1      -     51
UN23040        --> GGCTCGTACAATACACATAATATACTTTCAAATTAAAAAAAAAAAA-GAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531650       <-- GGCTCGTACAATACACATAATATACTTTCAAATTTAAAAAAAAA------
EX767754       <-- ...ggGTACAATACACATAATATACTTTCAAATTTAAAAAAAA--A-GAA
EX893045       <-- ...ggGTACAATACACATAATATACTTTCAAATTAAAAAAAGAAAA-GAA
EY902582       <-- ...ggGTACAATACACATAATATACTTTCAAATTAAAAAAAAAAA--GAA
EY904514       <-- ...ggGTACAATACACATAATATACTTTCAAATTAAAAAAAAAAA--GAA
EY920042       <-- ...ggGTACAATACACATAATATACTTTCAAATTAAAAAAAAAAAAAGAA
EY920387       <-- ...ggGTACAATACACATAATATACTTTCAAATTAAAAAAAAAAAAAGAA
FD538084       <-- ...ggGTACAATACACATAATATACTTTCAAATTAAAAAAAAAAAA-GAA
FD967090       <-- ...ggGTACAATACACATAATATACTTTCAAATTAAAAAAAAAAAA-GAA
FD976367       <-- .ggtgGTACAATACACATAATATACTTTCAAATTAAAAAAAAAAAA-GAA
EW721812       <-- ......gACAATACACATAATATACTTTCAAATTAAAAAAAAAA----AA
FD554084       <-- ...ggaaACAATACACATAACATACCTTCAAATTAAAAAAAA--AC-GAA
EV573563       <-- ........gAATACACATAATATACTTTCAAATTAAAAAAAAAAAA-GAA
FD935640       <-- .........AATACACATAATATACTTTCAAATTAAAAAAAAAAAA--AA
FD950571       <-- ............ggACATAATATACTTTCAAATTAAAAA----AAA-GAA
FD942928       <-- ..................................................
FD580977       <-- ..................................................
EV527391       --> GGCTCGTACAATACACATAATATACTTTCAAATTTAAAAAAAAAAA-GA-
FD939546       --> .ggTCGTACAATACACATAATATACTTTCAAATTAAAAAAAAAAAA--AA
EV536241       --> ...ggGTACAATACACATAATATACTTTCAAATTAAAAAAAAAAAA-GAA
EW717111       --> ...ggGTACAATACACATAATATACTTTCAAATTAAAAAAAGAAAA-GAA
EX746218       --> ...ggGTACAATACACATAATATACTTTCAAATTTTAAGAAAAAAA----
EX889280       --> ...ggGTACAATACACATAATATACTTTCAAATTAAAAAAAGAAAA-GAA
EY906399       --> ..ggaGTACAATACACATAATATACTTTCAAATTAAAAAAAAAAA--GAA
EY908895       --> ...ggGTACAATACACATAATATACTTTCAAATTAAAAAAAAAAA--GAA
EY924383       --> ...ggGTACAATACACATAATATACTTTCAAATTAAAAAAAAAAAAAGAA
FD541897       --> ...ggGTACAATACACATAATATACTTTCAAATTAAAAAAAAAAAA-GAA
FD970820       --> ...ggGTACAATACACATAATATACTTTCAAATTAAAAAAAAAAAA-GAA
FD973627       --> ...ggGTACAATACACATAATATACTTTCAAATTAAAAAAAAAAAA-GAA
FD980489       --> .ggtgGTACAATACACATAATATACTTTCAAATTAAAAAAAAAAAA-GAA
EW716476       --> ......gACAATACACATAATATACTTTCAAATTAAAAAAAAAAAA----
FD558123       --> ...ggaaACAATACACATAACATACCTTCAAATTAAAAAAAAA--C-GAA
FD576491       --> .....ggACAATACACATAATATACTTTCAAATTAAAAAAAAA----GAA
EV568947       --> ........gAATACACATAATATACTTTCAAATTAAAAAAAAAAAA-GAA
FD954287       --> ............ggACATAATATACTTTCAAATTAAAAAAAA-----GAA
FD946896       --> ..................................................
EY924780       --> ..................................................
EV527860       --> ..................................................
FD564566       --> ..................................................

               51     -    101
UN23040        --> AAGAGAAGAAGTAAAAAA-TTAAAATATAGCATGGCTAAGTTTGCTTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531650       <-- AAGAGAAGAAGTAAAAAA-TTAAAATATAGCATGGCTAAGTTTGCTTCCA  Raphanus raphanistrum subsp. maritimus
EX767754       <-- AAGAGAAGAAGTAAAAAAATTAAAATATAGCATGGCTAAGTTTGCTTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893045       <-- AAGAGAAGAAGTAAAAAA-TTAAAATATAGCATGGCTAAGTTTGCTTCCA  Raphanus sativus var. oleiformis
EY902582       <-- AAGAGAAGAAGTAAAAAA-TTAAAATATAGCATGGCTAAGTTTGCTTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904514       <-- AAGAGAAGAAGTAAAAAAATTAAAATATAGCATGGCTAAGTTTGCTTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920042       <-- AAGAGAAGAAGTAAAAAA-GTAAAATATAGTATGGCTAAGTTTGCTTCCA  Raphanus raphanistrum subsp. landra
EY920387       <-- AAGAGAAGAAGTAAAAAA-GTAAAATATAGTATGGCTAAGTTTGCTTCCA  Raphanus raphanistrum subsp. landra
FD538084       <-- AAGAGAAGAAGTAAAAAA-TTAAAATATAGCATGGCTAAGTTTGCTTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967090       <-- AAGAGAAGAAGTAAAAAA-TTAAAATATAGCATGGCTAAGTTTGCTTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976367       <-- AAGAGAAGAATTAAAAAA-GTAAAATATAGCATGGCTAAGTTTGCTTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW721812       <-- AAGAGAAGAAGTAAAAAA-TTAAAATATAGCATGGCTAAGTTTGCTTCCA  Raphanus sativus var. oleiformis
FD554084       <-- AAGAAAAGAAGTAAAAAA-GTAAAATATAGCATGGCTAAGTTTGCTTCCA  Raphanus raphanistrum subsp. landra
EV573563       <-- AAGAGAAGAAGTAAAAAA-GTAAAATATAGTATGGCTAAGTTTGCTTCCA  Raphanus raphanistrum subsp. landra
FD935640       <-- AAGAGAAAAATTAAAAAA-GTAAAATATAGCATGGCTAAGTTTGCTTCCA  Raphanus sativus var. oleiformis
FD950571       <-- AAGAGAAGAAGTAAAAAA-GTAAAATATAGCATGGCTAAGTTTGCTTCCA  Raphanus sativus cv Rat-Tail Radish #3870
FD942928       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD580977       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV527391       --> ----GAAGAAGTAAAAAA-TTAAAATATAGCATGGCTAAGTTTGCTTCCA  Raphanus raphanistrum subsp. maritimus
FD939546       --> AAGAGAAAAATTAAAAAA-GTAAAATATAGCATGGCTAAGTTTGCTTCCA  Raphanus sativus var. oleiformis
EV536241       --> AAGAGAAGAAGTAAAAAA-TTAAAATATAGCATGGCTAAGTTTGCTTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717111       --> AAGAGAAGAAGTAAAAAA-TTAAAATATAGCATGGCTAAGTTTGCTTCCA  Raphanus sativus var. oleiformis
EX746218       --> AAGAGAAGAAGTAAAAAA-TTAAAATATAGCATGGCTAAGTTTGCTTCCA  Raphanus raphanistrum subsp. maritimus
EX889280       --> AAGAGAAGAAGTAAAAAA-TTAAAATATAGCATGGCTAAGTTTGCTTCCA  Raphanus sativus var. oleiformis
EY906399       --> AAGAGAAGAAGTAAAAAA-TTAAAATATAGCATGGCTAAGTTTGCTTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908895       --> AAGAGAAGAAGTAAAAAAATTAAAATATAGCATGGCTAAGTTTGCTTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924383       --> AAGAGAAGAAGTAAAAAA-GTAAAATATAGTATGGCTAAGTTTGCTTCCA  Raphanus raphanistrum subsp. landra
FD541897       --> AAGAGAAGAAGTAAAAAA-TTAAAATATAGCATGGCTAAGTTTGCTTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970820       --> AAGAGAAGAAGTAAAAAA-TTAAAATATAGCATGGCTAAGTTTGCTTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973627       --> AAGAGAAGAAGTAAAAAA-TTAAAATATAGCATGGCTAAGTTTGCTTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980489       --> AAGAGAAGAATTAAAAAA-GTAAAATATAGCATGGCTAAGTTTGCTTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716476       --> AAGAGAAGAAGTAAAAAA-TTAAAATATAGCATGGCTAAGTTTGCTTCCA  Raphanus sativus var. oleiformis
FD558123       --> AAGAAAAGAAGTAAAAAA-GTAAAATATAGCATGGCTAAGTTTGCTTCCA  Raphanus raphanistrum subsp. landra
FD576491       --> AAGAGAAGAAGTAAAAAA-GTAAAATATAACATGGCTAAGTCTGCTTCCA  Raphanus sativus cv Rat-Tail Radish #3870
EV568947       --> AAGAGAAGAAGTAAAAAA-GTAAAATATAGTATGGCTAAGTTTGCTTCCA  Raphanus raphanistrum subsp. landra
FD954287       --> AAGAGAAGAAGTAAAAAA-GTAAAATATAGCATGGCTAAGTTTGCTTCCA  Raphanus sativus cv Rat-Tail Radish #3870
FD946896       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY924780       --> ..................................................  Raphanus raphanistrum subsp. landra
EV527860       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD564566       --> ..................................................  Raphanus sativus var. oleiformis

               101    -    151
UN23040        --> TCATCACCTTCCTCTTCGTTGTTCTTATTATCTTTTCTGCTTTTGAAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531650       <-- TCATCACCTTCCTCTTAGTTGTTCTTATTATCTTTTCTGCTTTTGAAGTA  Raphanus raphanistrum subsp. maritimus
EX767754       <-- TCATCACCTTCCTCTTCGTTGTTCTTATTATCTTTTCTGCTTTTGAAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893045       <-- TCATCACCTTCCTCTTCCTTGTTCTTATTATCTTTTCTGCTTTTGAAGCA  Raphanus sativus var. oleiformis
EY902582       <-- TCATCACCTTCCTCTTCCTTGTTCTTATTATCTTTTCTGCTTTTGAAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904514       <-- TCATCACCTTCCTCTTCCTTGTTCTTATTATCTTTTCTGCTTTTGAAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920042       <-- TCATCACCTTCCTCTTCGTTGTTCTTATTATCTTTTCTGCTTTTGAAGCA  Raphanus raphanistrum subsp. landra
EY920387       <-- TCATCACCTTCCTCTTCGTTGTTCTTATTATCTTTTCTGCTTTTGAAGCA  Raphanus raphanistrum subsp. landra
FD538084       <-- TCATCACCTTCCTCTTCCTTGTTTTTATTATCTTTTCTGCTTTTGAAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967090       <-- TCATCACCTTCCTCTTCCTTGTTCTTATTATCTTTTCTGCTTTTGAAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976367       <-- TCATCACCTTCCTCTTCGCTGTTCTTATTATATTTTCTGCTTTTGAAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW721812       <-- TCATCACCTTCCTCTTCCTTGTTCTTATTATCTTTTCTGCTTTTGAAGCA  Raphanus sativus var. oleiformis
FD554084       <-- TCATCACCTTCCTCTTCGTTGTTCTTATTATCTTTTCTGCTTTTGAAGCA  Raphanus raphanistrum subsp. landra
EV573563       <-- TCATCCCCTTCCTCTTCGTTGTTCTTATTATCTTTTCTGCTTTTGAAGCA  Raphanus raphanistrum subsp. landra
FD935640       <-- TCATCACCTTCCTCTTCGTTGTTCTTATTATATTTTCTGCTTTTGAAGCA  Raphanus sativus var. oleiformis
FD950571       <-- TCATCACCTTCCTCTTCGTTGTTCTTATTATCTTTTCTGCTTTTGAAGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD942928       <-- ...ggACCTTCCTCTTCGTTGTTCTTATTATATTTTCTGCTTTTGAAGCA  Raphanus sativus cv Early Scarlet Globe
FD580977       <-- .......CTTCCTCTTCGTTGTTCTTATTATCTTTTCTGCTTTTGAAGCA  Raphanus sativus cv Rat-Tail Radish #3870
EV527391       --> TCATCACCTTCCTCTTAGTTGTTCTTATTATCTTTTCTGCTTTTGAAGTA  Raphanus raphanistrum subsp. maritimus
FD939546       --> TCATCACCTTCCTCTTCGTTGTTCTTATTATATTTTCTGCTTTTGAAGCA  Raphanus sativus var. oleiformis
EV536241       --> TCATCACCTTCCTCTTCCTTGTTCTTATTATCTTTTCTGCTTTTGAAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717111       --> TCATCACCTTCCTCTTCCTTGTTCTTATTATCTTTTCTGCTTTTGAAGCA  Raphanus sativus var. oleiformis
EX746218       --> TCATCACCTTCCTCTTAGTTGTTCTTATTATCTTTTCTGCTTTTGAAGCA  Raphanus raphanistrum subsp. maritimus
EX889280       --> TCATCACCTTCCTCTTCCTTGTTCTTATTATCTTTTCTGCTTTTGAAGCA  Raphanus sativus var. oleiformis
EY906399       --> TCATCACCTTCCTCTTCCTTGTTCTTATTATCTTTTCTGCTTTTGAAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908895       --> TCATCACCTTCCTCTTCCTTGTTCTTATTATCTTTTCTGCTTTTGAAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924383       --> TCATCACCTTCCTCTTCGTTGTTCTTATTATCTTTTCTGCTTTTGAAGCA  Raphanus raphanistrum subsp. landra
FD541897       --> TCATCACCTTCCTCTTCCTTGTTCTTATTATCTTTTCTGCTTTTGAAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970820       --> TCATCACCTTCCTCTTCCTTGTTCTTATTATCTTTTCTGCTTTTGAAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973627       --> TCATCACCTTCCTCTTCCTTGTTCTTATTATCTTTTCTGCTTTTG---CA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980489       --> TCATCACCTTCCTCTTCGCTGTTCTTATTATATTTTCTGCTTTTGAAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716476       --> TCATCACCTTCCTCTTCCTTGTTCTTATTATCTTTTCTGCTTTTGAAGCA  Raphanus sativus var. oleiformis
FD558123       --> TCATCACCTTCCTCTTCGTTGTTCTTATTATCTTTTCTGCTTTTGAAGCA  Raphanus raphanistrum subsp. landra
FD576491       --> TCATCACCTTCCTCTTCGTTGTTCTTATTATCTTTTCTGCTTTTGAAGCA  Raphanus sativus cv Rat-Tail Radish #3870
EV568947       --> TCATCACCTTCCTCTTCGTTGTTCTTATTATCTTTTCTGCTTTTGAAGCA  Raphanus raphanistrum subsp. landra
FD954287       --> TCATCACCTTCCTCTTCGTTGTTCTTATTATCTTTTCTGCTTTTGAAGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD946896       --> ...ggACCTTCCTCTTCGTTGTTCTTATTATATTTTCTGCTTTTGAAGCA  Raphanus sativus cv Early Scarlet Globe
EY924780       --> .......................................CTTTTGAAGCA  Raphanus raphanistrum subsp. landra
EV527860       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD564566       --> ..................................................  Raphanus sativus var. oleiformis

               151    -    201
UN23040        --> CCAACAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531650       <-- CCAACAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGTCTAATTCTGG
EX767754       <-- CCAACAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
EX893045       <-- CCAACAATTGTGGAAGGGCAGAAGTCGTGCAAGAGGCATCC-AATTCTGG
EY902582       <-- CCA-CAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGTCTAATTCTGG
EY904514       <-- CCAACAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
EY920042       <-- CCAACAATTGTGGAAGCGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
EY920387       <-- CCAACAATTGTGGAAGCGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
FD538084       <-- CCAACAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGCCTAATTTTGG
FD967090       <-- CCAACAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
FD976367       <-- CCAACAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
EW721812       <-- CCAACAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
FD554084       <-- CCAACAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
EV573563       <-- CCAACAATTGTGGAAGCGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
FD935640       <-- CCAACAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
FD950571       <-- CCAACAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
FD942928       <-- CCAACAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
FD580977       <-- CCAACAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
EV527391       --> CCAACAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGTCTAATTCTGG
FD939546       --> CCAACAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
EV536241       --> CCAACAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
EW717111       --> CCAACAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
EX746218       --> CCAACAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
EX889280       --> CCAACAATTGTGGAAGGGCAGAAGTCGTGCAAGAGGCATCC-AATTCTGG
EY906399       --> CCA-CAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGTCTAATTCTGG
EY908895       --> CCAACAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
EY924383       --> CCAACAATTGTGGAAGCGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
FD541897       --> CCAACAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
FD970820       --> CCAACAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
FD973627       --> CCAACAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
FD980489       --> CCAACAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
EW716476       --> CCAACAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
FD558123       --> CCAACAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
FD576491       --> CCAACAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
EV568947       --> CCAACAATTGTGGAAGCGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
FD954287       --> CCAACAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
FD946896       --> CCAACAATTGTGGAAGGGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
EY924780       --> CCAACAATTGTGGAAGCGCAGAAGTCATGCAAGAGGCAGCCTAATTCTGG
EV527860       --> ..................................................
FD564566       --> ..................................................

               201    -    251
UN23040        --> GAGCAAAAATTGTATGAAGGATAATGAATGCCGGAAGATTTGCGAAAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531650       <-- GAGCAAAAATTGTATGAAGGATAATGAATGCCGGAAGATTTGCGAAAACG  Raphanus raphanistrum subsp. maritimus
EX767754       <-- GAGCAAAAATTGTATGAAGGATAATGAATGCCGGAAGATTTGCGAAAACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893045       <-- GAGCAAAAATTGTATGAAGGATAATGATTGCCGGAAGATTTGCGAAAACG  Raphanus sativus var. oleiformis
EY902582       <-- GAGCAAAAATTGTATGAAGGATAATGATTGCCGGAAGATTTGCGAAAACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904514       <-- GAGCAAAAATTGTATGAAGGATAATGATTGCCGGAAGATTTGCGAAAACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920042       <-- GAGCAAAAATTGTATGAAGGATAATGAATGCCGGAAGATTTGCGAAACCG  Raphanus raphanistrum subsp. landra
EY920387       <-- GAGCAAAAATTGTATGAAGGATAATGAATGCCGGAAGATTTGCGAAACCG  Raphanus raphanistrum subsp. landra
FD538084       <-- GAGCAAAAATTGTATGAAGGATAATGATTGCCGGAAGATTTGGGAAAACG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967090       <-- GAGCAAAAATTGTATGAAGGATAATGATTGCCGGAAGATTTGCGAAAACG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976367       <-- GAGCAAAAATTGTATGAAAGATAATGAATGCCGGAAGATTTGCGAAACCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW721812       <-- GAGCAAAAATTGTATGAAGGATAATGATTGCCGGAAGATTTGCGAAAACG  Raphanus sativus var. oleiformis
FD554084       <-- GAGCAAAAATTGTATGAAGGATAATGAATGCCGGAAGATTTGCGAAACCG  Raphanus raphanistrum subsp. landra
EV573563       <-- GAGCAAAAATTGTATGAAGGATAATGAATGCCGGAAGATTTGCGAAACCG  Raphanus raphanistrum subsp. landra
FD935640       <-- GAGCAAAAATTGTATGAAGGATAATGAATGCCGGAAGATTTGCGAAACCG  Raphanus sativus var. oleiformis
FD950571       <-- GAGCAAAAATTGTATGAAGGATAATGAATGCCGGAAGATTTGCGAAACCG  Raphanus sativus cv Rat-Tail Radish #3870
FD942928       <-- GAGCAAAAATTGTATGAAGGATAATGAATGCCGGAAAATTTGCGAAACCG  Raphanus sativus cv Early Scarlet Globe
FD580977       <-- GAGCAAAAATTGTATGAAGGATAATGAATGCCGGAAGATTTGCGAAACCG  Raphanus sativus cv Rat-Tail Radish #3870
EV527391       --> GAGCAAAAATTGTATGAAGGATAATGAATGCCGGAAGATTTGCGAAAACG  Raphanus raphanistrum subsp. maritimus
FD939546       --> GAGCAAAAATTGTATGAAGGATAATGAATGCCGGAAGATTTGCGAAACCG  Raphanus sativus var. oleiformis
EV536241       --> GAGCAAAAATTGTATGAAGGATAATGATTGCCGGAAGATTTGTGAAAACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717111       --> GAGTAAAAATTGTATGAAGGTTAATGATTGCCGGAAGATTTGCGAAAACG  Raphanus sativus var. oleiformis
EX746218       --> GAGCAAAAATTGTATGAAGGATAATGAATGCCGGAAGATTTGCGAAAACG  Raphanus raphanistrum subsp. maritimus
EX889280       --> GAGCAAAAATTGTATGAAGGATAATGATTGCCGGAAGATTTGCGAAAACG  Raphanus sativus var. oleiformis
EY906399       --> GAGCAAAAATTGTATGAAGGATAATGATTGCCGGAAGATTTGCGAAAACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908895       --> GAGCAAAAATTGTATGAAGGATAATGATTGCCGGAAGATTTGCGAAAACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924383       --> GAGCAAAAATTGTATGAAGGATAATGAATGCCGGAAGATTTGCGAAACCG  Raphanus raphanistrum subsp. landra
FD541897       --> GAGCAAAAATTGTATGAAGGATAATGATTGCCGGAAGATTTGCGAAAACG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970820       --> GAGCAAAAATTGTATGAAGGATAATGATTGCCGGAAGATTTGCGAAAACG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973627       --> GAGCAAAAATTGTATGAAGGATAATGATTGCCGGAAGATTTGCGAAAACG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980489       --> GAGCAAAAATTGTATGAAAGATAATGAATGCCGGAAGATTTGCGAAACCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716476       --> GAGCAAAAATTGTATGAAGGATAATGATTGCCGGAAGATTTGCGAAAACG  Raphanus sativus var. oleiformis
FD558123       --> GAGCAAAAATTGTATGAAGGATAATGAATGCCGGAAGATTTGCGAAACCG  Raphanus raphanistrum subsp. landra
FD576491       --> GAGCAAAAATTGTATGAAGGATAATGAATGCCGGAAGATTTGCGAAACCG  Raphanus sativus cv Rat-Tail Radish #3870
EV568947       --> GAGCAAAAATTGTATGAAGGATAATGAATGCCGGAAGATTTGCGAAACCG  Raphanus raphanistrum subsp. landra
FD954287       --> GAGCAAAAATTGTATGAAGGATAATGAATGCCGGAAGATTTGCGAAACCG  Raphanus sativus cv Rat-Tail Radish #3870
FD946896       --> GAGCAAAAATTGTATGAAGGATAATGAATGCCGGAAAATTTGCGAAACCG  Raphanus sativus cv Early Scarlet Globe
EY924780       --> GAGCAAAAATTGTATGAAGGATAATGAATGCCGGAAGATTTGCGAAACCG  Raphanus raphanistrum subsp. landra
EV527860       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD564566       --> ..................................................  Raphanus sativus var. oleiformis

               251    -    301
UN23040        --> AGAAAGCATTACGTGCTACTTGCGATTATACATTCCCAAGGCGCCGGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531650       <-- AGAAAGCATTACGTGCTACTTGCGATTATACATTCCCAAGGCGCCGGTGT  Raphanus raphanistrum subsp. maritimus
EX767754       <-- AGAAAGCATTACGTGCTACTTGCGATTATACATTCCCAAGGCGCCGGTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893045       <-- AGAAAGCATTACGTGCTACTTGCGATTATGCATTCCCAAGACGCCGGTGT  Raphanus sativus var. oleiformis
EY902582       <-- AGAAAGCATTACGTGCTACTTGCGATTATGCATTCCCAAGGCGCCGGTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904514       <-- AGAAAGCATTACGTGCTACTTGCGATTATGCATTCCCAAGGCGCCGGTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920042       <-- AGAAAGCATTACGTGCTACTTGCGATTATACATTCCCAAGGCGCCGGTGT  Raphanus raphanistrum subsp. landra
EY920387       <-- AGAAAGCATTACGTGCTACTTGCGATTATACATTCCCAAGGCGCCGGTGT  Raphanus raphanistrum subsp. landra
FD538084       <-- AGAAAGCATTACGTGCTACTTGGGATTATGCATTCCCAAGGCGCCGGTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967090       <-- AGAAAGCATTACGTGCTACTTGCGATTATGCATTCCCAAGGCGCCGGTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976367       <-- AGAAAGCATTACGTGCTACTTGCGATTATACATTCCCAAGGCGCCGGTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW721812       <-- AGAAATCATTACGTGCTACTTGCGATTATGCATTCCCAAGGCGCCGGTGT  Raphanus sativus var. oleiformis
FD554084       <-- AGAAAGCATTACGTGCTACTTGCGATTATACATTCCCAAGGCGCCGGTGT  Raphanus raphanistrum subsp. landra
EV573563       <-- AGAAAGCATTACGTGCTACTTGCGATTATACATTCCCAAGGCGCCGGTGT  Raphanus raphanistrum subsp. landra
FD935640       <-- AGAAAGCATTACGTGCTACTTGCGATTATACATTCCCAAGGCGCCGGTGT  Raphanus sativus var. oleiformis
FD950571       <-- AGAAAGCATTACGTGCTACTTGCGATTATACATTCCCAAGGCGCCGGTGT  Raphanus sativus cv Rat-Tail Radish #3870
FD942928       <-- AGAAAGCATTACGTGCTACTTGCGATTATACATTCCCAAGGCGCCGGTGT  Raphanus sativus cv Early Scarlet Globe
FD580977       <-- AGAAAGCATTACGTGCTACTTGCGATTATACATTCCCAAGGCGCCGGTGT  Raphanus sativus cv Rat-Tail Radish #3870
EV527391       --> AGAAAGCATTACGTGCTACTTGCGATTATACATTCCCAAGGCGCCGGTGT  Raphanus raphanistrum subsp. maritimus
FD939546       --> AGAAAGCATTACGTGCTACTTGCGATTATACATTCCCAAGGCGCCGGTGT  Raphanus sativus var. oleiformis
EV536241       --> AGAAAGCATTACGTGCTACTTGCGATTATGCATTCCCAAGGCGCCGGTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717111       --> AGAAAGCATTACGTGCTACTTGCGATTATGCATTCCCAAGGCGCCGGTGT  Raphanus sativus var. oleiformis
EX746218       --> AGAAAGCATTACGTGCTACTTGCTATTATACATTCCCAAGGCGCCGGTGT  Raphanus raphanistrum subsp. maritimus
EX889280       --> AGAAAGCATTACGTGCTACTTGCGATTATGCATTCCCAAGACGCCGGTGT  Raphanus sativus var. oleiformis
EY906399       --> AGAAAGCATTACGTGCTACTTGCGATTATGCATTCCCAAGGCGCCGGTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908895       --> AGAAAGCATTACGTGCTACTTGCGATTATGCATTCCCAAGGCGCCGGTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924383       --> AGAAAGCATTACGTGCTACTTGCGATTATACATTCCCAAGGCGCCGGTGT  Raphanus raphanistrum subsp. landra
FD541897       --> AGAAAGCATTACGTGCTACTTGCGATTATGCATTCCCAAGGCGCCGGTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970820       --> AGAAAGCATTACGTGCTACTTGCGATTATGCATTCCCAAGGCGCCGGTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973627       --> AGAAAGCATTACGTGCTACTTGCGATTATGCATTCCCAAGGCGCCGGTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980489       --> AGAAAGCATTACGTGCTACTTGCGATTATACATTCCCAAGGCGCCGGTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716476       --> AGAAATCATTACGTGCTACTTGCGATTATGCATTCCCAAGGCGCCGGTGT  Raphanus sativus var. oleiformis
FD558123       --> AGAAAGCATTACGTGCTACTTGCGATTATACATTCCCAAGGCGCCGGTGT  Raphanus raphanistrum subsp. landra
FD576491       --> AGAAAGCATTACGTGCTACTTGCGATTATACATTCCCAAGGCGCCGGTGT  Raphanus sativus cv Rat-Tail Radish #3870
EV568947       --> AGAAAGCATTACGTGCTACTTGCGATTATACATTCCCAAGGCGCCGGTGT  Raphanus raphanistrum subsp. landra
FD954287       --> AGAAAGCATTACGTGCTACTTGCGATTATACATTCCCAAGGCGCCGGTGT  Raphanus sativus cv Rat-Tail Radish #3870
FD946896       --> AGAAAGCATTACGTGCTACTTGCGATTATACATTCCCAAGGCGCCGGTGT  Raphanus sativus cv Early Scarlet Globe
EY924780       --> AGAAAGCATTACGTGCTACTTGCGATTATACATTCCCAAGGCGCCGGTGT  Raphanus raphanistrum subsp. landra
EV527860       --> ...............................................TGT  Raphanus raphanistrum subsp. maritimus
FD564566       --> ...............................................TGT  Raphanus sativus var. oleiformis

               301    -    351
UN23040        --> TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531650       <-- TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTCAT  Raphanus raphanistrum subsp. maritimus
EX767754       <-- TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893045       <-- TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTCAT  Raphanus sativus var. oleiformis
EY902582       <-- TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904514       <-- TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920042       <-- TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTTAT  Raphanus raphanistrum subsp. landra
EY920387       <-- TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTTAT  Raphanus raphanistrum subsp. landra
FD538084       <-- TTTTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967090       <-- TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976367       <-- TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGATATTTTTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW721812       <-- TTCTGCCACTTTCCATTTTAATCAACAGAGCCTTTCCAAGACATTTTCAT  Raphanus sativus var. oleiformis
FD554084       <-- TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTTAT  Raphanus raphanistrum subsp. landra
EV573563       <-- TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTTAT  Raphanus raphanistrum subsp. landra
FD935640       <-- TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTTAT  Raphanus sativus var. oleiformis
FD950571       <-- TTCTGCCACTTTCCATGTTAATCAACAGAGCATTTCCAAGACATTTTTAT  Raphanus sativus cv Rat-Tail Radish #3870
FD942928       <-- TTTTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTTAT  Raphanus sativus cv Early Scarlet Globe
FD580977       <-- TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTTAT  Raphanus sativus cv Rat-Tail Radish #3870
EV527391       --> TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTCAT  Raphanus raphanistrum subsp. maritimus
FD939546       --> TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTTAT  Raphanus sativus var. oleiformis
EV536241       --> TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717111       --> TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTCAT  Raphanus sativus var. oleiformis
EX746218       --> TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTCAT  Raphanus raphanistrum subsp. maritimus
EX889280       --> TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTCAT  Raphanus sativus var. oleiformis
EY906399       --> TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908895       --> TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924383       --> TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTTAT  Raphanus raphanistrum subsp. landra
FD541897       --> TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970820       --> TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973627       --> TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980489       --> TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGATATTTTTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716476       --> TTCTGCCACTTTCCATTTTAATCAACAGAGCCTTTCCAAGACATTTTCAT  Raphanus sativus var. oleiformis
FD558123       --> TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTTAT  Raphanus raphanistrum subsp. landra
FD576491       --> TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTTAT  Raphanus sativus cv Rat-Tail Radish #3870
EV568947       --> TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTTAT  Raphanus raphanistrum subsp. landra
FD954287       --> TTCTGCCACTTTCCATGTTAATCAACAGAGCATTTCCAAGACATTTTTAT  Raphanus sativus cv Rat-Tail Radish #3870
FD946896       --> TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTTAT  Raphanus sativus cv Early Scarlet Globe
EY924780       --> TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTTAT  Raphanus raphanistrum subsp. landra
EV527860       --> TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGACATTTTCAT  Raphanus raphanistrum subsp. maritimus
FD564566       --> TTCTGCCACTTTCCATGTTAATCAACAGAGCCTTTCCAAGATATTTTTAT  Raphanus sativus var. oleiformis

               351    -    401
UN23040        --> GCCCTATGCCAAATAAATATTACTAGATAACTTTCGGAGATATCGCGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531650       <-- GCCCTATGCCAAATAAATATTACTAGATAACTTTCGGAGATATTGCGGAA  Raphanus raphanistrum subsp. maritimus
EX767754       <-- GCCCTATGCCAAATAAATATTACTAGATAACTTTCGGAGATATTGCGGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893045       <-- GCCCTATGCCAAATAAATATTACTAGATAACTTTCGGAGATATCGCGGAA  Raphanus sativus var. oleiformis
EY902582       <-- GCCCTATGCCAAATAAATATTACTAGATAACTTTCGGAGATATCGCGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904514       <-- GCCCTATGCCAAATAAATATTACTAGATAACTTTCGGAGATATCGCGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920042       <-- GCCCTATGCCAAATAAATATTAGTAGATAACTTTCGGAGATATCACGGAA  Raphanus raphanistrum subsp. landra
EY920387       <-- GCCCTATGCCAAATAAATATTAGTAGATAACTTTCGGAGATATCACGGAA  Raphanus raphanistrum subsp. landra
FD538084       <-- GCCCTATGCCAAATAAATATTACTAGATAACTTTCGGAGATATCGCGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967090       <-- GCCCTATGCCAAATAAATATTACTAGATAACTTTCGGAGATATCGCGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976367       <-- GCCCTATGCCAAATAAATATTACTAGATAACTTTCGGAGATATCACGGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW721812       <-- GCCCTATGCCAAATAAATATTACTAGATAACTTTCGGAGATATCGCGGAA  Raphanus sativus var. oleiformis
FD554084       <-- GCCCTATGCCAAATAAATATTACTAGATAACTTTCTAAGATATCACGGAA  Raphanus raphanistrum subsp. landra
EV573563       <-- GCCCTATGCCAAATAAATATTAGTAGATAACTTTCGGAGATATCACGGAA  Raphanus raphanistrum subsp. landra
FD935640       <-- GCCCTATGCCAAATAAATATTACTAGATAACTTTCGGAGATATCACGGAA  Raphanus sativus var. oleiformis
FD950571       <-- GCCCTATGCCAAATAAATATTATTAGATAACTTTCGGATATATCGCGGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD942928       <-- GCCCTATGCCAAATAAATATTACTAGATAACTTTCGGAGATATCACGGAA  Raphanus sativus cv Early Scarlet Globe
FD580977       <-- GCCCTATGCCAAATAAATATTATTAGATCACTTTCGGATATATCTCGGAA  Raphanus sativus cv Rat-Tail Radish #3870
EV527391       --> GCCCTATGCCAAATAAATATTACTAGATAACTTTCGGAGATATTGCGGAA  Raphanus raphanistrum subsp. maritimus
FD939546       --> GCCCTATGCCAAATAAATATTACTAGATAACTTTCGGAGATATCACGGAA  Raphanus sativus var. oleiformis
EV536241       --> GCCCTATGCCAAATAAATATTACTAGATAACTTTCGGAGATATCGCGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717111       --> TCCCTATGCCAAATAAATATTACTAGATAACTTTCGGAGATATCGCGGAA  Raphanus sativus var. oleiformis
EX746218       --> GCCCTATGCCAAATAAATATTACTAGATAACTTTCGGAGATATTGCGGAA  Raphanus raphanistrum subsp. maritimus
EX889280       --> GCCCTATGCCAAATAAATATTACTAGATAACTTTCGGAGATATCGCGGAA  Raphanus sativus var. oleiformis
EY906399       --> GCCCTATGCCAAATAAATATTACTAGATAACTTTCGGAGATATCGCGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908895       --> GCCCTATGCCAAATAAATATTACTAGATAACTTTCGGAGATATCGCGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924383       --> GCCCTATGCCAAATAAATATTAGTAGATAACTTTCGGAGATATCACGGAA  Raphanus raphanistrum subsp. landra
FD541897       --> GCCCTATGCCAAATAAATATTACTAGATAACTTTCGGAGATATCGCGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970820       --> GCCCTATGCCAAATAAATATTACTAGATAACTTTCGGAGATATCGCGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973627       --> GCCCTATGCCAAATAAATATTACTAGATAACTTTCGGAGATATCGCGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980489       --> GCCCTATGCCAAATAAATATTACTAGATAACTTTCGGAGATATCACGGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716476       --> GCCCTATGCCAAATAAATATTACTAGATAACTTTCGGAGATATCGCGGAA  Raphanus sativus var. oleiformis
FD558123       --> GCCCTATGCCAAATAAATATTACTAGATAACTTTCTAAGATATCACGGAA  Raphanus raphanistrum subsp. landra
FD576491       --> GCCCTATGCCAAATAAATATTATTAGATCACTTTCGGATATATCTCGGAA  Raphanus sativus cv Rat-Tail Radish #3870
EV568947       --> GCCCTATGCCAAATAAATATTAGTAGATAACTTTCGGAGATATCACGGAA  Raphanus raphanistrum subsp. landra
FD954287       --> GCCCTATGCCAAATAAATATTATTAGATAACTTTCGGATATATCGCGGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD946896       --> GCCCTATGCCAAATAAATATTACTAGATAACTTTCGGAGATATCACGGAA  Raphanus sativus cv Early Scarlet Globe
EY924780       --> GCCCTATGCCAAATAAATATTAGTAGATAACTTTCGGAGATATCACGGAA  Raphanus raphanistrum subsp. landra
EV527860       --> GCCCTATGCCAAATAAATATTACTAGATAACTTTCGGAGATGTTGCGGAA  Raphanus raphanistrum subsp. maritimus
FD564566       --> GCCCTATGCCAAATAAATATTACTAGATAACTTTCGGAGATATCACGGAA  Raphanus sativus var. oleiformis

               401    -    451
UN23040        --> TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531650       <-- TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
EX767754       <-- TAAAGTTCATTTC.....................................
EX893045       <-- TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
EY902582       <-- TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
EY904514       <-- TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
EY920042       <-- TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
EY920387       <-- TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
FD538084       <-- TAAAGTTCATTTCAATATTATTATAATAAGTTTTTTATATAATTGAAATT
FD967090       <-- TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
FD976367       <-- TA................................................
EW721812       <-- TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
FD554084       <-- TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTGTATAATTGAAATT
EV573563       <-- TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
FD935640       <-- TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
FD950571       <-- TA................................................
FD942928       <-- TAAAGTTCATTCCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
FD580977       <-- TAAAGTTCATTTCAATATTATTATAATAAATTTTCTATATAATTGAAATT
EV527391       --> TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
FD939546       --> TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
EV536241       --> TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
EW717111       --> TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
EX746218       --> TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
EX889280       --> TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
EY906399       --> TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
EY908895       --> TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
EY924383       --> TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
FD541897       --> TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
FD970820       --> TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
FD973627       --> TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
FD980489       --> TA................................................
EW716476       --> TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
FD558123       --> TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTGTATAATTGAAATT
FD576491       --> TAAAGTTCATTTCAATATTATTATAATAAATTTTCTATATAATTGAAATT
EV568947       --> TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
FD954287       --> TA................................................
FD946896       --> TAAAGTTCATTCCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
EY924780       --> TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
EV527860       --> TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTATATAATTGAAATT
FD564566       --> TAAAGTTCATTTCAATATTATTATAATAAGTTTTCTATATAATTGAAATT

               451    -    501
UN23040        --> TATAACAATTTCGATAAATTAATTTTTT-GATAAAAATCAATGAATCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531650       <-- TATAACAATTTCGATAAATTAATTTTTT-GAT..................  Raphanus raphanistrum subsp. maritimus
EX767754       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893045       <-- TATAACAATTTCGATAAATTAATTTTTT-GAT..................  Raphanus sativus var. oleiformis
EY902582       <-- TATAACAATTTCGATAAATTAATTTTTTTGATAAAAATCAATGAATCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904514       <-- TATAACAATTTCGATAAATTAATTTTTT-GATAAAAATCAATGAATCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920042       <-- TATAACAATTTCGATAAATTATTGTTTT-GATAAAAAACAATGAATCTTT  Raphanus raphanistrum subsp. landra
EY920387       <-- TATAACAATTTCGATAAATTATTGTTTT-GATAAAAAACAATGAATCTTT  Raphanus raphanistrum subsp. landra
FD538084       <-- TATAACAATTTCGATAAATTAATTTTTT-GATAAAAATCAATGAATTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967090       <-- TACAACAATTTCGATAAATTAATTTTTT-GATAAAAATCAATGAATCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976367       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW721812       <-- TATAACAATTTCGATAAATTAATTTTTT-GATAAAAATCAATGAATCTTT  Raphanus sativus var. oleiformis
FD554084       <-- TATAACAATTTCGATAAATTAATTTTTTtac...................  Raphanus raphanistrum subsp. landra
EV573563       <-- TATAACAATTTCGATAAATTATTGTTTT-GATAAAAAACAATGAATCTTT  Raphanus raphanistrum subsp. landra
FD935640       <-- TATAACAATTTCGATAAATTAATTTTTT-GATAAAAATCAATGAATCTTT  Raphanus sativus var. oleiformis
FD950571       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD942928       <-- TATAACAATTTCGATAAATTAATTTTTT-GATAAAAATCAATGAATCTTT  Raphanus sativus cv Early Scarlet Globe
FD580977       <-- TATAACAATTTCGATAAATTAATTTTTT-TATAAAAATCAATGAATCTTT  Raphanus sativus cv Rat-Tail Radish #3870
EV527391       --> TATAACAATTTCGATAAATTAATTTTTT-GAT..................  Raphanus raphanistrum subsp. maritimus
FD939546       --> TATAACAATTTCGATAAATTAATTTTTT-GATAAAAATCAATGAATCTTT  Raphanus sativus var. oleiformis
EV536241       --> TATAACAATTTCGATAAATTAATTTTTT-GAT..................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717111       --> TATAACAATTTCGATAAATTAATTTTTT-GAT..................  Raphanus sativus var. oleiformis
EX746218       --> TATAACAATTTCGATAAATTAATTTTTT-GATAAAAATCAATGAATCTTT  Raphanus raphanistrum subsp. maritimus
EX889280       --> TATAACAATTTCGATAAATTAATTTTTT-GAT..................  Raphanus sativus var. oleiformis
EY906399       --> TATAACAATTTCGATAAATTAATTTTTTTGATAAAAATCAATGAATCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908895       --> TATAACAATTTCGATAAATTAATTTTTT-GATAAAAATCAATGAATCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924383       --> TATAACAATTTCGATAAATTATTGTTTT-GATAAAAAACAATGAATCTTT  Raphanus raphanistrum subsp. landra
FD541897       --> TATAACAATTTCGATAAATTAATTTTTT-GATAAAAATCAATGAATCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970820       --> TACAACAATTTCGATAAATTAATTTTTT-GATAAAAATCAATGAATCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973627       --> TATAACAATTTCGATAAATTAATTTTTT-GATAAAAATCAATGAATCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980489       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716476       --> TATAACAATTTCGATAAATTAATTTTTT-GATAAAAATCAATGAATCTTT  Raphanus sativus var. oleiformis
FD558123       --> TATAACAATTTCGATAAATTAATTTTTTtac...................  Raphanus raphanistrum subsp. landra
FD576491       --> TATAACAATTTCGATAAATTAATTTTTT-TATAAAAATCAATGAATCTTT  Raphanus sativus cv Rat-Tail Radish #3870
EV568947       --> TATAACAATTTCGATAAATTATTGTTTT-GATAAAAAACAATGAATCTTT  Raphanus raphanistrum subsp. landra
FD954287       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD946896       --> TATAACAATTTCGATAAATTAATTTTTT-GATAAAAATCAATGAATCTTT  Raphanus sativus cv Early Scarlet Globe
EY924780       --> TATAACAATTTCGATAAATTATTGTTTT-GATAAAAAACAATGAATCTTT  Raphanus raphanistrum subsp. landra
EV527860       --> TATAACAATTTCGATAAATTAATTTTTT-GATAAAAATCAATGAATCTTT  Raphanus raphanistrum subsp. maritimus
FD564566       --> TATAACAATTTCGATAAATTAATTTTTgat....................  Raphanus sativus var. oleiformis

               501    -    551
UN23040        --> TTGATAGTTTAATAATGTAAGAATAACATTAAATTTTATTACAATATATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531650       <-- ..................................................
EX767754       <-- ..................................................
EX893045       <-- ..................................................
EY902582       <-- TTGATAGTTTAATAATGTAAGAATAACATTAAATTTTATTACAATATATT
EY904514       <-- TTGATAGTTTAtt.....................................
EY920042       <-- TTGATAGTTTAATAATGTAAGAATAACATTAAATTTTATTAC........
EY920387       <-- TTGATAGTTTAATAATGTAAGAATAACATTAAATTTTATTAC........
FD538084       <-- TTGAT.............................................
FD967090       <-- TTGAc.............................................
FD976367       <-- ..................................................
EW721812       <-- TTGATAGTTTAATAATGTAAGAATAACATTAAATTct.............
FD554084       <-- ..................................................
EV573563       <-- TTGATAGTTTAATAATGTAAGAATAACATTAAATTTTATTACAATATATT
FD935640       <-- TTGATAGTTTAATAATGTAAGAATAACATTAAATTTTATTACAATATATT
FD950571       <-- ..................................................
FD942928       <-- TTGATAGTTTAATAATGTAAGAATAACATTAAATTTTATTACAATATATT
FD580977       <-- TTGATAGTTTAATAATGTAAGAATAACATTAAATTTTATTACAATATATT
EV527391       --> ..................................................
FD939546       --> TTGATAGTTTAATAATGTAAGAATAACATTAAATTTTATTACAATATATT
EV536241       --> ..................................................
EW717111       --> ..................................................
EX746218       --> TTGATAGTTTAATAATGTAAGAATAACATTAAATTTTATTAC........
EX889280       --> ..................................................
EY906399       --> TTGATAGTTTAATAATGTAAGAATAACATTAAATTTTATTACAATATATT
EY908895       --> TTGATAGTTTAtt.....................................
EY924383       --> TTGATAGTTTAATAATGTAAGAATAACATTAAATTTTATTAC........
FD541897       --> TTGAT.............................................
FD970820       --> TTGAc.............................................
FD973627       --> TTGATAGTTTAATAATGTAAGAATAACATTAAATTTTATTACAATATATT
FD980489       --> ..................................................
EW716476       --> TTGATAGTTTAATAATGTAAGAATAACATTAAATTct.............
FD558123       --> ..................................................
FD576491       --> TTGATAGTTTAATAATGTAAGAATAACATTAAATTTTATTACAATATATT
EV568947       --> TTGATAGTTTAATAATGTAAGAATAACATTAAATTTTATTACAATATATT
FD954287       --> ..................................................
FD946896       --> TTGATAGTTTAATAATGTAAGAATAACATTAAATTTTATTACAATATATT
EY924780       --> TTGATAGTTTAATAATGTAAGAATAACATTAAATTTTATTAC........
EV527860       --> TTGATAGTTTAATAATGTAAGAATAACATTAAATTTTATTACAATATATT
FD564566       --> ..................................................

               551    -    601
UN23040        --> AACCATTTTAACAC
                   ~~~~~~~~~~~~~~
EV531650       <-- ..............
EX767754       <-- ..............
EX893045       <-- ..............
EY902582       <-- AACC..........
EY904514       <-- ..............
EY920042       <-- ..............
EY920387       <-- ..............
FD538084       <-- ..............
FD967090       <-- ..............
FD976367       <-- ..............
EW721812       <-- ..............
FD554084       <-- ..............
EV573563       <-- AACCATTTTAAC..
FD935640       <-- AACCATTTTAACAC
FD950571       <-- ..............
FD942928       <-- AACCATTTT.....
FD580977       <-- AACCATTTTcac..
EV527391       --> ..............
FD939546       --> AACCATTTTAACAC
EV536241       --> ..............
EW717111       --> ..............
EX746218       --> ..............
EX889280       --> ..............
EY906399       --> AACC..........
EY908895       --> ..............
EY924383       --> ..............
FD541897       --> ..............
FD970820       --> ..............
FD973627       --> AACCATTTTAAC..
FD980489       --> ..............
EW716476       --> ..............
FD558123       --> ..............
FD576491       --> AACCATTTTcac..
EV568947       --> AACCATTTTAAC..
FD954287       --> ..............
FD946896       --> AACCATTTT.....
EY924780       --> ..............
EV527860       --> AA............
FD564566       --> ..............