1      -     51
UN23045        --> CGTGCAGTAAGAAATCATCAATTCGTTTATAGTAAATAGTGGTAGTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914160       <-- ........AAGAAATCATCAATTCGTTTATAGTAAATAGTGGTAGTTTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964359       <-- ........AAGAAATCATCAATTCGTTTATAGTAAATAGTGGTAGTTTTT  Raphanus raphanistrum subsp. maritimus
EX894408       <-- ...............CATCAATTCGTTTATAGTAAATAGTGGTGGTTTT-  Raphanus sativus cv Early Scarlet Globe
EV537258       <-- ...................................ATAGTGGTGGTTTT-  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552531       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX904552       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX769887       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW714169       <-- ..................................................  Raphanus sativus var. oleiformis
EV526573       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD540978       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538213       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979685       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569993       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV535842       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567491       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX888973       <-- ..................................................  Raphanus sativus var. oleiformis
FD989031       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV535558       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899945       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY930809       <-- ..................................................  Raphanus sativus var. oleiformis
FD562201       <-- ..................................................  Raphanus sativus var. oleiformis
EW726723       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD949400       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX904120       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY916326       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556277       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW732949       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY895609       --> CGTGCAGTAAGAAATCATCAATTCGTTTATAGTAAATAGTGGTAGTTTTT  Raphanus raphanistrum subsp. maritimus
EY912022       --> CGTGCAGTAAGAAATCATCAATTCGTTTATAGTAAATAGTGGTGGTTTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774111       --> ........AAGAAATCATCAATTCGTTTATAGTAAATAGTGGTAGTTTTT  Raphanus raphanistrum subsp. landra
FD960390       --> ........AAGAAATCATCAATTCGTTTATAGTAAATAGTGGTAGTTTTT  Raphanus raphanistrum subsp. maritimus
EV574399       --> .........AGAAATCATCAATTCGTTTATAGTAAATAGTGGTAGTTTTT  Raphanus raphanistrum subsp. landra
EV542279       --> ........aaaAAATCATCAATTCGTTTATAGTAAATGGTGGTGGTTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945053       --> ............AATCATCAATTCGTTTATAGTAAATAGTGGTGGTTTTT  Raphanus sativus cv Early Scarlet Globe
EV540419       --> .............ATCATCAATTCGTTTATAGTAAATAGTGGTGGTTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547431       --> ...............CATCAATTCGTTTATAGTAAATAGTGGTAGTTTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572422       --> ...............CATCAATTCGTTTATAGTAAATAGTGGTAGTTTTT  Raphanus raphanistrum subsp. landra
EX898735       --> ...............CATCAATTCGTTTATAGTAAATAGTGGGGGTTTTT  Raphanus sativus cv Early Scarlet Globe
EX908067       --> ...............cgTCAATTCGTTTATAGTAAATAGTGGTAGTTTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD537370       --> ...............cgTCAATTCGTTTATAGTAAATAGTGGTGGTTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566162       --> ................cTCAATTCGTTTATAGTAAATAGTGGTAGTTTTT  Raphanus sativus var. oleiformis
EV531020       --> ..............................AGTAAATAGTGGTAGTTTTT  Raphanus raphanistrum subsp. maritimus
EW729346       --> ..............................................TTTT  Raphanus sativus cv Early Scarlet Globe
EV540207       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552614       --> ..................................................  Raphanus raphanistrum subsp. landra
EV541531       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984866       --> ..................................................  Raphanus raphanistrum subsp. landra

               51     -    101
UN23045        --> GATACATAAATTCAAAAGGGAAAGAACAGTGTAAGA--CTCTCAAGGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914160       <-- GATACATAAATTCAAAAGGGAAAGAACAGTGTAAGA--CTCTCAAGGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964359       <-- GATACATAAATTCAAAAGGGAAAGAACAGTGTAAGA--CTCTCAAGGTTT  Raphanus raphanistrum subsp. maritimus
EX894408       <-- GATACATAAAT-CAAATGGGAAATAACAGTAAGAGA--CTCTCAAGGTTT  Raphanus sativus cv Early Scarlet Globe
EV537258       <-- GATACATAAATTCATAAGGGAAATAACAGTGTAAGA--CTCTCAAGGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552531       <-- GATACATAAATTCAAAATGGAAAGAACAGTGTAAGA--CTCTCAAGGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX904552       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX769887       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW714169       <-- ..................................................  Raphanus sativus var. oleiformis
EV526573       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD540978       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538213       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979685       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569993       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV535842       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567491       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX888973       <-- ..................................................  Raphanus sativus var. oleiformis
FD989031       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV535558       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899945       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY930809       <-- ..................................................  Raphanus sativus var. oleiformis
FD562201       <-- ..................................................  Raphanus sativus var. oleiformis
EW726723       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD949400       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX904120       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY916326       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556277       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW732949       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY895609       --> GATACATAAATTCAAAAGGGAAAGAACAGTGTAAGA--CTCTCAAGGTTT  Raphanus raphanistrum subsp. maritimus
EY912022       --> GATGCATAAAATCAAATGGGAAATAACAGTAAGAGA--CTCTCAAGGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774111       --> GATACATAAATTCAAAAGGGAAAGAACAGTGTAAGA--CTCTCAAGGTTT  Raphanus raphanistrum subsp. landra
FD960390       --> GATACATAAATTCAAAAGGGAAAGAACAGTGTAAGA--CTCTCAAGGTTT  Raphanus raphanistrum subsp. maritimus
EV574399       --> GATACATAAATTCGAAAGGGAAAGAACAGTGTAAGA--CTCTCAAGGTTT  Raphanus raphanistrum subsp. landra
EV542279       --> GATACATAAAATCAAATGGGAAATAACAGTAAGAGA--CTCTCAAGGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945053       --> GATACATAAAATCAAATGGGAAATAACAGTAAGAGA--CTCTCAAGGTTT  Raphanus sativus cv Early Scarlet Globe
EV540419       --> GATACATAAATTCAAAAGGGAAATAACAGTGTAAGAGACTCTCAAGGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547431       --> GATACATAAATTCAAAATGGAAAGAACAGTGTAAGA--CTCTCAAGGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572422       --> GATACATAAATTCAAAAGGGAAAGAACAGTGTAAGA--CTCTCAAGGTTT  Raphanus raphanistrum subsp. landra
EX898735       --> GATACATAAAATCAAATGGGAAATAACAGTAAGAGA--CTCTCAAGGTTT  Raphanus sativus cv Early Scarlet Globe
EX908067       --> GATACATAAATTCAAAATGGAAAGAACAGTGTAAGA--CTCTCAAGGTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD537370       --> GATACATAAATTCAAAAGGGAAATAACAGTGTAAGAGACTCTCAAGGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566162       --> GATACATAAATTCAAAATGGAAAGAACGGTGTAAGA--CTCTCAAGGTTT  Raphanus sativus var. oleiformis
EV531020       --> GATACATAAATTCAAAAGGGAAAGAACAGTGTAAGA--CCCTCAAGGTTT  Raphanus raphanistrum subsp. maritimus
EW729346       --> GATACATAAAATCAAATGGGAAATAACAGTAAGAGA--CTCTCAAGGTTT  Raphanus sativus cv Early Scarlet Globe
EV540207       --> GATACATAAAATCAAATGGGAAATAACAGTAAGAGA--CTCTCAAGGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552614       --> ......TAAATTCAAAAGGGAAAGAACAGTGTAAGA--CTCTCAAGGTTT  Raphanus raphanistrum subsp. landra
EV541531       --> ...............AAGGGAAATAACAGTGTAAGA--CTCTCAAGGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984866       --> ..................................................  Raphanus raphanistrum subsp. landra

               101    -    151
UN23045        --> GACAGCGATTACAGAAGAGAATTTAATAAGACTT--GGAGATCAACCGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914160       <-- GACAGCGATTACAGAAGAGAATTTAATAAGACTT--GGAGATCAACCGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964359       <-- GACAGCGATTACAGAAGAGAATTTAATAAGACTT--GGAGATCAACCGAT  Raphanus raphanistrum subsp. maritimus
EX894408       <-- GACAGCGATTACAGAAGAGAATT-AATAAGACTTTTGGAGATCAACCGAT  Raphanus sativus cv Early Scarlet Globe
EV537258       <-- GACAGCGATTACAGAAGAGAATT-AATAAGACTT--GGAGATCAACCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552531       <-- GACAGCGATTACAGAAGAGAATTTAATAAGACTT--GGAGATCAACCGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX904552       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX769887       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW714169       <-- ..................................................  Raphanus sativus var. oleiformis
EV526573       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD540978       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538213       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979685       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569993       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV535842       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567491       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX888973       <-- ..................................................  Raphanus sativus var. oleiformis
FD989031       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV535558       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899945       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY930809       <-- ..................................................  Raphanus sativus var. oleiformis
FD562201       <-- ..................................................  Raphanus sativus var. oleiformis
EW726723       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD949400       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX904120       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY916326       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556277       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW732949       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY895609       --> GACAGCGATTACAGAAGAGAATTTAATAAGACTT--GGAGATCAACCGAT  Raphanus raphanistrum subsp. maritimus
EY912022       --> GACAGCGATTACAGAAGAGAATT-AATAAGACTTTTGGAGATCAACCGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774111       --> GACAGCGATTACAGAAGAGAATTTAATAAGACTT--GGAGATCAACCGAT  Raphanus raphanistrum subsp. landra
FD960390       --> GACAGCGATTACAGAAGAGAATTTAATAAGACTT--GGAGATCAACCGAT  Raphanus raphanistrum subsp. maritimus
EV574399       --> GACAGCGATTACAGAAGAGAATTTAATAAGACTT--GGAGATCAACCGAT  Raphanus raphanistrum subsp. landra
EV542279       --> GACAGCGATTACAGAAGAGAATT-AATAAGACTTTTGGAGATCAACCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945053       --> GACAGCGATTACAGAAGAGAATT-AATAAGACTTTTGGAGATCAACCGAT  Raphanus sativus cv Early Scarlet Globe
EV540419       --> GACAGCGATTACAGAAGAGAATT-AATAAGACTT--GGAGATCAACCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547431       --> GACAGCGATTACAGAAGAGAATTTAATAAGACTT--GGAGATCAACCGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572422       --> GACAGCGATTACAGAAGAGAATTTAATAAGACTT--GGAGATCAACCGAT  Raphanus raphanistrum subsp. landra
EX898735       --> GACAGCGATTACAGAAGAGAATT-AATAAGACTTTTGGAGATCAACCGAT  Raphanus sativus cv Early Scarlet Globe
EX908067       --> GACAGCGATTACAGAAGAGAATTTAATAAGACTT--GGAGATCAACCGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD537370       --> GACAGCGATTACAGAAGAGAATT-AATAAGACTT--GGAGACCAACCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566162       --> GACAGCGATTACAGAAGAGAATTTAATAAGACTT--GGAGATCAACCGAT  Raphanus sativus var. oleiformis
EV531020       --> GACAGCGATTACAGAAGAGAATTTAATAAGACTT--GGAGATCAACCGAT  Raphanus raphanistrum subsp. maritimus
EW729346       --> GACAGCGATTACAGAAGAGAATT-AATAAGACTTTTGGAGATCAACCGAT  Raphanus sativus cv Early Scarlet Globe
EV540207       --> GACAGCGATTACAGAAGAGAATT-AATAAGACTTTTGGAGATCAACCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552614       --> GACAGCGATTACAGAAGAGAATTTAATAAGACTT--GGAGATCAACCGAT  Raphanus raphanistrum subsp. landra
EV541531       --> GACAGCGATTACAGAAGAGAATT-AATAAGACTT--GGAGATCAACCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984866       --> ..................................................  Raphanus raphanistrum subsp. landra

               151    -    201
UN23045        --> GAGAGTGAAGCCCTGTCCAATCAAAGAAGTGGCGAGAATCTCATTGGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914160       <-- GAGAGTGAAGCCCTGTCCAATCAAAGAAGTGGCGAGAATCTCATTGGCAG
FD964359       <-- GAGAGTGAAGCCCTGTCCAATCAAAGAAGTGGCGAGAATCTCATTGGCAG
EX894408       <-- GAGAGTGAAGCCCTGTCCAATCAAAGAAGCGGCGAGAATCTCATTGGCAG
EV537258       <-- GAGAGTGAAGCCCTGTCCAATCAAAGAAGTGGCGAGAATCTCATTGGCAG
EV552531       <-- GAGAGTGAAGCCCTGTCCAATCAAAGAAGTGGCGAGAATCTCATTGGCAG
EX904552       <-- ..................................................
EX769887       <-- ..................................................
EW714169       <-- ..................................................
EV526573       <-- ..................................................
FD540978       <-- ..................................................
EV538213       <-- ..................................................
FD979685       <-- ..................................................
EV569993       <-- ..................................................
EV535842       <-- ..................................................
EV567491       <-- ..................................................
EX888973       <-- ..................................................
FD989031       <-- ..................................................
EV535558       <-- ..................................................
EY899945       <-- ..................................................
EY930809       <-- ..................................................
FD562201       <-- ..................................................
EW726723       <-- ..................................................
FD949400       <-- ..................................................
EX904120       <-- ..................................................
EY916326       <-- ..................................................
FD556277       <-- ..................................................
EW732949       <-- ..................................................
EY895609       --> GAGAGTGAAGCCCTGTCCAATCAAAGAAGTGGCGAGAATCTCATTGGCAG
EY912022       --> GAGAGTGAAGCCCTGTCCAATCAAAGAAGTGGCGAGAATCTCATTGGCAG
EX774111       --> GAGAGTGAAGCCCTGTCCAATCAAAGAAGTGGCGAGAATCTCATTGGCAG
FD960390       --> GAGAGTGAAGCCCTGTCCAATCAAAGAAGTGGCGAGAATCTCATTGGCAG
EV574399       --> GAGAGTGAAGCCCTGTCCAATCAAAGAAGTGGCGAGAATCACATTGGCGG
EV542279       --> GAGAGTGAAGCCCTGTCCAATCAAAGAAGTGGCGAGAATCTCATTGGCAG
FD945053       --> GAGAGTGAAGCCCTGTCCAATCAAAGAAGTGGCGAGAATCTCATTGGCAG
EV540419       --> GAGAGTGAAGCCCTGTCCAATCAAAGAAGTGGCGAGAATCTCATTGGCAG
EV547431       --> GAGAGTGAAGCCCTGTCCAATCAAAGAAGTGGCGAGAATCTCATTGGCAG
EV572422       --> GAGAGTGAAGCCCTGTCCAATCAAAGAAGTGGCGAGAATCTCATTGGCAG
EX898735       --> GAGAGTGAAGCCCTGTCCAATCAAAGAAGCGGCGAGAATCTCATTGGCAG
EX908067       --> GAGAGTGAAGCCCTGTCCAATCAAAGAAGTGGCGAGAATCTCATTGGCAG
FD537370       --> GAGAGTGAAGCCCTGTCCAATCAAAGAAGTGGCGAGAATCTCATTGGCAG
FD566162       --> GAGAGTGAAGCCCTGTCCAATCAAAGAGGTGGCGAGAATCTCATTGGCAG
EV531020       --> GAGAGTGAAGCCCTGTCCAATCAAAGAAGTGGCGAGAATCTCATTGGCAA
EW729346       --> GAGAGTGAAGCCCTGTCCAATCAAAGAAGTGGCGAGAATCTCATTGGCAG
EV540207       --> GAGAGTGAAGCCCTGTCCAATCAAAGAAGTGGCGAGAATCTCATTGGCAG
FD552614       --> GAGAGTGAAGCCCTGTCCAATCAAAGAAGTGGCGAGAATCTCATTGGCAG
EV541531       --> GAGAGTGAAGCCCTGTCCAATCAAAGAAGTGGCGAGAATCTCATTGGCAG
FD984866       --> ..................................................

               201    -    251
UN23045        --> CTTCGGAGGGATGAACACTGTCCC-AGAACACATACTGAGTAGCATTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914160       <-- CTTCGGAGGGATGAACACTGTCCC-AGAACACATACTGAGTAGCATTGGA
FD964359       <-- CTTCGGAGGGATGAACACTGTCCC-AGAACACATACTGAGTAGCATTGGA
EX894408       <-- CTTCGGAGGGATGAACACTGTCCC-AGAACACATACTGAGTAGCATTGGA
EV537258       <-- CTTCGGAAGGATGAACACTATCCCCAGAACACATACTGAGTAGCATTGGA
EV552531       <-- CTTCAGAAGGATGAACACTGTCCC-AGAACACATACTGAGTAGCATTGGA
EX904552       <-- ..................................................
EX769887       <-- ..................................................
EW714169       <-- ..................................................
EV526573       <-- ..................................................
FD540978       <-- ..................................................
EV538213       <-- ..................................................
FD979685       <-- ..................................................
EV569993       <-- ..................................................
EV535842       <-- ..................................................
EV567491       <-- ..................................................
EX888973       <-- ..................................................
FD989031       <-- ..................................................
EV535558       <-- ..................................................
EY899945       <-- ..................................................
EY930809       <-- ..................................................
FD562201       <-- ..................................................
EW726723       <-- ..................................................
FD949400       <-- ..................................................
EX904120       <-- ..................................................
EY916326       <-- ..................................................
FD556277       <-- ..................................................
EW732949       <-- ..................................................
EY895609       --> CTTCGGAAGGATGAACACTGTCCC-AGAACACATACTGAGTAGCATTGGA
EY912022       --> CTTCGGAGGGATGAACACTGTCCC-AGAACACATACTGAGTAGCATTGGA
EX774111       --> CTTCGGAGGGATGAACACTGTCCC-AGAACACATACTGAGCAGCATTGGA
FD960390       --> CTTCGGAGGGATGAACACTGTCCC-AAAACACATACTGAGTAGCATTGGA
EV574399       --> CTTCGGAGGGATGAACACTGGCCC-AAAACACATACTGAGTAGCATTGGA
EV542279       --> CTTCGGAGGGATGAACACTGTCCC-AGAACACATACTGAGTAGCATTGGA
FD945053       --> CTTCGGAGGGATGAACACTGTCCC-AGAACACATACTGAGTAGCATTGGA
EV540419       --> CTTCGGAAGGATGAACACTATCCC-AGAACACATACTGAGTAGCATTGGA
EV547431       --> CTTCAGAAGGATGAACACTGTCCC-AAAACACATACTGAGTAGCATTGGA
EV572422       --> CTTCGGAGGGATGAACACTGTCCC-AGAACACATACTGAGTAGCATTGGA
EX898735       --> CTTCGGAGGGATGAACACTGTCCC-AGAACACATACTGAGTAGCATTGGA
EX908067       --> CTTCAGAAGGATGAACACTGTCCC-AGAACACATACTGAGTAGCATTGGA
FD537370       --> CTTCGGAAGGATGAACACTATCCC-AGAACACATACTGAGTAGCATTGGA
FD566162       --> CTTCAGAAGGATGAACACTGTCCC-AGAACACATACTGAGTAGCATTGGA
EV531020       --> CTTCGGAGGGATGAACACTGTCCC-AGAACACATACTGAGTAGCATTGGA
EW729346       --> CTTCGGAGGGATGAACACTGTCCC-AGAACACATACTGAGTAGCATTGGA
EV540207       --> CTTCGGAGGGATGAACACTGTCCC-AGAACACATACTGAGTAGCATTGGA
FD552614       --> CTTCGGAGGGATGAACACTGTCCC-AGAACACATACTGAGTAGCATTGGA
EV541531       --> CTTCGGAAGGATGAACACTATCCC-AGAACACATACTGAGTAGCATTGGA
FD984866       --> ..................................................

               251    -    301
UN23045        --> GCATGTCCCGTACGATTTCGGATTGCACAAGAGCGAAGTTGTCTCGACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914160       <-- GCATGTCCCGTACGATTTCGGATTGCACAAGAGCGAAGTTGTCTCGACCG
FD964359       <-- GCATGTCCCGTACGATTTCGGATTGCACAAGAGCGAAGTTGTCTCGACCG
EX894408       <-- GCATGTCCCGTACGATTTCGGATTGCACAAGAGCGAAGTTGTCTCGACCG
EV537258       <-- GCATGTCCCGTACGATTTCGGATTGCACAAGAGCGAAGTTGTCTCGACCG
EV552531       <-- GCATGTCCCATACGATTTCGGATTGCACAAGAGCGAAGTTGTCTCGACCG
EX904552       <-- ..................................................
EX769887       <-- ..................................................
EW714169       <-- ..................................................
EV526573       <-- ..................................................
FD540978       <-- ..................................................
EV538213       <-- ..................................................
FD979685       <-- ..................................................
EV569993       <-- ..................................................
EV535842       <-- ..................................................
EV567491       <-- ..................................................
EX888973       <-- ..................................................
FD989031       <-- ..................................................
EV535558       <-- ..................................................
EY899945       <-- ..................................................
EY930809       <-- ..................................................
FD562201       <-- ..................................................
EW726723       <-- ..................................................
FD949400       <-- ..................................................
EX904120       <-- ..................................................
EY916326       <-- ..................................................
FD556277       <-- ..................................................
EW732949       <-- ..................................................
EY895609       --> GCATGTCCCGTACGATTTCGGATTGCACAAGAGCGAAGTTGTCTCGACCG
EY912022       --> GCATGTCCCGTACGATTTCGGATTGCACAAGAGCGAAGTTGTCTCGACCG
EX774111       --> GCATGTCCCGTACGATTTCGGATTGCACAAGAGCGAAGTTGTCTCGACCG
FD960390       --> GCATGTCCCGTACGATTTCGGATTGCACAAGAGCGAAGTTGTCTCGACCG
EV574399       --> GCATGTCCCGTACGATTTCGGATTGCACAA-AGCGAAGTTGTCTCGACCG
EV542279       --> GCATGTCCCGTACGATTTCGGATTGCACAAGAGCGAAGTTGTCTCGACCG
FD945053       --> GCATGTCCCGTACGATTTCGGATTGCACAAGAGCGAAGTTGTCTCGACCG
EV540419       --> GCATGTCCCGTACGATTTCGGATTGCACAAGAGCGAAGTTGTCTCGACCG
EV547431       --> GCATGTCCCATACGATTTCGGATTGCACAAGAGCGAAGTTGTCTCGACCG
EV572422       --> GCATGTCCCGTACGATTTCGGATTGCACAAGAGCGAAGTTGTCTCGACCG
EX898735       --> GCATGTCCCGTACGATTTCGGATTGCACAAGAGCGAAGTTGTCTCGACCG
EX908067       --> GTATGTCCCATACGATTTCGGATTGCACAAGAGCGAAGTTGTCTCGACCG
FD537370       --> GCATGTCCCGTACGATTTCGGATTGCACAAGAGCGAAGTTGTCTCGACCG
FD566162       --> GCATGTCCCATACGATTTCGGATTGCACAAGAGCGAAGTTGTCTCGACCG
EV531020       --> GCATGTCCCGTACGATTTCGGATTGCGCAAGAGCGAAGTTGTCTCGACCG
EW729346       --> GCATGTCCCGTACGATTTCGGATTGCACAAGAGCGAAGTTGTCTCGACCG
EV540207       --> GCATGTCCCGTACGATTTCGGATTGCACAAGAGCGAAGTTGTCTCGACCG
FD552614       --> GCATGTCCCGTACGATTTCGGATTGCACAAGAGCGAAGTTGTCTCGACCG
EV541531       --> GCATGTCCCGTACGATTTCGGATTGCACAAGAGCGAAGTTGTCTCGACCG
FD984866       --> ..................................................

               301    -    351
UN23045        --> TTCCTGTTCCACAACATCCTTTTGTTGCTTCCGTGAATCCAGATTTAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914160       <-- TTCCTGTTCCACAACATCCTTTTGTTGCTTCCGTGAATCCAGATTTAGCA
FD964359       <-- TTCCTGTTCCACAACATCCTTTTGTTGCTTCCGTGAATCCAGATTTAGCA
EX894408       <-- TTCCTGTTCCACAACATCCTTTTGTTGCTTCCGTGAATCCAGATTTAGCA
EV537258       <-- TTCCTGTTCCACAACATCCTTTTGTTGCTTCCGTGAATCCAGATTTAGCA
EV552531       <-- TTCCTGTTCCACAACATCCTTTTGTTGCTTCCGTGAATCCAGATTTAGCA
EX904552       <-- ................................GTGAATCCAGATTTAGCA
EX769887       <-- ..................................................
EW714169       <-- ..................................................
EV526573       <-- ..................................................
FD540978       <-- ..................................................
EV538213       <-- ..................................................
FD979685       <-- ..................................................
EV569993       <-- ..................................................
EV535842       <-- ..................................................
EV567491       <-- ..................................................
EX888973       <-- ..................................................
FD989031       <-- ..................................................
EV535558       <-- ..................................................
EY899945       <-- ..................................................
EY930809       <-- ..................................................
FD562201       <-- ..................................................
EW726723       <-- ..................................................
FD949400       <-- ..................................................
EX904120       <-- ..................................................
EY916326       <-- ..................................................
FD556277       <-- ..................................................
EW732949       <-- ..................................................
EY895609       --> TTCCTGTTCCACAACATCCTTTTGTTGCTTCCGTGAATCCAGATTTAGCA
EY912022       --> TTCCTGTTCCACAACATCCTTTTGTTGCTTCCGTGAATCCAGATTTAGCA
EX774111       --> TTCCTGTTCCACAACATCCTTTTGTTGCTTCCGTGAATCCAGATTTAGCA
FD960390       --> TTCCTGTTCCACAACATCCTTTTGTTGCTTCCGTGAATCCAGATTTAGCA
EV574399       --> TTCCTGTTCCACAAC...................................
EV542279       --> TTCCTGTTCCACAACATCCTTTTGTTGCTTCCGTGAATCCAGATTTAGCA
FD945053       --> TTCCTGTTCCACAACATCCTTTTGTTGCTTCCGTGAATCCAGATTTAGCA
EV540419       --> TTCCTGTTCCACAACATCCTTTTGTTGCTTCCGTGAATCCAGATTTAGCA
EV547431       --> TTCCTGTTCCACAACATCCTTTTGTTGCTTCCGTGAATCCAGATTTAGCA
EV572422       --> TTCCTGTTCCACAACATCCTTTTGTTGCTTCCGTGAATCCAGATTTAGCA
EX898735       --> TTCCTGTTCCACAACATCCTTTTGTTGCTTCCGTGAATCCAGATTTAGCA
EX908067       --> TTCCTGTTCCACAACATCCTTTTGTTGCTTCCGTGAATCCAGATTTAGCA
FD537370       --> TTCCTGTTCCACAACATCCTTTTGTTGCTTCCGTGAATCCAGATTTAGCA
FD566162       --> TTCCTGTTCCACAACATCCTTTTGTTGCTTCCGTGAATCCAGATTTAGCA
EV531020       --> TTCCTGTTCCACAACATCCTTTTGTTGCTTCCGTGAATCCAGATTTAGCA
EW729346       --> TTCCTGTTCCACAACATCCTTTTGTTGCTTCCGTGAATCCAGATTTAGCA
EV540207       --> TTCCTGTTCCACAACATCCTTTTGTTGCTTCCGTGAATCCAGATTTAGCA
FD552614       --> TTCCTGTTCCACAACATCCTTTTGTTGCTTCCGTGAATCCAGATTTAGCA
EV541531       --> TTCCTGTTCCACAACATCCTTTTGTTGCTTCCGTGAATCCAGATTTAGCA
FD984866       --> ..................................................

               351    -    401
UN23045        --> GGGGACTGAACAAGATCATAGAGTGGGGTGAAGATGTCAAAGACAACAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914160       <-- GGGGACTGAACAAGATCATAGAGTGGGGTGAAGATGTCAAAGACAACAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964359       <-- GGGGACTGAACAAGATCATAGAGTGGGGTGAAGATGTCAAAGACAACAAT  Raphanus raphanistrum subsp. maritimus
EX894408       <-- GGGGACTGAACAAGATCATAGAGTGGGGTGAAGATGTCAAAAACAACAAT  Raphanus sativus cv Early Scarlet Globe
EV537258       <-- GGGGACTGAACAAGATCATAGAGTGGGGTGAAGATGTCAAAGACAACAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552531       <-- GGGGACTGAACAAGATCATAGAGTGGGGTGAAGATGTCAAAGACAACAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX904552       <-- GGGGACTGAACAAGATCATAGAGTGGGGTGAAGATGTCAAAGACAACAAT  Raphanus sativus cv Rat-Tail Radish #3870
EX769887       <-- ...........................................CAACAAT  Raphanus raphanistrum subsp. landra
EW714169       <-- ..................................................  Raphanus sativus var. oleiformis
EV526573       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD540978       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538213       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979685       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569993       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV535842       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567491       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX888973       <-- ..................................................  Raphanus sativus var. oleiformis
FD989031       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV535558       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899945       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY930809       <-- ..................................................  Raphanus sativus var. oleiformis
FD562201       <-- ..................................................  Raphanus sativus var. oleiformis
EW726723       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD949400       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX904120       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY916326       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556277       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW732949       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY895609       --> GGGGACTGAACAAGATCATAGAGTGGGGTGAAGATGTCAAAGACAACAAT  Raphanus raphanistrum subsp. maritimus
EY912022       --> GGGGACTGAACAAGATCATAGAGTGGGGTGAAGATGTCAAAAACAACAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774111       --> GGGGACTGAACAAGATCATAGAGTGGGGTGAAGATGTCAAAGACAACAAT  Raphanus raphanistrum subsp. landra
FD960390       --> GGGGACTGAACAAGATCATAGAGTGGGGTGAAGATGTCAAAGACAACAAT  Raphanus raphanistrum subsp. maritimus
EV574399       --> ..................................................  Raphanus raphanistrum subsp. landra
EV542279       --> GGGGACTGAACAAGATCATAGAGTGGGGTGAAGATGTCAAAAACAACAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945053       --> GGGGACTGAACAAGATCATAGAGTGGGGTGAAGATGTCAAAAACAACAAT  Raphanus sativus cv Early Scarlet Globe
EV540419       --> GGGGACTGAACAAGATCATAAAGTGGGGTGAAGATGTCAAAGACAACAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547431       --> GGGGACTGAACAAGATCATAGAGTGGGGTGAAGATGTCAAAGACAACAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572422       --> GGGGACTGAACAAGATCATAGAGTGGGGTGAAGATGTCAAAGATAACAAT  Raphanus raphanistrum subsp. landra
EX898735       --> GGGGACTGAACAAGATCATAGAGTGGGGTGAAGATGTCAAAAACAACAAT  Raphanus sativus cv Early Scarlet Globe
EX908067       --> GGGGACTGAACAAGATCATAGAGTGGGGTGAAGATGTCAAAGACAACAAT  Raphanus sativus cv Rat-Tail Radish #3870
FD537370       --> GGGGACTGAACAAGATCATAGAGTGGGGTGAAGATGTCAAAGACAACAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566162       --> GGGGACTGAACAAGATCATAGAGTGGGGTGAAGATGTCAAAGACAACAAT  Raphanus sativus var. oleiformis
EV531020       --> GGGGACTGAACAAGATCATAGAGTGGGGTGAAGATGTCAAAGACAACAAT  Raphanus raphanistrum subsp. maritimus
EW729346       --> GGGGACTGAACAAGATCATAGAGTGGGGTGAAGATGTCAAAAACAACAAT  Raphanus sativus cv Early Scarlet Globe
EV540207       --> GGGGACTGAACAAGATCATAGAGTGGGGTGAAGATGTCAAAAACAACAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552614       --> GGGGACTGAACAAGATCATAGAGTGGGGTGAAGATGTCAAAGACAACAAT  Raphanus raphanistrum subsp. landra
EV541531       --> GGGGACTGAACAAGATCATAGAGTGGGGTGAAGATGTCAAAGACAACAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984866       --> ..............................AAGATGTCAAAGACAACAAT  Raphanus raphanistrum subsp. landra

               401    -    451
UN23045        --> CTTTAGACCAGAGTATTGCTTCTGAAGCTTTGAAGCAGCTGCGTTAAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914160       <-- CTTTAGACCc........................................
FD964359       <-- CTTTAGACCAGAGTATTGCTTCTGAAGCTTTGAAGCAc............
EX894408       <-- CTTTAGACCAGAGTATTGCTTCTGAAGCTTTGAAGCAGCTGCGTTAAGCT
EV537258       <-- CTTTAGACCAGAGTATTGCTTCTGAAGCTTTGAAGCAGCTGCGTTAAGCT
EV552531       <-- CTTTAGACCAGAGTATTGCTTCTGAAGCTTTGAAGCAGCTGCGTTAAGCT
EX904552       <-- CTTTAGACCAGAGTATTGCTTCTGAAGCTTTGAAGCAGCTGCGTTAAGCT
EX769887       <-- CTTTAGACCAGAGTAT-GCTTCTGA-GCTT-GAAGCAGCTGCGTTA-GCT
EW714169       <-- ..TTAGACCAGAGTATTGCTTCTGAAGCTTTGAAGCAGCTGCGTTAAGCT
EV526573       <-- .......................GAAGCTTTGAAGCAGCTGCGTTAAGCT
FD540978       <-- .................................AGCAGCTGCGTTAAGCT
EV538213       <-- .........................................CGTTAAGCT
FD979685       <-- ..................................................
EV569993       <-- ..................................................
EV535842       <-- ..................................................
EV567491       <-- ..................................................
EX888973       <-- ..................................................
FD989031       <-- ..................................................
EV535558       <-- ..................................................
EY899945       <-- ..................................................
EY930809       <-- ..................................................
FD562201       <-- ..................................................
EW726723       <-- ..................................................
FD949400       <-- ..................................................
EX904120       <-- ..................................................
EY916326       <-- ..................................................
FD556277       <-- ..................................................
EW732949       <-- ..................................................
EY895609       --> CTTTAGACCAGAGTATTGCTTCTGAAGCTTTGAAGCAGCTGCGTTAAGCT
EY912022       --> CTTTAGACCAGAGTATTGCTTCTGAAGCTTTGAAGCAGCTGCGTTAAGCT
EX774111       --> CTTTAGACCAGAGTATTGCTTCTGAAGCTTTGAAGCAGCTGCGTTAAGCT
FD960390       --> CTTTAGACCAGAGTATTGCTTCTGAAGCTTTGAAGCAc............
EV574399       --> ..................................................
EV542279       --> CTTTAGACCAGAGTATTGCTTCTGAAGCTTTGAAGCAGATGCGTTAAGCT
FD945053       --> CTTTAGACCAGAGTATTGCTTCTGAAGCTTTGAAGCAGCTGCGTTAAGCT
EV540419       --> CTTTAGACCAGAGTATTGCTTCTGAAGCTTTGAAGCAGCTGCGTTAAGCT
EV547431       --> CTTTAGACCAGAGTATTGCTTCTGAAGCTTTGAAGCAGCTGCGTTAAGCT
EV572422       --> CTTTAGACCAGAGTACTGCTTCTGAAGCTTTGAAGCAGCTGCGTTAAGCT
EX898735       --> CTTTAGACCAGAGTATTGCTTCTGAAGCTTTGAAGCAGCTGCGTTAAGCT
EX908067       --> CTTTAGACCAGAGTATTGCTTCTGAAGCTTTGAAGCAGCTGCGTTAAGCT
FD537370       --> CTTTAGACCAGAGTATTGCTTCTGAAGCTTTGAAGCAGCTGCGTTAAGCT
FD566162       --> CTTTAGACCAGAGTATTGCTTCTGAAGCTTTGAAGCAGCTGCGTTAAGCT
EV531020       --> CTTTAGACCAGAGTATTGCTTCTGAAGCTTTGAAGCAGCTGCGTTAAGCT
EW729346       --> CTTTAGACCAGAGTATTGCTTCTGAAGCTTTGAAGCAGCTGCGTTAAGCT
EV540207       --> CTTTAGACCAGAGTATTGCTTCTGAAGCTTTGAAGCAGCTGCGTTAAGCT
FD552614       --> CTTTAGACCAGAGTATTGCTTCTGAAGCTTTGAAGCAGCTGCGTTAAGCT
EV541531       --> CTTTAGACCAGAGTATTGCTTCTGAAGCTTTGAAGCAGCTGCGTTAAGCT
FD984866       --> CTTTAGACCAGAGTATTGCTTCTGAAGCTTTGAAGCAGCTGC-ATAAGCT

               451    -    501
UN23045        --> TCTTGTTGAATT-GCTGAGCATCTGTATT-GAGTCTTGAAACACAACCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914160       <-- ..................................................
FD964359       <-- ..................................................
EX894408       <-- TCTTGTTGAATT-GCTGAGCATCTGTATT-GAGTCTTGAAACACAACCTT
EV537258       <-- TCTTGTTGAATT-GTTGAGCATCTGTATT-GAGTCTTGAAACACAACCTT
EV552531       <-- TCTTGTTGAATT-GCTGAGCATCTGTATT-GAGTCTTGAAACACAACCCT
EX904552       <-- TCTTGTTGAATT-GCTGAGCATCTGTATT-GAGTCTTGAAACACAACCTT
EX769887       <-- -CT-GTTGAAT--GCTGAGCATCTGTAT--GAGTCT-GAAACACAAC-TT
EW714169       <-- TCTTGTTGAATT-GCTGAGCATCTGTATT-GAGTCTTGAAACACAAC-TT
EV526573       <-- TCTTGTTGAATT-GCTGAGCATCTGTATT-GAGTCTTGACACACAACCTT
FD540978       <-- TCTTGTTGAATT-GCTGAGCATCTGTATT-GAGTCTTGAAACACAAC-TT
EV538213       <-- TCTTGTTGAATT-GCTGAGCATCTGTATA-GAGTCTTGAAACACAACCTT
FD979685       <-- ................................................TT
EV569993       <-- ..................................................
EV535842       <-- ..................................................
EV567491       <-- ..................................................
EX888973       <-- ..................................................
FD989031       <-- ..................................................
EV535558       <-- ..................................................
EY899945       <-- ..................................................
EY930809       <-- ..................................................
FD562201       <-- ..................................................
EW726723       <-- ..................................................
FD949400       <-- ..................................................
EX904120       <-- ..................................................
EY916326       <-- ..................................................
FD556277       <-- ..................................................
EW732949       <-- ..................................................
EY895609       --> TCTTGTTGAATT-GCTGAGCATCTGTATT-GAGTCTTGAAACACAACCTT
EY912022       --> TCTTGTTGAATT-GCTGAGCATCTGTATT-GAGTCTTGAAACACAACCTT
EX774111       --> TCTTGTTGAATT-GCTGAGCATCTGTATT-GAGTCTTGAAACACAACCTT
FD960390       --> ..................................................
EV574399       --> ..................................................
EV542279       --> TCTTGTTGAATT-GCTGAGCATCTGTATA-GAGTCTTGAAACACAACCTT
FD945053       --> TCTTGTTGAATT-GCTGAGCATCTGTATT-GAGTCTTGAAACACAACCTT
EV540419       --> TCTTGTTGAATT-GCTGAGCATCTGTATT-GAGTCTTGAAACACAACCTT
EV547431       --> TCTTGTTGAATT-GCTGAGCATCTGTATT-GAGTCTTGAAACACAACCCT
EV572422       --> TCTTGTTGAATT-GCTGAGCATCTGTATT-GAGTCTTGAAACACAACCTT
EX898735       --> TCTTGTTGAATT-GCTGAGCATCTGTATT-GAGTCTTGAAACACAACCTT
EX908067       --> TCTTGTTGAATT-GCTGAGCATCTGTATT-GAGTCTTGAAACACAACCTT
FD537370       --> TCTTGTTGAATT-GCTGAGCATCTGTATT-GAGTCTTGAAACACAACCTT
FD566162       --> TCTTGTTGAATT-GCTGAGCATCTGTATT-GAGTCTTGAAACACGACCTT
EV531020       --> TCTTGTTGAATT-GCTGAGCATCTGTATT-GAGTCTTGACACACAACCTT
EW729346       --> TCTTGTTGAATT-ACTGAGCATCTGTATT-GAGTCTTGAAACACAACCTT
EV540207       --> TCTTGTTGAATT-GCTGAGCATCTGTATT-GAGTCTTGAAACACAACCTT
FD552614       --> TCTTGTTGAATT-GCTGAGCATCTGTATT-GAGTCTTGAAACACAACCTT
EV541531       --> TCTTGTTGAATTTGTTGAGCATCTGTATTTGAGTCTTGAAACACAACCTT
FD984866       --> TCTTGTTGAATT-GCTGAGCATCTGTATT-GAGTCTTGAAACACAACCTT

               501    -    551
UN23045        --> TTT-CATGGAATCC-GAATAGGGTTCTTGCAGCTGGAAGACATCCC-GTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914160       <-- ..................................................
FD964359       <-- ..................................................
EX894408       <-- TTT-CATGGAATCC-GAATAGGGTTCTTGCAGCTGGAAGACATCCC-GTT
EV537258       <-- TTT-CATGGAATCC-GAACAGGGTTCTTGCAGCTGGAAGACATCCC-GTT
EV552531       <-- TTT-CATGGAACCC-GAATAGGGTTCTTGCAGCTGGAAGACATCCC-GTT
EX904552       <-- TTT-CATGGAATCC-GAATAGGGTTCTTGCAGCTGGAAGACATCCC-GTT
EX769887       <-- TTT-CATGGA-TC--GAATAGGGTTCT-GCAGCTGGAAGACATCCC-GTT
EW714169       <-- TTT-CATGGAATCC-GAATAGGGTTCTTGCAGCTGGAAGACATCCC-GTT
EV526573       <-- TTT-CATGGAATCC-GAATAGGGTTCTTGCAGCTGGAAGACATCCC-GTT
FD540978       <-- TTT-CATGGA-TCC-GAACAGGGTTCTTGCAGCTGGAAGACATCCC-GTT
EV538213       <-- TTTTCATGGAATCC-GAATAGGGTTCTTGCAGCTGGAAGACATCCC-GTT
FD979685       <-- TTT-CATGGA-TCA-GAATAGGGTTCT-GCAGCTGGAAGACATCCC-GTT
EV569993       <-- .TT-CATGGAATCC-GAATAGGGTTCTTGCAGCTGGAAGACATCCC-GTT
EV535842       <-- ..T-CATGGAATCC-GAACAGGGTTCTTGCAGCTGGAAGACATCCC-GTT
EV567491       <-- .......GGAATCC-GAATAGGGTTCTTGCAGCTGGAAGACATCAC-GTT
EX888973       <-- ..................TAGGGTTCTTGCAGCTGGAAGACATCCC-GTT
FD989031       <-- ..................TAGGGTTCT-GCAGCTGGAAGACATCCC-GTT
EV535558       <-- ...................AGGGTTCTTGCAGCTGGAAGACATCCC-GTT
EY899945       <-- .................aataggcTCTTGCAGCTGGAAGACACCCC-GTT
EY930809       <-- ...........................TGCAGCTGGAAGACATCCC-GTT
FD562201       <-- ....................tagggtcTGCAGCTGGAAGACATCCC-GTT
EW726723       <-- ............................GCAGCTGGAAGACATCCC-GTT
FD949400       <-- ...................................GAAGACATCCC-GTT
EX904120       <-- ..................................................
EY916326       <-- ..................................................
FD556277       <-- ..................................................
EW732949       <-- ..................................................
EY895609       --> TTT-CATGGAATCC-GAATAGGGCTCTTGCAGCTGGAAGACACCCC-GTT
EY912022       --> TTT-CATGGGATCC-GAATAGGGTTCTTGCAGCTGGAAGACATCCC-GTT
EX774111       --> TTT-CATGGAATCC-GAATAGGGTTCTTGCAGCTGGAAGACATCCC-GTT
FD960390       --> ..................................................
EV574399       --> ..................................................
EV542279       --> TTT-CATGGAATCC-GAATAGGGTTCTTGCAGCTGGAAGACATCCC-GTT
FD945053       --> TTT-CATGGAATCC-GAACAGGGTTCTTGCAGCTGGAAGACATCCC-GTT
EV540419       --> TTT-CATGGAATCC-GAACAGGGTTCTTGCAGCTGGAAGACATCCC-GTT
EV547431       --> TTT-CATGGAACCC-GAATAGGGTTCTTGCAGCTGGAAGACATCCC-GTT
EV572422       --> ----CATGGAATCC-GAATAGGGTTCTTGCAGCTGGAAGACATCAC-GTT
EX898735       --> TTT-CATGGAATCC-GAATAGGGTTCTTGCAGCTGGAAGACATCCC-GTT
EX908067       --> TTT-CATGGAATCC-GAATAGGGTTCTTGCAGCTGGAAGACATCCC-GTT
FD537370       --> TTT-CATGGAATCC-GAACAGGGTTCTTGCAGCTGGAAGACATCCC-GTT
FD566162       --> TTT-CATGGAATCC-GAATAGGGTTCTTGCAGCTGGAAGACATCCC-GTT
EV531020       --> TTT-CATGGAATCC-GAATAGGGTTCTTGCAGCTGGAAGACATCCC-GTT
EW729346       --> TTT-CATGGAATCC-GAATAGGGTTCTTGCAGCTGGAAGACATCCC-GTT
EV540207       --> TTT-CATGGAATCC-GAATAGGGTTCTTGCAGCTGGAAGACATCCC-GTT
FD552614       --> TTT-CATGGAATCC-GAATAGGGTTCTTGCAGCTGGAAGACATCCC-GTT
EV541531       --> TTTTCATGGAATCCCGAACAGGGTTCTTGCAGCTGGAAGACATCCCCGTT
FD984866       --> TTT-CATGGAATCC-GAATAGGGTTCTTGCAGCTGGAAGACATCCC-GTT

               551    -    601
UN23045        --> GGAGGCAGAGAAGTCACACCGATCTTCCTTGCCCC-AACCGCATACACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914160       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964359       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX894408       <-- GGAGGCAGAGAAGTCACACCGATCTTCCTTGCTCC-AACCGCATACACTT  Raphanus sativus cv Early Scarlet Globe
EV537258       <-- GGAGGCAGAGAAGTCACACCGATCTTCCTTGCCCC-AACCGCATACACTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552531       <-- GGAGGCAGAGAAGTCACACCGATCTTCCTTGCTCC-AACCGCATACACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX904552       <-- GGAGGCAGAGAAGTCACACCGATCTTCCTTGCTCC-AACCGCATACACTT  Raphanus sativus cv Rat-Tail Radish #3870
EX769887       <-- GGAGGCAGAGAAGTCACACCGATCTTCCTTGCCCC-AACCGCATATACTT  Raphanus raphanistrum subsp. landra
EW714169       <-- GGAGGCAGAGAAGTCACACCGATCTTCCTTGCTCC-AACCGCATACACTT  Raphanus sativus var. oleiformis
EV526573       <-- GGAGGCAGAGAAGTCACACCGATCTTCCTTGCCCC-AACCGCATATACTT  Raphanus raphanistrum subsp. maritimus
FD540978       <-- GGAGGCAGAGAAGTCACACCGATCTTCCTTGCCCC-AACCGCATACACTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538213       <-- GGAGGCAGAGAAGTCACACCGATCTTCCTTGCCCC-AACCGCATACACTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979685       <-- GGAGACAGAGAAGTGGCACCGATCTTCCTTGCCCC-AACCGCATATACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569993       <-- GGAGGCAGAGAAGTCACACCGATCTTCCTTGCCCC-AACCGCATATACTT  Raphanus raphanistrum subsp. landra
EV535842       <-- GGAGGCAGAGAAGTCACACCGATCTTCCTTGCCCC-AACCGCATACACTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567491       <-- GGAGGCAGAGAAGTCACACCGATCTTCCTTGCCCCCAACCGCATATACTT  Raphanus raphanistrum subsp. landra
EX888973       <-- GGAGGCAGAGAAGTCACACCGATCTTCCTTGCTCC-AACCGCATACACTT  Raphanus sativus var. oleiformis
FD989031       <-- GGAGGCAGAGAAGTCACACCGATCTTCCTTGCCCC-AACCGCATATACTT  Raphanus raphanistrum subsp. landra
EV535558       <-- GGAGGCAGAGAAGTCACACCGATCTTCCTTGCCCC-AACCGCATACACTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899945       <-- GGAGGCAGAGAAGTCACACCGATCTTCCTTGCCCC-AACCGCATATACTT  Raphanus raphanistrum subsp. maritimus
EY930809       <-- GGAGGCAGAGAAGTCACACCGATCTTCCTTGCTCC-AACCGCATACACTT  Raphanus sativus var. oleiformis
FD562201       <-- GGAGGCAGAGAAGTCACACCGATCTTCCTTGCTCC-AACCGCATACACTT  Raphanus sativus var. oleiformis
EW726723       <-- GGAGGCAGAGAAGTCACACCGATCTTCCTTGCTCC-AACCGCATACACTT  Raphanus sativus cv Early Scarlet Globe
FD949400       <-- GGAGGCAGAGAAGTCACACCGATCTTCCTTGCTCC-AACCGCATACACTT  Raphanus sativus cv Early Scarlet Globe
EX904120       <-- ..............................gctCC-AACCGCATACACTT  Raphanus sativus cv Rat-Tail Radish #3870
EY916326       <-- ...........................................TACACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556277       <-- ...........................................tatACTT  Raphanus raphanistrum subsp. landra
EW732949       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY895609       --> GGAGGCAGAGAAGTCACACCGATCTTCCTTGCCCC-AACCGCATATACTT  Raphanus raphanistrum subsp. maritimus
EY912022       --> GGAGGCAGAGAAGTCACACCGATCTTCCTTGCTCC-AACCGCATACACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774111       --> GGAGGCAGAGAAGTCACACCGATCTTCCTTGCCCC-AACCGCATATACTT  Raphanus raphanistrum subsp. landra
FD960390       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV574399       --> ..................................................  Raphanus raphanistrum subsp. landra
EV542279       --> GGAGGCAGAGAAGTCACACCGATCTTCCTTGCCCC-AACCGCATACACTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945053       --> GGAGGCAGAGAAGTCACACCGATCTTCCTTGCTCC-AACCGCATACACTT  Raphanus sativus cv Early Scarlet Globe
EV540419       --> GGAGGCAGAGAAGTCACACCGATCTTCCTTGCCCC-AACCGCATACACTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547431       --> GGAGGCAGAGAAGTCACACCGATCTTCCTTGCTCC-AACCGCATACACTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572422       --> GGAGGCAGAGAAGTCACACCGATCTTCCTTGCCCC-AACCGCATATACTT  Raphanus raphanistrum subsp. landra
EX898735       --> GGAGGCAGAGAAGTCACACCGATCTTCCTTGCTCC-AACCGCATACACTT  Raphanus sativus cv Early Scarlet Globe
EX908067       --> GGAGGCAGAGAAGTCACACCGATCTTCCTTGCTCC-AACCGCATACACTT  Raphanus sativus cv Rat-Tail Radish #3870
FD537370       --> GGAGGCAGAGAAGTCACACCGATCTTCCTTGCCCC-AACCGCATACACTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566162       --> GGAGGCAGAGAAGTCACACCGATCTTCCTTGCTCC-AACCGCATACACTT  Raphanus sativus var. oleiformis
EV531020       --> GGAGGCAGAGAAGTCACACCGATCTTCCTTGCCCC-AACCGCATATACTT  Raphanus raphanistrum subsp. maritimus
EW729346       --> GGAGGCAGAGAAGTCACACCGATCTTCCTTGCTCC-AACCGCATACACTT  Raphanus sativus cv Early Scarlet Globe
EV540207       --> GGAGGCAGAGAAGTCACACCGATCTTCCTTGCCCC-AACCGCATACACTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552614       --> GGAGGCAGAAAAGTCACACCGATCTTCCTTGCCCC-AACCGCATATACTT  Raphanus raphanistrum subsp. landra
EV541531       --> GGAGGCAGA.........................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984866       --> GGAGGCAGAAAAGTCACACCGATCTTCCTTGCCCC-AACCGCATATACTT  Raphanus raphanistrum subsp. landra

               601    -    651
UN23045        --> GCTTGATAAATGTAGAGAAGTTATCAAGAAGCATAGATCCGTACTGATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914160       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964359       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX894408       <-- GCTTGATAAATGTAGAGAAGTTATCAAGAAGCATAGATCCATACTGATCA  Raphanus sativus cv Early Scarlet Globe
EV537258       <-- GCTTGATAAATGTAGAGAAGTTATCAAGAAGCATAGATCCGTACTGATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552531       <-- GCTTGATAAATGTAGAGAAGTTATCAAGAAGCATAGATCCATACTGATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX904552       <-- GCTTGATAAATGTAGAGAAGTTATCAAGAAGCATAGATCCATACTGATCA  Raphanus sativus cv Rat-Tail Radish #3870
EX769887       <-- GCTTGATAAATGTAGAGAAGCTATCAAGAAGCATAGATCCGTACTGATCA  Raphanus raphanistrum subsp. landra
EW714169       <-- GCTTGATAAATGTAGAGAAGTTATCAAGAAGCATAGATCCATACTGATCA  Raphanus sativus var. oleiformis
EV526573       <-- GCTTGATAAATGTAGAGAAGCTATCAAGAAGCATAGATCCGTACTGATCA  Raphanus raphanistrum subsp. maritimus
FD540978       <-- GCTTGATAAATGTAGAGAAGTTATCAAGAAGCATAGATCCGTACTGATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538213       <-- GCTTGATAAATGTAGAGAAGTTATCAAGAAGCATAGAGCCGTACTGATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979685       <-- GCTTGATAAATGTAGAGAAGCTATCAAGAAGCATAGATCCGTACTGATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569993       <-- GCTTGATAAATGTAGAGAAGCTATCAAGAAGCATAGATCCGTACTGATCA  Raphanus raphanistrum subsp. landra
EV535842       <-- GCTTGATAAATGTAGAGAAGTTATCAAGAAGCATAGATCCGTACTGATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567491       <-- GCTTGATAAATGTAGAGAAGATATCAAGAAGCATAGATCCGTACTGATCA  Raphanus raphanistrum subsp. landra
EX888973       <-- GCTTGATAAATGTAGAGAGGTTATCAAGAAGCATAGATCCATACTGATCA  Raphanus sativus var. oleiformis
FD989031       <-- GCTTGATAAATGTAGAGAAGCTATCAAGAAGCATAGATCCGTACTGATCA  Raphanus raphanistrum subsp. landra
EV535558       <-- GCTTGATAAATGTAGAGAAGTTATCAAGAAGCATAGAGCCGTACTGATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899945       <-- GCTTGATAAATGTAGAGAAGCTATCAAGAAGCATAGATCCGTACTGATCA  Raphanus raphanistrum subsp. maritimus
EY930809       <-- GCTTGATAAATGTAGAGAAGTTATCAAGAAGCATAGATCCATACTGATCA  Raphanus sativus var. oleiformis
FD562201       <-- GCTTGATAAATGTAGAGAAGTTATCAAGAAGCATAGATCCATACTGATCA  Raphanus sativus var. oleiformis
EW726723       <-- GCTTGATAAATGTAGAGAAGTTATCAAGAAGCATAGATCCATACTGATCA  Raphanus sativus cv Early Scarlet Globe
FD949400       <-- GCTTGATAAATGTAGAGAAGTTATCAAGAAGCATAGATCCATACTGATCA  Raphanus sativus cv Early Scarlet Globe
EX904120       <-- GCTTGATAAATGTAGAGAAGTTATCAAGAAGCATAGATCCATACTGATCA  Raphanus sativus cv Rat-Tail Radish #3870
EY916326       <-- GCTTGATAAATGTAGAGAAGTTATCAAGAAGCATAGAGCCGTACTGATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556277       <-- GCTTGATAAATGTAGAGAAGCTATCAAGAAGCATAGATCCGTACTGATCA  Raphanus raphanistrum subsp. landra
EW732949       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY895609       --> GCTTGATAAATGTAGAGAAGCTATCAAGAAGCATAGATCCGTACTGATCA  Raphanus raphanistrum subsp. maritimus
EY912022       --> GCTTGATAAATGTAGAGAAGTTATCAAGAAGCATAGAGCCGTACTGATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774111       --> GCTTGATAAATGTAGAGAAGCTATCAAGAAGCATAGATCCGTACTGATCA  Raphanus raphanistrum subsp. landra
FD960390       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV574399       --> ..................................................  Raphanus raphanistrum subsp. landra
EV542279       --> GCTTGATAAATGTAGAGAAGTTATCAAGAAGCATAGAGCCGTACTGATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945053       --> GCTTGATAAATGTAGAGAAGTTATCAAGAAGCATAGATCCATACTGATCA  Raphanus sativus cv Early Scarlet Globe
EV540419       --> GCTTGATAAATGTAGAGAAGTTATCAAGAAGCATAGATCCGTACTGATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547431       --> GCTTGATAAATGTAGAGAAGTTATCAAGAAGCATAGATCCATACTGATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572422       --> GCTTGATAAAT.......................................  Raphanus raphanistrum subsp. landra
EX898735       --> GCTTGATAAATGTAGAGAAGTTATCAAGAAGCATAGATCCATACTGATCA  Raphanus sativus cv Early Scarlet Globe
EX908067       --> GCTTGATAAATGTAGAGAAGTTATCAAGAAGCATAGATCCATACTGATCA  Raphanus sativus cv Rat-Tail Radish #3870
FD537370       --> GCTTGATAAATGTAGAGAAGTTATCAAGAAGCATAGATCCGTACTGATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566162       --> GCTTGATAAATGTAGAGAAGTTATCAAGAAGCATAGATCCATACTGATCA  Raphanus sativus var. oleiformis
EV531020       --> GCTTGATAAATGTAGAGAAGCTATCAAGAAGCATAGATCCGTACTGATCA  Raphanus raphanistrum subsp. maritimus
EW729346       --> GCTTGATAAATGTAGAGAAGTTATCAAGAAGCATAGATCCATACTGATCA  Raphanus sativus cv Early Scarlet Globe
EV540207       --> GCTTGATAAATGTAGAGAAGTTATCAAGAAGCATAGAGCCGTACTGATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552614       --> GCTTGATAAATGTAGAGAAGCTATCAAGAAG...................  Raphanus raphanistrum subsp. landra
EV541531       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984866       --> GCTTGATAAATGTAGAGAAGCTATCAAGAAGCATAGATCCGTACTGATCA  Raphanus raphanistrum subsp. landra

               651    -    701
UN23045        --> GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914160       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964359       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX894408       <-- GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA  Raphanus sativus cv Early Scarlet Globe
EV537258       <-- GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552531       <-- GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX904552       <-- GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACGA  Raphanus sativus cv Rat-Tail Radish #3870
EX769887       <-- GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA  Raphanus raphanistrum subsp. landra
EW714169       <-- GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACGA  Raphanus sativus var. oleiformis
EV526573       <-- GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA  Raphanus raphanistrum subsp. maritimus
FD540978       <-- GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538213       <-- GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979685       <-- GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569993       <-- GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA  Raphanus raphanistrum subsp. landra
EV535842       <-- GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567491       <-- GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA  Raphanus raphanistrum subsp. landra
EX888973       <-- GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACGA  Raphanus sativus var. oleiformis
FD989031       <-- GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA  Raphanus raphanistrum subsp. landra
EV535558       <-- GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899945       <-- GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA  Raphanus raphanistrum subsp. maritimus
EY930809       <-- GGAGTGTAGACTTTGTTAAGGAGAGGATTCACATAATAA-TTTTGAACGA  Raphanus sativus var. oleiformis
FD562201       <-- GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACGA  Raphanus sativus var. oleiformis
EW726723       <-- GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA  Raphanus sativus cv Early Scarlet Globe
FD949400       <-- GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA  Raphanus sativus cv Early Scarlet Globe
EX904120       <-- GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACGA  Raphanus sativus cv Rat-Tail Radish #3870
EY916326       <-- GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556277       <-- GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA  Raphanus raphanistrum subsp. landra
EW732949       <-- ...................aggagGGATTCACATAATAAATTTTGAACAA  Raphanus sativus cv Rat-Tail Radish #3870
EY895609       --> GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA  Raphanus raphanistrum subsp. maritimus
EY912022       --> GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774111       --> GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA  Raphanus raphanistrum subsp. landra
FD960390       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV574399       --> ..................................................  Raphanus raphanistrum subsp. landra
EV542279       --> GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945053       --> GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA  Raphanus sativus cv Early Scarlet Globe
EV540419       --> GGAGTGTAGACTTTGTTAAGA.............................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547431       --> GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572422       --> ..................................................  Raphanus raphanistrum subsp. landra
EX898735       --> GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA  Raphanus sativus cv Early Scarlet Globe
EX908067       --> GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACGA  Raphanus sativus cv Rat-Tail Radish #3870
FD537370       --> GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566162       --> GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACGA  Raphanus sativus var. oleiformis
EV531020       --> GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA  Raphanus raphanistrum subsp. maritimus
EW729346       --> GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA  Raphanus sativus cv Early Scarlet Globe
EV540207       --> GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552614       --> ..................................................  Raphanus raphanistrum subsp. landra
EV541531       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984866       --> GGAGTGTAGACTTTGTTAAGAAGAGGATTCACATAATAA-TTTTGAACAA  Raphanus raphanistrum subsp. landra

               701    -    751
UN23045        --> A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914160       <-- ..................................................
FD964359       <-- ..................................................
EX894408       <-- A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
EV537258       <-- A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATAATCG
EV552531       <-- A-GTCTCTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
EX904552       <-- A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
EX769887       <-- A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
EW714169       <-- A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
EV526573       <-- A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
FD540978       <-- A-GTCACTGCTTCCTGCACTTAAGAGATAGAGAGCTCC-CTTAATGATCG
EV538213       <-- A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
FD979685       <-- A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
EV569993       <-- A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
EV535842       <-- A-GTCACTGCTTCCTGCACTTAAGAGATAGAGAGCTCC-CTTAATGATCG
EV567491       <-- A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
EX888973       <-- A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
FD989031       <-- A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
EV535558       <-- A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
EY899945       <-- A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
EY930809       <-- A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
FD562201       <-- A-GTCACTGCT-CCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
EW726723       <-- A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
FD949400       <-- A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
EX904120       <-- A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCCTCTTAATGATCG
EY916326       <-- A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAGTGATCG
FD556277       <-- A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
EW732949       <-- AAGTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
EY895609       --> A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAA......
EY912022       --> A-GTCACTG.........................................
EX774111       --> A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
FD960390       --> ..................................................
EV574399       --> ..................................................
EV542279       --> A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
FD945053       --> A-GTCACTGCTTCCTGCAC...............................
EV540419       --> ..................................................
EV547431       --> A-GTCTCTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
EV572422       --> ..................................................
EX898735       --> A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
EX908067       --> A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
FD537370       --> A-GTCACTGCTTCCTGCACTTAAGAGATAGAGAGCTCC-CTTAATGATCG
FD566162       --> A-GTCACTGCT-CCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
EV531020       --> A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
EW729346       --> A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
EV540207       --> A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG
FD552614       --> ..................................................
EV541531       --> ..................................................
FD984866       --> A-GTCACTGCTTCCTGCACTTAAGAGATAGAGTGCTCC-CTTAATGATCG

               751    -    801
UN23045        --> TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGTACTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914160       <-- ..................................................
FD964359       <-- ..................................................
EX894408       <-- TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGC...............
EV537258       <-- TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGTACTCC
EV552531       <-- TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGTACTCC
EX904552       <-- TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGTACTCC
EX769887       <-- TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGTACTCC
EW714169       <-- TATCAGATTGTTTGCTTCCTGCAAATTTTATGAGCTTGCTCTTGTACTCC
EV526573       <-- TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGCACTCC
FD540978       <-- TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTTTTGTACTCC
EV538213       <-- TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGTACTCC
FD979685       <-- TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGTACTCC
EV569993       <-- TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGTACTCC
EV535842       <-- TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTTTTGTACTCC
EV567491       <-- TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGTACTCC
EX888973       <-- TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGTACTCC
FD989031       <-- TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGTACTCC
EV535558       <-- TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGTACTCC
EY899945       <-- TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGTACTCC
EY930809       <-- TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGTACTCC
FD562201       <-- TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGTACTCC
EW726723       <-- TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGTACTCC
FD949400       <-- TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGTACTCC
EX904120       <-- TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGTACTCC
EY916326       <-- TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGTACTCC
FD556277       <-- TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGTACTCC
EW732949       <-- TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGTACTCC
EY895609       --> ..................................................
EY912022       --> ..................................................
EX774111       --> TATC..............................................
FD960390       --> ..................................................
EV574399       --> ..................................................
EV542279       --> TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGTACTCC
FD945053       --> ..................................................
EV540419       --> ..................................................
EV547431       --> TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGTACTCC
EV572422       --> ..................................................
EX898735       --> TATCAGATTGTTTGCTTCCTGCAACT........................
EX908067       --> TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGTACTCC
FD537370       --> TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCT..............
FD566162       --> TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGTACTCC
EV531020       --> TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGCACTCC
EW729346       --> TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGTACTCC
EV540207       --> TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGTACTCC
FD552614       --> ..................................................
EV541531       --> ..................................................
FD984866       --> TATCAGATTGTTTGCTTCCTGCAACTTTTATGAGCTTGCTCTTGTACTCC

               801    -    851
UN23045        --> TTGAAGTACTCAACTTGCTGATACAA-TGGAATCGCATG---ATTGAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914160       <-- ..................................................
FD964359       <-- ..................................................
EX894408       <-- ..................................................
EV537258       <-- TTGAAGTACTCAACTTGCTGATc...........................
EV552531       <-- TTGAAGTACTCAACTTGCTGATACAA-TGGAATCGCATG---ATTGAGAA
EX904552       <-- TTGAAGTACTCAACTTGCTGATACAA-TGGAATCGCATG---ATTGAGAA
EX769887       <-- TTGAAGTACTCAACTTGCTGATACAA-TGGAATCGCATG---ATTGAGAA
EW714169       <-- TTGAAGTACTCAACTTGCTGATACAA-TGGAATCGCATG---ATTGAGAA
EV526573       <-- TTGAAGTACTCAACTTGCTGATACAA-TGGAATCGCATG---ATTGAGAA
FD540978       <-- TTGAAGTACTCAACTTGCTGATACAA-TGGAATCGCATG---ATTGAGAA
EV538213       <-- TTGAAGTACTCAACTTGCTGATACAA-TGGAATCGCATG---ATTGAGAA
FD979685       <-- TTGAAGTACTCAACTTGCTGATACAA-TGGAATCGCATG---ATTGAGAA
EV569993       <-- TTGAAGTACTCAACTTGCTGATACAA-TGGAATCGCATG---ATTGAGAA
EV535842       <-- TTGAAGTACTCAACTTGCTGATACAA-TGGAATCGCATG---ATTGAGAA
EV567491       <-- TTGAAGTACTCAACTTGCTGATACAA-TGGAATCGCATG---ATTGAGAA
EX888973       <-- TTGAAGTACTCAACTTGTTGATACAA-TGGAATCGCATGCTGATTGAGAA
FD989031       <-- TTGAAGTACTCAACTTGCTGATACAA-TGGAATCGCATG---ATTGAGAA
EV535558       <-- TTGAAGTACTCAACTTGCTGATACAA-TGGAATCGCATG---ATTGAGAA
EY899945       <-- TTGAAGTAATCAACTTGCTGATACAA-TGGAATCGCATG---ATTGAGAA
EY930809       <-- TTGAAGTACTCAACTTGCTGATACAA-TGGAATCGCATG---ATTGAGAA
FD562201       <-- TTGAAGTACTCAACTTGCTGATACAA-TGGAATCGCATG---ATTGAGAA
EW726723       <-- TTGAAGTACTCAACTTGCTGATACAA-TGGAATCGCATG---ATTGAGAA
FD949400       <-- TTGAAGTACTCAACTTGCTGATACAA-TGGAATCGCATG---ATTGAGAA
EX904120       <-- TTGAAGTACTCAACTTGCTGATACAAATGGAATCGCATG---ATTGAGAA
EY916326       <-- TTGAAGTACTCAACTTGC-GATACAA-TGGAATCGCATG---ATTGAGAA
FD556277       <-- TTGAAGTACTCAACTTGCTGATACAA-TGGAATCGCATG---ATTGAGAA
EW732949       <-- TTGAAGTACTCAACTTGCTGATACAA-TGGAATCGCATG---ATTGAGAA
EY895609       --> ..................................................
EY912022       --> ..................................................
EX774111       --> ..................................................
FD960390       --> ..................................................
EV574399       --> ..................................................
EV542279       --> TT................................................
FD945053       --> ..................................................
EV540419       --> ..................................................
EV547431       --> TTGAAGTACTCAACTTGCTGATACAA-TGGAATCGCATG---ATTGAGAA
EV572422       --> ..................................................
EX898735       --> ..................................................
EX908067       --> TTGAAGTACTCAACTTGCTGATACA--TGGAATCGCATG...........
FD537370       --> ..................................................
FD566162       --> TTGAAGTACTCAACTTGCTGATACAA-TGGAATCGCATG---ATTGAGA-
EV531020       --> TTGAAGTACTCAACTTGCTGATACAA-TGGAATCGCATG---ATTGAGAA
EW729346       --> TTGAAGTACTCAACTTGCTGATACA--TGGAATCGCATG---ATTGAGA-
EV540207       --> TTGAAGTACTCAACTTGCTGATACAA-TGGAATCGCATG---ATTGAGAA
FD552614       --> ..................................................
EV541531       --> ..................................................
FD984866       --> TTGAAGTACTCAACTTGCTGATACAA-TGGAATCGCATG---ATTGAGAA

               851    -    901
UN23045        --> G-AGCGG-CTTTGTCATCGTAACCTGAAGCTGCAGAAGCGAAA-TTAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914160       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964359       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX894408       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV537258       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552531       <-- G-AGCGG-CTTTGTCATCGTAACCCGAAGCTGCAGAAGCGAAA-TTAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX904552       <-- G-AGCGG-CTTTGTCATCGTAACCCGAAGCTGCAGAAGCGAAA-TTAGCA  Raphanus sativus cv Rat-Tail Radish #3870
EX769887       <-- G-AGCGG-CTTTGTCATCGTAACCTGAAGCTGCAGAAGCGAAA-TTAGCA  Raphanus raphanistrum subsp. landra
EW714169       <-- G-AGCGG-CTTTGTCATCGTAACCCGAAGCTGCAGAAGCGAAA-TTAGCA  Raphanus sativus var. oleiformis
EV526573       <-- G-AGCGG-CTTTGTCATCGTAACCTGAAGCTGCAGAAGCGAAA-TTAGCA  Raphanus raphanistrum subsp. maritimus
FD540978       <-- G-AGCGG-CTTTGTCATCGTAACCTGAAGCTGCAGAAGCGAAA-TTAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538213       <-- G-AGCGG-CTTTGTCATCGTAACCTGAAGCTGCGGAAGCGAAA-TTAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979685       <-- G-AGCGG-CTTTGTCATCGTAACCTGAAGCTGCAGAAGCGAAA-TTAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569993       <-- G-AGCGG-CTTTGTCATCGTAACCTGAAGCTGCAGAAGCGAAA-TTAGCA  Raphanus raphanistrum subsp. landra
EV535842       <-- G-AGCGG-CTTTGTCATCGTAACCTGAAGCTGCAGAAGCGAAA-TTAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567491       <-- G-AGCGG-CTTTGTCATCGTAACCTGAAGCTGCAGAAGCGAAA-TTAGCA  Raphanus raphanistrum subsp. landra
EX888973       <-- G-AGCGG-CTTTGTCATCGTAACCCGAAGCTGCAGAAGCGAAA-TTAGCA  Raphanus sativus var. oleiformis
FD989031       <-- G-AGCGG-CTTTGTCATCGTAACCTGAAGCTGCAGAAGCGAAA-TTAGCA  Raphanus raphanistrum subsp. landra
EV535558       <-- G-AGCGG-CTTTGTCATCGTAACCTGAAGCTGCGGAAGCGAAA-TTAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899945       <-- G-AGCGG-CTTTGTCATCGTAACCTGAAGCTGCAGAAGCGAAA-TTAGCA  Raphanus raphanistrum subsp. maritimus
EY930809       <-- G-AGCGG-CTTTGTCATCGTAACCCGAAGCTGCAGAAGCGAAA-TTAGCA  Raphanus sativus var. oleiformis
FD562201       <-- G-AGCGG-CTTTGTCATCGTAACCCGAAGCTGCAGAAGCGAAA-TTAGCA  Raphanus sativus var. oleiformis
EW726723       <-- G-AGCGG-CTTTGTCATCGTAACCTGAAGCTGCGGAAGCGAAA-TTAGCA  Raphanus sativus cv Early Scarlet Globe
FD949400       <-- G-AGCGG-CTTTGTCATCGTAACCTGAAGCTGCGGAAGCGAAA-TTAGCA  Raphanus sativus cv Early Scarlet Globe
EX904120       <-- GGAGCGGGCTTTGTCATCGTAACCCGAAGCTGCAGAAGCGAAAATTAGCA  Raphanus sativus cv Rat-Tail Radish #3870
EY916326       <-- G-AGCGG-CTTTGTCATCGTAACCCGGAGCTGCAGAAGCGAAA-TTAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556277       <-- G-AGCGG-CTTTGTCATCGTAACCTGAAGCTGCAGAAGCGAAA-TTAGCA  Raphanus raphanistrum subsp. landra
EW732949       <-- G-AGCGG-CTTTGTCATCGTAACCTGAAGCTGCAGAAGCGAAA-TTAGCA  Raphanus sativus cv Rat-Tail Radish #3870
EY895609       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY912022       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774111       --> ..................................................  Raphanus raphanistrum subsp. landra
FD960390       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV574399       --> ..................................................  Raphanus raphanistrum subsp. landra
EV542279       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945053       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV540419       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547431       --> G-AGCGG-CTTTGTCATCGTAACCcga.......................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572422       --> ..................................................  Raphanus raphanistrum subsp. landra
EX898735       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX908067       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD537370       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566162       --> G-AGCGG-CTTTGTCATCGTAA............................  Raphanus sativus var. oleiformis
EV531020       --> G-AGCGG-CTTTGTCATCGTAACCTGAAGCTGCAGAAGCGAAA-TTAGCA  Raphanus raphanistrum subsp. maritimus
EW729346       --> G-AGCGG-CTTTGTCATCGTA-CCTGAAGCTGC-GGAGCGAAt.......  Raphanus sativus cv Early Scarlet Globe
EV540207       --> G-AGCGG-CTT-GTCATCGTAACCTGAAGCTGCGGAAGCGAAA-TTAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552614       --> ..................................................  Raphanus raphanistrum subsp. landra
EV541531       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984866       --> G-AGCGG-CTTTGTCATCGT..............................  Raphanus raphanistrum subsp. landra

               901    -    951
UN23045        --> CCAATGAGAAGGTTCTTGCCTGAAGCTTCGGGGCTTAGATAAGCTGGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914160       <-- ..................................................
FD964359       <-- ..................................................
EX894408       <-- ..................................................
EV537258       <-- ..................................................
EV552531       <-- CCAATGAGAAGGTTCTTGCCTGAAGCTTCGGGGCTc..............
EX904552       <-- CCAATGAGAAGGTTCTTGCCTGAAGCTTCGGGGCTTAGATAAGCTGGTGG
EX769887       <-- CCAATGAGAAGGTTCTTGCCTGAAGCTTCGGGGCTTAGATAAGCTGGTGG
EW714169       <-- CCAATGAGAAGGTTCTTGCCTGAAGCTACGGGGCTTAGATAAGCTGGTGG
EV526573       <-- CCAATGAGAAGGTTCTTGCCTGAAGCTTCGGGGCTTAGATAAGCTGGTGG
FD540978       <-- CCAATGAGAAGGTTCTTGCCTGAAGCTTCGGGGCTTAGATAAGCTGGTGG
EV538213       <-- CCAATGAGAAGGTTCTTGCCTGAAGCTTCGGGGCTTAGATAAGCTGGTGG
FD979685       <-- CCAATGAGAAGGTTCTTGCCTGAAGCTTCGGGGCTTAGATAAGCTGGTGG
EV569993       <-- CCAATGAGAAGGTTCTTGCCTGAAGCTTCGGGGCTTAGATAAGCTGGTGG
EV535842       <-- CCAATGAGAAGGTTCTTGCCTGAAGCTTCGGGGCTTAGATAAGCTGGTGG
EV567491       <-- CCAATGAGAAGGTTCTTGCCTGAAGCTTCGGGGCTTAGATAAGCTGGTGG
EX888973       <-- CCAATGAGAAGGTTCTTGCCTGAAGCTTCGGGGCTTAGATAAGCTGGTGG
FD989031       <-- CCAATGAGAAGGTTCTTGCCTGAAGCTTCGGGGCTTAGATAAGCTGGTGG
EV535558       <-- CCAATGAGAAGGTTCTTGCCTGAAGCTTCGGGGCTTAGATAAGCTGGTGG
EY899945       <-- CCAATGAGAAGGTTCTTGCCTGAAGCTTCGGGGCTTAGATAAGCTGGTGG
EY930809       <-- CCAATGAGAAGGTTCTTGCCTGAAGCTTCGGGGCTTAGATAAGCTGGTGG
FD562201       <-- CCAATGAGAAGGTTCTTGCCTGAAGCTTCGGGGCTTGGATAAGCTGGTGG
EW726723       <-- CCAATGAGAAGGTTCTTGCCTGAAGCTTCGGGGCTTAGATAAGCTGGTGG
FD949400       <-- CCAATGAGAAGGTTCTTGCCTGAAGCTTCGGGGCTTAGATAAGCTGGTGG
EX904120       <-- CCAATGAGAAGGTTCTTGCCTGAAGCTTCGGGGCTTAGATAAGCTGGTGG
EY916326       <-- CCAATGAGAAGGTTCTTGCCTGAAGCTTCGGGGCTTAGATAAGCTGGTGG
FD556277       <-- CCAATGAGAAGGTTCTTGCCTGAAGCTTCGGGGCTTAGATAAGCTGGTGG
EW732949       <-- CCAATGAGAAGGTTCTTGCCTGAAGCTTCGGGGCTTAGATAAGCTGGTGG
EY895609       --> ..................................................
EY912022       --> ..................................................
EX774111       --> ..................................................
FD960390       --> ..................................................
EV574399       --> ..................................................
EV542279       --> ..................................................
FD945053       --> ..................................................
EV540419       --> ..................................................
EV547431       --> ..................................................
EV572422       --> ..................................................
EX898735       --> ..................................................
EX908067       --> ..................................................
FD537370       --> ..................................................
FD566162       --> ..................................................
EV531020       --> CCAATGAG..........................................
EW729346       --> ..................................................
EV540207       --> CCAATGA...........................................
FD552614       --> ..................................................
EV541531       --> ..................................................
FD984866       --> ..................................................

               951    -   1001
UN23045        --> GTATTTAGTGAACCCTAGTGTCTCAGCGGTAATATCAGTGGCTAATTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914160       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964359       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX894408       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV537258       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552531       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX904552       <-- GTATTTAGTGAACCCTAGTGTCTCAGCGGTAATATCAGTGGCTAATTTGC  Raphanus sativus cv Rat-Tail Radish #3870
EX769887       <-- GTATTTAGTGAACCCTAGTGTCTCAGCGGTAATGTCAGTGGCTAGTTTGC  Raphanus raphanistrum subsp. landra
EW714169       <-- GTATTTAGTGAACCCTAGTGTCTCAGCGGTAATATCAGTGGCTAATTTGC  Raphanus sativus var. oleiformis
EV526573       <-- GTATTTAGTGAACCCTAGTGTCTCAGCGGTAATATCAGTGGCTAGTTTGC  Raphanus raphanistrum subsp. maritimus
FD540978       <-- GTATTTAGTGAATCCTAGTGTCTCAGCGGTGATATCAGTGGCTAATTTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538213       <-- GTATTTAGTGAACCCTAGTGTCTCAGCGGTAATATCAGTGGCTAATTTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979685       <-- GTATTTAGTGAACCCTAGTGTCTCAGCGGTAATATCAGTGGCTAGTTTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569993       <-- GTATTTAGTGAACCCTAGTGTCTCAGCGGTAATATCAGTGGCTAGTTTGC  Raphanus raphanistrum subsp. landra
EV535842       <-- GTATTTAGTGAATCCTAGTGTCTCAGCGGTGATATCAGTGGCTAATTTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567491       <-- GTATTTAGTGAACCCTAGTGTCTCAGCGGTAATATCAGTGGCTAGTTTGC  Raphanus raphanistrum subsp. landra
EX888973       <-- GTATTTAGTGAACCCTAGTGTCTCAGCGGTAATATCAGTGGCTAATTTGC  Raphanus sativus var. oleiformis
FD989031       <-- GTATTTAGTGAACCCTAGTGTCTCAGCGGTAATATCAGTGGATAGTTTGC  Raphanus raphanistrum subsp. landra
EV535558       <-- GTATTTAGTGAACCCTAGTGTCTCAGCGGTAATATCAGTGGCTAATTTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899945       <-- GTATTTAGTGAACCCTAGTGTCTCAGCGGTAATATCAGTGGCTAGTTTGC  Raphanus raphanistrum subsp. maritimus
EY930809       <-- GTATTTAGTGAACCCTAGTGTCTCAGCGGTAATATCAGTGGCTAATTTGC  Raphanus sativus var. oleiformis
FD562201       <-- GTATTTAGTGAACCCTAGTGTCTCAGCGGTAATATCAGTGGCTAATTTGC  Raphanus sativus var. oleiformis
EW726723       <-- GTATTTAGTGAACCCTAGTGTCTCAGCGGTAATATCAGTGGCTAATTTGC  Raphanus sativus cv Early Scarlet Globe
FD949400       <-- GTATTTAGTGAACCCTAGTGTCTCAGCGGTAATATCAGTGGCTAATTTGC  Raphanus sativus cv Early Scarlet Globe
EX904120       <-- GTATTTAGTGAACCCTAGTGTCTCAGCGGTAATATCAGTGGCTAATTTGC  Raphanus sativus cv Rat-Tail Radish #3870
EY916326       <-- GTATTTAGTGAACCCTAGTGTCTCAGCGGTAATATCAGTGGCTAATTTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556277       <-- GTATTTAGTGAACCCTAGTGTCTCAGCGGTAATATCAGTGGCTAGTTTGC  Raphanus raphanistrum subsp. landra
EW732949       <-- GTATTTAGTGAACCCTAGTGTCTCAGCGGTAATATCAGTGGCTAGTTTGC  Raphanus sativus cv Rat-Tail Radish #3870
EY895609       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY912022       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774111       --> ..................................................  Raphanus raphanistrum subsp. landra
FD960390       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV574399       --> ..................................................  Raphanus raphanistrum subsp. landra
EV542279       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945053       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV540419       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547431       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572422       --> ..................................................  Raphanus raphanistrum subsp. landra
EX898735       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX908067       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD537370       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566162       --> ..................................................  Raphanus sativus var. oleiformis
EV531020       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW729346       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV540207       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552614       --> ..................................................  Raphanus raphanistrum subsp. landra
EV541531       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984866       --> ..................................................  Raphanus raphanistrum subsp. landra

               1001   -   1051
UN23045        --> CGTTGCAGAAACGGCCGGTGGGTTTGTGGCCAGCAAAATCACGGCCATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914160       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964359       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX894408       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV537258       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552531       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX904552       <-- CGTTGCAGAAGCGGCCTGTGGGTTTGc.......................  Raphanus sativus cv Rat-Tail Radish #3870
EX769887       <-- CGTTGCTGAAACGGCCGGTGGGTTTGTGGCCAGCAAAATCACGGCCATAA  Raphanus raphanistrum subsp. landra
EW714169       <-- CGTTGCAGAAGCGGCCTGTGGGTTTGTGGCCAGCAAAATCACGGCCATAA  Raphanus sativus var. oleiformis
EV526573       <-- CGTTGCAGAAACGGCCGGTGGGTTTGTGGCCAGCAAAATCACGGCCATAA  Raphanus raphanistrum subsp. maritimus
FD540978       <-- CGTTGCAGAAACGGCCTGTGGGTTTGTGGCCAGCAAAATCACGGCCATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538213       <-- CGTTGCAGAAACGGCCGGTGGGTTTGTGGCCAGCAAAATCACGGCCATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979685       <-- CGTTGCAGAAACGGCCGGTGGGTTTGTGGCCAGCAAAATCACGGCCATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569993       <-- CGTTGCAGAAACGGCCGGTGGGTTTGTGGCCAGCAAAATCACGGCCATAA  Raphanus raphanistrum subsp. landra
EV535842       <-- CGTTGCAGAAACGGCCTGCGGGTTTGTGGCCAGCAAAATCACGGCCATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567491       <-- CGTTGCAGAAACGGCCGGTGGGTTTGTGGCCAGCAAAATCACGGCCATAA  Raphanus raphanistrum subsp. landra
EX888973       <-- CGTTGCAGAAGCGGCCTGTGGGTTTGTGGCCAGCAAAATCACGGCCATAA  Raphanus sativus var. oleiformis
FD989031       <-- CGTTGCAGAAACGGCCGGTGGGTTTGAGGCCAGCAAAATCACGGCCATAA  Raphanus raphanistrum subsp. landra
EV535558       <-- CGTTGCAGAAACGGCCGGTGGGTTTGTGGCCAGCAAAATCACGGCCATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899945       <-- CGTTGCAGAAACGGCCGGTGGGTTTGTGGCCAGCAAAATCACGGCCATAA  Raphanus raphanistrum subsp. maritimus
EY930809       <-- CGTTGCAGAAGCGGCCTGTGGGTTTGTGGCCAGCAAAATCACGGCCATAA  Raphanus sativus var. oleiformis
FD562201       <-- CGTTGCAGAAGCGGCCTGCGGGTTTGTGGCCAGCAAAATCACGGCCATAA  Raphanus sativus var. oleiformis
EW726723       <-- CGTTGCAGAAACGGCCGGTGGGTTTGTGGCCAGCAAAATCACGGCCATAA  Raphanus sativus cv Early Scarlet Globe
FD949400       <-- CGTTGCAGAAACGGCCGGTGGGTTTGTGGCCAGCAAAATCACGGCCATAA  Raphanus sativus cv Early Scarlet Globe
EX904120       <-- CGTTGCAGAAGCGGCCTGTGGGTTTGTGGCCAGCAAAATCACGGCCATAA  Raphanus sativus cv Rat-Tail Radish #3870
EY916326       <-- CGTTGCAGAAGCGGCCTGTGGGTTTGTGGCCAGCAAAATCACGGCCATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556277       <-- CGTTGCAGAAACGGCCGGTGGGTTTGTGGCCAGCAAAATCACGGCCATAA  Raphanus raphanistrum subsp. landra
EW732949       <-- CGTTGCAGAAACGGCCGGTGGGTTTGTGGCCAGCAAAATCACGGCCATAA  Raphanus sativus cv Rat-Tail Radish #3870
EY895609       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY912022       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774111       --> ..................................................  Raphanus raphanistrum subsp. landra
FD960390       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV574399       --> ..................................................  Raphanus raphanistrum subsp. landra
EV542279       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945053       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV540419       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547431       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572422       --> ..................................................  Raphanus raphanistrum subsp. landra
EX898735       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX908067       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD537370       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566162       --> ..................................................  Raphanus sativus var. oleiformis
EV531020       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW729346       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV540207       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552614       --> ..................................................  Raphanus raphanistrum subsp. landra
EV541531       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984866       --> ..................................................  Raphanus raphanistrum subsp. landra

               1051   -   1101
UN23045        --> GGAGGGTAGTCGGCTCTGAAAAGGGTAGGAAGGTAGTTGTTGTTTCCGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914160       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964359       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX894408       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV537258       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552531       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX904552       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX769887       <-- GGAGGGTAGTCGGCTCTGAAAAGGGTAGGAAGGTAGTTGTTGTTTCCGAC  Raphanus raphanistrum subsp. landra
EW714169       <-- GGAGGGTAGTCGGCTCTGAAAAGGGTAGGAAGATAGTTGTTGTTTCCGAC  Raphanus sativus var. oleiformis
EV526573       <-- GGAGGGTAGTCGGCTCTGAAAAGGGTAGGAAGGTAGTTGTTGTTTCCGAC  Raphanus raphanistrum subsp. maritimus
FD540978       <-- GGAGGGTAGTCGGTTCTGAAAAGGGTAGGAAGGTAGTTGTTGTTTCCGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538213       <-- GGAGGGTAGTCGGCTCTGAAAAGGGTAGGAAGATAGTTATTGTTTCCGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979685       <-- GGAGGGTAGTCGGCTCTGAAAAGGGTAGGAAGGTAGTTGTTGTTTCCGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569993       <-- GGAGGGTAGTCGGCTCTGAAAAGGGTAGGAAGGTAGTTGTTGTTTCCGAC  Raphanus raphanistrum subsp. landra
EV535842       <-- GGAGGGTAGTCGGCTCTGAAAAGGGTAGGAAGGTAGTTGTTGTTTCCGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567491       <-- GGAGGGTAGTCGGCTCTGAAAAGGGTAGGAAGGTAGTTGTTGTTTCCGAC  Raphanus raphanistrum subsp. landra
EX888973       <-- GGAGGGTAGTCGGCTCTGAAAAGGGTAGGAAGATAGTTGTTGTTTCCGAC  Raphanus sativus var. oleiformis
FD989031       <-- GGAGGGTAGTCGGCTCTGAAAAGGGTAGGAAGGTAGTTGTTGTTTCCGAC  Raphanus raphanistrum subsp. landra
EV535558       <-- GGAGGGTAGTCGGCTCTGAAAAGGGTAGGAAGATAGTTATTGTTTCCGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899945       <-- GGAGGGTAGTCGGCTCTGAAAAGGGTAGGAAGGTAGTTGTTGTTTCCGAC  Raphanus raphanistrum subsp. maritimus
EY930809       <-- GGAGGGTAGTCGGCTCTGAAAAGGGTAGGAAGATAGTTGTTGTTTCCGAC  Raphanus sativus var. oleiformis
FD562201       <-- GGAGGGTAGTCGGCTCTGAAAAGGGTAGGAAGATAGTTGTTGTTTCCGAC  Raphanus sativus var. oleiformis
EW726723       <-- GGAGGGTAGTCGGCTCTGAAAAGGGTAGGAAGATAGTTGTTGTTTCCGAC  Raphanus sativus cv Early Scarlet Globe
FD949400       <-- GGc...............................................  Raphanus sativus cv Early Scarlet Globe
EX904120       <-- GGAGGGTAGTCGGCTCTGAAAAGGGTAGGAAGATAGTTGTTGTTTCCGAC  Raphanus sativus cv Rat-Tail Radish #3870
EY916326       <-- GGAGGGTAGTCGGCTCTGAAAAGGGTAGGAAGATAGTTGTTGTTTCCGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556277       <-- GGAGGGTAGTCGGCTCTGAAAAGGGTAGGAAGGTAGTTGTTGTTTCCGAC  Raphanus raphanistrum subsp. landra
EW732949       <-- GGAGGGTAGTCGGCTCTGAAAAGGGTAGGAAGGTAGTTGTTGTTTC....  Raphanus sativus cv Rat-Tail Radish #3870
EY895609       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY912022       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774111       --> ..................................................  Raphanus raphanistrum subsp. landra
FD960390       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV574399       --> ..................................................  Raphanus raphanistrum subsp. landra
EV542279       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945053       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV540419       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547431       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572422       --> ..................................................  Raphanus raphanistrum subsp. landra
EX898735       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX908067       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD537370       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566162       --> ..................................................  Raphanus sativus var. oleiformis
EV531020       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW729346       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV540207       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552614       --> ..................................................  Raphanus raphanistrum subsp. landra
EV541531       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984866       --> ..................................................  Raphanus raphanistrum subsp. landra

               1101   -   1151
UN23045        --> ATCGACCACAGAGTCACCAAATGTCATGATTGCAGGAAAAAGAGTCGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914160       <-- ..................................................
FD964359       <-- ..................................................
EX894408       <-- ..................................................
EV537258       <-- ..................................................
EV552531       <-- ..................................................
EX904552       <-- ..................................................
EX769887       <-- ATCGACCACAGAGTCACCAAATGTCATGATTGCAGGAAAAAGAGTCGTTG
EW714169       <-- ATCGACCACAGAGTCACCAAATGTCATGATTGCAGGAAAAAGAGTCGTTG
EV526573       <-- ATCGACCACAGAGTCACCAAATGTCATGATTGCAGGAAAAAGAGTCGCTG
FD540978       <-- ATCGACCACAGAGTCACCAAATGTCATGATTGCAGGAAAAAGAGTCGTTG
EV538213       <-- ATCGACCACAGGGTCACCAAATGTCATGATTGCAGGAAAAAGAGTCGTTG
FD979685       <-- ATCGACCACAGAGTCACCAAATGTCATGATTGCAGGAAAAAGAGTCGTTG
EV569993       <-- ATCGACCACAGAGTCACCAAATGTCATGATTGCAGGAAAAAGAGTCGTTG
EV535842       <-- ATCGACCACAGAGTCACCAAATGTCATGATTGCAGGAAAAAGAGTCGTTG
EV567491       <-- ATCGACCACAGAGTCACCAAATGTCATGATTGCAGGAAAAAGAGTCGTTG
EX888973       <-- ATCGACCACAGAGTCACCAAATGTCATGATTGCAGGAAAAAGAGTCGTTG
FD989031       <-- ATCGACCACAGAGTCACCAAATGCCATGATTGCAGGAAAAAGAGTCGTTG
EV535558       <-- ATCGACCACAGAGTCACCAAATGTCATGATTGCAGGAAAAAGAGTCGTTG
EY899945       <-- ATCGACCACAGAGTCACCAAATGTCATGATTGCAGGAAAAAGAGTCGTTG
EY930809       <-- ATCGACCACAGAGTCACCAAATGTCATGATTGCAGGAAAAAGAGTCGTTG
FD562201       <-- ATCGACCACAGAGTCACCAAATGTCATGATTGCAGGAAAAAGAGTCGTTG
EW726723       <-- ATCGACCACAGAGTCGCCAAATGTCATGATTGCAGGAAAAAGAGTCGTTG
FD949400       <-- ..................................................
EX904120       <-- ATCGACCACAGAGTCACCAAATGTCATGATTGCAGGAAAAAGAGTCGTTG
EY916326       <-- ATCGACCACAGAGTCACCAAATGTCATGATTGCAGGAAAAAGAGTCGTTG
FD556277       <-- ATCGACCACAGAGTCACCAAATGTCATGATTGCAGGAAAAAGAGTCGTTG
EW732949       <-- ..................................................
EY895609       --> ..................................................
EY912022       --> ..................................................
EX774111       --> ..................................................
FD960390       --> ..................................................
EV574399       --> ..................................................
EV542279       --> ..................................................
FD945053       --> ..................................................
EV540419       --> ..................................................
EV547431       --> ..................................................
EV572422       --> ..................................................
EX898735       --> ..................................................
EX908067       --> ..................................................
FD537370       --> ..................................................
FD566162       --> ..................................................
EV531020       --> ..................................................
EW729346       --> ..................................................
EV540207       --> ..................................................
FD552614       --> ..................................................
EV541531       --> ..................................................
FD984866       --> ..................................................

               1151   -   1201
UN23045        --> GAGCATCTTGAGCAAATGAAATCTGAAAAGAGACCAAGAGGAGAAGTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914160       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964359       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX894408       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV537258       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552531       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX904552       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX769887       <-- GAGCATCCTGAGCAAATGAAATCTGAAAAGGGACCAAGAGGAGAAGTAAA  Raphanus raphanistrum subsp. landra
EW714169       <-- GAGCATCTTGAGCAAATGAAATCTGAAAAGAGATCAAGAGAAGAAGTAAA  Raphanus sativus var. oleiformis
EV526573       <-- GAGCATCCTGAGCAAATGAAATCTGAAAAGAGACCAAGAGGAGAAGTAAA  Raphanus raphanistrum subsp. maritimus
FD540978       <-- GAACATCTTGAGCAAATGAAATCTGAAAAGAGACCAAGAGGAGTAGTAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538213       <-- GAGCATCTTGAGCAAATGAAATTTGAAAAGAGACCAAGAGGAGAAGTAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979685       <-- GAGCATCCTGAGCAAATGAAATCTGAAAAGAGACCAAGAGGAGAAGTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569993       <-- GAGCATCCTGAGCAAATGAAATCTGAAAAGAGACCAAGAGGAGAAGTAAA  Raphanus raphanistrum subsp. landra
EV535842       <-- GAGCATCTTGAGCAAATGAAATCTGAAAAGAGACCAAGAGGAGAAGTAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567491       <-- GAGCATCCTGAGCAAATGAAATCTGAAAAGAGACCAAGAGGAGAAGTAAA  Raphanus raphanistrum subsp. landra
EX888973       <-- GAGCATCTTGAGCAAATGAAATCTGAAAAGAGATCAAGAGAAGAAGTAAA  Raphanus sativus var. oleiformis
FD989031       <-- GAGCATCCTGAGCAAATGAAATCTGAAAAGAGACCAAGAGGAGAAGTAAA  Raphanus raphanistrum subsp. landra
EV535558       <-- GAGCATCTTGAGCAAATGAAATTTGAAAAGAGACCAAGAGGAGAAGTAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899945       <-- GAGCATCCTGAGCAAATGAAATCTGAAAAGAGACCAAGAGGAGAAGTAAA  Raphanus raphanistrum subsp. maritimus
EY930809       <-- GAGCATCTTGAGCAAATGAAATCTGAAAAGAGATCAAGAGAAGAAGTAAA  Raphanus sativus var. oleiformis
FD562201       <-- GAGCATCTTGAGCAAATGAAATCTGAAAAG....................  Raphanus sativus var. oleiformis
EW726723       <-- GAGCATCTTGAGCAAATGAAATCTGAAAAGAGACCAAGAGGAGAAGTAAA  Raphanus sativus cv Early Scarlet Globe
FD949400       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX904120       <-- GAGCATCTTGAGCAAATGAAATCTGAAAA.....................  Raphanus sativus cv Rat-Tail Radish #3870
EY916326       <-- GAGCATCTTGAGCAAATGAAATCTGAAAAGAGATCAAGAGAAGAAGTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556277       <-- GAGCATCCTGAGCAAATGAAATCTGAAAAGAGACCAAGAGGAGAAGTAAA  Raphanus raphanistrum subsp. landra
EW732949       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY895609       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY912022       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774111       --> ..................................................  Raphanus raphanistrum subsp. landra
FD960390       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV574399       --> ..................................................  Raphanus raphanistrum subsp. landra
EV542279       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945053       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV540419       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547431       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572422       --> ..................................................  Raphanus raphanistrum subsp. landra
EX898735       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX908067       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD537370       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566162       --> ..................................................  Raphanus sativus var. oleiformis
EV531020       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW729346       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV540207       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552614       --> ..................................................  Raphanus raphanistrum subsp. landra
EV541531       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984866       --> ..................................................  Raphanus raphanistrum subsp. landra

               1201   -   1251
UN23045        --> CACGACTTCATGCGGTGATGATCCATGTTTTTGCTTTGGTATGTGTGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY914160       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964359       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX894408       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV537258       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552531       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX904552       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX769887       <-- CACGACTTCATGCGGTGATGATCCATGTTTTTGCTTTGGTATcc......  Raphanus raphanistrum subsp. landra
EW714169       <-- CACGACTTCATGCGGCG---ATCCATGTTTTTGCTTTGGTATcc......  Raphanus sativus var. oleiformis
EV526573       <-- CACGACTTCATGCGGTGATGATCCATG.......................  Raphanus raphanistrum subsp. maritimus
FD540978       <-- CACGACTTCGTGCGGTGATGATCCATGTTTTCGCTTTGGTATcc......  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538213       <-- CACGACTTCGTGCGGTGATGATCCATGTTTTTGCTTTGGTATGTccc...  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979685       <-- CACGACTTCATGCGGTGATGATCCATGTTTTTGCTTTGGTATGTGTcc..  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569993       <-- CACGACTTCATGCGGTGATGATCCATG.......................  Raphanus raphanistrum subsp. landra
EV535842       <-- CACAACTTCGTGCGGTGATGATCCATGTTTTCGCTTTGGTATcc......  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567491       <-- CACGACTTCATGCGGTGATGATCCATG.......................  Raphanus raphanistrum subsp. landra
EX888973       <-- CACGACTTCATGCGGCG---ATCCATGTTTTTGCTTTGGTATGTcc....  Raphanus sativus var. oleiformis
FD989031       <-- CACGACTTCATGCGGTGATGATCCATG.......................  Raphanus raphanistrum subsp. landra
EV535558       <-- CACGACTTCGTGCGGTGATGATCCATGTTTTTGCTTTGGTATGTc.....  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899945       <-- CACGACTTCATGCGGTGATGATCCATGTTTTTGCTTTGGTATGTGTGAAT  Raphanus raphanistrum subsp. maritimus
EY930809       <-- CACGACTTCATGCGGCG---ATCCATGTTTTTGCTTTGGTATGTGTcc..  Raphanus sativus var. oleiformis
FD562201       <-- ..................................................  Raphanus sativus var. oleiformis
EW726723       <-- CACGACTTCATGCGGTG---ATCCATGTTTTTGCTTTGGTATcc......  Raphanus sativus cv Early Scarlet Globe
FD949400       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX904120       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY916326       <-- CACGACTTCATGCGGCG---ATCCATGTTTTTGCTTTGGTATGTccc...  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556277       <-- CACGACTTCATGCGGTGATGATCCATG.......................  Raphanus raphanistrum subsp. landra
EW732949       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY895609       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY912022       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX774111       --> ..................................................  Raphanus raphanistrum subsp. landra
FD960390       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV574399       --> ..................................................  Raphanus raphanistrum subsp. landra
EV542279       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945053       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV540419       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547431       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572422       --> ..................................................  Raphanus raphanistrum subsp. landra
EX898735       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX908067       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD537370       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566162       --> ..................................................  Raphanus sativus var. oleiformis
EV531020       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW729346       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV540207       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD552614       --> ..................................................  Raphanus raphanistrum subsp. landra
EV541531       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD984866       --> ..................................................  Raphanus raphanistrum subsp. landra

               1251   -   1301
UN23045        --> GGTGTAGTTTGATCC
                   ~~~~~~~~~~~~~~~
EY914160       <-- ...............
FD964359       <-- ...............
EX894408       <-- ...............
EV537258       <-- ...............
EV552531       <-- ...............
EX904552       <-- ...............
EX769887       <-- ...............
EW714169       <-- ...............
EV526573       <-- ...............
FD540978       <-- ...............
EV538213       <-- ...............
FD979685       <-- ...............
EV569993       <-- ...............
EV535842       <-- ...............
EV567491       <-- ...............
EX888973       <-- ...............
FD989031       <-- ...............
EV535558       <-- ...............
EY899945       <-- GGTGTAGTTTGATCC
EY930809       <-- ...............
FD562201       <-- ...............
EW726723       <-- ...............
FD949400       <-- ...............
EX904120       <-- ...............
EY916326       <-- ...............
FD556277       <-- ...............
EW732949       <-- ...............
EY895609       --> ...............
EY912022       --> ...............
EX774111       --> ...............
FD960390       --> ...............
EV574399       --> ...............
EV542279       --> ...............
FD945053       --> ...............
EV540419       --> ...............
EV547431       --> ...............
EV572422       --> ...............
EX898735       --> ...............
EX908067       --> ...............
FD537370       --> ...............
FD566162       --> ...............
EV531020       --> ...............
EW729346       --> ...............
EV540207       --> ...............
FD552614       --> ...............
EV541531       --> ...............
FD984866       --> ...............