1      -     51
UN23060        --> GGAATCACCTTCTCCTTAGTTTCTGAACCTACCCTCATCGGGTCTCCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY896535       <-- ..............................ACCCTCATCGG-TCTCCAAG
EX901394       <-- ..................................TCATCGGGTCTCCATG
EV543910       <-- ........................................GGTCTCCAAG
EX900491       <-- ..................................................
FD976278       <-- ..................................................
EX759916       <-- ..................................................
FD974640       <-- ..................................................
EY928579       <-- ..................................................
FD574555       <-- ..................................................
FD583114       <-- ..................................................
EY945056       <-- ..................................................
EV531966       <-- ..................................................
EV548188       --> GGAATCACCTTCTCCTTAGTTTCTGAACCTACCCTCATCGGGTCTCCAAG
EX749421       --> GGAATCACCTTCTCCTTAGTTTCTGAACCTACCCTCATCGGGTCTCCAAG
EX756015       --> GGAATCACCTTCTCCTTAGTTTCTGAACCTACCCTCATCGGGTCTCCAAG
EX890020       --> GGAATCACCTTCTCCTTAGTTTCTGAACCTACCCTCATCGGGTCTCCAAG
EX896584       --> GGAATCACCTTCTCCTTAGTTTCTGAACCTACCCTCATCGGGTCTCCAAG
EX897672       --> GGAATCACCTTCTCCTTAGTTTCTGAACCTACCCTCATCGGGTCTCCATG
EY932989       --> GGAATCACCTTCTCCTTAGTTTCTGAACCTACCCTCATCGGGTCTCCAAG
EY949568       --> GGAATCACCTTCTCCTTAGTTTCTGAACCTACCCTCATCGGGTCTCCAAG
FD570581       --> GGAATCACCTTCTCCTTAGTTTCTGAACCTACCCTCATCGGGTCTCCAAG
FD579063       --> GGAATCACCTTCTCCTTAGTTTCTGAACCTACCCTCATCGGGTCTCCAAG
FD980393       --> .GAATCACCTTCTCCTTAGTTTCTGAACCTACCCTCATCGGGTCTCCAAG
EY901160       --> .ggATCACCTTCTCCTTAGTTTCTGAACCTACCCTCATCGGGTCTCCAAG
EV527822       --> ....ggACCTTCTCCTTAGCTTCTGAACCTACCCTCATCGGGTCTCCAAG

               51     -    101
UN23060        --> GGGCCAAGAAAGAACTGCTTTCTCGGCTTCGCGGAGTCTCACCATCCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY896535       <-- GGGCCAAGAAAGAACTGCTTTCTCGGCTTCGCGGAGTCTCACCATCCTCT  Raphanus raphanistrum subsp. maritimus
EX901394       <-- GGGCCAAGAAAGAACTGCTTTCTCGGCTTCCCGGAGTCTCACCATCCTCT  Raphanus sativus cv Early Scarlet Globe
EV543910       <-- GGGCCAAGAAAGAACTGCTTTCTCGGCTTCGCGGAGTCTCACCCTCCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900491       <-- .....AAGAAAGAACTGCTTTCTCGGCTTCCCGGAGTCTCACCATCCTCT  Raphanus sativus cv Early Scarlet Globe
FD976278       <-- ......AGAAAGAACTGCTTTCTCGGCTTCGCGGAGTCTCACCCTCCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759916       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974640       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928579       <-- ..................................................  Raphanus sativus var. oleiformis
FD574555       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD583114       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY945056       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV531966       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV548188       --> GGGCCAAGAAAGAACTGCTTTCTCGGCTTCGCGGAGTCTCACCCTCCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX749421       --> GGGCCAAGAAAGAACTGCTTTCTCGGCTTCGCGGAGTCTCGCCATCCTCT  Raphanus raphanistrum subsp. maritimus
EX756015       --> GGGCCAAGAAAGAACTGCTTTCTCGGCTTCCCGGAGTCTCACCATCCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX890020       --> GGGCCAAGAAAGAACTGCTTTCTCGGCTTCCCGGAGTCTCACCATCCTCT  Raphanus sativus var. oleiformis
EX896584       --> GGGCCAAGAAAGAACTGCTTTCTCGGCTTCCCGGAGTCTCACCATCCTCT  Raphanus sativus cv Early Scarlet Globe
EX897672       --> GGGCCAAGAAAGAACTGCTTTCTCGGCTTCCCGGAGTCTCACCATCCTCT  Raphanus sativus cv Early Scarlet Globe
EY932989       --> GGGCCAAGAAAGAACTGCTTTCTCGGCTTCCCGGAGTCTCACCATCCTCT  Raphanus sativus var. oleiformis
EY949568       --> GGGCCAAGAAAGAACTGCTTTCTCGGCTTCGCGGAGTCTCACCATCCTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD570581       --> GGGCCAAGAAAGAACTGCTTTCTCGGCTTCCCGGAGTCTCACCATCCTCT  Raphanus sativus cv Early Scarlet Globe
FD579063       --> GGGCCAAGAAAGAACTGCTTTCTCGGCTTCTCGGAGTCTCACCATCCTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD980393       --> GGGCCAAGAAAGAACTGCTTTCTCGGCTTCGCGGAGTCTCACCCTCCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901160       --> GGGCCAAGAAAGAACTGCTTTCTCGGCTTCGCGGAGTCTCACCATCCTCT  Raphanus raphanistrum subsp. maritimus
EV527822       --> GGGCCAAGAAAGAACTGCTTTCTCGGCTTCGCGGAGTCTCACCATCCTCT  Raphanus raphanistrum subsp. maritimus

               101    -    151
UN23060        --> GTTTTCACGCTTTCTTCATCCACACGCAA-CCTCTTACCC-AAACCTAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY896535       <-- GTTTTCACGCTTTCTTCATCCACACGCAA-CCTCTTACCC-AAACCTAAC  Raphanus raphanistrum subsp. maritimus
EX901394       <-- GTTTTCACGCTTTCTTCATCCACACGCAA-CCTCTTACCC-AAACCTAAC  Raphanus sativus cv Early Scarlet Globe
EV543910       <-- GTTTTCACGCTTTCTTCATCCACACGCAAACCTCTTACCC-AAACCTAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900491       <-- GTTTTCACGCTTTCTTCATCCACACGCAAACCTCTTACCC-AAACCTAAC  Raphanus sativus cv Early Scarlet Globe
FD976278       <-- GTTTTCACGCTTTCTTCATCCACACGCAAACCTCTTACCC-AAACCTAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759916       <-- ......ACGCTTTCTTCATCCACACGCAA-CCTCTTACCC-AAACCTAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974640       <-- ......ACGCTTTCTTCATCCACACGCAAACCTCTTACCCCAAACCTAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928579       <-- ......................CACGCAA-CCTCTTACCC-AAACCTAAC  Raphanus sativus var. oleiformis
FD574555       <-- ......................CACGCAA-CCTCTTACCC-AAACCTAAC  Raphanus sativus cv Early Scarlet Globe
FD583114       <-- ...................................TACCC-AAACCTAAC  Raphanus sativus cv Rat-Tail Radish #3870
EY945056       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV531966       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV548188       --> GTTTTCACGCTTTCTTCATCCACACGCAAACCTCTTACCC-AAACCTAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX749421       --> GTTTTCACGCTTTCTTCATCCACACGCAA-CCTCTTACCC-AAACCTAAC  Raphanus raphanistrum subsp. maritimus
EX756015       --> GTTTTCACGCTTTCTTCATCCACACGCAA-CCTCTTACCC-AAACCTAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX890020       --> GTTTTCACGCTTTCTTCATCCACGCGCAAACCTCTTACCC-AAACCTAAC  Raphanus sativus var. oleiformis
EX896584       --> GTTTTCACGCTTTCTTCATCCACACGCAAACCTCTTACCC-AAACCTAAC  Raphanus sativus cv Early Scarlet Globe
EX897672       --> GTTTTCACGCTTTCTTCATCCACACGCAA-CCTCTTACCC-AAACCTAAC  Raphanus sativus cv Early Scarlet Globe
EY932989       --> GTTTTCACGCTTTCTTCATCCACACGCAA-CCTCTTACCC-AAACCTAAC  Raphanus sativus var. oleiformis
EY949568       --> GTTTTCACGCTTTCTTCATCCACACGCAA-CCTCTTACCC-AAACCTAAC  Raphanus sativus cv Rat-Tail Radish #3870
FD570581       --> GTTTTCACGCTTTCTTCATCCACACGCAA-CCTCTTACCC-AAACCTAAC  Raphanus sativus cv Early Scarlet Globe
FD579063       --> CTTTTCACGCTTTCTTCATCCACACGCAA-CCTCTTACCC-AAACCTAAC  Raphanus sativus cv Rat-Tail Radish #3870
FD980393       --> GTTTTCACGCTTTCTTCATCCACACGCAAACCTCTTACCC-AAACCTAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901160       --> GTTTTCACGCTTTCTTCATCCACACGCAA-CCTCTTACCC-AAACCTAAC  Raphanus raphanistrum subsp. maritimus
EV527822       --> GTTTTCACGCTTTCTTCATCCACACGCAA-CCTCTTACCC-AAACCTAAC  Raphanus raphanistrum subsp. maritimus

               151    -    201
UN23060        --> CCTAAAAAA-TGGATTCCACGGAGCTAAAACGTGTGTTCCAAATGTTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY896535       <-- CCTAAAAAA-TGGATTCCACGGAGCTAAAACGTGTGTTCCAAATGTTCGA  Raphanus raphanistrum subsp. maritimus
EX901394       <-- CCTAAAAAA-TGGATTCCACGGAGCTAAAACGTGTGTTCCAAATGTTCGA  Raphanus sativus cv Early Scarlet Globe
EV543910       <-- CCTAAAAAA-TGGATCCTACGGAGCTAAAACGTGTGTTCCAAATGTTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900491       <-- CCTAAAAAA-TGGATTCCACGGAGCTAAAACGTGTGTTCCAAATGTTCGA  Raphanus sativus cv Early Scarlet Globe
FD976278       <-- CCTAAAAAA-TGGATCCTACGGAGCTAAAACGTGTGTTCCAAATGTTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759916       <-- CCTAAAAAAATGGATTCCACGGAGCTAAAACGTGTGTTCCAAATGTTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974640       <-- CCTAAAAAA-TGGATCCTACGGAGCTAAAACGTGTGTTCCAAATGTTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928579       <-- CCTAAAAAA-TGGATTCCACGGAGCTAAAACGTGTGTTCCAAATGTTCGA  Raphanus sativus var. oleiformis
FD574555       <-- CCTAAAAAA-TGGATTCCACGGAGCTAAAACGTGTGTTCCAAATGTTCGA  Raphanus sativus cv Early Scarlet Globe
FD583114       <-- CCTAAAAA--TGGATTCCACGGAGCTAAAACGTGTGTTCCAAATGTTCGA  Raphanus sativus cv Rat-Tail Radish #3870
EY945056       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV531966       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV548188       --> CCTAAAAAA-TGGATCCTACGGAGCTAAAACGTGTGTTCCAAATGTTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX749421       --> CCTAAAAAA-TGGATTCCACGGAGCTAAAACGTTTGTTCCAAATGTTCGA  Raphanus raphanistrum subsp. maritimus
EX756015       --> CCTAAAAAAATGGATTCCACGGAGCTAAAACGTGTGTTCCAAATGTTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX890020       --> CCTAAAAAA-TGGATTCCACGGAGCTAAAACGTGTGTTCCAAATGTTCGA  Raphanus sativus var. oleiformis
EX896584       --> CCTAAAAAA-TGGATTCCACGGAGCTAAAACGTGTGTTCCAAATGTTCGA  Raphanus sativus cv Early Scarlet Globe
EX897672       --> CCTAAAAAA-TGGATTCCACGGAGCTAAAACGTGTGTTCCAAATGTTCGA  Raphanus sativus cv Early Scarlet Globe
EY932989       --> CCTAAAAAA-TGGATTCCACGGAGCTAAAACGTGTGTTCCAAATGTTCGA  Raphanus sativus var. oleiformis
EY949568       --> CCTAAAAAA-TGGATTCCACGGAGCTAAAACGTGTGTTCCAAATGTTCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD570581       --> CCTAAAAAA-TGGATTCCACGGAGCTAAAACGTGTGTTCCAAATGTTCGA  Raphanus sativus cv Early Scarlet Globe
FD579063       --> CCTAAAAA--TGGATTCCACGGAGCTAAAACGTGTGTTCCAAATGTTCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD980393       --> CCTAAAAAA-TGGATCCTACGGAGCTAAAACGTGTGTTCCAAATGTTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901160       --> CCTAAAAAA-TGGATTCCACGGAGCTAAAACGTGTGTTCCAAATGTTCGA  Raphanus raphanistrum subsp. maritimus
EV527822       --> CCTAAAAAA-TGGATTCCACGGAGCTAAAACGTGTGTTCTAAATGTTCGA  Raphanus raphanistrum subsp. maritimus

               201    -    251
UN23060        --> CAAGGACGGAGACGGTCGGATCACACAGAAGGAGCTAAACGAGTCATTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY896535       <-- CAAGGACGGAGACGGTCGGATCACACAGAAGGAGCTAAACGAGTCATTCA
EX901394       <-- CAAGGACGGAGACGGTCGGATCACACAGAAGGAGCTAAACGAGTCATTCA
EV543910       <-- CAAGGACGGAGACGGTCGGATCACACAGAAGGAGCTAAACGAGTCATTCA
EX900491       <-- CAAGGACGGAGACGGTCGGATCACACAGAAGGAGCTAAACGAGTCATTCA
FD976278       <-- CAAGGACGGAGACGGTCGGATCACACAGAAGGAGCTAAACGCGTCATTCA
EX759916       <-- CAAGGACGGAGACGGTCGGATCACACAGAAGGAGCTAAACGAGTCATTCA
FD974640       <-- CAAGGACGGAGACGGTCGGATCACACAGAAGGAGCTAAACGAGTCATTCA
EY928579       <-- CAAGGACGGAGACGGTCGGATCACACAGAAGGAGCTAAACGAGTCATTCA
FD574555       <-- CAAGGACGGAGACGGTCGGATCACACAGAAGGAGCTAAACGAGTCATTCA
FD583114       <-- CAAGGACGGAGACGGTCGGATCACACAGAAGGAGCTAAACGAGTCATTCA
EY945056       <-- ............CGGTCGGATCACACAGAAGGAGCTAAACGAGTCATTCA
EV531966       <-- ..................................................
EV548188       --> CAAGGACGGAGACGGTCGGATCACACAGAAGGAGCTAAACGAGTCATTCA
EX749421       --> CAAGGACGGAGACGGTCGGATCACACAGAAGGAGCTAAACGAGTCATTCA
EX756015       --> CAAGGACGGAGACGGTCGGATCACACAGAAGGAGCTAAACGAGTCATTCA
EX890020       --> CAAGGACGGAGACGGTCGGATCACACAGAAGGAGCTAAACGAGTCATTCA
EX896584       --> CAAGGACGGAGACGGTCGGATCACACAGAAGGAGCTAAACGAGTCATTCA
EX897672       --> CAAGGACGGAGACGGTCGGATCACACAGAAGGAGCTAAACGAGTCATTCA
EY932989       --> CAAGGACGGAGACGGTCGGATCACACAGAAGGAGCTAAACGAGTCATTCA
EY949568       --> CAAGGACGGAGACGGTCGGATCACACAGAAGGAGCTAAACGAGTCATTCA
FD570581       --> CAAGGACGGAGACGGTCGGATCACACAGAAGGAGCTAAACGAGTCATTCA
FD579063       --> CAAGGACGGAGACGGTCGGATCACACAGAAGGAGCTAAACGAGTCATTCA
FD980393       --> CAAGGACGGAGACGGTCGGATCACACAGAAGGAGCTAAACGCGTCATTCA
EY901160       --> CAAGGACGGAGACGGTCGGATCACACAGAAGGAGCTAAACGAGTCATTCA
EV527822       --> CAAGGACGGAGACGGTCGGATCACACAGAAGGAGCTAAACGAGTCATTCA

               251    -    301
UN23060        --> AAAACCTCGGCATCATAATCCCTGAAAACGAGCTATCGCAGATGATCGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY896535       <-- AAAACCTCGGCATCATAATCCCTGAAAACGAGCTGTCGCAGATGATCGAG  Raphanus raphanistrum subsp. maritimus
EX901394       <-- AAAACCTCGGCATCATAATCCCTGAAAACGAGCTATCGCAGATGATCGAG  Raphanus sativus cv Early Scarlet Globe
EV543910       <-- AGAACCTCGGCATCATAATCCCTGAAAACGAGCTATCGCAGATGATCGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900491       <-- AAAACCTCGGCATCATAATCCCTGAAAACGAGCTGTCGCAGATGATCGAG  Raphanus sativus cv Early Scarlet Globe
FD976278       <-- AGAACCTCGGCATCATAATCCCTGAAAACGAGCTATCGCAGATGATCGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759916       <-- AAAACCTCGGCATCATAATCCCTGAAAACGAGCTATCGCAGATGGTCGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974640       <-- AGAACCTCGGCATCATAATCCCTGAAAACGAGCTATCGCAGATGATCGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928579       <-- AAAACCTCGGCATCATAATCCCTGAAAACGAGCTATCGCAGATGATCGAG  Raphanus sativus var. oleiformis
FD574555       <-- AAAACCTCGGCATCATAATCCCTGAAAACGAGCTATCGCAGATGATCGAG  Raphanus sativus cv Early Scarlet Globe
FD583114       <-- AAAACCTCGGCATCATAATCCCTGAAAACGAGCTGTCGCAGATGATCGAG  Raphanus sativus cv Rat-Tail Radish #3870
EY945056       <-- AAAACCTCGGCATCATAATCCCTGAAAACGAGCTGTCGCAGATGATCGAG  Raphanus sativus cv Rat-Tail Radish #3870
EV531966       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV548188       --> AGAACCTCGGCATCATAATCCCTGAAAACGAGCTATCGCAGATGATCGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX749421       --> AAAACCTCGGCATCATAATCCCTGAAAACGAGCTGTCGCAGATGATCGGG  Raphanus raphanistrum subsp. maritimus
EX756015       --> AAAACCTCGGCATCATAATCCCTGAAAACGAGCTATCGCAGATGGTCGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX890020       --> AAAACCTCGGCATCATAATCCCTGAAAACGAGCTGTCGCAGATGATCGAG  Raphanus sativus var. oleiformis
EX896584       --> AAAACCTCGGCATCATAATCCCTGAAAACGAGCTGTCGCAGATGATCGAG  Raphanus sativus cv Early Scarlet Globe
EX897672       --> AAAACCTCGGCATCATAATCCCTGAAAACGAGCTATCGCAGATGATCGAG  Raphanus sativus cv Early Scarlet Globe
EY932989       --> AAAACCTCGGCATCATAATCCCTGAAAACGAGCTATCGCAGATGATCGAG  Raphanus sativus var. oleiformis
EY949568       --> AAAACCTCGGCATCATAATCCCTGAAAACGAGCTGTCGCAGATGATCGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD570581       --> AAAACCTCGGCATCATAATCCCTGAAAACGAGCTATCGCAGATGATCGAG  Raphanus sativus cv Early Scarlet Globe
FD579063       --> AAAACCTCGGCATCATAATCCCTGAAAACGAGCTGTCGCAGATGATCGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD980393       --> AGAACCTCGGCATCATAATCCCTGAAAACGAGCTATCGCAGATGATCGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901160       --> AAAACCTCGGCATCATAATCCCTGAAAACGAGCTGTCGCAGATGATCGAG  Raphanus raphanistrum subsp. maritimus
EV527822       --> AAAACCTCGGCATCATAATCCCTGAAAACGAGCTGTCGCAGATGATCGAG  Raphanus raphanistrum subsp. maritimus

               301    -    351
UN23060        --> AAGATCGATGTGAACGGTGATGGCTGTGTTGACGCTGAAGAGTTTGGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY896535       <-- AAGATCGATGTGAACGGTGATGGCTGTGTTGACGCTGAAGAGTTTGGAGA  Raphanus raphanistrum subsp. maritimus
EX901394       <-- AAGATCGATGTGAACGGTGATGGCTGTGTTGACGCTGAAGAGTTCGGAGA  Raphanus sativus cv Early Scarlet Globe
EV543910       <-- AAGATTGATGTGAACGGTGATGGCTGTGTTGACGCTGAAGAGTTTGGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900491       <-- AAGATCGATGTGAACGGTGATGGCTGTGTTGACGTTGATGAGTTTGGAGA  Raphanus sativus cv Early Scarlet Globe
FD976278       <-- AAGATTGATGTGAACGGTGATGGCTGTGTTGACGCTGAAGAGTTTGGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759916       <-- AAGATCGATGTGAACGGTGATGGCTGTGTTGACGCTGAAGAGTTTGGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974640       <-- AAGATTGATGTGAACGGTGATGGCTGTGTTGACGCTGAAGAGTTTGGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928579       <-- AAGATCGATGTGAACGGTGATGGCTGTGTTGACGCTGAAGAGTTCGGAGA  Raphanus sativus var. oleiformis
FD574555       <-- AAGATCGATGTGAACGGTGATGGCTGTGTTGACGCTGAAGAGTTCGGAGA  Raphanus sativus cv Early Scarlet Globe
FD583114       <-- AAGATCGATGTGAACGGTGATGGCTGTGTTGACGCTGAAGAGTTTGGAGA  Raphanus sativus cv Rat-Tail Radish #3870
EY945056       <-- AAGATCGATGCGAACGGTGATGGCTGTGTTGACGCTGGAGAGTTTGGAGA  Raphanus sativus cv Rat-Tail Radish #3870
EV531966       <-- AAGATCGATGTGAACGGTGATGGCTGTGTTGACGCTGAAGAGTTTGGAGA  Raphanus raphanistrum subsp. maritimus
EV548188       --> AAGATTGATGTGAACGGTGATGGCTGTGTTGACGCTGAAGAGTTTGGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX749421       --> AAGATCGATGTGAACGGTGATGGCTGTGTTGACGCTGAAGAGTTTGGAGA  Raphanus raphanistrum subsp. maritimus
EX756015       --> AAGATCGATGTGAACGGTGATGGCTGTGTTGACGCTGAAGAGTTTGGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX890020       --> AAGATCGATGTGAACGGTGATGGCTGTGTTGACGTTGATGAGTTTGGAGA  Raphanus sativus var. oleiformis
EX896584       --> AAGATCGATGTGAACGGTGATGGCTGTGTTGACGTTGATGAGTTTGGAGA  Raphanus sativus cv Early Scarlet Globe
EX897672       --> AAGATCGATGTGAACGGTGATGGCTGTGTTGACGCTGAAGAGTTCGGAGA  Raphanus sativus cv Early Scarlet Globe
EY932989       --> AAGATCGATGTGAACGGTGATGGCTGTGTTGACGCTGAAGAGTTCGGAGA  Raphanus sativus var. oleiformis
EY949568       --> AAGATCGATGCGAACGGTGATGGCTGTGTTGACGCTGGAGAGTTTGGAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD570581       --> AAGATCGATGTGAACGGTGATGGCTGTGTTGACGCTGAAGAGTTCGGAGA  Raphanus sativus cv Early Scarlet Globe
FD579063       --> AAGATCGATGTGAACGGTGATGGCTGTGTTGACGCTGAAGAGTTTGGAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD980393       --> AAGATTGATGTGAACGGTGATGGCTGTGTTGACGCTGAAGAGTTTGGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901160       --> AAGATCGATGTGAACGGTGATGGCTGTGTTGACGCTGAAGAGTTTGGAGA  Raphanus raphanistrum subsp. maritimus
EV527822       --> AAGATCGATGTGAACGGTGATGGCTGTGTTGACGCTGAAGAGTTTGGAGA  Raphanus raphanistrum subsp. maritimus

               351    -    401
UN23060        --> GCTTTACAAGTCGATAATGGTCCAAGGCGAGGATGAGGAGGTAGGAGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY896535       <-- GCTTTACAAGTCGATAATGGTCCAAGGCGAGGATGAGGAGGTGGGAGATG  Raphanus raphanistrum subsp. maritimus
EX901394       <-- GCTTTACAAGTCGATAATGGTCCAAGGCGAGGATGAGGAGGTAGGAGATG  Raphanus sativus cv Early Scarlet Globe
EV543910       <-- GCTTTACAAGTCGATGATGGTCCAAGGCGAGGATGAGGAGGTAGGAGACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900491       <-- GCTTTACAAGTCGATAATGGTCCAAGGCGAGGATGAGGAGGTGGGAGATG  Raphanus sativus cv Early Scarlet Globe
FD976278       <-- GCTTTACAAGTCGATAATGGTCCAAGGCGAGGATGAGGAGGTAGGAGACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759916       <-- GCTTTACAAGTCGATAATGGTCCAAGGCGACGATGAGGAGGTAGAAGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974640       <-- GCTTTACAAGTCGATAATGGTCCAAGGCGAGGATGAGGAGGTAGGAGGCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928579       <-- GCTTTACAAGTCGATAATGGTCCAAGGCGAGGATGAGGAGGTAGGAGATG  Raphanus sativus var. oleiformis
FD574555       <-- GCTTTACAAGTCGATAATGGTCCAAGGCGAGGATGAGGAGGTAGGAGATG  Raphanus sativus cv Early Scarlet Globe
FD583114       <-- GCTTTACAAGTCGATAATGGTCCAAGGCGAGGATGAGGAGGTGGGAGATG  Raphanus sativus cv Rat-Tail Radish #3870
EY945056       <-- GCTTTACAAGTCGATAATGGTCCAAGGCGAGGATGAGGAGGTGGGAGATG  Raphanus sativus cv Rat-Tail Radish #3870
EV531966       <-- GCTTTACAAGTCGATAATGGTCCAAGGCGAGGATGGGGAGGTGGGAGATG  Raphanus raphanistrum subsp. maritimus
EV548188       --> GCTTTACAAGTCGATGATGGTCCAAGGCGAGGATGAGGAGGTAGGAGACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX749421       --> GCTTTACAAGTCGATAATGGTCCAAGGCGAGGATGAGGAGGTGGGAGATG  Raphanus raphanistrum subsp. maritimus
EX756015       --> GCTTTACAAGTCGATAATGGTCCAAGGCGACGATGAGGAGGTAGAAGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX890020       --> GCTTTACAAGTCGATAATGGTCCAAGGCGAGGATGAGGAGGTGGGAGATG  Raphanus sativus var. oleiformis
EX896584       --> GCTTTACAAGTCGATAATGGTCCAAGGCGAGGATGAGGAGGTGGGAGATG  Raphanus sativus cv Early Scarlet Globe
EX897672       --> GCTTTACAAGTCGATAATGGTCCAAGGCGAGGATGAGGAGGTAGGAGATG  Raphanus sativus cv Early Scarlet Globe
EY932989       --> GCTTTACAAGTCGATAATGGTCCAAGGCGAGGATGAGGAGGTAGGAGATG  Raphanus sativus var. oleiformis
EY949568       --> GCTTTACAAGTCGATAATGGTCCAAGGCGAGGATGAGGAGGTGGGAGATG  Raphanus sativus cv Rat-Tail Radish #3870
FD570581       --> GCTTTACAAGTCGATAATGGTCCAAGGCGAGGATGAGGAGGTAGGAGATG  Raphanus sativus cv Early Scarlet Globe
FD579063       --> GCTTTACAAGTCGATAATGGTCCAAGGCGAGGATGAGGAGGTGGGAGATG  Raphanus sativus cv Rat-Tail Radish #3870
FD980393       --> GCTTTACAAGTCGATAATGGTCCAAGGCGAGGATGAGGAGGTAGGAGACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901160       --> GCTTTACAAGTCGATAATGGTCCAAGGCGAGGATGAGGAGGTGGGAGATG  Raphanus raphanistrum subsp. maritimus
EV527822       --> GCTTTACAAGTCGATAATGGTCCAAGGCGAGGATGGGGAGGTGGGAGATG  Raphanus raphanistrum subsp. maritimus

               401    -    451
UN23060        --> AAGATATGAAGGAAGCGTTCAACGTTTTTGATCAGAATGGAGATGGGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY896535       <-- AAGATATGAAGGAAGCGTTTAACGTTTTTGATCAGAATGGAGATGGGTTT  Raphanus raphanistrum subsp. maritimus
EX901394       <-- AAGATATGAAGGAAGCGTTCAACGTTTTCGATCAGAATGGAGATGGGTTT  Raphanus sativus cv Early Scarlet Globe
EV543910       <-- AAGATATGAAGGAAGCGTTCAACGTTTTTGACCAGAATGGAGATGGGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900491       <-- AAGATATGAAGGAAGCGTTCAACGTTTTTGATCAGAATGGAGATGGGTTT  Raphanus sativus cv Early Scarlet Globe
FD976278       <-- AAGATATGAAGGAAGCGTTCAACGTTTTTGACCAGAATGGAGATGGGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759916       <-- AAGATATGAAGGAAGCGTTCAACGTTTTTGATCAGAATGGAGATGGGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974640       <-- AAGATATGAAGGAAGCGTTCAACGTTTTTGACCAGAATGGAGATGGGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928579       <-- AAGATATGAAGGAAGCGTTCAACGTTTTCGATCAGAATGGAGATGGGTTT  Raphanus sativus var. oleiformis
FD574555       <-- AAGATATGAAGGAAGCGTTCAACGTTTTCGATCAGAATGGAGATGGGTTT  Raphanus sativus cv Early Scarlet Globe
FD583114       <-- AAGATATGAAGGAAGCGTTCAACGTTTTTGATCAGAATGGAGATGGGTTT  Raphanus sativus cv Rat-Tail Radish #3870
EY945056       <-- AAGATATGAAGGAAGCGTTCAACGTTTTTGATCAGAATGGAGATGGGTTT  Raphanus sativus cv Rat-Tail Radish #3870
EV531966       <-- AAGATATGAAGGAAGCGTTCAACGTTTTTGATCAGAATGGAGATGGGTTT  Raphanus raphanistrum subsp. maritimus
EV548188       --> AAGATATGAAGGAAGCGTTCAACGTTTTTGACCAGAATGGAGATGGGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX749421       --> AAGATATGAAGGAAGCGTTCAACGTTTTTGATCAGAATGGAGATGGGTTT  Raphanus raphanistrum subsp. maritimus
EX756015       --> AAGATATGAAGGAAGCGTTCAACGTTTTTGATCAGAATGGAGATGGGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX890020       --> AAGATATGAAGGAAGCGTTCAACGTTTTTGATCAGAATGGAGATGGGTTT  Raphanus sativus var. oleiformis
EX896584       --> AAGATATGAAGGAAGCGTTCAACGTTTTTGATCAGAATGGAGATGGGTTT  Raphanus sativus cv Early Scarlet Globe
EX897672       --> AAGATATGAAGGAAGCGTTCAACGTTTTCGATCAGAATGGAGATGGGTTT  Raphanus sativus cv Early Scarlet Globe
EY932989       --> AAGATATGAAGGAAGCGTTCAACGTTTTCGATCAGAATGGAGATGGGTTT  Raphanus sativus var. oleiformis
EY949568       --> AAGATATGAAGGAAGCGTTCAACGTTTTTGATCAGAATGGAGATGGGTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD570581       --> AAGATATGAAGGAAGCGTTCAACGTTTTCGATCAGAATGGAGATGGGTTT  Raphanus sativus cv Early Scarlet Globe
FD579063       --> A.................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD980393       --> AAGATATGAAGGAAGCGTTCAACGTTTTTGACCAGAATGGAGATGGGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901160       --> AAGATATGAAGGAAGCGTTTAACGTTTTTGATCAGAATGGAGATGGGTTT  Raphanus raphanistrum subsp. maritimus
EV527822       --> AAGATATGAAGGAAGCGTTCAACGTTTTTGATCAGAATGGAGATGGGTTT  Raphanus raphanistrum subsp. maritimus

               451    -    501
UN23060        --> ATTACGGTGGATGAGTTGAAAACCGTCTTGTCTTCCTTGGGACTCAAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY896535       <-- ATTACGGTGGATGAGTTGAAAACCGTGCTGTCTACCTTGGGACTCAAGCA  Raphanus raphanistrum subsp. maritimus
EX901394       <-- ATTACGGTGGATGAGTTGAAAACCGTCTTGTCTTCCTTGGGACTCAAGCA  Raphanus sativus cv Early Scarlet Globe
EV543910       <-- ATAACGGTGGATGAGTTGAAAACCGTCTTGTCTTCCTTGGGACTCAAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900491       <-- ATTACGGTGGATGAGTTGAAAACCGTGCTGTCTACCTTGGGACTCAAGCA  Raphanus sativus cv Early Scarlet Globe
FD976278       <-- ATAACGGTGGATGAGTTGAAAACCGTCTTGTCTTCCTTGGGACTCAAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759916       <-- ATTACGGTGGATGAGTTGAAAACCGTCTTGTCTTCCTTGGGACTCAAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974640       <-- ATAACGGTGGATGAGTTGAAAACCGTCTTGTCTTCCTTGGGACTCAAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928579       <-- ATTACGGTGGATGAGTTGAAAACCGTCTTGTCTTCCTTGGGACTCAAGCA  Raphanus sativus var. oleiformis
FD574555       <-- ATTACGGTGGATGAGTTGAAAACCGTCTTGTCTTCCTTGGGACTCAAGCA  Raphanus sativus cv Early Scarlet Globe
FD583114       <-- ATTACGGTGGATGAGTTGAAAACCGTGCTGTCTACCTTGGGACTCAAGCA  Raphanus sativus cv Rat-Tail Radish #3870
EY945056       <-- ATTACGGTGGATGAGTTGAAAACCGTGCTGTCTACCTTGGGACTCAAGCA  Raphanus sativus cv Rat-Tail Radish #3870
EV531966       <-- ATTACGGTGGATGAGTTGAAAACCGTGCTGTTTACCTTGGGACTCAAGCA  Raphanus raphanistrum subsp. maritimus
EV548188       --> ATAACGGTGGATGAGTTGAAAACCGTCTTGTCTTCCTTGGGACTCAAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX749421       --> ATTACGGTGGATGAGTTGAAAACCGTGCTGTCTACCTTGGGACTCAAGCA  Raphanus raphanistrum subsp. maritimus
EX756015       --> ATTACGGTGGATGAGTTGAAAACCGTCTTGTCTTCCTTGGGACTCAAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX890020       --> ATTACGGTGGATGAGTTGAAAACCGTGCTGTCTACCTTGGGACTCAAGCA  Raphanus sativus var. oleiformis
EX896584       --> ATTACGGTGGATGAGTTGAAAACCGTGCTGTCTACCTTGGGACTCAAGCA  Raphanus sativus cv Early Scarlet Globe
EX897672       --> ATTACGGTGGATGAGTTGAAAACCGTCTTGTCTTCCTTGGGACTCAAGCA  Raphanus sativus cv Early Scarlet Globe
EY932989       --> ATTACGGTGGATGAGTTGAAAACCGTCTTGTCTTCCTTGGGACTCAAGCA  Raphanus sativus var. oleiformis
EY949568       --> ATTACGGTGGATGAGTTGAAAACCGTGCTGTCTACCTTGGGACTCAAGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD570581       --> ATTACGGTGGATGAGTTGAAAACCGTCTTGTCTTCCTTGGGACTCAAGCA  Raphanus sativus cv Early Scarlet Globe
FD579063       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD980393       --> ATAACGGTGGATGAGTTGAAAACCGTCTTGTCTTCCTTGGGACTCAAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901160       --> ATTACGGTGGATGAGTTGAAAACCGTGCTGTCTACCTTGGGACTCAAGCA  Raphanus raphanistrum subsp. maritimus
EV527822       --> ATTACGGTGGATGAGTTGAAAACCGTGCTGTCTACCTTGGGACTCAAGCA  Raphanus raphanistrum subsp. maritimus

               501    -    551
UN23060        --> AGGTAAGACCTTGGAGGAATGTAGGAAGATGATAATACAAGTGGATGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY896535       <-- AGGTAGGACCTTGGAGGAATGTAGGAAGATGATAATACAAGTGGATGTTG
EX901394       <-- AGGTAAGACCTTGGAGGAATGTAGGAAGATGATAATACAAGTGGATGTTG
EV543910       <-- AGGTAAGACCTTGGAGGAATGTAGGAAGATGATAATACAAGTGGATGTTG
EX900491       <-- AGGTAAGACCTTGGAGGAATGTAGGAAGATGATAATACAAGTGGATGTTG
FD976278       <-- AGGTAAGACCTTGGAGGAATGTAGGAAGATGATAATACAAGTGGATGTTG
EX759916       <-- AGGTAAGACCTTGGAGGAATGTAGGAAGATGATAATACAAGTGGATGTTG
FD974640       <-- AGGTAAGACCTTGGAGGAATGTAGGAAGATGATAATACAAGTGGATGTTG
EY928579       <-- AGGTAAGACCTTGGAGGAATGTAGGAAGATGATAATACAAGTGGATGTTG
FD574555       <-- AGGTAAGACCTTGGAGGAATGTAGGAAGATGATAATACAAGTGGATGTTG
FD583114       <-- AGGTAAGACCTTGGAGGAATGTAGGAAGATGATAATACAAGTGGATGTTG
EY945056       <-- AGGTAAGACCTTGGAGGAATGTAGGAAGATGATAATACAAGTGGATGTTG
EV531966       <-- AGGTAAGACCTTGGAGGAATGTAGGAAGATGATAATACAAGTGGATGTTG
EV548188       --> AGGTAAGACCTTGGAGGAATGTAGGAAGATGATAATACAAGTGGATGTTG
EX749421       --> AGGTAAGACCTTGGAGGAATGTAGGAAGATGATAATACAAGCGGATGTTG
EX756015       --> AGGTAAGACCTTGGAGGAATGTAGGAAGATGATAATACAAGTGGATGTTG
EX890020       --> AGGTAAGACCTTGGAGGAATGTAGGAAGATGATAATACAAGTGGATGTTG
EX896584       --> AGGTAAGACCTTGGAGGAATGTAGGAAGATGATAATACAAGTGGATGTTG
EX897672       --> AGGTAAGACCTTGGAGGAATGTAGGAAGATGATAATACAAGTGGATGTTG
EY932989       --> AGGTAAGACCTTGGAGGAATGTAGGAAGATGATAATACAAGTGGATGTTG
EY949568       --> AGGTAAGACCTTGGAGGAATGTAGGAAGATGATAATACAAGTGGATGTTG
FD570581       --> AGGTAAGACCTTGGAGGAATGTAGGAAGATGATAATACAAGTGGATGTTG
FD579063       --> ..................................................
FD980393       --> AGGTAAGACCTTGGAGGAATGTAGGAAGATGATAATACAAGTGGATGTTG
EY901160       --> AGGTAGGACCTTGGAGGAATGTAGGAAGATGATAATACAAGTGGATGTTG
EV527822       --> AGGTAAGACCTTGGAGGAATGTAGGAAGATGATAATACAAGTGGATGTTG

               551    -    601
UN23060        --> ATGGTGATGGTAGGGTTAATTACAAGGAGTTTAGACAAATGATGAAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY896535       <-- ATGGTGATGGTAGGGTTAATTACAAGGAGTTTAGACAAATGATGAAGAAG
EX901394       <-- ATGGTGATGGTAGGGTTAATTACAAGGAGTTTAGACAAATGATGAAGAAG
EV543910       <-- ATGGTGATGGTAGGGTTAATTACAAGGAGTTTAGACAAATGATGAAGAAG
EX900491       <-- ATGGTGATGGTAGGGTTAATTACAAGGAGTTTAGACAAATGATGAAGAAG
FD976278       <-- ATGGTGATGGTAGGGTTAATTACAAGGAGTTTAGACAAATGATGAAGAAG
EX759916       <-- ATGGTGATGGTAGGGTTAATTACAAGGAGTTTAGACAAATGATGAAGAAG
FD974640       <-- ATGGTGATGGTAGGGTTAATTACAAGGAGTTTAGACAAATGATGAAGAAG
EY928579       <-- ATGGTGATGGTAGGGTTAATTACAAGGAGTTTAGACAAATGATGAAGAAG
FD574555       <-- ATGGTGATGGTAGGGTTAATTACAAGGAGTTTAGACAAATGATGAAGAAG
FD583114       <-- ATGGTGATGGTAGGGTTAATTACAAGGAGTTTAGACAAATGATGAAGAAG
EY945056       <-- ATGGTGATGGTAGGGTTAATTACAAGGAGTTTAGACAAATGATGAAGAAG
EV531966       <-- ATGGGGATGGTAGGGTTAATTACAAGGAGTTTAGACAAATGATGAAGAAG
EV548188       --> ATGGTGATGGTAGGGTTAATTACAAGGAGTTTAGACAAATGATGAAGAAG
EX749421       --> ATGGTGATGGTAGGGTTAATTACAAGGAGTTTAGACAAATGATGAAGAAG
EX756015       --> ATGGTGATGGTAGGGTTAATTACAAGGAGTTTAGACAAATGATGAAGAAG
EX890020       --> ATGGTGATGGTAGGGTTAATTACAAGGAGTTTAGACAAATGATGAAGAAG
EX896584       --> ATGGTGATGGTAGGGTTAATTACAAGGAGTTTAGACAAATGATGAAGAAG
EX897672       --> ATGGTGATGGTAGGGTTAATTACAAGGAGTTTAGACAAATGATGAAGAAG
EY932989       --> ATGGTGATGGTAGGGTTAATTACAAGGAGTTTAGACAAATGATGAAGAAG
EY949568       --> ATGGTGATGGTAGGGTTAATTACAAGGAGTTTAGACAAATGATGAAGAAG
FD570581       --> ATGGTGATGGTAGGGTTAATTACAAG-AGTTTAGACAAATGATGAAGAAG
FD579063       --> ..................................................
FD980393       --> ATGGTGATGGTAGGGTTAATTACAAGGAGTTTAGACAAATGATGAAGAAG
EY901160       --> ATGGTGATGGTAGGGTTAATTACAAGGAGTTTAGACAAATGATGAAGAAG
EV527822       --> ATGGTGATGGTAGGGTTAATTACAAGGAGTTTAGACAAATGATGAAGAAG

               601    -    651
UN23060        --> GGTCAGCTTTTAGCTCAATGAGCTGATGGTTTATATATTTGTTTT-TTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY896535       <-- GGTCAGCTTTTAGCTCAATGAGCTGATGGTTTATATATTTGTTTTCTTTT  Raphanus raphanistrum subsp. maritimus
EX901394       <-- GGTCAGCTTTTAGCTCAATGAGCTGATGGTTTATATATTTGTCTT-TT--  Raphanus sativus cv Early Scarlet Globe
EV543910       <-- GGTCAGCTTTTAGCTCAATGAGCTGATGGTTTATATATTTGTTTT-TTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900491       <-- GGTCAGCTTTTAGCTCAATGAGCTGATGGTTTATATATTTGTTTTCTTTT  Raphanus sativus cv Early Scarlet Globe
FD976278       <-- GGTCAGCTTTTAGCTCAATGAGCTGATGGTTTATATATTTGTTTT-TTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759916       <-- GGTCAGCTTTTAGCTCAATGAGCTGATGGTTTATATATTTGTTTT-TTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974640       <-- GGTCAGCTTTTAGCTCAATGAGCTGATGGTTTATATATTTGTTTT-TTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928579       <-- GGTCAGCTTCTAGCTCAATGAGCTGATGGTTTATATATTTGTCTT-TT--  Raphanus sativus var. oleiformis
FD574555       <-- GGTCAGCTTTTAGCTCAATGAGCTGATGGTTTATATATTTGTCTT-TT--  Raphanus sativus cv Early Scarlet Globe
FD583114       <-- GGTCAGCTTTTAGCTCAATGAGCTGATGGTTTATATATTTGTTTTCTTTT  Raphanus sativus cv Rat-Tail Radish #3870
EY945056       <-- GGTCAGCTTTTAGCTCAATGAGCTGATGGTTTATATATTTGTTTTCTTTT  Raphanus sativus cv Rat-Tail Radish #3870
EV531966       <-- GGTCAGCTTTTAGCTCAATGAGCTGATGGTTTATATATTTGTTTTCTTTT  Raphanus raphanistrum subsp. maritimus
EV548188       --> GGTCAGCTTTTAGCTCAATGAGCTGATGGTTTATATATTTGTTTT-TTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX749421       --> GGTCAGCTTTTAGCTCAATGAGCTGATGGTTTATATATTTGTTTTCTTTT  Raphanus raphanistrum subsp. maritimus
EX756015       --> GGTCAGCTTTTAGCTCAATGAGCTGATGGTTTATATATTTGTTTT-TTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX890020       --> GGTCAGCTTTTAGCTCAATGAGCTGATGGTTTATATATTTGTTTTCTTTT  Raphanus sativus var. oleiformis
EX896584       --> GGTCAGCTTTTAGCTCAATGAGCTGATGGTTTATATATTTGTTTTCTTTT  Raphanus sativus cv Early Scarlet Globe
EX897672       --> GGTCAGCTTTTAGCTCA-TGAGCTGATGGTTTATATATTTGTCTT-TTT-  Raphanus sativus cv Early Scarlet Globe
EY932989       --> GGTCAGCTTCTAGCTCAATGAGCTGATGGTTTATATATTTGTCTT-TTT-  Raphanus sativus var. oleiformis
EY949568       --> GGTCAGCTTTTAGCTCAATGAGCTGATGGTTTATATATTTGTTTTCTTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD570581       --> GGTCAGCTTTTAGCTCAATGAGCTGATGGTTTATATATTTGTCTT-TTT-  Raphanus sativus cv Early Scarlet Globe
FD579063       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD980393       --> GGTCAGCTTTTAGCTCAATGAGCTGATGGTTTATATATTTGTTTT-TTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901160       --> GGTCAGCTTTTAGCTCAATGAGCTGATGGTTTATATATTTGTTTTCTTTT  Raphanus raphanistrum subsp. maritimus
EV527822       --> GGTCAGCTTTTAGCTCAATGAGCTGATGGTTTATATATTTGTTTTCTTTT  Raphanus raphanistrum subsp. maritimus

               651    -    701
UN23060        --> T-GTGTTTACCATTTTTCTCTCGCATTCTAGAAGGAAATATCAGATGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY896535       <-- T-GTGTTTACCATTTTTCTCTCGCATTCTGGAAGGAAACATCAGATGATC  Raphanus raphanistrum subsp. maritimus
EX901394       <-- T-GTGTTTACCATTTTTCTCTCGCATTCTAGAAGGAAATATCAGATGATC  Raphanus sativus cv Early Scarlet Globe
EV543910       <-- TTGTGTTTACCATTTTTCTCTCGCATTCTAGAAGGAAATATCAGATGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900491       <-- T-GTGTTTACCATTTTTCTCTCGCATTCTAGAAGGAAATATCAGATGATC  Raphanus sativus cv Early Scarlet Globe
FD976278       <-- T-GTGTTTACCATTTTTCTCTCGCATTCTAGAAGGAAATATCAGATGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759916       <-- T-GTGTTTACCATTTTTCTCTCGCATTTT--AAGGAAATATCAGATGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974640       <-- TTGTGTTTACCATTTTTCTCTCGCATTCTAGAAGGAAATATCAGATGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928579       <-- T-GTGTTTACCATTTTTCTCTCGCATTCTAGAAGGAAATATCAGATGATC  Raphanus sativus var. oleiformis
FD574555       <-- T-GTGTTTACCATTTTTCTCTCGCATTCTAGAAGGAAATATCAGATGATC  Raphanus sativus cv Early Scarlet Globe
FD583114       <-- T-GTGTTTACCATTTTTCTCTCGCATTCTAGAAGGAAATATCAGATGATC  Raphanus sativus cv Rat-Tail Radish #3870
EY945056       <-- T-GTGTTTACCATTTTTCTCTCGCATTCTGGAAGGAAATATCAGATGATC  Raphanus sativus cv Rat-Tail Radish #3870
EV531966       <-- T-GTGTTTACCCTTTTTCTCTCGC..........................  Raphanus raphanistrum subsp. maritimus
EV548188       --> TTGTGTTTACCAT.....................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX749421       --> T-GTGTTTACCATTTTTCTCTCGCATTCTGGAAG-AAATATCAGAT---C  Raphanus raphanistrum subsp. maritimus
EX756015       --> T-GTGTTTACCATTTTTCTCTCGCATTCTA--A-GAAATATCAGATGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX890020       --> T-GTGTTTACCATTTTTCTCTCGCATTCT.....................  Raphanus sativus var. oleiformis
EX896584       --> T-GTGTTTACCATTTTTCTCTCGCATTCTAGAAG-AAATATCAGATGATC  Raphanus sativus cv Early Scarlet Globe
EX897672       --> --GTGTTTACCATTTT-CTCTCGCATTCTAGAAG--AATATCAGATGATC  Raphanus sativus cv Early Scarlet Globe
EY932989       --> --GTGTTTACCATTTTTCTCTCGCATTCTAGAAG-AAATATCAGATGATC  Raphanus sativus var. oleiformis
EY949568       --> T-GTGTTTACCATTTTTCTCTCGCATTC......................  Raphanus sativus cv Rat-Tail Radish #3870
FD570581       --> --GTGTTTACCATTTTTCTCTCGCATTCTAGAAG-AAATATCAGATGATC  Raphanus sativus cv Early Scarlet Globe
FD579063       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD980393       --> T-GTGTTTACCATTTTTCTCTCGCATTCTAGAAG-AAATATCAGATGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY901160       --> T-GTGTTTACCATTTTTCTCTCGCATTCTGGAAG-AAACATCAGATGATC  Raphanus raphanistrum subsp. maritimus
EV527822       --> T-GTGTTTACCATTTTTCTCTCGCA--GTGGAAAGAAATATCAGATGATC  Raphanus raphanistrum subsp. maritimus

               701    -    751
UN23060        --> TGTAACTGAACTGTCTTATATAGTGTCTAGGTTTGCGAGAGCACATTGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY896535       <-- TGTAACTGAACTGTCTTATATAGTGTCTAGGTTTGCGAGAGCACATTGTA
EX901394       <-- TGTAACTGAACTGTCTTATATAGTGTCTAGGTTTGCGAGAGCACATTGTA
EV543910       <-- TGTAACTGAACTGTCTTATATAGTGTCTAGGTTTGCGAGAGCACATTGTA
EX900491       <-- TGTAACTGAACTGTCTTATATAGTGTCTAGGTTTGTGAGAGCACATTGTA
FD976278       <-- TGTAACTGAACTGTCTTATATAGTGTCTAGGTTTGCGAGAGCACATTGTA
EX759916       <-- TGTAACTGAACTGTCTTATATAGTGTCTAGGTTTGCGAGAGCCCATTGTA
FD974640       <-- TGTAACTGAACTGTCTTATATAGTGTCTAGGTTTGCGAGAGCACATTGTA
EY928579       <-- TGTAACTGAACTGTCTTATATAGTGTCTAGGTTTGCGAGAGCACATTGTA
FD574555       <-- TGTAACTGAACTGTCTTATATAGTGTCTAGGTTTGCGAGAGCACATTGTA
FD583114       <-- TGTAACTGAACTGTCTTATATAGTGTCTAGGTTTGCGAGAGCACATTGTA
EY945056       <-- TGTAACTGAACTGTCTTATATAGTGTCTAGGTTTGCGAGAGCACATTGTA
EV531966       <-- ..................................................
EV548188       --> ..................................................
EX749421       --> TGTAACTGAACTGTCTTATATAGTGT........................
EX756015       --> TGTAACTGAACTGTCTTATATAGTGT........................
EX890020       --> ..................................................
EX896584       --> TGTAACTGAACTGTCTTATATAGTGTC.......................
EX897672       --> TGTAACTGAACTGTCTTATATAGTG.........................
EY932989       --> TGTAACTGAACTGTCTTATATAGTGTCTAGGTT-GCGAGAGCACATTGTA
EY949568       --> ..................................................
FD570581       --> TGTAACTGA-CTGTCT-ATATAGTGTCTAG-TTTGCGAGAGCACATTGTA
FD579063       --> ..................................................
FD980393       --> TGTAACTGAACTGTCTTATATAGTGT........................
EY901160       --> TGTAACTGAACTGTCTTATATAGTGTC.......................
EV527822       --> TGTAACTGAACTGTCTTATATAGTGTC.......................

               751    -    801
UN23060        --> AAAAACTTAGACCTGTTCGTTTCTGATGTGATTTGTGATGATTTTT-TTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY896535       <-- AAAAACT-AGACATGTTCGTTTCTGATGTGATTCGTGAAGATTTTT-TTT
EX901394       <-- AAAAATTTAGACCTGTTCGTTTCTAATGTGATTTGTGATGATTTTTcct.
EV543910       <-- AAAAACTTAGACCTGTTCGTTTCTGATGTGATTTGTGATGATTTTT-TTT
EX900491       <-- AAAAACT-AGACATGTTCGTTTCTGATGTGATTCGTGAAGATTTTT-TTT
FD976278       <-- AAAAACTTAGACCTGTTCGTTTCTGATGTGATTTGTGATGATTTTT-TTT
EX759916       <-- AAAAACTTAGACCTGTTCGTTTCTGATGTGATTTGTGATGATTTTT-TTT
FD974640       <-- AAAAACTTAGACCTGTTCGTTTCTGATGTGATTTGTGATGATTTTT-TTT
EY928579       <-- AAAAATTTAGACCTGTTCGTTTCTAATGTGATTTGTGATGATTTTTcttt
FD574555       <-- AAAAATTTAGACCTGTTCGTTTCTAATGTGATTTGTGATGATTTTTCTTT
FD583114       <-- AAAA-C-TAGACATGTTCGTTTCTGATGTGATTCGTGAAGATTTTT-TTT
EY945056       <-- AAAA-C-TAGACATGTTCGTTTCTGATGTGATTCGTGAAGATTTTT-TTT
EV531966       <-- ..................................................
EV548188       --> ..................................................
EX749421       --> ..................................................
EX756015       --> ..................................................
EX890020       --> ..................................................
EX896584       --> ..................................................
EX897672       --> ..................................................
EY932989       --> AAA...............................................
EY949568       --> ..................................................
FD570581       --> AAAA--TTAGA-CTGTTCGTTTCT-ATGTGATTTGTGATGAT........
FD579063       --> ..................................................
FD980393       --> ..................................................
EY901160       --> ..................................................
EV527822       --> ..................................................

               801    -    851
UN23060        --> -ATAAGCAAAGTTCGTTTATACTGATTAAACATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY896535       <-- -ATAAGCAAACTTCGTTTATACTG..........
EX901394       <-- ..................................
EV543910       <-- -ATAAGCAAAGTTCGTTTATACTGATT.......
EX900491       <-- -ATAAGCAAACTTCGTTTATACcg..........
FD976278       <-- TATAAGCAAAGTTCGTTTATACTGATTAAACATG
EX759916       <-- -ATA..............................
FD974640       <-- TATAAGCAAAGTTCGTTTATAC............
EY928579       <-- ..................................
FD574555       <-- -ATAAGCAAAGTTTGTTTATACcg..........
FD583114       <-- -ATAAGC...........................
EY945056       <-- -ATAAGCAAACTTCGTTTATACcg..........
EV531966       <-- ..................................
EV548188       --> ..................................
EX749421       --> ..................................
EX756015       --> ..................................
EX890020       --> ..................................
EX896584       --> ..................................
EX897672       --> ..................................
EY932989       --> ..................................
EY949568       --> ..................................
FD570581       --> ..................................
FD579063       --> ..................................
FD980393       --> ..................................
EY901160       --> ..................................
EV527822       --> ..................................