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Alignment for radish unigene UN23071

               1      -     51
UN23071        --> GGAGTGTTAAAAAGGCAAACCCTTTTCTTCATCAT---AAACC-TTT-AA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570514       <-- ..................................................
EV570515       <-- ..................................................
EV573831       <-- ..................................................
EW718909       <-- ..................................................
EY942343       <-- ..................................................
EV571777       <-- ..................................................
EV546258       <-- ..................................................
FD583215       <-- ..................................................
EV537845       --> GGAGTGTTAAAAAGGCAAACCCTTTTCTTCATCAT---AAACC-TCT-AA
EV551092       --> GGAGTGTTAAAAAGGCAAACCCTTTTCTTCATCAT---AAACC-TCT-AA
EV565198       --> GGAGTGTTAAAAAGGCAAACCCTTTTCTTCTTCATCAAAAACCTTTT-AA
EW714773       --> GGAGTGTTAAAAAGGCAAACCCTTTTCTTCATCAT---AAACC-TTT-AA
EY901075       --> GGAGTGTTAAAAAGGCAAACCCTTTTCTTCATCAT---AAACC-TTTCAA
FD579195       --> GGAGTGTTAAAAAGGCAAACCCTTTTCTTCATCAT---AAACC-TTTCAA
FY429217       --> ..............................ATCAT---AAACC-TTT-CA
EW714224       --> .....................................gggACC-TTT-AA
EV569244       --> ..................................................
FY440665       --> ..................................................
EV566708       --> ..................................................

               51     -    101
UN23071        --> CTCCATTTGTTCCCTCTTCCTCCGCCGTTTCATCC-CTCTCCCAAGTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570514       <-- ..................................................
EV570515       <-- ..................................................
EV573831       <-- ..................................................
EW718909       <-- ..................................................
EY942343       <-- ..................................................
EV571777       <-- ..................................................
EV546258       <-- ..................................................
FD583215       <-- ..................................................
EV537845       --> C-CCATTTGTTCCCTCTTC-TCCGCCGTTTCATCC-CTCCCCCAAGTTTA
EV551092       --> CTCCATTTGTTCCCTCTTC-TCCGCCGTTTCATCC-CTCCCCCAAGTTTA
EV565198       --> CTCCATTTGTTCTCTCTTC-TCCGCCGATTCATCCAATCTCCCAAGTTTA
EW714773       --> CTCCATTTGTTCCCTCTTCCTCCGCCGTTTCATCC-CTCTCCCAAGTTTA
EY901075       --> CTCCATTTGTTCCCTCTTCCTCCGCCGTTTCATCC-CTCTCCCAAGTTTA
FD579195       --> CTCCATTTGTTCCCTCTTCCTCCGCCGTTTCATCC-CTCTCCCAAGTTTA
FY429217       --> CTCCATTTGTCCCCTCTTCCTCCGCCGTTTCATCC-CTCTCCCAAGTTTA
EW714224       --> CTCCATTTGTTCCCTCTTCCTCCGCCGTTTCATCC-CTCTCCCAAGTTTA
EV569244       --> .................................gcatcctctgctGTTTA
FY440665       --> .............................................GTTTA
EV566708       --> ..................................................

               101    -    151
UN23071        --> CCTTAGCAAAGTTTCTACCTTTATCCGCTC----CATGGCCACCCGTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570514       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV570515       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV573831       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW718909       <-- ..................................................  Raphanus sativus var. oleiformis
EY942343       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV571777       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV546258       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD583215       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV537845       --> CGTTAGCAAAGTTTCTACCTTTATCCACTC----CATGGCCACCCGTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551092       --> CGTTAGCAAAGTTTCTACCTTTATCCACTC----CATGGCCACCCGTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565198       --> CCTTAGCAAAGTTTCTACCTTTATCCGCTC----CATGGCCACCCGTCTT  Raphanus raphanistrum subsp. landra
EW714773       --> CCTTAGCAAAGTTTCTACCTTTATCCACTCACTCCATGGCCACCCGTCTT  Raphanus sativus var. oleiformis
EY901075       --> CCTTAGCAAAGTTTCTACCTTTATCCGCTC----CATGGCCACCCGTCTT  Raphanus raphanistrum subsp. maritimus
FD579195       --> CGTTAGCAAAGTTTCTACCTTTATCCGCTC----CATGGCCACCCGTCTT  Raphanus sativus cv Rat-Tail Radish #3870
FY429217       --> CCTTAGCAAAGTTTCTACCTTTATCCGCTC----CATGGCCACCCGTCTT  Raphanus sativus cv GSK3-1
EW714224       --> CCTTAGCAAAGTTTCTACCTTTATCCACTCACTCCATGGCCACCCGTCTT  Raphanus sativus var. oleiformis
EV569244       --> CCTTAGCAAAGTTTCTACCTTTATCCGCTC----CATGGCCACCCGTCTT  Raphanus raphanistrum subsp. landra
FY440665       --> CCTTAGCAAAGTTTCTACCTTTATCCGCTC----CATGGCCACCCGTCTT  Raphanus sativus cv GSK3-1
EV566708       --> ..................................................  Raphanus raphanistrum subsp. landra

               151    -    201
UN23071        --> CAGTTTGAGAACAACTGTGAAGTTGGTGTCTTTTCAAAACTCACTAATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570514       <-- ...TTTGAGAACAACTGTGAAGTTGGTGTCTTT-CAAAACTCACTAATGC
EV570515       <-- ..................................................
EV573831       <-- ..................................................
EW718909       <-- ..................................................
EY942343       <-- ..................................................
EV571777       <-- ..................................................
EV546258       <-- ..................................................
FD583215       <-- ..................................................
EV537845       --> CAGTTTGAGAACAACTGTGAAGTTGGTGTCTTTTCGAAACTCACTAATGC
EV551092       --> CAGTTTGAGAACAACTGTGAAGTTGGTGTCTTTTCGAAACTCACTAATGC
EV565198       --> CAGTTTGAGAACAACTGTGAAGTTGGTGTCTTTTCAAAACTCACTAATGC
EW714773       --> CAGTTTGAGAACAACTGTGAAGTTGGTGTCTTTTCAAAACTCACTAATGC
EY901075       --> CAGTTTGAGAACAACTGTGAAGTTGGTGTCTTTTCGAAACTCACTAATGC
FD579195       --> CAGTTTGAGAACAACTGTGAAGTTGGTGTCTTTTCGAAACTCACTAATGC
FY429217       --> CAGTTTGAGAACAACTGTGAAGTTGGTGTCTTTTCAAAACTCACTAATGC
EW714224       --> CAGTTTGAGAACAACTGTGAAGTTGGTGTCTTTTCAAAACTCACTAGTGC
EV569244       --> CAGTTTGAGAACAACTGTGAAGTTGGTGTCTTTTCAAAACTCACTAATGC
FY440665       --> CAGTTTGAGAACAACTGTGAAGTTGGTGTCTTTTCAAAACTCACTAATGC
EV566708       --> ..................................................

               201    -    251
UN23071        --> CTATTGCTTAGTTGCTATTGGAGGCTCTGAGAACTTTTACAGTGCATTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570514       <-- CTATTGCTTAGTTGCTATTGGAGGCTCTGAGAACTTTTACAGTGCATTTG
EV570515       <-- ...................GGAGGCTCTGAGAACTTTTACAGTGCATTTG
EV573831       <-- ...................GGAGGCTCTGAGAACTTTTACAGTGCATTTG
EW718909       <-- ...................GGAGGCTCTGAGAACTTTTACAGTGCATTTG
EY942343       <-- ..................................................
EV571777       <-- ..................................................
EV546258       <-- ..................................................
FD583215       <-- ..................................................
EV537845       --> CTATTGCTTAGTTGCTATTGGAGGCTCTGAGAACTTTTACAGTGCATTTG
EV551092       --> CTATTGCTTAGTTGCTATTGGAGGCTCTGAGAACTTTTACAGTGCATTTG
EV565198       --> CTATTGCTTAGTTGCTATTGGAGGCTCTGAGAACTTTTACAGTGCATTTG
EW714773       --> CTATTGCTTAGTTGCTATTGGAGGCTCTGAGAACTTTTACAGTGCATTTG
EY901075       --> CTATTGCTTAGTTGCTATTGGAGGCTCTGAGAACTTTTACAGTGCATTTG
FD579195       --> CTATTGCTTAGTTGCTATTGGAGGCTCTGAGAACTTTTACAGTGCATTTG
FY429217       --> CTATTGCTTAGTTGCTATTGGAGGCTCTGAGAACTTTTACAGTGCATTTG
EW714224       --> CTATTGCTTAGTTGCTATTGGAGGCTCTGAGAACTTTTACAGTGCATTTG
EV569244       --> CTATTGCTTAGTTGCTATTGGAGGCTCTGAGAACTTTTACAGTGCATTTG
FY440665       --> CTATTGCTTAGTTGCTATTGGAGGCTCTGAGAACTTTTACAGTGCATTTG
EV566708       --> ..................................................

               251    -    301
UN23071        --> AGTCGGAGTTAGCTGATGTTATCCCTATTGTTAAGACCTCTATTGGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570514       <-- AGTCGGAGTTAGCTGATGTTATCCCTATTGTTAAGACCTCTATTGGAGGA
EV570515       <-- AGTCGGAGTTAGCTGATGTTATCCCTATTGTTAAGACCTCTATTGGAGGA
EV573831       <-- AGTCGGAGTTAGCTGATGTTATCCCTATTGTTAAGACCTCTATTGGAGGA
EW718909       <-- AGTCGGAGTTAGCTGATGTTATCCCTATTGTTAAGACCTCTATTGGAGGA
EY942343       <-- ............................TGTTAAGACCTCTCTTGGAGGA
EV571777       <-- ........................................gATTGGAGGA
EV546258       <-- ..................................................
FD583215       <-- ..................................................
EV537845       --> AGTCGGAGTTAGCTGATGTTATCCCTATTGTTAAGACCTCTCTTGGAGGA
EV551092       --> AGTCGGAGTTAGCTGATGTTATCCCTATTGTTAAGACCTCTCTTGGAGGA
EV565198       --> AGTCGGAGTTAGCTGATGTTATCCCTATTGTTAAGACCTCTATTGGAGGA
EW714773       --> AGTCGGAGTTAGCTGATGTTATCCCTATTGTTAAGACCTCTATTGGAGGA
EY901075       --> AGTCGGAGTTAGCTGATGTTATCCCTATTGTTAAGACCTCTATTGGAGGA
FD579195       --> AGTCGGAGTTAGCTGATGTTATCCCTATTGTTAAGACCTCTATTGGAGGA
FY429217       --> AGTCGGAGTTAGCTGATGTTATCCCTATTGTTAAGACCTCTATTGGAGGA
EW714224       --> AGTCGGAGTTAGCTGATGTTATCCCTATTGTTAAGACCTCTATTGGAGGA
EV569244       --> AGTCGGAGTTAGCTGATGTTATCCCTATTGTTAAGACCTCTATTGGAGGA
FY440665       --> AGTCGGAGTTAGCTGATGTTATCCCTATTGTTAAGACCTCTATTGGAGGA
EV566708       --> ........................................gATTGGAGGA

               301    -    351
UN23071        --> ACACGAATCATTGGCCGTCTATGCGCTGGAAACAAGAATGGGCTTCTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570514       <-- ACACGAATCATTGGCCGTCTATGCGCTGGAAACAAGAATGGGCTTCTTGT
EV570515       <-- ACACGAATCATTGGCCGTCTATGCGCTGGAAACAAGAATGGGCTTCTTGT
EV573831       <-- ACACGAATCATTGGCCGTCTATGCGCTGGAAACAAGAATGGGCTTCTTGT
EW718909       <-- ACACGAATCATTGGCCGTCTATGCGCTGGAAACAAGAATGGGCTTCTTGT
EY942343       <-- ACACGAATCATTGGCCGTCTATGCGCTGGAAACAAGAATGGGCTTCTTGT
EV571777       <-- ACACGAATCATTGGCCGTCTATGCGCTGGAAACAAGAATGGGCTTCTTGT
EV546258       <-- ......................................TGGGCCTCTTGT
FD583215       <-- ..................................................
EV537845       --> ACACGAATCATTGGCCGTCTATGCGCTGGAAACAAGAATGGGCTTCTCGT
EV551092       --> ACACGAATCATTGGCCGTCTATGCGCTGGAAACAAGAATGGGCCTCTTGT
EV565198       --> ACACGAATCATTGGCCGTCTATGCGCTGGAAACAAGAATGGGCTTCTTGT
EW714773       --> ACACGAATCATTGGCCGTCTATGCGCTGGAAACAAGAATGGGCTTCTTGT
EY901075       --> ACACGAATCATTGGCCGTCTATGCGCTGGAAACAAGAATGGGCTTCTTGT
FD579195       --> ACACGAATCATTGGCCGTCTATGCGCTGGAAACAAGAATGGGCTTCTTGT
FY429217       --> ACACGAATCATTGGCCGTCTATGCGCTGGAAACAAGAATGGGCTTCTTGT
EW714224       --> ACACGAATCATTGGCCGTCTATGCGCTGGAAACAAGAATGGGCTTCTTGT
EV569244       --> ACACGAATCATTGGCCGTCTATGCGCTGGAAACAAGAATGGGCTTCTTGT
FY440665       --> ACACGAATCATTGGCCGTCTATGCGCTGGAAACAAGAATGGGCTTCTTGT
EV566708       --> ACACGAATCATTGGCCGTCTATGCGCTGGAAACAAGAATGGGCTTCTTGT

               351    -    401
UN23071        --> GCCTCACACAACTACTGACCAAGAGCTTCAACACTTGAGGAACAGTCTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570514       <-- GCCTCACACAACTACTGACCAAGAGCTTCAACACTTGAGGAACAGTCTAC  Raphanus raphanistrum subsp. landra
EV570515       <-- GCCTCACACAACTACTGACCAAGAGCTTCAACACTTGAGGAACAGTCTAC  Raphanus raphanistrum subsp. landra
EV573831       <-- GCCTCACACAACTACTGACCAAGAGCTTCAACACTTGAGGAACAGTCTAC  Raphanus raphanistrum subsp. landra
EW718909       <-- GCCTCATACAACTACTGACCAAGAGCTTCAACACTTGAGGAACAGTCTAC  Raphanus sativus var. oleiformis
EY942343       <-- GTCTCACACAACTACTGACCAAGAGCTTCAACACTTGAGGAACAGTCTAC  Raphanus sativus cv Rat-Tail Radish #3870
EV571777       <-- GCCTCACACAACTACTGAC-AAGAGCTTCAACACTTGAGGAACAGTCTAC  Raphanus raphanistrum subsp. landra
EV546258       <-- GCCTCACACAACTACTGACCAAGAGCTTCAACACTTGAGGAACAGTCTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD583215       <-- ......tACAACTACTGACCAAGAGCTTCAACACTTGAGGAACAGTCTAC  Raphanus sativus cv Rat-Tail Radish #3870
EV537845       --> ACCTCATACAACTACTGACCAAGAGCTTCAACACTTGAGGAACAGTCTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551092       --> GCCTCACACAACTACTGACCAAGAGCTTCAACACTTGAGGAACAGTCTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565198       --> GCCTCACACAACTACTGACCAAGAGCTTCAACACTTGAGGAACAGTCTAC  Raphanus raphanistrum subsp. landra
EW714773       --> GCCTCATACAACTACTGACCAAGAGCTTCAACACTTGAGGAACAGTCTAC  Raphanus sativus var. oleiformis
EY901075       --> GCCTCATACAACTACTGACCAAGAGCTTCAACACTTGAGGAACAGTCTAC  Raphanus raphanistrum subsp. maritimus
FD579195       --> GCCTCATACAACTACTGACCAAGAGCTTCAACACTTGAGGAACAGTCTAC  Raphanus sativus cv Rat-Tail Radish #3870
FY429217       --> GCCTCACACAACTACTGACCAAGAGCTTCAACACTTGAGGAACAGTCTAC  Raphanus sativus cv GSK3-1
EW714224       --> GCCTCATACAACTACTGACCAAGAGCTTCAACACTTGAGGAACAGTCTAC  Raphanus sativus var. oleiformis
EV569244       --> GCCTCACACAACTACTGACCAAGAGCTTCAACACTTGAGGAACAGTCTAC  Raphanus raphanistrum subsp. landra
FY440665       --> GCCTCACACAACTACTGACCAAGAGCTTCAACACTTGAGGAACAGTCTAC  Raphanus sativus cv GSK3-1
EV566708       --> GCCTCACACAACTACTGAC-AAGAGCTTCAACACTTGAGGAACAGTCTAC  Raphanus raphanistrum subsp. landra

               401    -    451
UN23071        --> CTGATCAAGTTGTGGTCCAGCGAATCGAGGAGCGTCTCTCTGCTCTTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570514       <-- CTGATCAAGTTGTGGTCCAGCGAATCGAGGAGCGTCTCTCTGCTCTTGGA
EV570515       <-- CTGATCAAGTTGTGGTCCAGCGAATCGAGGAGCGTCTCTCTGCTCTTGGA
EV573831       <-- CTGATCAAGTTGTGGTCCAGCGAATCGAGGAGCGTCTCTCTGCTCTTGGA
EW718909       <-- CTGATCAAGTTGTGGTCCAGCGAATCGAGGAGCGTCTCTCTGCTCTTGGA
EY942343       <-- CTGATCAAGTTGTGGTCCAGCGAATTGAGGAGCGTCTCTCTGCTCTTGGA
EV571777       <-- CTGATCAAGTTGTGGTCCAGCGAATCGAGGAGCGTCTCTCTGCTCTTGGA
EV546258       <-- CTGATCAAGTTGTGGTCCAGCGAATTGAGGAGCGTCTCTCTGCTCTTGGA
FD583215       <-- CTGATCAAGTTGTGGTCCAGCGAATCGAGGAGCGTCTCTCTGCTCTTGGA
EV537845       --> CTGATCAAGTTGTGGTCCAGCGAATCGAGGAGCGTCTCTCTGCTCTTGGA
EV551092       --> CTGATCAAGTTGTGGTCCAGCGAATTGAGGAGCGTCTCTCTGCTCTTGGA
EV565198       --> CTGATCAAGTTGTGGTCCAGCGAATCGAGGAGCGTCTCTCTGCTCTTGGA
EW714773       --> CTGATCAAGTTGTGGTCCAGCGAATCGAGGAGCGTCTCTCTGCTCTTGGA
EY901075       --> CTGATCAAGTTGTGGCCCAGCGAATCGAGGAGCGTCTCTCTGCTCTTGGA
FD579195       --> CTGATCAAGTTGTGGTCCAGCGAATCGAGGAGCGTCTCTCTGCTCTTGGA
FY429217       --> CTGATCAAGTTGTGGTCCAGCGAATCGAGGAGCGTCTCTCTGCTCTTGGA
EW714224       --> CTGATCAAGTTGTGGTCCAGCGAATCGAGGAGCGTCTCTCTGCTCTTGGA
EV569244       --> CTGATCAAGTTGTGGTCCAGCGAATCGAGGAGCGTCTCTCTGCTCTTGGA
FY440665       --> CTGATCAAGTTGTGGTCCAGCGAATCGAGGAGCGTCTCTCTGCTCTTGGA
EV566708       --> CTGATCAAGTTGTGGTCCAGCGAATCGAGGAGCGTCTCTCTGCTCTTGGA

               451    -    501
UN23071        --> AATTGCATTGCCTGCAATGACCATGTTGCTCTTGCTCACACCGATCTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570514       <-- AATTGCATTGCCTGCAATGACCATGTTGCTCTTGCTCACACCGATCTCGA  Raphanus raphanistrum subsp. landra
EV570515       <-- AATTGCATTGCCTGCAATGACCATGTTGCTCTTGCTCACACCGATCTCGA  Raphanus raphanistrum subsp. landra
EV573831       <-- AATTGCATTGCCTGCAATGACCATGTTGCTCTTGCTCACACCGATCTCGA  Raphanus raphanistrum subsp. landra
EW718909       <-- AATTGCATTGCCTGCAATGACCATGTTGCTCTTGCTCACACTGATCTTGA  Raphanus sativus var. oleiformis
EY942343       <-- AATTGCATTGCCTGCAATGACCATGTTGCTCTTGCTCACACCGATCTTGA  Raphanus sativus cv Rat-Tail Radish #3870
EV571777       <-- AATTGCATTGCCTGCAATGACCATGTTGCTCTTGCTCACACCGATCTCGA  Raphanus raphanistrum subsp. landra
EV546258       <-- AATTGCATTGCCTGCAATGACCATGTTGCTCTTGCTCACACCGATCTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD583215       <-- AATTGCATTGCCTGCAATGACCATGTTGCTCTTGCTCACACCGATCTTGA  Raphanus sativus cv Rat-Tail Radish #3870
EV537845       --> AATTGCATTGCCTGCAATGACCATGTTGCTCTTGCTCACACCGATCTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551092       --> AATTGCATTGCCTGCAATGACCATGTTGCTCTTGCTCACACCGATCTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565198       --> AATTGCATTGCCTGCAATGACCATGTTGCTCTTGCTCACACCGATCTCGA  Raphanus raphanistrum subsp. landra
EW714773       --> AATTGCATTGCCTGCAATGACCATGTTGCTCTTGCTCACACTGATCTTGA  Raphanus sativus var. oleiformis
EY901075       --> AATTGCATTGCCTGCAATGACCATGTTGCTCTTGCTCACACCGATCTTGA  Raphanus raphanistrum subsp. maritimus
FD579195       --> AATTGCATTGCCTGCAATGACCATGTTGCTCTTGCTCACACCGATCTTGA  Raphanus sativus cv Rat-Tail Radish #3870
FY429217       --> AATTGCATTGCCTGCAATGACCATGTTGCTCTTGCTCACACCGATCTTGA  Raphanus sativus cv GSK3-1
EW714224       --> AATTGCATTGCCTGCAATGACCATGTTGCTCTTGCTCACACTGATCTTGA  Raphanus sativus var. oleiformis
EV569244       --> AATTGCATTGCCTGCAATGACCATGTTGCTCTTGCTCACACCGATCTCGA  Raphanus raphanistrum subsp. landra
FY440665       --> AATTGCATTGCCTGCAATGACCATGTTGCTCTTGCTCACACCGATCTTGA  Raphanus sativus cv GSK3-1
EV566708       --> AATTGCATTGCCTGCAATGACCATGTTGCTCTTGCTCACACCGATCTCGA  Raphanus raphanistrum subsp. landra

               501    -    551
UN23071        --> CAAGGAAACTGAGGAGATAATAGCTGATGTTCTTGGTGTTGAAGTTTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570514       <-- CAAGGAAACTGAGGAGATAATAGCTGATGTTCTTGGTGTTGAAGTTTTCC
EV570515       <-- CAAGGAAACTGAGGAGATAATAGCTGATGTTCTTGGTGTTGAAGTTTTCC
EV573831       <-- CAAGGAAACTGAGGAGATAATAGCTGATGTTCTTGGTGTTGAAGTTTTCC
EW718909       <-- CAAGGAAACTGAGGAGATAATAGCTGATGTTCTTGGTGTTGAAGTTTTCC
EY942343       <-- CAAGGAAACTGAGGAGATAATAGCTGATGTTCTTGGTGTTGAAGTTTTCC
EV571777       <-- CAAGGAAACTGAGGAGATAATAGCTGATGTTCTTGGTGTTGAAGTTTTCC
EV546258       <-- CAAGGAAACTGAGGAGATAATAGCTGACGTTCTTGGTGTTGAAGTTTTCC
FD583215       <-- CAAGGAAACTGAGGAGATAATAGCTGATGTTCTTGGTGTTGAAGTTTTCC
EV537845       --> CAAGGAAACTGAGGAGATAATTGCTGATGTTCTTGGTGTTGAAGTTTTCC
EV551092       --> CAAGGAAACTGAGGAGATAATAGCTGACGTTCTTGGTGTTGAAGTTTTCC
EV565198       --> CAAGGAAACTGAGGAGATAATAGCTGATGTTCTTGGTGTTGAAGTTTTCC
EW714773       --> CAAGGAAACTGAGGAGATAATAGCTGATGTTCTTGGTGTTGAAGTTTTCC
EY901075       --> CAAGGAAACTGAGGAGATAATAGCTGATGTTCTTGGTGTTGAAGTTTTCC
FD579195       --> CAAGGAAACTGAGGAGATAATAGCTGATGTTCTTGGTGTTGAAGTTTTCC
FY429217       --> CAAGGAAACTGAGGAGATAATAGCTGATGTTCTTGGTGTTGAAGTTTTCC
EW714224       --> CAAGGAAACTGAGGAGATAATAGCTGATGTTCTTGGTGTTGAAGTTTTCC
EV569244       --> CAAGGAAACTGAGGAGATAATAGCTGATGTTCTTGGTGTTGAAGTTTTCC
FY440665       --> CAAGGAAACTGAGGAGATAATAGCTGATGTTCTTGGTGTTGAAGTTTTCC
EV566708       --> CAAGGAAACTGAGGAGATAATAGCTGATGTTCTTGGTGTTGAAGTTTTCC

               551    -    601
UN23071        --> GTCAGACAATTGCAGGCAACATTCTTGTGGGCAGCTACTGTGCCTTGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570514       <-- GTCAGACAATTGCAGGCAACATTCTTGTGGGCAGCTACTGTGCCTTGTCC  Raphanus raphanistrum subsp. landra
EV570515       <-- GTCAGACAATTGCAGGCAACATTCTTGTGGGCAGCTACTGTGCCTTGTCC  Raphanus raphanistrum subsp. landra
EV573831       <-- GTCAGACAATTGCAGGCAACATTCTTGTGGGCAGCTACTGTACCTTGTCC  Raphanus raphanistrum subsp. landra
EW718909       <-- GTCAGACAATTGCAGGCAACATTCTTGTGGGCAGCTACTGTGCCTTGTCC  Raphanus sativus var. oleiformis
EY942343       <-- GCCAGACAATTGCAGGCAACATTCTTGTCGGCAGCTACTGTGCCTTGTCC  Raphanus sativus cv Rat-Tail Radish #3870
EV571777       <-- GTCAGACAATTGCAGGCAACATTCTTGTGGGCAGCTACTGTGCCTTGTCC  Raphanus raphanistrum subsp. landra
EV546258       <-- GCCAGACAATTGCAGGCAACATTCTTGTCGGCAGCTACTGTGCCTTGTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD583215       <-- GCCAGACAATTGCAGGCAACATTCTTGTGGGCAGTTACTGTGCCTTGTCC  Raphanus sativus cv Rat-Tail Radish #3870
EV537845       --> GTCAGACAATTGCAGGCAACATTCTTGTCGGCAGCTACTGTGCCTTGTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551092       --> GCCAGACAATTGCAGGCAACATTCTTGTCGGCAGCTACTGTGCCTTGTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565198       --> GTCAGACAATTGCAGGCAACATTCTTGTGGGCAGCTACTGTGCCTTGTCC  Raphanus raphanistrum subsp. landra
EW714773       --> GTCAGACAATTGCAGGCAACATTCTTGTGGGCAGCTACTGTGCCTTGTCC  Raphanus sativus var. oleiformis
EY901075       --> GTCAGACAATTGCAGGCAACATTCTTGTGGGCAGTTACTGTGCCTTGTCC  Raphanus raphanistrum subsp. maritimus
FD579195       --> GCCAGACAATTGCAGGCAACATTCTTGTGGGCAGTTACTGTGCCTTGTCC  Raphanus sativus cv Rat-Tail Radish #3870
FY429217       --> GTCAGACAATTGCAGGCAACATTCTTGTGGGCAGCTACTGTGCCTTGTCC  Raphanus sativus cv GSK3-1
EW714224       --> GTCAGACAATTGCAGGCAACATTCTTGTGGGCAGCTACTGTGCCTTGTCC  Raphanus sativus var. oleiformis
EV569244       --> GTCAGACAATTGCAGGCAACATTCTTGTGGGCAGCTACTGTACCTTGTCC  Raphanus raphanistrum subsp. landra
FY440665       --> GTCAGACAATTGCAGGCAACATTCTTGTGGGCAGCTACTGTGCCTTGTCC  Raphanus sativus cv GSK3-1
EV566708       --> GTCAGACAATTGCAGGCAACATTCTTGTGGGCAGCTACTGTGCCTTGTCC  Raphanus raphanistrum subsp. landra

               601    -    651
UN23071        --> AACAGAGGTGGCATTGTTCATCCTCACACTTCTGTGGAAGACTTGGACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570514       <-- AACAGAGGTGGCATTGTTCATCCTCACACTTCTGTGGAAGACTTGGACGA
EV570515       <-- AACAGAGGTGGCATTGTTCATCCTCACACTTCTGTGGAAGACTTGGACGA
EV573831       <-- AACAGAGGTGGCATTGTTCATCCTCACACTTCTGTGGAAGACTTGGACGA
EW718909       <-- AACAGAGGTGGCATTGTTCATCCTCACACTTCTGTGGAAGACTTGGACGA
EY942343       <-- AACAGAGGTGGCATTGTTCATCCTCACACTTCTGTGGAAGACTTGGACGA
EV571777       <-- AACAGAGGTGGCATTGTTCATCCTCACACTTCTGTGGAAGACTTGGACGA
EV546258       <-- AACAGAGGTGGCATTGTTCATCCTCACACTTCTGTGGAAGACTTGGACGA
FD583215       <-- AACAGAGGTGGCATTGTTCATCCTCACACTTCTGTGGAAGACTTGGACGA
EV537845       --> AACAGAGGTGGCATTGTTCATCCTCACACTTCTGTGGAAGACTTGGACGA
EV551092       --> AACAGAGGTGGCATTGTTCATCCTCACACTTCTGTGGAAGACTTGGACGA
EV565198       --> AACAGAGGTGGCATTGTTCATCCTCACACTTCTGTGGAAGACTTGGACGA
EW714773       --> AACAGAGGTGGCATTGTTCATCCTCACACTTCTGTGGAAGACTTGGACGA
EY901075       --> AACAGAGGTGGCATTGTTCATCCTCACACTTCTGTGGAAGACTTGGACGA
FD579195       --> AAC...............................................
FY429217       --> AACAGAGGTGGCATTGTTCATCCTCACACTTCTGTGGAAGACTTGGACGA
EW714224       --> AACAGAGGTGGCATTGTTCATCCTCACACTTCTGTGGAAGACTTGGACGA
EV569244       --> AACAGAGGTGGCATTGTTCATCCTCACACTTCTGTGGAAGACTTGGACGA
FY440665       --> AACAGAGGTGGCATTGTTCATCCTCACACTTCTGTGGAAGACTTGGACGA
EV566708       --> AACAGAGGTGGCATTGTTCATCCTCACACTTCTGTGGAAGACTTGGACGA

               651    -    701
UN23071        --> GCTCTCAACACTACTTCAAGTCCCGCTCGTTGCCGGAACCGTGAACCGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570514       <-- GCTCTCAACACTACTTCAAGTCCCGCTCGTTGCCGGAACCGTGAACCGTG  Raphanus raphanistrum subsp. landra
EV570515       <-- GCTCTCAACACTACTTCAAGTCCCGCTCGTTGCCGGAACCGTGAACCGTG  Raphanus raphanistrum subsp. landra
EV573831       <-- GCTCTCAACACTACTTCAAGTCCCGCTCGTTGCCGGAACCGTGAACCGTG  Raphanus raphanistrum subsp. landra
EW718909       <-- GCTCTCGACACTACTTCAAGTCCCACTCGTTGCAGGAACCGTGAACCGTG  Raphanus sativus var. oleiformis
EY942343       <-- GCTCTCGACACTACTTCAAGTCCCACTCGTTGCAGGAACCGTGAACCGTG  Raphanus sativus cv Rat-Tail Radish #3870
EV571777       <-- GCTCTCAACACTACTTCAAGTCCCGCTCGTTGCCGGAACCGTGAACCGTG  Raphanus raphanistrum subsp. landra
EV546258       <-- GCTCTCGACACTACTTCAAGTCCCACTCGTTGCAGGAACCGTGAACCGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD583215       <-- GCTCTCGACACTACTTCAAGTCCCACTCGTTGCCGGAACCGTGAACCGTG  Raphanus sativus cv Rat-Tail Radish #3870
EV537845       --> GCTCTCGACACTACTTCAAGTCCCACTCGTTGC-AGAACCGTGAACCGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551092       --> GCTCTCGACACTACTTCAAGTCCCACTCGTTGC-AGAACCGTGAACCGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565198       --> GCTCTCAACACTACTTCAAGTCCCGCTCGTTGCCGGAACCGTGAACCGTG  Raphanus raphanistrum subsp. landra
EW714773       --> GCTCTCGACACTACTTCAAGTCCCACTCGTT...................  Raphanus sativus var. oleiformis
EY901075       --> GCTCTCA-CACTACTTCAAGTCCCGCTCGTTGCCGGA-CCGTGAACCGTG  Raphanus raphanistrum subsp. maritimus
FD579195       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY429217       --> GCTCTCAACACTACTTCAAGTCCCGCTCGTTGCAGGAACCGTGAACCGTG  Raphanus sativus cv GSK3-1
EW714224       --> GCTCTCGACACTACTTCAAGTCCCACTCGTTGCACGAACCGTGAACCGTG  Raphanus sativus var. oleiformis
EV569244       --> GCTCTCAACACTACTTCAAGTCCCGCTCGTTGCCGGAACCGTGAACCGTG  Raphanus raphanistrum subsp. landra
FY440665       --> GCTCTCAACACTACTTCAAGTCCCGCTCGTTGCAGGAACCGTGAACCGTG  Raphanus sativus cv GSK3-1
EV566708       --> GCTCTCAACACTACTTCAAGTCCCGCTCGTTGCCGGAACCGTGAACCGTG  Raphanus raphanistrum subsp. landra

               701    -    751
UN23071        --> GTAGTGAAGTTATAGGTGCGGGAATGACCGTCAATGATTGGACTTCTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570514       <-- GTAGTGAAGTTATAGGTGCGGGAATGACCGTCAATGATTGGACTTCTTTC
EV570515       <-- GTAGTGAAGTTATAGGTGCGGGAATGACCGTCAATGATTGGACTTCTTTC
EV573831       <-- GTAGTGAAGTTATAGGTGCGGGAATGACCGTCAATGATTGGACTTCTTTC
EW718909       <-- GTAGTGAAGTCATAGGTGCGGGAATGACCGTCAATGATTGGACTTCTTTC
EY942343       <-- GTAGTGAAGTTATAGGTGCGGGAATGACCGTCAATGATTGGACTTCTTTT
EV571777       <-- GTAGTGAAGTTATAGGTGCGGGAATGACCGTCAATGATTGGACTTCTTTT
EV546258       <-- GTAGTGAAGTTATAGGTGCGGGAATGACCGTCAATGATTGGACTTCTTTC
FD583215       <-- GTAGTGAAGTTATAGGTGCGGGAATGACCGTCAATGATTGGACTTCTTTT
EV537845       --> GTAGTGAAGTTATAGGTGCGGGAATGACCGTCAATGATTGTACTTCTTTC
EV551092       --> GTAGTGAAGTTATAGGTG................................
EV565198       --> GTAGTGAAGTTATAGGTGCGGGAATGACCGTCAATGATTGGACTTCTTTC
EW714773       --> ..................................................
EY901075       --> GTAGTGAAGTTATAG-TGCGGGA-TGACCGTCA-TGATTGGACTTCTTTC
FD579195       --> ..................................................
FY429217       --> GTAGTGAAGTTATAGGTGCGGGAATGACCGTCAATGATTGGACTTCTTTC
EW714224       --> GTAGTGAAGTCATAGGTGCGGGAATGACCGTCAATGATTGGACTTCTTTC
EV569244       --> GTAGTGAAGTTATAGGTGCGGGAATGACCGTCAATGATTGGACTTCTTTC
FY440665       --> GTAGTGAAGTTATAGGTGCGGGAATGACCGTCAATGATTGGACTTCTTTC
EV566708       --> GTAGTGAAGTTATAGGTGCGGGAATGACCGTCAATGATTGGACTTCTTTC

               751    -    801
UN23071        --> TGCGGTTCAGACACAACCGCAACAGAGCTGTCTGTTATAGACAGCATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570514       <-- TGCGGTTCAGACACAACCGCAACAGAGCTGTCTGTTATAGACAGCATCTT  Raphanus raphanistrum subsp. landra
EV570515       <-- TGCGGTTCAGACACAACCGCAACAGAGCTGTCTGTTATAGACAGCATCTT  Raphanus raphanistrum subsp. landra
EV573831       <-- TGCGGTTCAGACACGACCGCAACAGAGCTGTCTGTTATAGACAGCATCTT  Raphanus raphanistrum subsp. landra
EW718909       <-- TGCGGTTCGGACACAACCGCAACAGAGCTGTCTGTTATAGACAGCATCTT  Raphanus sativus var. oleiformis
EY942343       <-- TGCGGTTCGGACACAACCGCAACAGAGCTGTCTGTTATAGACAGCATCTT  Raphanus sativus cv Rat-Tail Radish #3870
EV571777       <-- TGCGGTTCAGACACAACCGCAACAGAGCTGTCTGTTATAGACAGCATCTT  Raphanus raphanistrum subsp. landra
EV546258       <-- TGCGGTTCGGACACAACCGCAACAGAGCTGTCTGTTATAGACAGCATCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD583215       <-- TGCGGTTCAGACACAACCGCAACAGAGCTGTCTGTTATAGACAGCATCTT  Raphanus sativus cv Rat-Tail Radish #3870
EV537845       --> TGCGGTTCGGACACAACCGCAACAGAGCTGTCTGTTATAG..........  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551092       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565198       --> TGCGGTTCAGACACAACCGCAACAGAGCTGTCTGTTATAGACAGCATCTT  Raphanus raphanistrum subsp. landra
EW714773       --> ..................................................  Raphanus sativus var. oleiformis
EY901075       --> TGCGGTTCAGACACA--CGC-ACAGAGCTGTCTG................  Raphanus raphanistrum subsp. maritimus
FD579195       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY429217       --> TGCGGTTCAGACACAACCGCAACAGAGCTGTCTGTTATAGACAGCATCTT  Raphanus sativus cv GSK3-1
EW714224       --> TGCGGTTCGGACACAACCGCAACAGAGCTGTCTGTTATAGACAGCATCTT  Raphanus sativus var. oleiformis
EV569244       --> TGCGGTTCAGACACGACCGCAACAGAGCTGTCTGTTATAGACAGCATCTT  Raphanus raphanistrum subsp. landra
FY440665       --> TGCGGTTCAGACACAACCGCAACAGAGCTGTCTGTTATAGACAGCATCTT  Raphanus sativus cv GSK3-1
EV566708       --> TGCGGTTCAGACACAACCGCAACAGAGCTGTCTGTTATAGACAGCATCTT  Raphanus raphanistrum subsp. landra

               801    -    851
UN23071        --> CAAGCTAAGGGAAGCCCAACCTAGCTCTATTGTCGACGAGATGAGGAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570514       <-- CAAGCTAAGGGAAGCCCAACCTAGCTCTATTGTCGACGAGATGAGGAAGT
EV570515       <-- CAAGCTAAGGGAAGCCCAACCTAGCTCTATTGTCGACGAGATGAGGAAGT
EV573831       <-- CAAGCTAAGGGAAGCCCAACCTAGCTCTATTGTCGACGAGATGAGGAAGT
EW718909       <-- CAAGCTAAGGGAAGCCCAACCTAGCTCTATTGTCGACGAGATGAGGAAGT
EY942343       <-- CAAGCTAAGGGAAGCCCAACCTAGCTCTATTGTCGACGAGATGAGGAAGT
EV571777       <-- CAAGCTAAGGGAAGCCCAACCTAGCTCTATTGTCGACGAGATGAGGAAGT
EV546258       <-- CAAGCTAAGGGAAGCCCTACCTAGCTCTATTGTCGACGAGATGAGGAAGT
FD583215       <-- CAAGCTAAGGGAAGCCCAACCTAGCTCTATTGTCGACGAGATGAGGAAGT
EV537845       --> ..................................................
EV551092       --> ..................................................
EV565198       --> CAAGCT............................................
EW714773       --> ..................................................
EY901075       --> ..................................................
FD579195       --> ..................................................
FY429217       --> CAAGCTAAGGGAAGCCCAACCTAGCTCTATTGTCGACGAGATGAGGAAGT
EW714224       --> CAAGCTAAGG-AAGCCCAACCTAGCTCT......................
EV569244       --> CAAGCTAAGGGAAGCCCAACCTAGCTCTATTGTCGACGAGATGAGGAAGT
FY440665       --> CAAGCTAAGGGAAGCCCAACCTAGCTCTATTGTCGACGAGATGAGGAAGT
EV566708       --> CAAGCTAAGGGAAGCCCAACCTAGCTCTATTGTCGACGAGATGAGGAAGT

               851    -    901
UN23071        --> CTTTGATCGATACCTATGTTTAAGTTTTGCTTTGTTTT-GATGACACAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570514       <-- CTTTGATCGATACCTATGTTTAAGTTTTGCTTTGTTTT-GATGACACAAC
EV570515       <-- CTTTGATCGATACCTATGTTTAAGTTTTGCTTTGTTTT-GATGACACAAC
EV573831       <-- CTTTGATCGATACCTATGTTTAAGTTTTGCTTTGTTTT-GATGACACAAC
EW718909       <-- CTTTGATCGATACCTATGTTTAAGTTTTGCTTTGTTTT-GATGACACAAC
EY942343       <-- CTTTGATCGATACCTATGTTTAAGTTTTGCTTTATTTTTGATGACACAAC
EV571777       <-- CTTTGATCGATACCTATGTTTAAGTTTTGCTTTGTTTT-GATGACACAAC
EV546258       <-- CTTTGATCGATACCTATGTTTAAGTTTTGCTTTATTTTTGATGACACAAC
FD583215       <-- CTTTGATCGATACCTATGTTTAAGTTTTGCTTTGTTTT-GATGACACAAC
EV537845       --> ..................................................
EV551092       --> ..................................................
EV565198       --> ..................................................
EW714773       --> ..................................................
EY901075       --> ..................................................
FD579195       --> ..................................................
FY429217       --> CTTTGATCGATACCTATGTTTAAGTTTTGCTTT.................
EW714224       --> ..................................................
EV569244       --> CTTTGATCGATACCTATGTTTAAGTTTTGCTTTGTTTT-GATGACACAAC
FY440665       --> CTTTGATCGATACCTATGTTTAAGTTTTGCTTTATTTT-GATGACACAAC
EV566708       --> CTTTGATCGATACCTATGTTTAAGTTTTGCTTTGTTTT-GATGACACAAC

               901    -    951
UN23071        --> AA-CAACATTTCCAAGTGTCAAATGTCTTAAAAGTTTCAGATCTTTTATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570514       <-- AA-CAACATTTCCAAGTGTCAAATGTCTTAAAAGTTTCAGTTCTTTTATG
EV570515       <-- AA-CAACATTTCCAAGTGTCAAATGTCTTAAAAGTTTCAGATCTTTTATG
EV573831       <-- AA-CAACATTTCCAAGTGTCAAATGTCTTAAAAGTTTCAGATCTTTTATG
EW718909       <-- AA-CAACATTTCCAAGTGTCAAATGTCTTAAAAGTTTCAGATCTTTTATG
EY942343       <-- AAACCACATTTCCAAGTGTCAAATGTCTTAAAAGTTTCAGATCTCTTATG
EV571777       <-- AA-CAACATTTCCAAGTGTCAAATGTCTTAAAAGTTTCAGATCTTTTATG
EV546258       <-- AAACCACATTTCCAAGTGTCAAATGTCTTAAAAGTTTCAGATCTCTTATG
FD583215       <-- AA-CAACATTTCCAAGTGTCAAATGTCTTAAAAGTTTCAGATCTTTTATG
EV537845       --> ..................................................
EV551092       --> ..................................................
EV565198       --> ..................................................
EW714773       --> ..................................................
EY901075       --> ..................................................
FD579195       --> ..................................................
FY429217       --> ..................................................
EW714224       --> ..................................................
EV569244       --> AA-CAACATTTCCAAGTGTCAAATGTCTTA....................
FY440665       --> AA-CAACATTTCCAAGTGTCAAATGTCTT.....................
EV566708       --> AA-CAACATTTCCAAGTGTCAAATGTCTTAAAAGTTTCAGATCTTTTATG

               951    -   1001
UN23071        --> GTTTTTGTAGGCTCGGAATATTTCCTTTACTGTTTCAAGAATTGTGTGT-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570514       <-- GTTTTTGTAGGCTCGGAATATTTCCTTTACTGTTTCAAGAATTGTGTGT-
EV570515       <-- GTTTTTGTAGGCTCGGAATATTTCCTTTACTGTTTCAAGAATTGTGTGT-
EV573831       <-- GTTTTTGTAGGCTCGGAATATTTCCTTTACTGTTTCAAGAATTGTGTGT-
EW718909       <-- GTTTTTGTAGGCTCGGAATATTTCCTTTACTGTTTCAAGAATTGTGTGTG
EY942343       <-- GTTTTTGTAGGCTCGGAATATTTCCTTTACTGTTTCAAGAATTGTGTGT-
EV571777       <-- GTTTTTGTAGGCTCGGAATATTTCCTTTACTGTTTCAAGAATTGTGTGT-
EV546258       <-- GTTTTTGTAGGCTCGGAATATTTCCTTTACTGTTTCAAGAATTGTGTGT-
FD583215       <-- GTTTTTGTAGGCTCGGAATATTTCCTTTACTGTTTCAAGAATTGTGTGTG
EV537845       --> ..................................................
EV551092       --> ..................................................
EV565198       --> ..................................................
EW714773       --> ..................................................
EY901075       --> ..................................................
FD579195       --> ..................................................
FY429217       --> ..................................................
EW714224       --> ..................................................
EV569244       --> ..................................................
FY440665       --> ..................................................
EV566708       --> GTTTTTGTAGGCTCGGAATATTTCCTTTACTGTTTCAAGAATTGTGTGT-

               1001   -   1051
UN23071        --> TTTATTGTCATATCAAAAGTTATGAGTTTTTTATGGTCTCATGAATCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570514       <-- TTTATTGTCATATCAAAAGTTATGAGTTTTTTATGGT.............
EV570515       <-- TTTATTGTCATATCAAAAGTTATGAGTTTTTTATGGTCTCATGAATCTCT
EV573831       <-- TTTATTGTCATATCAAAAGTTATGAGTTTTTTATGGTCT...........
EW718909       <-- TTTATTGTCATATCAAAAGTTATGAGTTTTTTATGGTCc...........
EY942343       <-- TTTATTGTCATATCAAAAGTTATGAGGTTTTTATGGTCT...........
EV571777       <-- TTTATTGTCATATCAAAAGTTATGAGTTTTTTATGGTCTCATGAATCTCT
EV546258       <-- TTTATTGTCATATCAAAAGTTATGAGTTTTTTATGGTC............
FD583215       <-- TTTATTGTCATATCAAAAGTTATGAGTTTTTTATGGTCTCATGAATCTCA
EV537845       --> ..................................................
EV551092       --> ..................................................
EV565198       --> ..................................................
EW714773       --> ..................................................
EY901075       --> ..................................................
FD579195       --> ..................................................
FY429217       --> ..................................................
EW714224       --> ..................................................
EV569244       --> ..................................................
FY440665       --> ..................................................
EV566708       --> TTTATTGTCATATCAAAAGTTATGAGTTTTTTATGGTCTCATGAATCTCT

               1051   -   1101
UN23071        --> TAGTTTTTATGGTCTCG
                   ~~~~~~~~~~~~~~~~~
EV570514       <-- .................
EV570515       <-- TAGTTTTTAaaac....
EV573831       <-- .................
EW718909       <-- .................
EY942343       <-- .................
EV571777       <-- TAGTTTTTATGGTCTCG
EV546258       <-- .................
FD583215       <-- TAGTTTTTATGGTCT..
EV537845       --> .................
EV551092       --> .................
EV565198       --> .................
EW714773       --> .................
EY901075       --> .................
FD579195       --> .................
FY429217       --> .................
EW714224       --> .................
EV569244       --> .................
FY440665       --> .................
EV566708       --> TAGTTTTTATGGTCTCG