RadishBase

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Alignment for radish unigene UN23072

               1      -     51
UN23072        --> GGACAATACACAACTTCAGCTT-GAGGTAAAGCTTAAACTTAAAAAAA-T
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975431       <-- GGACAATACACAACTTCAGCTTTGAGGTAAAGCTTAAAC--TAAGAAA--  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720887       <-- ....gATACACAACTTCAGCTT-GAGGTAAAGCTTAAACTTAAAAAAA-T  Raphanus sativus var. oleiformis
EV571488       <-- .....ggACACAACTTCAGCTT-GAGGTAAAGCTTAAACTTAAAAAAA-T  Raphanus raphanistrum subsp. landra
FD985074       <-- .....ggACACAACT-CAGCTT-GAGGTAAAGCTTAAACTTAAAAAAA-T  Raphanus raphanistrum subsp. landra
EW738535       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV539880       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY944197       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX766238       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572930       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV571631       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD975835       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968490       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD935797       <-- ..................................................  Raphanus sativus var. oleiformis
FD967202       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902962       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV565725       --> ..ggAATACACAACTTCAGCTT-GAGGTAAAGCTTAAACTTAAAAAAA-T  Raphanus raphanistrum subsp. landra
EY922214       --> ..ggAATACACAACTTCAGCTT-GAGGTAAAGCTTAAACTTAAAAAAA-T  Raphanus raphanistrum subsp. landra
FD970960       --> ..ggAATACACAACTTCAGCTTTGAGGTAAAGCTTAAACT-AAAAAAA--  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717961       --> ....gATACACAACTTCAGCTT-GAGGTAAAGCTTAAACTTAAAAAAA-T  Raphanus sativus var. oleiformis
FD939749       --> ...ggATACACAACTTCAGCTT-GAGGTAAAGCTTAAACTTAAAAAAA-T  Raphanus sativus var. oleiformis
EV535131       --> .....ggACACAACTTCAGCTTTGAGGTAAAGCTTAAACT-AAAAAAA--  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566334       --> .....ggACACAACTTCAGCTT-GAGGTAAAGCTTAAACTTAAAAAAA-T  Raphanus raphanistrum subsp. landra
EY948499       --> .....ggACACAACTTCAGCTT-GAGGTAAAGCTTAAACTTAAAAAAAAT  Raphanus sativus cv Rat-Tail Radish #3870
FD989271       --> .....ggACACAACTTCAGCTT-GAGGTAAAGCTTAAACTTAAAAAAA-T  Raphanus raphanistrum subsp. landra
FD972627       --> .......ggACAACTTCAGCTTTGAGGTAAAGCTTAAACT-AAAAAAA--  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568133       --> .............agggAGCTT-GAGGTAAAGCTTAAACTTAAAAAAAAT  Raphanus raphanistrum subsp. landra
EY906942       --> ...................tTT-GAGGTAAAGCTTAAACT-AAAAAAA--  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566517       --> ..................................................  Raphanus raphanistrum subsp. landra
FD979388       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734914       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD979861       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               51     -    101
UN23072        --> AAACATAACAGAGATGGGTTTGGTCACAGAGGAGGTGAGAGCTAAGGCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975431       <-- AAACATAACAGATATGGGTTTGGTCACAGAGGAGGTGAGAGCTAAGGCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720887       <-- AAACATAACAGAGATGGGTTTGGTCACAGAGGAGGTGAGAGCTAAGGCCG  Raphanus sativus var. oleiformis
EV571488       <-- AAACATAACAGAGATGGGTTTGGTCACAGAGGAGGTGAGAGCTAAGGCCG  Raphanus raphanistrum subsp. landra
FD985074       <-- AAACATAACAGAGATGGGTTTGGTCACAGAGGAGGTGAGAGCTAATGCCG  Raphanus raphanistrum subsp. landra
EW738535       <-- ..ACATAACAGAGATGGGTTTG-TCACAGAGGAGGTGAGAGCTAAGGCAG  Raphanus sativus cv Rat-Tail Radish #3870
EV539880       <-- .....................................AGAGCTAAGGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY944197       <-- ......................................GAGCTAAGGCAG  Raphanus sativus cv Rat-Tail Radish #3870
EX766238       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572930       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV571631       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD975835       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968490       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD935797       <-- ..................................................  Raphanus sativus var. oleiformis
FD967202       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902962       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV565725       --> AAACATAACAGAGATGGGTTTGGTCACAGAGGAGGTGAGAGCTAAGGCCT  Raphanus raphanistrum subsp. landra
EY922214       --> AAACATAACAGAGATGGGTTTGGTCACAGAGGAGGTGAGAGCTAAGGCCG  Raphanus raphanistrum subsp. landra
FD970960       --> -AACAGAACAGAGATGGGTTTGGTCACAGAGGAGGTGAGAGCTAAGGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717961       --> AAACATAACAGAGATGGGTTTGGTCACAGAGGAGGTGAGAGCTAAGGCCG  Raphanus sativus var. oleiformis
FD939749       --> AAACATAACAGAGATGGGTTTGGTCACAGAGGAGGTGAGAGCTAAGGCCG  Raphanus sativus var. oleiformis
EV535131       --> -AACATAACAGAGATGGGTTTGGTCACAGAGGAGGTGAGAGCTAAGGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566334       --> AAACATAACAGAGATGGGTTTGGTCACAGAGGAGGTGAGAGCTAAGGCCG  Raphanus raphanistrum subsp. landra
EY948499       --> AAACATAATAGAGATGGGTTTGGTCACAGAGGAGGTGAGAGCTAAGGCAG  Raphanus sativus cv Rat-Tail Radish #3870
FD989271       --> AAACATAACAGAGATGGGTTTGGTCACAGAGGAGGTGAGAGCTAATGCCG  Raphanus raphanistrum subsp. landra
FD972627       --> -AACATAACAGAGATGGGTTTGGTCACAGAGGAGGTGAGAGCTAAGGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568133       --> AAACATAACAGAGATGGGTTTGGTCACAGAGGAGGTGAGAGCTAAGGCCG  Raphanus raphanistrum subsp. landra
EY906942       --> AAACATAACAGAGATGGGTTTGGTCACAGAGGAGGTGAGAGCTAAGGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566517       --> ..................................................  Raphanus raphanistrum subsp. landra
FD979388       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734914       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD979861       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               101    -    151
UN23072        --> AGATGTACACAGGAGATGAGATATGCAGAGAGAAGACAAAATGTTTCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975431       <-- AGATGTACACCGGAGATGAGATATGCAGAGAGAAGACAAAATGTTTCCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720887       <-- AGATGTACACAGGAGATGAGATATGCAGAGAGAAGACAAAATGCTTCCTC  Raphanus sativus var. oleiformis
EV571488       <-- AGATGTACACAGGAGATGAGATATGCAGAGAGAAGACAAAATGCTTCCTC  Raphanus raphanistrum subsp. landra
FD985074       <-- AGATGTACACAGGAGATGAGATATGCAGAGAGAAGACAAAATGCTTCCTC  Raphanus raphanistrum subsp. landra
EW738535       <-- AGATGTACACCGGAGATGAGATATGCAGAGAGAAGACAAAACGTTTCCTC  Raphanus sativus cv Rat-Tail Radish #3870
EV539880       <-- AGATGTACACCGGAGATGAGATATGCAGAGAGAAGACAAAATGTTTCCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY944197       <-- AGATGTACACCGGAGATGAGATATGCAGAGAGAAGACAAAATGTTTCCTC  Raphanus sativus cv Rat-Tail Radish #3870
EX766238       <-- ....................ATATGCAGAGAGAAGACAAAATGTTTCCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572930       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV571631       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD975835       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968490       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD935797       <-- ..................................................  Raphanus sativus var. oleiformis
FD967202       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902962       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV565725       --> AGATGTACACAGGAGATGAGATATGCAGAGAGAAGACAAAATGCTTCCTC  Raphanus raphanistrum subsp. landra
EY922214       --> AGATGTACACAGGAGATGAGATATGCAGAGAGAAGACAAAATGCTTCCTC  Raphanus raphanistrum subsp. landra
FD970960       --> AGATGTACACCGGAGATGAGATATGCAGAGAGAAGACAAAATGTTTCCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717961       --> AGATGTACACAGGAGATGAGATATGCAGAGAGAAGACAAAATGCTTCCTC  Raphanus sativus var. oleiformis
FD939749       --> AGATGTACACAGGAGATGAGATATGCAGAGAGAAGACAAAATGCTTCCTC  Raphanus sativus var. oleiformis
EV535131       --> AGATGTACACCGGAGATGAGATATGCAGAGAGAAGACAAAATGTTTCCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566334       --> AGATGTACACAGGAGATGAGATATGCAGAGAGAAGACAAAATGCTTCCTC  Raphanus raphanistrum subsp. landra
EY948499       --> AGATGTACACCGGAGATGAGATATGCAGAGAGAAGACAAAATGTTTCCTC  Raphanus sativus cv Rat-Tail Radish #3870
FD989271       --> AGATGTACACAGGAGATGAGATATGCAGAGAGAAGACAAAATGCTTCCTC  Raphanus raphanistrum subsp. landra
FD972627       --> AGATGTACACCGGAGATGAGATATGCAGAGAGAAGACAAAATGTTTCCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568133       --> AGATGTACACAGGAGATGAGATATGCAGAGAGAAGACAAAATGCTTCCTC  Raphanus raphanistrum subsp. landra
EY906942       --> AGATGTACACCGGAGATGAGATATGCAGAGAGAAGACAAAATGTTTCCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566517       --> ..................................................  Raphanus raphanistrum subsp. landra
FD979388       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734914       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD979861       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               151    -    201
UN23072        --> GAGGAAATATCTATGCCTAATGGCTTACTACCATTGAAGGACATTGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975431       <-- GATGAAATATCTATGCCTAATGGCTTACTACCATTGAAGGACATTGAAGA
EW720887       <-- GAGGAAATATCTATGCCTAATGGCTTACTACCATTGAAGGACATTGAAGA
EV571488       <-- GAGGAAATATCTATGCCTAATGGCTTACTACCATTGAAGGACATTGAAGA
FD985074       <-- GAGGAAATATCTATGCCTAATGGCTTACTACCATTGAAGGACATTGAAGA
EW738535       <-- GAGGAAATATCTATGCCTAATGGCTTACTACCATTGAAGGACATTGAAGA
EV539880       <-- GATGAAATATCTATGCCTAATGGCTTACTACCATTGAAGGACATTGAAGA
EY944197       <-- GAGGAAATATCTATGCCTAATGGCTTACTACCATTGAAGGACATTGAAGA
EX766238       <-- GAGGAAATATCTATGCCTAATGGCTTACTACCATTGAAGGACATTGAAGA
EV572930       <-- ..............GCCTAATGGCTTACTACCATTGAAGGACATTGAAGA
EV571631       <-- ..................................................
FD975835       <-- ..................................................
FD968490       <-- ..................................................
FD935797       <-- ..................................................
FD967202       <-- ..................................................
EY902962       <-- ..................................................
EV565725       --> GAGGAAATATCTATGCCTAATGGCTTACTACCATTGAAGGACATTGAAGA
EY922214       --> GAGGAAATATCTATGCCTAATGGCTTACTACCATTGAAGGACATTGAAGA
FD970960       --> GAGGAAATATCTATGCCTAATGGTTTACTACCATTGAAGGACATTGAAGA
EW717961       --> GAGGAAATATCTATGCCTAATGGCTTACTACCATTGAAGGACATTGAAGA
FD939749       --> GAGGAAATATCTATGCCTAATGGCTTACTACCATTGAAGGACATTGAAGA
EV535131       --> GATGAAATATCTATGCCTAATGGCTTACTACCATTGAAGGACATTGAAGA
EV566334       --> GAGGAAATATCTATGCCTAATGGCTTACTACCATTGAAGGACATTGAAGA
EY948499       --> GAGGAAATATCTATGCCTAATGGCTTACTACCATTGAAGGACATTGAAGA
FD989271       --> GAGGAAATATCTATGCCTAATGGCTTACTACCATTGAAGGACATTGAAGA
FD972627       --> GATGAAATATCTATGCCTAATGGCTTACTACCATTGAAGGACATTGAAGA
EV568133       --> GAGGAAATATCTATGCCTAATGGCTTACTACCATTGAAGGACATTGAAGA
EY906942       --> GATGAAATATCTATGCCTAATGGCTTACTACCATTGAAGGACATTGAAGA
EV566517       --> ..................................................
FD979388       --> ..................................................
EW734914       --> ..................................................
FD979861       --> ..................................................

               201    -    251
UN23072        --> GGTTGGGTATGACAGAGAGTCAGGTGTTGTGTGGCTGAAGCAGAAGCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975431       <-- GGTTGGGTATGACAGAGAGTCAGGTGTTGTGTGGCTGAAGCAGAAACAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720887       <-- GGTTGGGTATGACAGAGAGTCAGGTGTCGTGTGGCTGAAGCAGAAACAGA  Raphanus sativus var. oleiformis
EV571488       <-- GGTTGGGTATGACAGAGAGTTTGGTGTTGTGTGGCTGAAGCAGAAGCAGA  Raphanus raphanistrum subsp. landra
FD985074       <-- GGTTGGGTATGACAGAGAGTTTGGTGTTGTGTGGCTGAAGCAGAAGCAGA  Raphanus raphanistrum subsp. landra
EW738535       <-- GGTTGGGTATGACAGAGAGTCAGGTGTCGTGTGGCTGAAGCAGAAGCAGA  Raphanus sativus cv Rat-Tail Radish #3870
EV539880       <-- GGTTGGGTATGACAGAGAGTCAGGTGTTGTGTGGCTGAAGCAGAAACAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY944197       <-- GGTTGGGTATGACAGAGAGTCAGGTGTCGTGTGGCTGAAGCAGAAACAGA  Raphanus sativus cv Rat-Tail Radish #3870
EX766238       <-- GGTTGGGTATGACAGAGAGTCAGGTGTCGTGTGGCTGAAGCAGAAGCAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572930       <-- GGTTGGTTATTACAGAGAGTCTGGTGTTGTGTGGCTGAAGCAGAAGCAGA  Raphanus raphanistrum subsp. landra
EV571631       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD975835       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968490       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD935797       <-- ..................................................  Raphanus sativus var. oleiformis
FD967202       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902962       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV565725       --> GGTTGGGTATGACAGAGAGTCTGGTGTTGTGTGGCTGAAGCAGAAGCAGA  Raphanus raphanistrum subsp. landra
EY922214       --> GGTTGGGTATGACAGAGAGTCTGGTGTTGTGTGGCTGAAGCAGAAGCAGA  Raphanus raphanistrum subsp. landra
FD970960       --> GGTTGGGTATGACAGAGAGTCAGGTGTCGTGTGGCTGAAGCAGAAGCAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717961       --> GGTTGGGTATGACAGAGAGTCAGGTGTCGTGTGGCTGAAGCAGAAACAGA  Raphanus sativus var. oleiformis
FD939749       --> GGTTGGGTATGACAGAGAGTCAGGTGTCGTGTGGCTGAAGCAGAAACAGA  Raphanus sativus var. oleiformis
EV535131       --> GGTTGGGTATGACAGAGAGTCAGGTGTTGTGTGGCTGAAGCAGAAACAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566334       --> GGTTGGGTATGACAGAGAGTCTGGTGTTGTGTGGCTGAAGCAGAAGCAGA  Raphanus raphanistrum subsp. landra
EY948499       --> GGTTGGGTATGACAGAGAGTCAGGTGTCGTGTGGCTGAAGCAGAAACAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD989271       --> GGTTGGGTATGACAGAGAGTCTGGTGTTGTGTGGCTGAAGCAGAAGCAGA  Raphanus raphanistrum subsp. landra
FD972627       --> GGTTGGGTATGACAGAGAGTCAGGTGTTGTGTGGCTGAAGCAGAAACAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568133       --> GGTTGGTTATTACAGAGAGTCTGGTGTTGTGTGGCTGAAGCAGAAGCAGA  Raphanus raphanistrum subsp. landra
EY906942       --> GGTTGGGTATGACAGAGAGTCAGGTGTTGTGTGGCTGAAGCAGAAACAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566517       --> ..................................................  Raphanus raphanistrum subsp. landra
FD979388       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734914       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD979861       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               251    -    301
UN23072        --> GCATCACCCACAAGTTCGAAAAGATCGATAAGCTTGTCTCCTACGGAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975431       <-- GCAACACCCACAAGTTTGAAAAGATCGATAAGCTTGTCTCCTACGGAACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720887       <-- GCACCACCCACAAGTTTGAAAAGATCGATAAGCTTGTCTCCTACGGAACC  Raphanus sativus var. oleiformis
EV571488       <-- GCATCACCCACAAGTTCGAAAAGATCGATAAGCTTGTTTCCTACGGAACC  Raphanus raphanistrum subsp. landra
FD985074       <-- GCATCACCCACAAGTTCGAAAAGATCGATAAGCTTGTCTCCTACGGAACC  Raphanus raphanistrum subsp. landra
EW738535       <-- GCATCACCCACAAGTTCGAAAAGATTGATAAGCTTGTCTCCTACGGAACC  Raphanus sativus cv Rat-Tail Radish #3870
EV539880       <-- GCATCACCCACAAGTTCGAGAAGATCGATAAGCTTGTCTCCTACGGAACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY944197       <-- GCATCACCCACAAGTTTGAAAAGATCGATAAGCTTGTCTCCTACGGAACC  Raphanus sativus cv Rat-Tail Radish #3870
EX766238       <-- GCATCACCCACAAGTTCGAAAAGATTGATAAGCTTGTCTCCTACGGAACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572930       <-- GCATCACCCACAAGTTCGAAAAGATCGATAAGCTTGTCTCCTACGGAACC  Raphanus raphanistrum subsp. landra
EV571631       <-- .............................gAGCTTGTCTCCTACGGAACC  Raphanus raphanistrum subsp. landra
FD975835       <-- .................................................g  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968490       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD935797       <-- ..................................................  Raphanus sativus var. oleiformis
FD967202       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902962       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV565725       --> GCATCACCCACAAGTTCGAAAAGATCGATAAGCTTGTCTCCTACGGGACC  Raphanus raphanistrum subsp. landra
EY922214       --> GCATCACCCACAAGTTCGAAAAGATCGATAAGCTTGTCTCCTACGGAACC  Raphanus raphanistrum subsp. landra
FD970960       --> GCATCACCCACAAGTTCGAAAAGATTGATAAGCTTGTCTCCTACGGAACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717961       --> GCACCACCCACAAGTTTGAAAAGATCGATAAGCTTGTCTCCTACGGAACC  Raphanus sativus var. oleiformis
FD939749       --> GCATCACCCACAAGTTTGAAAAGATCGATAAGCTTGTCTCCTACGGAACC  Raphanus sativus var. oleiformis
EV535131       --> GCATCACCCACAAGTTCGAGAAGATCGATAAGCTTGTCTCCTACGGAACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566334       --> GCATCACCCACAAGTTCGAAAAGATCGATAAGCTTGTCTCCTACGGAACC  Raphanus raphanistrum subsp. landra
EY948499       --> GCATCACCCACAAGTTTGAAAAGATCGATAAGCTTGTCTCCTACGGAACC  Raphanus sativus cv Rat-Tail Radish #3870
FD989271       --> GCATCACCCACAAGTTCGAAAAGATCGATAAGCTTGTCTCCTACGGAACC  Raphanus raphanistrum subsp. landra
FD972627       --> GCATCACCCACAAGTTCGAGAAGATCGATAAGCTTGTCTCCTACGGAACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568133       --> GCATCACCCACAAGTTCGAAAAGATCGATAAGCTTGTCTCCTACGGAACC  Raphanus raphanistrum subsp. landra
EY906942       --> GCATCACCCACAAGTTCGAGAAGATCGATAAGCTTGTCTCCTACGGAACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566517       --> .............................gAGCTTGTCTCCTACGGAACC  Raphanus raphanistrum subsp. landra
FD979388       --> ......................................TCCTACGGAACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734914       --> ..............................................AACC  Raphanus sativus cv Rat-Tail Radish #3870
FD979861       --> .................................................g  Raphanus raphanistrum subsp. raphanistrum (NY)

               301    -    351
UN23072        --> GAGGTCACTGCCGTGGTCCAGACCGGCAAGATCAAGAAGCTCACTGGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975431       <-- GAGGTCACTGCCGTGGTCCAGACCGGCAAGATCAAGAAGCTCACTGGAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720887       <-- GAGGTCACTGCCGTGGTCCAGACCGGCAAGATTAAGAAGCTCACTGGAGT  Raphanus sativus var. oleiformis
EV571488       <-- GAGGTCACTGCTGTGGTCCAGACCGGAAAGATCAAGAAGCTCACTGGAGT  Raphanus raphanistrum subsp. landra
FD985074       <-- GAGGTCACTGCTGTGGTCCAGACCGGAAAGATCAAGAAGCTCACTGGAGT  Raphanus raphanistrum subsp. landra
EW738535       <-- GAGGTCACTGCCGTGGTCCAGACCGGCAAGATCAAGAAGCTCACTGGAGT  Raphanus sativus cv Rat-Tail Radish #3870
EV539880       <-- GAGGTCACTGCCGTGGTCCAGACCGGCAAGATCAAGAAGCCCACTGGAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY944197       <-- GAGGTCACTGCCGTGGTCCAGACCGGCAAGATCAAGAAGCTCACTGGAGT  Raphanus sativus cv Rat-Tail Radish #3870
EX766238       <-- GAGGTCACTGCCGTGGTCCAGACCGGCAAGATCAAGAAGCTCACTGGAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572930       <-- GAGGTCACTGCTGTGGTCCAGACCGGAAAGATCAAGAAGCTCACTGGAGT  Raphanus raphanistrum subsp. landra
EV571631       <-- GAGGTCACTGCTGTGGTCCAGACCGGAAAGATCAAGAAGCTCACTGGAGT  Raphanus raphanistrum subsp. landra
FD975835       <-- GAGGTCACTGCCGTGGTCCAGACCGGCAAGATCAAGAAGCTCACTGGAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968490       <-- .........................GCAAGATCAAGAAGCTCACTGGAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD935797       <-- ..................................................  Raphanus sativus var. oleiformis
FD967202       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902962       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV565725       --> GAGGTCACTGCTGTGGTCCAGACCGGAAAGATCAAGAAGCTCACTGGAGT  Raphanus raphanistrum subsp. landra
EY922214       --> GAGGTCACTGCTGTGGTCCAGACCGGAAAGATCAAGAAGCTCACTGGAGT  Raphanus raphanistrum subsp. landra
FD970960       --> GAAGTCACTGCCGTGGTCCAGACCGGCAAGATCAAGAAGCTCACTGGAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717961       --> GAGGTCACTGCCGTGGTCCAGACCGGCAAGATTAAGAAGCTCACTGGAGT  Raphanus sativus var. oleiformis
FD939749       --> GAGGTCACTGCCGTGGTCCAGACCGGCAAGATCAAGAAGCTCACTGGAGT  Raphanus sativus var. oleiformis
EV535131       --> GAGGTCACTGCCGTGGTCCAGACCGGCAAGATCAAGAAGCCCACTGGAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566334       --> GAGGTCACTGCTGTGGTCCAGACCGGAAAGATCAAGAAGCTCACTGGAGT  Raphanus raphanistrum subsp. landra
EY948499       --> GAGGTCACTGCCGTGGTCCAGACCGGCAAGATCAAGAAGCTCACTGGAGT  Raphanus sativus cv Rat-Tail Radish #3870
FD989271       --> GAGGTCACTGCTGTGGTCCAGACCGGAAAGATCAAGAAGCTCACTGGAGT  Raphanus raphanistrum subsp. landra
FD972627       --> GAGGTCACTGCCGTGGTCCAGACCGGCAAGATCAAGAAGCTCACTGGAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568133       --> GAGGTCACTGCTGTGGTCCAGACCGGAAAGATCAAGAAGCTCACTGGAGT  Raphanus raphanistrum subsp. landra
EY906942       --> GAGGTCACTGCCGTGGTCCAGACCGGCAAGATCAAGAAGCTCACTGGAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566517       --> GAGGTCACTGCTGTGGTCCAGACCGGAAAGATCAAGAAGCTCACTGGAGT  Raphanus raphanistrum subsp. landra
FD979388       --> GAGGTCACTGCCGTGGTCCAGACCGGCAAGATCAAGAAGCTCACTGGAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734914       --> GAGGTCACTGCCGTGGTCCAGACCGGCAAGATCAAGAAGCTCACTGGAGT  Raphanus sativus cv Rat-Tail Radish #3870
FD979861       --> GAGGTCACTGCCGTGGTCCAGACCGGCAAGATCAAGAAGCTCACTGGAGT  Raphanus raphanistrum subsp. raphanistrum (NY)

               351    -    401
UN23072        --> CAAGGCCAAGGAGCTTCTTATCTGGGTCTCTATCAGTGATATCTATACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975431       <-- CAAGGCCAAGGAGCTTCTTATCTGGGTCTCTATCAGTGATATCTATACAG
EW720887       <-- CAAGGCCAAGGAGCTTCTTATCTGGGTCTCTATCAGTGATATCTATACAG
EV571488       <-- CAAGGCCAAGGAGCTTTTTATTTGGGTCTCTATCAGTGATATCTATACAG
FD985074       <-- CAAGGCCAAGGAGCTTTTTATTTGGGTCTCTATCAGTGATATCTATACAG
EW738535       <-- CAAGGCCAAGGAGCTTCTTATCTGGGTCTCTATCAGTGATATCTATACAG
EV539880       <-- CAAGGCCAAGGAGCTTCTTATCTGGGTCTCTATCAGTGATATCTATACAG
EY944197       <-- CAAGGCCAAGGAGCTTCTTATCTGGGTCTCTATCAGTGATATCTATACAG
EX766238       <-- CAAGGCCAAGGAGCTTCTTATCTGGGTCTCTATCAGTGATATCTATACAG
EV572930       <-- CAAGGCCAAGGAGCTTTTTATTTGGGTCTCTATCAGTGATATCTATACAG
EV571631       <-- CAAGGCCAAGGAGCTTCTTATCTGGGTCTCTATCAGTGATATCTATACAG
FD975835       <-- CAAGGCCAAGGAGCTTCTTATCTGGGTCTCTATCAGTGATATCTATACAG
FD968490       <-- CAAGGCCAAGGAGCTTCTTATCTGGGTCTCTATCAGTGATATCTATACAG
FD935797       <-- ...................ATCTGGGTCTCTATCAGTGATATCTATACAG
FD967202       <-- ........................GGTCTCTATCAGTGATATCTATACAG
EY902962       <-- ..................................................
EV565725       --> CAAGGCCAAGGAGCTTCTTATCTGGGTCTCTATCAGTGATATCTATACAG
EY922214       --> CAAGGCCAAGGAGCTTCTTATCTGGGTCTCTATCAGTGATATCTATACAG
FD970960       --> CAAGGCCAAGGAGCTTCTTATCTGGGTCTCTATCAGTGATATCTATACAG
EW717961       --> CAAGGCCAAGGAGCTTCTTATCTGGGTCTCTATCAGTGATATCTATACAG
FD939749       --> CAAGGCCAAGGAGCTTCTTATCTGGGTCTCTATCAGTGATATCTATACAG
EV535131       --> CAAGGCCAAGGAGCTTCTTATCTGGGTCTCTATCAGTGATATCTATACAG
EV566334       --> CAAGGCCAAGGAGCTTCTTATCTGGGTCTCTATCAGTGATATCTATACAG
EY948499       --> CAAGGCCAAGGAGCTTCTTATCTGGGTCTCTATCAGTGATATCTATACAG
FD989271       --> CAAGGCCAAGGAGCTTCTTATCTGGGTCTCTATCAGTGATATCTATACAG
FD972627       --> CAAGGCCAAGGAGCTTCTTATCTGGGTCTCTATCAGTGATATCTATACAG
EV568133       --> CAAGGCCAAGGAGCTTCTTATCTGGGTCTCTATCAGTGATATCTATACAG
EY906942       --> CAAGGCCAAGGAGCTTCTTATCTGGGTCTCTATCAGTGATATCTATACAG
EV566517       --> CAAGGCCAAGGAGCTTCTTATCTGGGTCTCTATCAGTGATATCTATACAG
FD979388       --> CAAGGCCAAGGAGCTTCTTATCTGGGTCTCTATCAGTGATATCTATACAG
EW734914       --> CAAGGCCAAGGAGCTTCTTATCTGGGTCTCTATCAGTGATATCTATACAG
FD979861       --> CAAGGCCAAGGAGCTTCTTATCTGGGTCTCTATCAGTGATATCTATACAG

               401    -    451
UN23072        --> ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTCTAGGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975431       <-- ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTCTAGGACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720887       <-- ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTCCAGGACT  Raphanus sativus var. oleiformis
EV571488       <-- ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTTTAGGACT  Raphanus raphanistrum subsp. landra
FD985074       <-- ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTTTAGGACT  Raphanus raphanistrum subsp. landra
EW738535       <-- ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTCCAGGACC  Raphanus sativus cv Rat-Tail Radish #3870
EV539880       <-- ATGACAAAGAGAAGATCACTTTCAAGT--CGAACCACACTGTTTAGGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY944197       <-- ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTCTAGGACT  Raphanus sativus cv Rat-Tail Radish #3870
EX766238       <-- ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTCCAGGACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572930       <-- ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTTTAGGACT  Raphanus raphanistrum subsp. landra
EV571631       <-- ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTCTAGGACT  Raphanus raphanistrum subsp. landra
FD975835       <-- ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTCCAGGACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968490       <-- ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTCTAGGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD935797       <-- ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTCCAGGACT  Raphanus sativus var. oleiformis
FD967202       <-- ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTCCAGGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902962       <-- ............................................AGGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV565725       --> ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTCTAGGACT  Raphanus raphanistrum subsp. landra
EY922214       --> ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTCTAGGACT  Raphanus raphanistrum subsp. landra
FD970960       --> ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTCCAGGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717961       --> ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTCCAGGACT  Raphanus sativus var. oleiformis
FD939749       --> ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTCCAGGACT  Raphanus sativus var. oleiformis
EV535131       --> ATGACAAAGAGAAGATCACTTTCAAGTCG--AACCACACTGTCTAGGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566334       --> ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTCTAGGACT  Raphanus raphanistrum subsp. landra
EY948499       --> ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTCTAGGACT  Raphanus sativus cv Rat-Tail Radish #3870
FD989271       --> ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTCTAGGACT  Raphanus raphanistrum subsp. landra
FD972627       --> ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTCTAGGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568133       --> ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTCTAGGACT  Raphanus raphanistrum subsp. landra
EY906942       --> ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTCTAGGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566517       --> ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTCTAGGACT  Raphanus raphanistrum subsp. landra
FD979388       --> ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTCTAGGACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734914       --> ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTCCAGGACC  Raphanus sativus cv Rat-Tail Radish #3870
FD979861       --> ATGACAAAGAGAAGATCACTTTCAAGTCACCAACCACACTGTCCAGGACT  Raphanus raphanistrum subsp. raphanistrum (NY)

               451    -    501
UN23072        --> TT-CCCTGTCTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975431       <-- TT-CCCTGTCTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
EW720887       <-- TT-CCCTGTTTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
EV571488       <-- TT-CCCTGTTTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
FD985074       <-- TT-CCCTGTTTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
EW738535       <-- TT-CCCTGTTTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
EV539880       <-- TT-CCCTGTTTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
EY944197       <-- TT-CCCTGTCTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
EX766238       <-- TT-CCCTGTTTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
EV572930       <-- TT-CCCTGTCTCAGCTTTTGTAGTCCCAGAGGAAGTGGAGCCTGCCAAGG
EV571631       <-- TT-CCCTGTCTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
FD975835       <-- TT-CCCTGTCTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
FD968490       <-- TT-CCCTGTTTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
FD935797       <-- TT-CCCTGTCTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
FD967202       <-- TT-CCCTGTTTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
EY902962       <-- TT-CCCTGTCTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
EV565725       --> TT-CCCTGTCTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
EY922214       --> TT-CCCTGTCTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
FD970960       --> TT-CCCTGTCTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
EW717961       --> TT-CCCTGTCTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
FD939749       --> TT-CCCTGTCTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
EV535131       --> TT-CCCTGTCTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
EV566334       --> TT-CCCTGTCTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
EY948499       --> TT-CTCTGTCTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
FD989271       --> TT-CCCTGTCTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
FD972627       --> TT-CCCTGTCTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
EV568133       --> TT-CCCTGTCTCAGCTTTTGTAGTCCCAGAGGAAGTGGAGCCTGCCAAGG
EY906942       --> TT-CCCTGTCTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
EV566517       --> TT-CCCTGTCTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
FD979388       --> TTTCCCTGTCTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
EW734914       --> TT-CCCTGTCTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG
FD979861       --> TT-CCCTGTCTCAGCTTTTGTAGTCCCAGAGGAAGTGGAACCTGCCAAGG

               501    -    551
UN23072        --> AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975431       <-- AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
EW720887       <-- AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
EV571488       <-- AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
FD985074       <-- AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
EW738535       <-- AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
EV539880       <-- AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
EY944197       <-- AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
EX766238       <-- AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
EV572930       <-- AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
EV571631       <-- AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
FD975835       <-- AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
FD968490       <-- AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
FD935797       <-- AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
FD967202       <-- AAGAAGCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
EY902962       <-- AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAG...
EV565725       --> AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
EY922214       --> AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
FD970960       --> AAGAAGCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
EW717961       --> AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
FD939749       --> AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
EV535131       --> AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
EV566334       --> AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
EY948499       --> AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
FD989271       --> AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
FD972627       --> AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGG...........
EV568133       --> AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
EY906942       --> AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
EV566517       --> AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
FD979388       --> AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
EW734914       --> AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT
FD979861       --> AAGAACCTCTCAAGGAGAAGATCAGTGAAGCCGCCGAGGTCAAGGAGGCT

               551    -    601
UN23072        --> GTTGCAGTCAAGGAGGCCTAATCAAGCTTCTCCCTGCTTCTACTGTTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975431       <-- GTTGCAGTCAAGGAGGCCTAATCAAGCTTCTCACTGCTTCTACTATTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720887       <-- GTTGCAGTCAAGGAGGCCTAATCAAGCTTCTCCCTGCTTCTACTGTTAAA  Raphanus sativus var. oleiformis
EV571488       <-- GTTGCAGTCAAGGAGGCCTAATCAAGCTTCTCCCTGCTTTTACTGTTAAA  Raphanus raphanistrum subsp. landra
FD985074       <-- GTTGCAGTCAAGGAGGCCTAATCAAGCTTCTCCCTGCTTTTACTGTTAAA  Raphanus raphanistrum subsp. landra
EW738535       <-- GTTGCAGTCAAGGAGGCCTAATCAAGCTTCTCACTGCTTCTACTATTAAA  Raphanus sativus cv Rat-Tail Radish #3870
EV539880       <-- GTTGCAGTCAAGGAGACCTAATCAAGCTTCTCCCTGCTTTTACTGTTAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY944197       <-- GTTGCAGTCAAGGAGGCCTAATCAAGCTTCTCCCTGCTTCTACTATTAAA  Raphanus sativus cv Rat-Tail Radish #3870
EX766238       <-- GTTGCAGTCAAGGAGGCCTAATCAAGCTTCTCACTGCTTCTACTATTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572930       <-- GTTGCAGTCAAGGAGGCCTAATCAAGCTTCTCCCTGCTTTTACTGTTAAA  Raphanus raphanistrum subsp. landra
EV571631       <-- GTTGCAGTCAAGGAGGCCTAATCAAGCTTCTCCCTGCTTCTACTGTTAAA  Raphanus raphanistrum subsp. landra
FD975835       <-- GTTGCAGTCAAGGAGGCCTAATCAAGCTTCTCACTGCTTCTACTATTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968490       <-- GTTGCAGTCAAGGAGACCTAATCAAGCTTCTCCCTGCTTCTACTGTTAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD935797       <-- GTTGCAGTCAAGGAGGCCTAATCAAGCTTCTCCCTGCTTCTACTGTTAAA  Raphanus sativus var. oleiformis
FD967202       <-- GTTGCAGTCAAGGAGGCCTAATCAAGCTTCTCCCTGCTTCTACTGTTAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902962       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV565725       --> GTTGCAGTCAAGGAGGCCTAATCAAGCTTCTCCCTGCTTCTACTGTTAAA  Raphanus raphanistrum subsp. landra
EY922214       --> GTTGCAGTCAAGGAGGCCTAATCAAGCTTCTCCCTACTTCTACTGTTAAA  Raphanus raphanistrum subsp. landra
FD970960       --> GTTGCA............................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717961       --> GTTGCAGTCAAGGAGGCCTAATCAAGCTTCTCCCTGCTTCTACTGTTAAA  Raphanus sativus var. oleiformis
FD939749       --> GTTGCAGTCAAGGAGGCCTAATCAAGCTTCTCCCTGCTTCTACTGTTAAA  Raphanus sativus var. oleiformis
EV535131       --> GTTGCAGTCAAGGAGACCTAATCAAGCTTCTCCCTGCTTCTACTGTTAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566334       --> GTTGCAGTCAAGGAGGCCTAATCAAGCTTCTCCCTGCTTCTACTGTTAAA  Raphanus raphanistrum subsp. landra
EY948499       --> GTTGCAGTCAAGGAGGCCTAATCAAGCTTCTCCCTGCTTCTACTATTAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD989271       --> GTTGCAGTCAAGGAGGCCTAATCAAGCTTCTCCCTGCTTCTACTGTTAAA  Raphanus raphanistrum subsp. landra
FD972627       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568133       --> GTTGCAGTCAAGGAGGCCTAATCAAGCTTCTCCCTGCTTCTACTGTTAAA  Raphanus raphanistrum subsp. landra
EY906942       --> GTTGCAGTCAAGGAGACCTAATCAAGCTTCTCCCTGCTTCTACTGTTAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566517       --> GTTGCAGTCAAGGAGGCCTAATCAAGCTTCTCCCTGCTTCTACTGTTAAA  Raphanus raphanistrum subsp. landra
FD979388       --> GTTGCAGTCAAGGAGGCCTAATCAAGCTTCTCACTGCTTCTACTATTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734914       --> GTTGCAGTCAAGGAGGCCTAATCAAGCTTCTCACTGCTTCTACTATTAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD979861       --> GTTGCAGTCAAGGAGGCCTAATCAAGCTTCTCACTGCTTCTACTATTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)

               601    -    651
UN23072        --> AGAGACCAAAATCTATTGAAGTGTACTTCCACAATGTAAAGAGACTATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975431       <-- AGAGACCAAAATCTATTGAAGTGTAATTCAACAATGTAAAGAGACTATTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720887       <-- AGAGACCAAAATCTATTGAAGTGTACTTCCACAATGTAAAGAGACTATTG  Raphanus sativus var. oleiformis
EV571488       <-- AGAGACCAAAATCTATT--GGTGTACTTCCACAATGTAAAGAGACTATTG  Raphanus raphanistrum subsp. landra
FD985074       <-- AGAGACCAAAATCTATT--GGTGTACTTCCACAATGTAAAGAGACTATTG  Raphanus raphanistrum subsp. landra
EW738535       <-- AGAGACCAAAATCTATTGAAGTGTAATTCAACAATGTAAAGAGACTATTG  Raphanus sativus cv Rat-Tail Radish #3870
EV539880       <-- AGAGACCAAAATCTATTGAAGTGTACTTCCACAATGTAAAGAGACTATTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY944197       <-- AGAGACCAAAATCTATTGAAGTGTAATTCAACAATGTAAAGAGACTATTG  Raphanus sativus cv Rat-Tail Radish #3870
EX766238       <-- AGAGACCAAAATCTATTGAAGTGTAATTCAACAATGTAAAGAGACTATTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572930       <-- AGAGACCAAAATCTATT--GGTGTACTTCCACAATGTAAAGAGACTATTG  Raphanus raphanistrum subsp. landra
EV571631       <-- AGAGACCAAAATCTATT--GGTGTACTTCCACAATGTAAAGAGACTATTG  Raphanus raphanistrum subsp. landra
FD975835       <-- AGAGACCAAAATCTATTGAAGTGTAATTCAACAATGTAAAGAGACTATTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968490       <-- AGAGGCCAAAATCTATTGAAGTGTACTTCCACAATGTAAAGAGACTATTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD935797       <-- AGAGACCAAAATCTATTGAAGTGTACTTCCACAATGTAAAGAGACTATTG  Raphanus sativus var. oleiformis
FD967202       <-- AGAGACCAAAATCTATTGAAGTGTAATTCAACAATGTAAAGAGACTATTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902962       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV565725       --> AGAGACCAAAATCTATTG--GTGTACTTCCACAATGTAAAGAGACTATTG  Raphanus raphanistrum subsp. landra
EY922214       --> AGAGACCAAAATCTATTG--GCGTACTTCCACAATGTAAAGAGACTATTG  Raphanus raphanistrum subsp. landra
FD970960       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717961       --> AGAGACCAAAATCTATTGAAGTGTACTTCCACAATGTAAAGAGACTATTG  Raphanus sativus var. oleiformis
FD939749       --> AGAGACCAAAATCTATTGAAGTGTACTTCCACAATGTAAAGAGACTATTG  Raphanus sativus var. oleiformis
EV535131       --> AGAGACCAAAATCTATTGAAGTGTACTTCCACAATGTAAAGAGACTATTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566334       --> AGAGACCAAAATCTATTG--GTGTACTTCCACAATGTAAAGAGACTATTG  Raphanus raphanistrum subsp. landra
EY948499       --> AGAGACCAAAATCTATTGAAGTGTAATTCAACAATGTAAAGAGACTATTG  Raphanus sativus cv Rat-Tail Radish #3870
FD989271       --> AGAGACCAAAATCTATTG--GTGTACTTCCACAATGTAAAGAGACTATTG  Raphanus raphanistrum subsp. landra
FD972627       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568133       --> AGAGACCAAAATCTATTG--GTGTACTTCCACAATGTAAAGAGACTATTG  Raphanus raphanistrum subsp. landra
EY906942       --> AGAGACCAAAATCTATTGAAGTGTACTTCCACAATGTAAAGAGACTATTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566517       --> AGAGACCAAAATCTATTG--GTGTACTTCCACAATGTAAAGAGACTATTG  Raphanus raphanistrum subsp. landra
FD979388       --> AGAGACCAAAATCTATTGAAGTGTAATTCAACAATGTAAAGAGACTATTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734914       --> AGAGACCAAAATCTATTGAAGTGTAATTCAACAATGTAAAGAGACTATTG  Raphanus sativus cv Rat-Tail Radish #3870
FD979861       --> AGAGACCAAAATCTATTGAAGTGTAATTCAACAATGTAAAGAGACTATTG  Raphanus raphanistrum subsp. raphanistrum (NY)

               651    -    701
UN23072        --> AGA-GTTGGTGTTTCTCACTGCTCTTACTCTCATGTATTACC-TACCACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975431       <-- AGA-GTTGGTGTTTCTCACTGCTCTTACTCTCATGTATTATC-TACCACT
EW720887       <-- AGA-GTTGGTGTTTCTCACTGCTCTTACTCTCATGTATTACC-TACCACT
EV571488       <-- AGA-GTTGGTGTTTCTCACTGCTTTTACTCTCATGTATTACC-TACCACT
FD985074       <-- AGA-GTTGGTGTTTCTCACTGCTCTTACTCTCATGTATTACC-TACCACT
EW738535       <-- AGA-GTTGGTGTTTCTCACTGCTCTTACTCTCATGTATTACCCTACCACT
EV539880       <-- AGA-GTTGGTGTTTCTCACTGCTCTTACTCTCATGTATTACC-TACCACT
EY944197       <-- AGA-GTTGGTGATTCTCACTGCTCTTACTCTCATGTATTATC-TACCACT
EX766238       <-- AGA-GTTGGTGTTTCTCACTGCTCTTACTCTCATGTATTACCCTACCACT
EV572930       <-- AGA-GTTGGTGTTTCTCACTGCTCTTACTCTCATGTATTACC-TACCACT
EV571631       <-- AGA-GTTGGTGTTTCTCACTGCTCTTACTCTCATGTATTACC-TACCACT
FD975835       <-- AGA-GTTGGTGTTTCTCACTGCTCTTACTCTCATGTATTACCCTACCACT
FD968490       <-- AGA-GTTGGTGTTTCTCACTGCTCTTACTCTCATGTATTACC-TACCACT
FD935797       <-- AGA-GTTGGTGTTTCTCACTGCTCTTACTTTCATGTATTACC-TACCACT
FD967202       <-- AGA-GTTGGTGTTTCTCACTGCTCTTACTCTCATGTATTATC-TACCACT
EY902962       <-- ..................................................
EV565725       --> AGA-GTTGGTGTTTCTCACTGCTCTTACTCTCATGTATTACC-TACCACT
EY922214       --> AGA-GTTGGTGTTTCCCACTGCTCTTACTCT...................
FD970960       --> ..................................................
EW717961       --> AGA-GTTGGTGTTTCTCACTGCTCTTACTCTCATGTATTACC-TACCACT
FD939749       --> AGA-GTTGGTGTTTCTCACTGC............................
EV535131       --> AGA-GTTGGTGTTTCTCACTGCTCTTACTCTCATGTATTACC-TACCACT
EV566334       --> AGA-GTTGGTGTTTCTCACTGCTCTTACTCTCATGTATTACC-TACCACT
EY948499       --> AGA-GTTGGTGATTCTCACTGCTCTTACTCTCATGTATTATC-TACCACT
FD989271       --> AGA-GTTGGTGTTTCTCACTGCTCTTACTCTCATGTATTACC-TACCACT
FD972627       --> ..................................................
EV568133       --> AGA-GTTGGTGTTTCTCACTGCTCTTACTCTCATGTATTACC-TACCACT
EY906942       --> AGA-GTTGGTGTTTCTCACTGCTCTTACTCTCATGTATTACC-TACCACT
EV566517       --> AGA-GTTGGTGTTTCTCACTGCTCTTACTCTCATGTATTACC-TACCACT
FD979388       --> AGAAGTTGGTGTTTCTCACTGCTCTTACTCTCATGTAT............
EW734914       --> AGA-GTTGGTGTTTCTCACTGCTCTTACTCTCATGTATTACCCTACCACT
FD979861       --> AGA-GTTGGTGTTTCTCACTGCTCTTACTCTCATGTATTACCCTACCACT

               701    -    751
UN23072        --> CGTTTCTGCTTGTTTTACTACATGTAATAAGATGTCAAGATCATCCTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975431       <-- CGTTTCTCCTTATTTT---ACATGTAATAAGTTGTt..............
EW720887       <-- CGTTTCTGCTTGTTTTACTACATGTAATAAGATGTCAAGATCATCCTGTT
EV571488       <-- CGTTTTTGCTTGTTTTACTACATGTAATAAGATGTCAAGATCATCCTGTT
FD985074       <-- CGTTTTTGCTTGTTTTACTACATGTAATAAGATGTCAAGATCATCCTGTT
EW738535       <-- CGTTTCTGCTTGTTTTACTACATGTAATAAGATGTCAAGATCATCCTGTT
EV539880       <-- CGTTTCTGCTTGTTTTACTACATGTAATAAGATGTCAAGATCATCCTGTT
EY944197       <-- CGTTTCTGCTTATTTTACgtgtaataagttgtc.................
EX766238       <-- CGTTTCTGCTTGTTTTACTACATGTAATAAGATGTCAAGATCATCCTGTT
EV572930       <-- CGTTTTTGCTTGTTTTACTACATGTAATAAGATGTCAAGATCATCCTGTT
EV571631       <-- CGTTTCTGCTTGTTTTACTACATGTAATAAGATGTCAAGATCATCCTGTT
FD975835       <-- CGTTTCTGCTTGTTTTACTACATGTAATAAGATGTCAAGATCATCCTGTT
FD968490       <-- CGTTTCTGCTTGTTTTACTACATGTAATAAGATGTCAAGATCATCCTGTT
FD935797       <-- CGTTTCTGCTTGTTTTACTACATGTAATAAGATGTCAAGATCATCCTGTT
FD967202       <-- CGTTTCTGCTTGTTTT---ACATGTAATAAGTTGTCAACATCATCCTGTT
EY902962       <-- ..................................................
EV565725       --> CGTTTCTGCTTGTTTTACTACATGTAATAAGATGTCAAGATCATCCTGTT
EY922214       --> ..................................................
FD970960       --> ..................................................
EW717961       --> CGTTTCTGCTTGTTT-ACTACATGTAATAAGATGTCA-GATCATCCTGTT
FD939749       --> ..................................................
EV535131       --> CGTTTCTGCTTGTTTTACTACAT...........................
EV566334       --> CGTTTCTGCTTGTTTTACTACATGTAATAAGATGTCAAGATCATCCTGTT
EY948499       --> CGTT..............................................
FD989271       --> CGTTTCTGCTTGTTTTACTACATGTAATAAGATGTCAAGATCATCCTGTT
FD972627       --> ..................................................
EV568133       --> CGTTTCTGCTTGTTTTACTACATGTAATAAGATGTCAAGATCATCCTGTT
EY906942       --> CGTTTCTGCTTGTTTTACTACATGTAATAAGATGTCAAGATCATCCTGTT
EV566517       --> CGTTTCTGCTTGTTTTACTACATGTAATAAGATGTCAAGATCATCCTGTT
FD979388       --> ..................................................
EW734914       --> CGTTTCTGCTTGTTT-ACTACATGTA-T-AGATGTCAAGATCATC.....
FD979861       --> CGTTTCTGCTTGTTTTACTACATGTAATAAGATGTCAAGATCATCCTGTT

               751    -    801
UN23072        --> AAACAAAAAAATACCGTAATTATCTATGAACTACATTGAAGTCGGTTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975431       <-- ..................................................
EW720887       <-- AAACAAAAAAATACCGTAATTATCTATG......................
EV571488       <-- ..................................................
FD985074       <-- AAACAAAAAAATACCGTAATTATTTATG......................
EW738535       <-- AAACAAAAAAATACCGTAATTATCTATGAACTACATTGAAGTCGGTTCTG
EV539880       <-- AAgc..............................................
EY944197       <-- ..................................................
EX766238       <-- AAACAAAAAAATACCGTAATTATCTATGAACc..................
EV572930       <-- AAACAAAAAAATACCGTAATTATCTATG......................
EV571631       <-- AAACAAAAAAATACCGTAATTATCTATGAACTACATTGAAGTCGGTTC..
FD975835       <-- AAACAAAAAAA.......................................
FD968490       <-- ..................................................
FD935797       <-- AAACAAAAAAATACCGTAATTATtt.........................
FD967202       <-- cgac..............................................
EY902962       <-- ..................................................
EV565725       --> AAAC..............................................
EY922214       --> ..................................................
FD970960       --> ..................................................
EW717961       --> AAcaa.............................................
FD939749       --> ..................................................
EV535131       --> ..................................................
EV566334       --> ..................................................
EY948499       --> ..................................................
FD989271       --> AA-CAAAAAA........................................
FD972627       --> ..................................................
EV568133       --> AAAC..............................................
EY906942       --> AAACAAAAAAA.......................................
EV566517       --> AAACAAAAAAATACCGTAATTATCTATGAACTACATTGAAGTCGGTTC..
FD979388       --> ..................................................
EW734914       --> ..................................................
FD979861       --> AAACAAAAAAATACCGTAATTATCTATGAACTACATTGAAGTCGGTTCTG

               801    -    851
UN23072        --> TATGTGACTTCAAGAACACTGGAAACATATTAGCAAGCTAAAGTGAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975431       <-- ..................................................
EW720887       <-- ..................................................
EV571488       <-- ..................................................
FD985074       <-- ..................................................
EW738535       <-- TATGTGACTTCAAGAACACTGGAAACATATTAGCAAGCTAAAGTGAAAGC
EV539880       <-- ..................................................
EY944197       <-- ..................................................
EX766238       <-- ..................................................
EV572930       <-- ..................................................
EV571631       <-- ..................................................
FD975835       <-- ..................................................
FD968490       <-- ..................................................
FD935797       <-- ..................................................
FD967202       <-- ..................................................
EY902962       <-- ..................................................
EV565725       --> ..................................................
EY922214       --> ..................................................
FD970960       --> ..................................................
EW717961       --> ..................................................
FD939749       --> ..................................................
EV535131       --> ..................................................
EV566334       --> ..................................................
EY948499       --> ..................................................
FD989271       --> ..................................................
FD972627       --> ..................................................
EV568133       --> ..................................................
EY906942       --> ..................................................
EV566517       --> ..................................................
FD979388       --> ..................................................
EW734914       --> ..................................................
FD979861       --> T.................................................