATAGAAG
FD985319       --> ..................................................
EW719177       --> ..................................................
FD547042       --> ..................................................
FD976191       --> ..................................................

               51     -    101
UN23038        --> TGAGTTTATCCAGCAAAAAAGAAAGAAACCTTATGATTGAATTAATTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973810       <-- TGAGTTTATCCAGCAAAAAAGAAAGAAACCTTATGATTGAATTAATTTTA
EW713510       <-- ..................................................
EV536420       <-- ..................................................
EW714365       <-- ..................................................
EY905704       <-- ..................................................
EW713509       <-- ..................................................
FD980283       <-- ..................................................
FD989552       <-- ..................................................
EY950308       <-- ..................................................
FD541825       <-- ..................................................
FD557187       <-- ..................................................
FD971412       <-- ..................................................
EX902584       <-- ..................................................
EY907453       <-- ..................................................
EW718626       --> TGAATTTATCCAGCAAAAAA-AAAGAAACCTTATGATTGACTTAATTTTA
EY902075       --> TGAGTTTATCCAGCAAAAAAGAAAGAAACCTTATGATTGAATTAATTTTA
FD934918       --> TGAGTTTATCCAGCAAAAAAGAAAGAAACCTTATGATTGAATTAATTTTA
EW718366       --> TGAATTTATCCAGCAAAAAA-AAAGAAACCTTATGATTGACTTAATTTTA
FD985319       --> .......ATCCAGCAAAAAAGAAAGAAACCTTATGATTGAATTAATTTTA
EW719177       --> ..................aaaAAAGAAACCTTATGATTGAATTAATTTTA
FD547042       --> ..................aaaAAAAAAACCTTATGATTGAATTAATTTTA
FD976191       --> ............................CCTTATGATTGAATTAATTTTA

               101    -    151
UN23038        --> CATAAATTGTTTTTTTA-TACTTTTAGTTCTTTTAAATATTACGGACCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973810       <-- CATAAATTGGTTTTTTA-TACTTTTAGTTCT--TAAATATTACGGACCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW713510       <-- ..................................................  Raphanus sativus var. oleiformis
EV536420       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714365       <-- ..................................................  Raphanus sativus var. oleiformis
EY905704       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW713509       <-- ..................................................  Raphanus sativus var. oleiformis
FD980283       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989552       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY950308       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD541825       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD557187       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD971412       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX902584       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY907453       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW718626       --> CATAAATTGATTTTTTAATACTTTTAGTTCTTTTAAATATTACGGACCGA  Raphanus sativus var. oleiformis
EY902075       --> CATAAATTGGTTTTTTA-TACTTTTAGTTCTT--AAATATTACGGACCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD934918       --> CATAAATTGATTTTTTA-TACTTTTAGTTCTTTTAAATATTACGGACCGA  Raphanus sativus var. oleiformis
EW718366       --> CATAAATTGATTTTTTAATACTTTTAGTTCTTTTAAATATTACGGACCGA  Raphanus sativus var. oleiformis
FD985319       --> CATAAATTGATTTTTTA-TACTTTTAGTTCTTTTAAATATTACGGACCGA  Raphanus raphanistrum subsp. landra
EW719177       --> CATAAATTGATTTTTTA-TACTTTTAGTTCTTTTAAATATTACGGACCGA  Raphanus sativus var. oleiformis
FD547042       --> CATAAATTGTTTTTTTA-TACTTTTAGTTCTT--AAATATTACGGACCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976191       --> CATAAATTGTTTTTTTA-TACTTTTAGTTCTT--AAATATTACGGACCGA  Raphanus raphanistrum subsp. raphanistrum (NY)

               151    -    201
UN23038        --> CTTGGTAATAAAAGGGTAAAATTCAAGCCTAAAAGTACAGCTCCTACCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973810       <-- CTTGGTAATAAAAGGGTAAAATTCAAGCCTAAAAGTACAGCTCCTACCTA
EW713510       <-- ................................AAGTACAGCTCCTAC-TA
EV536420       <-- ..................................................
EW714365       <-- ..................................................
EY905704       <-- ..................................................
EW713509       <-- ..................................................
FD980283       <-- ..................................................
FD989552       <-- ..................................................
EY950308       <-- ..................................................
FD541825       <-- ..................................................
FD557187       <-- ..................................................
FD971412       <-- ..................................................
EX902584       <-- ..................................................
EY907453       <-- ..................................................
EW718626       --> CTTGGTAATAAAAGGGTAAAATTCAAGCCTAAAAGTACAGCTCCTACCTA
EY902075       --> CTTGGTAATAAAAGGGTAAAATTCAAGCCTAAAAGTACAGCTCCTACCTA
FD934918       --> CTTGGTAATAAAAGGGTAAAATTCAAGCCTAAAAGTACAGCTCCTACCTA
EW718366       --> CTTGGTAATAAAAGGGTAAAATTCAAGCCTAAAAGTACAGCTCCTACCTA
FD985319       --> CTTGGTAATAAAAGGGTAAAATTCAAGCCTAAAAGTACAGCTCCTACCTA
EW719177       --> CTTGGTAATAAAAGGGTAAAATTCAAGCCTAAAAGTACAGCTCCTACCTA
FD547042       --> CTTGGTAATAAAAGGGTAAAATTCAAGCCTAAAAGTACAAATCCTACCTA
FD976191       --> CTTGGTAATAAAAGGGTAAAATTCAAGCCTAAAAGTACAGCTCCTACCTA

               201    -    251
UN23038        --> CAACCCTCGCTCCTCGAAAATTATCCACGCAATGGTGAAAATGAAAGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973810       <-- CAACCCTCGCTCCTCGAAAATTATCCACGCAATGGTGAAAATGAAAGGTT
EW713510       <-- CAACCCTCGCTCCTCGAAAATTATCCACGCAATGGTGAAAATGAAAGGTT
EV536420       <-- .AACTCTCGTTCCTCGAAAATTATCCACGCAATTGTGAAAATGAAAGGTT
EW714365       <-- .AACCCTCGCTCCTCGAAAATTATCCACGCAATGGTGAAAATGAAAGGTT
EY905704       <-- ..........TCCTCGAAA-TTATCCACGCAATG-TGAAA-TGAAAGGTT
EW713509       <-- .....................TATCCACGCAATGGTGAAAATGAAAGGTT
FD980283       <-- ..........................................GAAAGGTT
FD989552       <-- ..................................................
EY950308       <-- ..................................................
FD541825       <-- ..................................................
FD557187       <-- ..................................................
FD971412       <-- ..................................................
EX902584       <-- ..................................................
EY907453       <-- ..................................................
EW718626       --> CAACCCTCGCTCCTCGAAAATTATCCACGCAATGGTGAAAATGAAAGGTT
EY902075       --> CAACCCTCGCTCCTCGAAAATTATCCACGCAATGGTGAAAATGAAAGGTT
FD934918       --> CAACCCTCGCTCCTCGAAAATTATCCACGCAATGGTGAAAATGAAAGGTT
EW718366       --> CAACCCTCGCTCCTCGAAAATTATCCACGCAATGGTGAAAATGAAAGGTT
FD985319       --> CAACCCTCGCTCCTCGAAAATTATCCACGCAATGGTGAAAATGAAAGGTT
EW719177       --> CAACCCTCGCTCCTCGAAAATTATCCACGCAATGGTGAAAATGAAAGGTT
FD547042       --> CAACCCTCGCTCCTCGAAAATTATCCACGCAACGGTGAAAATGAAAGGTT
FD976191       --> CAACCCTCGCTCCTCGAAAATTATCCACGCAATGGTGAAAATGAAAGGTT

               251    -    301
UN23038        --> TTATACCACACACACTCCTTACAAGCTTTTTGCGATAAGTCTCTCGCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973810       <-- TTATACCACACACACTCCTTACAAGCTTTTTGCGATAAGTCTCTCGCACA
EW713510       <-- TTATACCACACACACTCTTTACAAGCTTTTTGCGATAAGTCTCTCGCACA
EV536420       <-- TTATACCACACACACTCCTTACAAGCTTTTTGCGATAAGTCTCTCGCACA
EW714365       <-- TTATACCACACACACTCCTTACAAGCTTTT-GCGATAAGTCTCTCGCACA
EY905704       <-- T-ATACCACACACACTC-TTACAAGCTTTT-GCGATAAGTCTCTCGCACA
EW713509       <-- TTATACCACACACACTCCTTACAAGCTTTTTGCGATAAGTCTCTCGCACA
FD980283       <-- TTATACCACACACACTCCTTACAAGCTTTTTGCGATAAGTCTCTCGCACA
FD989552       <-- ..................................................
EY950308       <-- ..................................................
FD541825       <-- ..................................................
FD557187       <-- ..................................................
FD971412       <-- ..................................................
EX902584       <-- ..................................................
EY907453       <-- ..................................................
EW718626       --> TTATACCACACACACTCCTTACAAGCTTTTTGCGATAAGTCTCTCGCACA
EY902075       --> TTATACCACACACACTCCTTACAAGCTTTTTGCGATAAGTCTCTCGCACA
FD934918       --> TTATACCACACACACTCCTTACAAGCTTTTTGCGATAAGTCTCTCGCACA
EW718366       --> TTATACCACACACACTCCTTACAAGCTTTTTGCGATAAGTCTCTCGCACA
FD985319       --> TTATACCACAAACACTCCTTACAAGCTTTTTGCGATAAGTCTCTCGCACA
EW719177       --> TTATACCACACACACTCCTTACAAGCTTTTTGCGATAAGTCTCTCGCACA
FD547042       --> TTATACCACACACACTCCTTACAAGCTTTTTGCGATAAGTCTCTCGCACA
FD976191       --> TTATACCACACACACTCCTTACAAGCTTTTTGCGATAAGTCTCTCGCACA

               301    -    351
UN23038        --> CTGCACCATTCCGTATACCATCTCACCCTT-GTACCGCTTCTCCCCC-AC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973810       <-- CTGCACCATTCCGTGTACCATCTCACCCTT-GTACCGCTTCTCCCCC-AC
EW713510       <-- CTGCACCATTCCGTATACCATCTCACCCTT-GTACCGCTTCTCCCCC-AC
EV536420       <-- CTGCACCATTCCATATACCATATCACCCTT-GTACCGCTTCTCCCCC-AC
EW714365       <-- CTGCACCATTCCGTATACCATCTCACCCTT-GTACCGCTTCTCCCCC-AC
EY905704       <-- CTGCACCATTCCGTATACCATCTCACCCTT-GTACCGCTTCTCCCCCCAC
EW713509       <-- CTGCACCATTCCGTATACCATCTCACCCTTTGTACCGCTTCTCCCCC-AC
FD980283       <-- CTGCACCATTCCGTATACCATCTCACCCTT-GTACCGCTTCTCCCCC-AC
FD989552       <-- ...............TACCATCTCACCCTT-GTACCGCTTCTCCCCC-AC
EY950308       <-- ................................TACCGCTTCTCCCCC-AC
FD541825       <-- ..................................................
FD557187       <-- ..................................................
FD971412       <-- ..................................................
EX902584       <-- ..................................................
EY907453       <-- ..................................................
EW718626       --> CTGCACCATTCCGTATACCATCTCACCCTT-GTACCGCTTCTCCCCC-AC
EY902075       --> CTGCACCATTCCGTATACCATCTCACCCTT-GTACCGCTTCTCCCCC-AC
FD934918       --> CTGCACCATTCCGTATACCATCTCACCCTT-GTACCGCTTCTCCCCC-AC
EW718366       --> CTGCACCATTCCGTATACCATCTCACCCTT-GTACCGCTTCTCCCCC-AC
FD985319       --> CTGCACCATTCCGTATACCATCTCACCCTT-GTACCGCTTCTCCCCC-AC
EW719177       --> CTGCACCATTCCGTATACCATCTCACCCTT-GTACCGCTTCTCCCCC-AC
FD547042       --> CTGCACCACTCCGTATACCATCTCACCCTT-GTACCGCTTCTCCCCC-AC
FD976191       --> CTGCACCATTCCGTATACCATCTCACCCTT-GTACCGCTTCTCCCCC-AC

               351    -    401
UN23038        --> AGAGTACAATGTAGAATTATCTCCAGTGGTGGCTAATTCCGTCAGATCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973810       <-- AGGGTACAATGTAGAATTATCTCCAGTGGTGGCTAATTCCGTCAGATCGT
EW713510       <-- AGAGTACAATGTAGAATTATCTCCAGTGGTGGCTAATTCCGTCAGATCGT
EV536420       <-- AGAGTACAATGTAGAATTATCTCCACTGGTGGCTAATTCCGTCAGATCGT
EW714365       <-- AGAGTACAATGTAGAATTATCTCCAGTGGTGGCTAATTCCGTCAGATCGT
EY905704       <-- AGAGTACAATGTAGAATTATCTCCAGTGGTGGCTAATTCCGTCAGATCGT
EW713509       <-- AGAGTACAATGTAGAATTATCTCCAGTGGTGGCTAATTCCGTCAGATCGT
FD980283       <-- AGAGTACAATGTAGAATTATCTCCAGTGGTGGCTAATTCCGTCAGATCGT
FD989552       <-- AGAGTACAATGTAGAATTATCTCCAGTGGTGGCTAATTCCGTCAGATCGT
EY950308       <-- AGAGTACAATGTAGAATTATCTCCAGTGGTGGCTAATTCCGTCAGATCGT
FD541825       <-- ....................CTCCACTGGTGGCTAATTCCGTCAGATCGT
FD557187       <-- ..........................................CAGATCGT
FD971412       <-- ...........................................AGATCGT
EX902584       <-- ..................................................
EY907453       <-- ..................................................
EW718626       --> AGAGTACAATGTAGAATTATCTCCAGTGGTGGCTAATTCCGTCAGATCGT
EY902075       --> AGAGTACAATGTAGAATTATCTCCAGTGGTGGCTAATTCCGTCAGATCGT
FD934918       --> AGAGTACAATGTAGAATTATCTCCAGTGGTGGCTAATTCCGTCAGATCGT
EW718366       --> AGAGTACAATGTAGAATTATCTCCAGTGGTGGCTAATTCCGTCAGATCGT
FD985319       --> AGAGTACAATGTAGAATTATCTCCAGTGGTGGCTAATTCCGTCAGATCGT
EW719177       --> AGAGTACAATGTAAAATTATCTCCAGTGGTGGCTAATTCCGTCAGATCGT
FD547042       --> AGAGTACAATGTAAAATTATCTCCAGTGGTGGCTAATTCCGTCAAATCGT
FD976191       --> AGAGTACAATGTAGAATTATCTCCAGTGGTGGCTAATTCCGTCAGATCGT

               401    -    451
UN23038        --> CAACGAGAATATTCCAAACTTTTATAAATCCGAGGGGGACTCCATTGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973810       <-- CAACGAGAATATTCCAAACTTTTATAAATCCGAGGGGGACTCCATTGTCT
EW713510       <-- CAACGAGAATATTCCAAACTTTCATAAATCCGAGGGAGACTCCATTGTCT
EV536420       <-- CAACGAGAATATTCCAAACTTTTATAAATGCGAGGGAGACTCCGTTGTCT
EW714365       <-- CAACGAGAATATTCCAAACTTTTATAAATCCGAGGGGGACTCCATTGTCT
EY905704       <-- CAACGAGAATATTCCAAACTTTTATAAATCCGAGGGGGACTCCATTGTCT
EW713509       <-- CAACGAGAATATTCCAAACTTTCATAAATCCGAGGGAGACTCCATTGTCT
FD980283       <-- CAACGAGAATATTCCAAACTTTTATAAATCCGAGGGGGACTCCATTGTCT
FD989552       <-- CAACGAGAATATTCCAAACTTTTATAAATCCGAGGGGGACTCTATTGTCT
EY950308       <-- CAACGAGAATACTCCAAACTTTTATAAATCCGAGGGGGACTCCATTGTCT
FD541825       <-- CAACGAGAATATTCCAAACTTTTATAAATGCGAGGGAGACTACGTTGTCT
FD557187       <-- CAACGAGAATATTCCAAACTTTTATAAATCCGAGGGGGACTCCATTGTCT
FD971412       <-- CAACGAGAATATTCCAAACTTTTATAAATGCGAGGGAGACTCCGTTGTCT
EX902584       <-- ..................................................
EY907453       <-- ..................................................
EW718626       --> CAACGAGAATATTCCAAACTTTCATAAATCCGAGGGAGACTCCATTGTCT
EY902075       --> CAACGAGAATATTCCAAACTTTTATAAATCCGAGGGGGACTCCATTGTCT
FD934918       --> CAACGAGAATATTCCAAACTTTTATAAATCCGAGGGAGACTCCATTGTCT
EW718366       --> CAACGAGAATATTCCAAACTTTCATAAATCCGAGGGAGACTCCATTGTCT
FD985319       --> CAACGAGAATATTCCAAACTTTTATAAATCCGAGGGGGACTCTATTGTCT
EW719177       --> CAACGAAAATATTCCAAACTTTTATAAATCCGAGGGGGACTCCATTGTCT
FD547042       --> CAACGAAAATATTCCAAACTTTTATAAATCCGAGGGGGACTCCATTGTCT
FD976191       --> CAACGAGAATATTCCAAACTTTTATAAATCCGAGGGGGACTCCATTGTCT

               451    -    501
UN23038        --> ACCACCTTCTTCGCGTTGGAAATACAAAAGTTATTGTCGTAATCGATCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973810       <-- ACCACCTTCTTCGCGTTGGAAATACAAAAGTTATTGTCGTAATCGATCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW713510       <-- ACCACCTTCTTCGCGTTGGAAATACAAAAGTTGTTGTCGTAATCGATCTG  Raphanus sativus var. oleiformis
EV536420       <-- ACCACCTTCTTAGCGTTGGTAATACAAAAGTTATTGTCGTAATCGATCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714365       <-- ACCACCTTCTTCGCGTTGGAAATACAAAAGTTATTGTCGTAATCGATCTG  Raphanus sativus var. oleiformis
EY905704       <-- ACCACCTTCTTCGCGTTGGAAATACAAAAGTTATTGTCGTAATCGATCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW713509       <-- ACCACCTTCTTCGCGTTGGAAATACAAAAGTTGTTGTCGTAATCGATCTG  Raphanus sativus var. oleiformis
FD980283       <-- ACCACCTTCTTCGCGTTGGAAATACAAAAGTTATTGTCGTAATCGATCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989552       <-- ACCACCTTCTTCGCGTTGGTAATACAAAAGTTATTGTCGTAATCGATCTG  Raphanus raphanistrum subsp. landra
EY950308       <-- ACCACCTTCTTCGCGTTGGAA-TACAAAAGTTATTGTCGTAATCGATCTG  Raphanus sativus cv Rat-Tail Radish #3870
FD541825       <-- ACCACCTTCTTAGCGTTGGTAATACAAAAGTTATTGTCGTAATCGATCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD557187       <-- ACCACCTTCTTCGCGTCGGTAATACAAAAGTTATTGTCGTAATCGATCTG  Raphanus raphanistrum subsp. landra
FD971412       <-- ACCACCTTCTTAGCGTTGGTAATACAAAAGTTATTGTCGTAATCGATCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX902584       <-- ........CTTCGCGTTGGAAATACAAAAGTTATTGTCGTAATCGATCTG  Raphanus sativus cv Rat-Tail Radish #3870
EY907453       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW718626       --> ACCACCTTCTTCGCGTTGGAAATACAAAAGTTGTTGTCGTAATCGATCTG  Raphanus sativus var. oleiformis
EY902075       --> ACCACCTTCTTCGCGTTGGAAATACAAAAGTTATTGTCGTAATCGATCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD934918       --> ACCACCTTCTTCGCGTTGGAAATACAAAAGTTATTGTCGTAATCGATCTG  Raphanus sativus var. oleiformis
EW718366       --> ACCACCTTCTTCGCGTTGGAAATACAAAAGTTGTTGTCGTAATCGATCTG  Raphanus sativus var. oleiformis
FD985319       --> ACCACCTTCTTCGCGTTGGTAATACAAAAGTTATTGTCGTAATCGATCTG  Raphanus raphanistrum subsp. landra
EW719177       --> ACCACCTTCTTCGCGTTGGAAATACAAAAGTTATTGTCGTAATCGATCTG  Raphanus sativus var. oleiformis
FD547042       --> ACCACCTTCTTCGCGTTGGAAATACAAAAGTTATTGTCGTAATCGATCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976191       --> ACCACCTTCTTCGCGTTGGAAATACAAAAGTTATTGTCGTAATCGATCTG  Raphanus raphanistrum subsp. raphanistrum (NY)

               501    -    551
UN23038        --> CCCAATAGAATATTTGGAATCCATCGAGAGAAGACATTGGTCATACCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973810       <-- CCCAATAGAATATTTGGAATCCATCGAGAGAAGACATTGGCCATACCATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW713510       <-- CCCAATAGAATATTTGGAATCCATCGAGAGAAGACATAGGTCATACCATA  Raphanus sativus var. oleiformis
EV536420       <-- CCCAATAGAATATTTGGAATCCATCGACAGAAGACATAGGTCATACCATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714365       <-- CCCAATAGAATATTTGGAATCCATTGAGAGAAGGCACTGGTCATACCATA  Raphanus sativus var. oleiformis
EY905704       <-- CCCAATAGAATATTTGGAATCCATCGAGAGAAGACATTGGTCATACCATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW713509       <-- CCCAATAGAATATTTGGAATCCATCGAGAGAAGACATAGGTCATACCATA  Raphanus sativus var. oleiformis
FD980283       <-- CCCAATAGAATATTTGGAATCCATCGAGAGAAGACATTGGTCATACCATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989552       <-- CCCAATAGAATATTTGGAATCCATCGAGAGAGGACATAGGTCATACCATA  Raphanus raphanistrum subsp. landra
EY950308       <-- CCCAATAGAATATTTGGAATCCATCGAGAGAAGACATTGGTCATACCATA  Raphanus sativus cv Rat-Tail Radish #3870
FD541825       <-- CCCAATAGAATATTTGGAATCCATCGACAGAAGACATAGGTCATACCATA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD557187       <-- CCCAATAGAATATTTGGAATCCATCGAGAGAAGACATAGGTCATACCATA  Raphanus raphanistrum subsp. landra
FD971412       <-- CCCAATAGAATATTTGGAATCCATCGACAGAAGACATAGGTCATACCATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX902584       <-- CCCAATAGAATATTTGGAATCCATCGAGAGAAGACATTGGTCATACCATA  Raphanus sativus cv Rat-Tail Radish #3870
EY907453       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW718626       --> CCCAATAGAATATTTGGAATCCATCGAGAGAAGACATAGGTCATACCATA  Raphanus sativus var. oleiformis
EY902075       --> CCCAATAGAATATTTGGAATCCATCGAGAGAAGACATTGGTCATACCATA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD934918       --> CCCAATAGAATATTTGGAATCCATCGAGAGAAGGCACTGGTCATACCATA  Raphanus sativus var. oleiformis
EW718366       --> CCCAATAGAATATTTGGAATCCATCGAGAGAAGACATAGGTCATACCATA  Raphanus sativus var. oleiformis
FD985319       --> CCCAATAGAATATTTGGAATCCATCGAGAGAGGACATAGGTCATACCATA  Raphanus raphanistrum subsp. landra
EW719177       --> CCCAATAAAATATTTGGAATCCATTGAGAGAAGGCACTGGTCATACCATA  Raphanus sativus var. oleiformis
FD547042       --> CCCAATAAAATATTTGGAATCCATCGAGAGAAAACATTGGTCATACCATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976191       --> CCCAATAGAATATTTGGAATCCATCGAGAGAAGACATTGGTCATACCATA  Raphanus raphanistrum subsp. raphanistrum (NY)

               551    -    601
UN23038        --> TTATTCTCCCCTTGTACCACGGACA-TCTCCTACGAAGCGCAGCGAGGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973810       <-- TTATTCTCCCCTTGTACCACGGACA-TCTCCTACGAAGCGCAGCGAGGGC
EW713510       <-- TTATTCTCCCCTTGTACCACGGACA-TCTCCTGCGAAGCGCAGCGAGGGC
EV536420       <-- TTATTCTCCCCTTGTACCACGGACA-TCTCTTACGAAGCGCCGCGAGGGC
EW714365       <-- TTATTCTCCCCTTGTACCACGGACA-TCTCCTACGAAGCGCAGCGAGGGC
EY905704       <-- TTATTCTCCCCTTGTACCACGGACA-TCTCCTACGAAGCGCAGCGAGGGC
EW713509       <-- TTATTCTCCCCTTGTACCACGGACA-TCTCCTGCGAAGCGCAGCGAGGGC
FD980283       <-- TTATTCTCCCCTTGTACCACGGACA-TCTCCTACGAAGCGCAGCGAGGGC
FD989552       <-- TTATTCTCCCCTTGTACCATGGACA-TCTCCTACGAAGCGCAGCGAGGGC
EY950308       <-- TTATTCTCCCCTTGTACCACGGACA-TCTCCTACGAAGCGCAGCGAGGGC
FD541825       <-- TTATTCTCCCCTTGTACCACGGACA-TCTCTTACGAAGCGCAGCGAGGGC
FD557187       <-- TTATTCTCCCCTTGTACCATGGACA-TCTCCTACGAAGCGCAGCGAGGGC
FD971412       <-- TTATTCTCCCCTTGTACCACGGACA-TCTCTTACGAAGCGCAGCGAGGGC
EX902584       <-- TTATTCTCCCCTTGTACCACGGACA-TCTCCTACGAAGCGTAGCGAGGGC
EY907453       <-- ..................................................
EW718626       --> TTATTCTCCCCTTGTACCACGGACA-TCTCCTGCGAAGCGCAGCGAGGGC
EY902075       --> TTATTCTCCCCTTGTACCACGGACA-TCTCCTACGAAGCGCAGCGAGGGC
FD934918       --> TTATTCTCCCCTTGTACCACGGACA-TCTCCTACGAAGCGCAGCGAGGGC
EW718366       --> TTATTCTCCCCTTGTACCACGGACA-TCTCCTGCGAAGCGCAGCGAGGGC
FD985319       --> TTATTCTCCCCTTGTACCATGGACAATCTCCTACGAAGCGCAGCGAGGGC
EW719177       --> TTATTCTCCCCTTGTACCACGGACA-TCTCCTACGAAGCGCAGCGAGGGC
FD547042       --> TTATTCTCCCCTTGTACCACGGACA-TCTCCTACGAA.............
FD976191       --> TTATTCTCCCCTTGTACCACGGACA-TCTCCTACGAAGCGCAGCGAGGGC

               601    -    651
UN23038        --> GGTGACAAAGCAGTCGTGGCACTTGGG-CCCGTAAGAGTCGCCGCGGCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973810       <-- GGTGACAAAGCAGTCGc.................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW713510       <-- GGTGACAAAGCAGTCGTGGCACTTGGG-CCCGTAAGAGTCGCCGCGGCAC  Raphanus sativus var. oleiformis
EV536420       <-- GGTGACAAAGCAGTCGTGGCACTTGGG-CCCGTAAGAGTCGCCGCGGCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714365       <-- GGTGACAAAGCAGTCGTGGCACTTGGG-CCCGTAAGAGTCGCCGCGGCAC  Raphanus sativus var. oleiformis
EY905704       <-- GGTGACAAAGCAGTCGTGGCACTTGGG-CCCGTAGGAGTCGCCGCGACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW713509       <-- GGTGACAAAGCAGTCGTGGCACTTGGG-CCCGTAAGAGTCGCCGCGGCAC  Raphanus sativus var. oleiformis
FD980283       <-- GGTGACAAAGCAGTCGTGGCACTTGGG-CCCGTAGGAGTCGCCGCAACAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989552       <-- GGTGACAAAGCAGTCGTGGCACTTGGG-CCCGTAAGAGTCGCCGCGGCAC  Raphanus raphanistrum subsp. landra
EY950308       <-- GGTGACAAAGCAGTCGTGGCACTTGGG-CCCGTAAGAGTCGCCGCGGCAC  Raphanus sativus cv Rat-Tail Radish #3870
FD541825       <-- GGAGACAAAGCAGTCGTGGCACTTGGG-CCCGTAAGAGTCGCCGCGGCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD557187       <-- GGTGACAAAGCAGTCGTGGCACTTGGG-CCCGTAAGAGTCGCCGCGGCAC  Raphanus raphanistrum subsp. landra
FD971412       <-- GGTGACAAAGCAGTCGTGGCACTTGAG-CCCGTAAGAGTCGCCGCGGCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX902584       <-- GGTGACAAAGCAGTCGTGGCACTTGGG-CCCGTAAGAGTCGCCGCGGCAC  Raphanus sativus cv Rat-Tail Radish #3870
EY907453       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW718626       --> GGTGACAAAGCAGTCGTGGCACTTGGG-CCCGTAAGAGTCGCCGCGGCAC  Raphanus sativus var. oleiformis
EY902075       --> GGTGACAAAGCAGTCGTGGCACTTGGG-CCCGTAGGAGTCGCCGCGACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD934918       --> GGTGACAAAGCAGTCGTGGCACTTGGG-CCCGTAAGAGTCGCCGCGGCAC  Raphanus sativus var. oleiformis
EW718366       --> GGTGACAAAGCAGTCGTGGCACTTGGG-CCCGTAAGAGTCGCCGCGGCAC  Raphanus sativus var. oleiformis
FD985319       --> GGTGACAAAGCAGTCGTGGCACTTGGGGCCCGTAAGAGTCGCCGCGGCAC  Raphanus raphanistrum subsp. landra
EW719177       --> GGTGACAAAGCAGTCGTGGCACTTGGG-CCCGTAAGA.............  Raphanus sativus var. oleiformis
FD547042       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976191       --> GGTGACAAAGCAGTCGTGGCACTTGGG-CCCGTAGGAGTCGCCGCAACAC  Raphanus raphanistrum subsp. raphanistrum (NY)

               651    -    701
UN23038        --> TGGAGGACAGCGGTAAAAGTAGAATCGCCAAAAAAGTCGTAACCTTTAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973810       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW713510       <-- TGGAGGACAGCGGTAAAAGTAGAATCGCCAAAAAAGTCGTAACCTTTAAT  Raphanus sativus var. oleiformis
EV536420       <-- TGGAGGACAGCGGTAAAAGTAGAATCGCCAAAAAAGTCGTAACCTTTAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714365       <-- TGGAGGACAGCGGTAAAGGTAGAATCGCCAAAAAAGTCGTAACCTATAAT  Raphanus sativus var. oleiformis
EY905704       <-- TGGAGGACAGCGGTAAAATTAGAATCGCCAAAAAAGTCGTAACCTCTAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW713509       <-- TGGAGGACAGCGGTAAAAGTAGAATCGCCAAAAAAGTCGTAACCTTTAAT  Raphanus sativus var. oleiformis
FD980283       <-- TGGAGGACAGCGGTAAAATTAGAATCGCCAAAAAAGTCGTAACCTCTAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989552       <-- TGGAGGACAGCGGTAAAAGTAGAATCGCCAAAAAAGTCGTAACCTTTAAT  Raphanus raphanistrum subsp. landra
EY950308       <-- TGGAGGACAGCGGTAAAAGTAGAATCGCCAAAAAAGTCGTAACCTATAAT  Raphanus sativus cv Rat-Tail Radish #3870
FD541825       <-- TGGAGGACAGCGGTAAAAGTAGAATCGCCAAAAAAGTCGTAACCTTTAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD557187       <-- TGGAGGACAGCGGTAAAAGTAGAATCGCCAAAAAAGTCGTAACCTTTAAT  Raphanus raphanistrum subsp. landra
FD971412       <-- TGGAGGACAGCGGTAAAAGTAGAATCGCCAAAAAAGTCGTAACCTTTAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX902584       <-- TGGAGGACAGCGGTAAAAGTAGAATCGCCAAAAAAGTCGTAACCTATAAT  Raphanus sativus cv Rat-Tail Radish #3870
EY907453       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW718626       --> TGGAGGACAGCGGTAAAAGTAGAATCGCCAAAAAAGTCGTAACCTTTAAT  Raphanus sativus var. oleiformis
EY902075       --> TGGAGGACAGCGGTAAAATTAGAATCGCCAAAAAAGTCGTAACCTCTAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD934918       --> TGGAGGACAGCGGT....................................  Raphanus sativus var. oleiformis
EW718366       --> TGGAGGACAGCGGTAAAAGTAGAATCGCCAAAAAAGTCGTAACCTTTAAT  Raphanus sativus var. oleiformis
FD985319       --> TGGA..............................................  Raphanus raphanistrum subsp. landra
EW719177       --> ..................................................  Raphanus sativus var. oleiformis
FD547042       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976191       --> TGGAGGACAGCGGTAAAATTAGAATCGCCAAAAAAGTCGTAACCTCTAAT  Raphanus raphanistrum subsp. raphanistrum (NY)

               701    -    751
UN23038        --> ACTGTTTTTATAGAACATTTTCATGATATTTTTTAAACGTTTCTCGTACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973810       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW713510       <-- ACTGTTTTTATCGAACATTTTCATGATATTTTTTAAACGTTTCTCGTACT  Raphanus sativus var. oleiformis
EV536420       <-- ACTGTTTTTATTGAACATTTTCATGATATTTTTTAAACGTTTCTCGTACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714365       <-- ACTGTTTTTATAGAACATTTTCATGATATTTTTTAAACGTTTCTCGTACT  Raphanus sativus var. oleiformis
EY905704       <-- ACTGTTTTTATAGAACATTTTCATGATATTTTTTGAACGTTTCTCGTACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW713509       <-- ACTGTTTTTATCGAACATTTTCATGATATTTTTTAAACGTTTCTCGTACT  Raphanus sativus var. oleiformis
FD980283       <-- ACTGTTTTTATAGAACATTTTCATGATATTTTTTGAACGTTTCTCGTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989552       <-- ACTGTTTTTATAGAACATTTTCATGATATTTTTTAAACGTTTCTCGTACT  Raphanus raphanistrum subsp. landra
EY950308       <-- ACTGTTTTTATAGAACATTTTCATGATACTTTTTAAACGTTTCTCGTACT  Raphanus sativus cv Rat-Tail Radish #3870
FD541825       <-- ACTGTTTTTATTGAACATTTTCATGATATTTTTTAAACGTTTCTCGTACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD557187       <-- ACTGTTTTTATAGAACATTTTCATGATATTTTTTAAACGTTTCTCGTACT  Raphanus raphanistrum subsp. landra
FD971412       <-- ACTGTTTTTATTGAACATTTTCATGATATTTTTTAAACGTTTCTCGTACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX902584       <-- ACTGTTTTTATAGAACATTTTCATGATACTTTTTAAACGTTTCTCGTACT  Raphanus sativus cv Rat-Tail Radish #3870
EY907453       <-- ........................................TTCTCGTACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW718626       --> ACTGTTTTTATCGAACATTTTCATGATATTTTTTAAACGTTTCTCGTACT  Raphanus sativus var. oleiformis
EY902075       --> ACTGTTTTTATAGAACATTTTCATGATATTTTTTGAAC............  Raphanus raphanistrum subsp. raphanistrum (MS)
FD934918       --> ..................................................  Raphanus sativus var. oleiformis
EW718366       --> ACTGTTTTTATCGAACATTTTCATGATATTTTTTAAACGTTTCTCGTACT  Raphanus sativus var. oleiformis
FD985319       --> ..................................................  Raphanus raphanistrum subsp. landra
EW719177       --> ..................................................  Raphanus sativus var. oleiformis
FD547042       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976191       --> ACTGTTTTTATAGAACATTTTCATGATATTTTTTGAACGTTTCTCGTACT  Raphanus raphanistrum subsp. raphanistrum (NY)

               751    -    801
UN23038        --> CACTTCCCGTCTTGTATTTTCCCTGACTAACCAAACATGTGTGGCTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973810       <-- ..................................................
EW713510       <-- CACTTCCCGTCTTGTATTTTCCCTGACTAACCAAACATGTGTGGCTGAGA
EV536420       <-- CACTTCCCGTCTTGTATTTTCCCTGACTAACCAAACATGTGTGGAGGAGA
EW714365       <-- CACTTCCCGTCTTGTATTTTCCCTGACTAACCAAACATGTGTGGCTGAGA
EY905704       <-- CACTTCCCGTCTTGTATTTTCCCTGACTAACCAAACATGTGTGGCTGAGA
EW713509       <-- CACTTCCCGTCTTGTATTTTCCCTGACTAACCAAACATGTGTGGCTGAGA
FD980283       <-- CACTTCCCGTCTTGTATTTTCCCTGACTAACCAAACATGTGTGGCTGAGA
FD989552       <-- CACTTCCCGTCTTGTATTTTCCCTGACTAACCAAACATGTGTGGCTGAGA
EY950308       <-- CACTTCCCGTCTTGTATTTTCC-TGACTAACCAAACATGTGTGGCTGAGA
FD541825       <-- CACTTCCCGTCTTGTATTTTCCCTGACTAACCAAACATGTGTGGCGGAGA
FD557187       <-- CACTTCCCGTCTTGTATTTTCCCTGACTAACCAAACATGTGTGGCTGAGA
FD971412       <-- CACTTCCCGTCTTGTATTTTCCCTGACTAACCAAACATGTGTGGCGGAGA
EX902584       <-- CACTTCCCGTCTTGTATTTTCCCTGACTAACCAAACATGTGTGGCTGAGA
EY907453       <-- CACTTCCCGTCTTGTATTTTCCCTGACTAACCAAACATGTGTGG-TGAGA
EW718626       --> CACTTCCCGTCTTGTATTTTCCCTGACTAACCAAACATGT..........
EY902075       --> ..................................................
FD934918       --> ..................................................
EW718366       --> CACTTCCCGTCTTGTATTTTCCCTGACTAACCAAACATGTGTGGCTGAGA
FD985319       --> ..................................................
EW719177       --> ..................................................
FD547042       --> ..................................................
FD976191       --> CACTTCCCGTCTTGTATTTTCCCTGACTAACCAAACATGTGTGGCTGAGA

               801    -    851
UN23038        --> TACTCATTGGTCGTGTTTACGGACAATTCGCTGTTTATAAGGAGTAGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973810       <-- ..................................................
EW713510       <-- TACTCATTGGTCGTGTTTACGGAGAATTCGCTGTTTATAAGGAGTAGTTG
EV536420       <-- TACTCATTGGTCGTGTTTACGGACAATTCGCTGTTTATAAGGAGTAGTTG
EW714365       <-- TACTCATTGGTCGTGTTTACGGACAATTCGCTGTTTATAAGGAGTAGTTG
EY905704       <-- TACTCATTGGTCGTGTTTACGGACAATTCGCTGTTTATAAGGAGTAGTTG
EW713509       <-- TACTCATTGGTCGTGTTTACGGAGAATTCGCTGTTTATAAGGAGTAGTTG
FD980283       <-- TACTCATTGGTCGTGTTTACGGACAATCCGCTGTTTATAAGGAGTAGTTG
FD989552       <-- TACTCATTGGTCGTGTTTACGGACAATTCGCTGTTTATAAGGAGTAGTTG
EY950308       <-- TACTCATTGGTTGTGTTTACGGACAATTCGCTGTTTATAAGGAGTAGTTG
FD541825       <-- TACTCATTGGTCGTGTTTACGGACAATTCGCTGTTTATAAGGAGTAGTTG
FD557187       <-- TACTCATTGGTCGTGTTTACGGACAATTCGCTGTTTATAAGGAGTAGTTG
FD971412       <-- TACTCATTGGTCGTGTTTACGGACAATTCGCCGTTTATAAGGAGTAGTTG
EX902584       <-- TACTCATTGGTTGTGTTTACGGACAATTCGCTGTTTATAAGGAGTAGTTG
EY907453       <-- TACTCATTGGTCGTGTTTACGGACAATTCGCTGTTTATAAGGAGTAGTTG
EW718626       --> ..................................................
EY902075       --> ..................................................
FD934918       --> ..................................................
EW718366       --> TACTCATTGGTCGTGTT.................................
FD985319       --> ..................................................
EW719177       --> ..................................................
FD547042       --> ..................................................
FD976191       --> TACTCATTGGTCGTGTT.................................

               851    -    901
UN23038        --> TATGGCAAAGATATAGATCAAAATGAGGTGTTTTGATACAGACGATGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973810       <-- ..................................................
EW713510       <-- TATGGCAAAGATATAGATCAAAATGAGGTGTTTTGATACAGACGATGAAG
EV536420       <-- TATGGCAAAGATATAGATCAAAATGAGGTGTTTTGATACAGACGATGAAG
EW714365       <-- TATGGCAAAGATATAGATCAAAATGAGGTGTTTTGATACAGACGATGAAG
EY905704       <-- TATGGCAAAGATATAGATCAAAATGAGGTGTTTTGATACAGACGATGAAG
EW713509       <-- TATGGCAAAGATATAGATCAAAATGAGGTGTTTTGATACAGACGATGAAG
FD980283       <-- TATGGCAAAGATATAGATCAAAATGAGGTGTTCTGATACAGACGATGAAG
FD989552       <-- TATGGCAAAGATATAGATCAAAATGAGGTGTTTTGATACAGACGATGAAG
EY950308       <-- TATGGCAAAGATATAGATCAAAATGAGGTGTCTTGATACAGACGATGAAG
FD541825       <-- TATGGCAAAGATATAGATCAAAATGAGGTGTTTTGATACAGACGATGAAG
FD557187       <-- TATGGCAAAGATATAGATCAAAATGAGGTGTTTTGATACAGACGATGAAG
FD971412       <-- TATGGCAAAGATATAGATCAAAATGAGGTGTTTTGATACAGACGATGAAG
EX902584       <-- TATGGCAAAGATATAGATCAAAATGAGGTGTCTTGATACAGACGATGAAG
EY907453       <-- TATGGCAAAGATATAGATCAAAATGAGGTGTTTTGATACAGACGATGAAG
EW718626       --> ..................................................
EY902075       --> ..................................................
FD934918       --> ..................................................
EW718366       --> ..................................................
FD985319       --> ..................................................
EW719177       --> ..................................................
FD547042       --> ..................................................
FD976191       --> ..................................................

               901    -    951
UN23038        --> AGTACATTACTTGAATTATTTTTGTCAAAGGTTCTTTTCTATAGATGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973810       <-- ..................................................
EW713510       <-- AGTACATTACTTGAATTATTTTTGTCAAAGGTTCTTTTCTATAGATGGTT
EV536420       <-- AGTACATTACTTGAATTATTTTTGTCAAAGGTTCTTTTCTATAGATGGTT
EW714365       <-- AGTACATTACTTGAATTATTTTTGTCAAAGGTTCTTTTCTATAGATGGTT
EY905704       <-- AGTACATTACTTGAATAATTTTTGTCAAAAGTTCTTTTCTATAGATGGTT
EW713509       <-- AGTACATTACTTGAATTATTTTTGTCAAAGGTTCTTTTCTATAGATGGTT
FD980283       <-- AGTACATTACTTGAATAATTTTTGTCAAAAGTTCTTTTCTATAAATGGTT
FD989552       <-- AGTACATTACTTGAATTATTTTTGTCGAAGGTTCTTTTCTATAGATGGTT
EY950308       <-- AGTACATTACTTGAATTATTTTTGTCAAAGGTTCTTTTCTATAGATGGTT
FD541825       <-- AGTACATTACTTGAATTATTTTTGTCAAAGGTTCTTTTCTATAGATGGTT
FD557187       <-- AGTACATTACTTGAATTATTTTTGTCAAAGGTTCTTTTCTATAGATGGTT
FD971412       <-- AGTACATTACTTGAATTATTTTTGTCAAAGATTCTTTTCTATAGATGGTT
EX902584       <-- AGTACATTACTTGAATTATTTTTGTCAAAGGTTCTTTTCTATAGATGGTT
EY907453       <-- AGTACATTACTTGAATAATTTTTGTCAAAAGTTCTTTTCTATAGATGGTT
EW718626       --> ..................................................
EY902075       --> ..................................................
FD934918       --> ..................................................
EW718366       --> ..................................................
FD985319       --> ..................................................
EW719177       --> ..................................................
FD547042       --> ..................................................
FD976191       --> ..................................................

               951    -   1001
UN23038        --> AGTTGAGATTGA--TGT--TCATGGACGAGCCTCAGACGGATTTGGATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973810       <-- ..................................................
EW713510       <-- AGTTGAGATTGA--TGT.................................
EV536420       <-- AGTTGAGATTGA--TGT--TCATcc.........................
EW714365       <-- AGTTGAGATTGA--TGT--TCATcc.........................
EY905704       <-- Aat...............................................
EW713509       <-- AGTTGAGATTGA--TGT--TCATccccc......................
FD980283       <-- AGTTGAGATTGACGTGT--TCATGGACcc.....................
FD989552       <-- AGTTGAGATTGA--TGT--TCATcc.........................
EY950308       <-- AGTTGAGATTGA--TGT--TCACGGACcc.....................
FD541825       <-- AGTTGAGATTGA--TGT--TCATGGACGAGCCTCAGACGGATTTGGATAC
FD557187       <-- AGTTGAGATTGA--TGT--TCATGGACcc.....................
FD971412       <-- AGTTGAGATTGA--TGT--TCATcc.........................
EX902584       <-- AGTTGAGATTGA--TGT--TCACGGACGAGCCTCAGACGGATTTGGATAC
EY907453       <-- AATTGAGATTGA--TGTGTTCATGGACGAcc...................
EW718626       --> ..................................................
EY902075       --> ..................................................
FD934918       --> ..................................................
EW718366       --> ..................................................
FD985319       --> ..................................................
EW719177       --> ..................................................
FD547042       --> ..................................................
FD976191       --> ..................................................

               1001   -   1051
UN23038        --> TGAATTGATATATGGTTATTTTTT-GGTTATCCAATACGAAATTTGTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973810       <-- ..................................................
EW713510       <-- ..................................................
EV536420       <-- ..................................................
EW714365       <-- ..................................................
EY905704       <-- ..................................................
EW713509       <-- ..................................................
FD980283       <-- ..................................................
FD989552       <-- ..................................................
EY950308       <-- ..................................................
FD541825       <-- TGAATTGATATATGGTTATTTTTTTGGTTATCCAATACGAAATTTGTTTG
FD557187       <-- ..................................................
FD971412       <-- ..................................................
EX902584       <-- TGAATTGATATATGGCTATTTTTT-GGTTATCCAATACGAAATTTGTTTG
EY907453       <-- ..................................................
EW718626       --> ..................................................
EY902075       --> ..................................................
FD934918       --> ..................................................
EW718366       --> ..................................................
FD985319       --> ..................................................
EW719177       --> ..................................................
FD547042       --> ..................................................
FD976191       --> ..................................................

               1051   -   1101
UN23038        --> AAAAGGTCAGTTTGTTAGAAAAAAAATGTTACACTTTGTAAGGACAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD973810       <-- ..................................................
EW713510       <-- ..................................................
EV536420       <-- ..................................................
EW714365       <-- ..................................................
EY905704       <-- ..................................................
EW713509       <-- ..................................................
FD980283       <-- ..................................................
FD989552       <-- ..................................................
EY950308       <-- ..................................................
FD541825       <-- AAAAGGTCccc.......................................
FD557187       <-- ..................................................
FD971412       <-- ..................................................
EX902584       <-- AAAAGGTCAGTTTGTTAGAAAAAAAATGTTACACTTTGTAAGGACAGGAG
EY907453       <-- ..................................................
EW718626       --> ..................................................
EY902075       --> ..................................................
FD934918       --> ..................................................
EW718366       --> ..................................................
FD985319       --> ..................................................
EW719177       --> ..................................................
FD547042       --> ..................................................
FD976191       --> ..................................................

               1101   -   1151
UN23038        --> AGAAGAGTTGAAGGTTCC
                   ~~~~~~~~~~~~~~~~~~
FD973810       <-- ..................
EW713510       <-- ..................
EV536420       <-- ..................
EW714365       <-- ..................
EY905704       <-- ..................
EW713509       <-- ..................
FD980283       <-- ..................
FD989552       <-- ..................
EY950308       <-- ..................
FD541825       <-- ..................
FD557187       <-- ..................
FD971412       <-- ..................
EX902584       <-- AGAAGAGTTGAAGGTTCC
EY907453       <-- ..................
EW718626       --> ..................
EY902075       --> ..................
FD934918       --> ..................
EW718366       --> ..................
FD985319       --> ..................
EW719177       --> ..................
FD547042       --> ..................
FD976191       --> ..................