RadishBase

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Alignment for radish unigene UN23082

               1      -     51
UN23082        --> TCCTGCAAGTAAAGTTTCGGGTTTCAAACAACAAGCAAGCTGTGACTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY939160       <-- TCCTGCAAGTAAAGTTTCGGGTTTCAAACAACAAGCAAGCTGTGACTTGC
FD557397       <-- ..................................................
EV528427       <-- ..................................................
FD540838       <-- ..................................................
EV539192       <-- ..................................................
FD568450       <-- ..................................................
EY916905       <-- ..................................................
EX755926       <-- ..................................................
FD540648       <-- ..................................................
EX755831       <-- ..................................................
EY908518       <-- ..................................................
EX757170       <-- ..................................................
FD541031       <-- ..................................................
EY925955       --> ..................................................
EY904197       --> ..................................................
EV532965       --> ..................................................
FD537101       --> ..................................................
EX760817       --> ..................................................
EV543041       --> ..................................................
EV532424       --> ..................................................
EX759811       --> ..................................................
EY912503       --> ..................................................
EV531891       --> ..................................................
EY926354       --> ..................................................
FD537408       --> ..................................................

               51     -    101
UN23082        --> TACTTGTCACAGATAGCAGTGACAAACAAGCACGGTTAAAGCAGCAACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY939160       <-- TACTTGTCACAGATAGCAGTGACAAACAAGCACGGTTAAAGCAGCAACAT
FD557397       <-- ..................................................
EV528427       <-- ..................................................
FD540838       <-- ..................................................
EV539192       <-- ..................................................
FD568450       <-- ..................................................
EY916905       <-- ..................................................
EX755926       <-- ..................................................
FD540648       <-- ..................................................
EX755831       <-- ..................................................
EY908518       <-- ..................................................
EX757170       <-- ..................................................
FD541031       <-- ..................................................
EY925955       --> ..................................................
EY904197       --> ..................................................
EV532965       --> ..................................................
FD537101       --> ..................................................
EX760817       --> ..................................................
EV543041       --> ..................................................
EV532424       --> ..................................................
EX759811       --> ..................................................
EY912503       --> ..................................................
EV531891       --> ..................................................
EY926354       --> ..................................................
FD537408       --> ..................................................

               101    -    151
UN23082        --> GCAAACAGAACAGTCACATGACCCAGGGACATAGAAACAAACTAGACCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY939160       <-- GCAAACAGAACAGTCACATGACCCAGGGACATAGAAACAAACTAGACCTC
FD557397       <-- ..................................................
EV528427       <-- ..................................................
FD540838       <-- ..................................................
EV539192       <-- ..................................................
FD568450       <-- ..................................................
EY916905       <-- ..................................................
EX755926       <-- ..................................................
FD540648       <-- ..................................................
EX755831       <-- ..................................................
EY908518       <-- ..................................................
EX757170       <-- ..................................................
FD541031       <-- ..................................................
EY925955       --> ..........................GGACATAGAAACAAACTAGACCTC
EY904197       --> ..................................................
EV532965       --> ..................................................
FD537101       --> ..................................................
EX760817       --> ..................................................
EV543041       --> ..................................................
EV532424       --> ..................................................
EX759811       --> ..................................................
EY912503       --> ..................................................
EV531891       --> ..................................................
EY926354       --> ..................................................
FD537408       --> ..................................................

               151    -    201
UN23082        --> AAAAGATTCAAGTTAAGAGTCTTCCCCCAAATAAGATCCTTGATTGCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY939160       <-- AAAAAATTCAAGTTAAGAGTCTTCCCCCAAATAAGATCCTTGATTGCATA
FD557397       <-- ..................................................
EV528427       <-- ..................................................
FD540838       <-- ..................................................
EV539192       <-- ..................................................
FD568450       <-- ..................................................
EY916905       <-- ..................................................
EX755926       <-- ..................................................
FD540648       <-- ..................................................
EX755831       <-- ..................................................
EY908518       <-- ..................................................
EX757170       <-- ..................................................
FD541031       <-- ..................................................
EY925955       --> AAAAGATTCAAGTTAAGAGTCTTCCCCCAAATAAGATCCTTGATTGCATA
EY904197       --> ........CAAGTTAAAAGTCT--CCCCAAATAAAATCCTTGATTGCATA
EV532965       --> ..............AAGAGTCTTCCCCCAAATAAAATCCTTGATTGCATA
FD537101       --> ..............AAGAGTCT--CCCCAAATAAGATCCTTGATTGCATA
EX760817       --> ....................gtctCCCCAAATAAGATCCTTGATTGCATA
EV543041       --> ..................................................
EV532424       --> ..................................................
EX759811       --> ..................................................
EY912503       --> ..................................................
EV531891       --> ..................................................
EY926354       --> ..................................................
FD537408       --> ..................................................

               201    -    251
UN23082        --> ATCTATTTTGGTTCAAAAACAACTCGCTCTATTCCAAAACGGAACAATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY939160       <-- ATCTATTTTGGTTCAAAAACAACTCGCTCTATTCCAAAACGGAACAATCT
FD557397       <-- ..tTATTTTGGTTCAAAAACAACTCGCTCTATTCCAAAACGGAACAATCT
EV528427       <-- .........GGTTCAAAAACAACTCGCTCTATTCCAAAACGGAACAATCT
FD540838       <-- ............TCAAAAACAACTCGCTCTATTCCAAAACGGAACAATCT
EV539192       <-- ................................atccAAACGGAACAATCT
FD568450       <-- ..................................................
EY916905       <-- ..................................................
EX755926       <-- ..................................................
FD540648       <-- ..................................................
EX755831       <-- ..................................................
EY908518       <-- ..................................................
EX757170       <-- ..................................................
FD541031       <-- ..................................................
EY925955       --> ATCTATTTTGGTTCAAAAACAACTCGCTCTATTCCAAAACGGAACAATCT
EY904197       --> -TCTATTTTGGTTCAAAAACAACTCGCTCTATTCCAAAACGGAACAATCT
EV532965       --> ATCTATTTTGGTTCAAAAACAACTCGCTCTATTCCAAAACGGAACAATCT
FD537101       --> -TCTATTTTGGTTCAAAAACAACTCGCTCTATTCCAAAACGGAACAATCT
EX760817       --> -TCTATTTTGGTTCAAAAACAACTCGCTCTATTCCAAAACGGAACAAACT
EV543041       --> .......cTGGTTCAAAAACAACTCGCTCTATTCCAAAACGGAACAATCT
EV532424       --> .........GGTTCAAAAACAACTCGCTCTATTCCAAAACGGAACAATCT
EX759811       --> ..........GTTCAAAAACAACTCGCTCTATTCCAAAACGGAACAATCT
EY912503       --> ........cggcTCAAAAACAACTCGCTCTATTCCAAAACGGAACAATCT
EV531891       --> .............ggAAAACAACTCGCTCTATTCCAAAACGGAACAATCT
EY926354       --> .......................................CGGAACAATCT
FD537408       --> ..................................................

               251    -    301
UN23082        --> CAATATTCCCCAATATTAGTTCTAAAACACTCGATTCATTCCATATGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY939160       <-- CAATATTCCCCAATATTAGTTCTAAAACACTCGATTCATTCCATATGTAA
FD557397       <-- CAATATTCCCCAATATTAGTTCTAAAACACTCGATTCATTCCATATGTAA
EV528427       <-- CAATATTCCCCAATATTAGTTCTAAAACACTCGATTCATTCCATATGTAA
FD540838       <-- CAATATTCCCCAATATTAGTTCTAAAACACTCGATTCATTCCATATGTAA
EV539192       <-- CAATAT-CCCCAATAT-AG-TCT-AAACACTCGATTCAT-CCATATGTA-
FD568450       <-- ..................................................
EY916905       <-- ..................................................
EX755926       <-- ..................................................
FD540648       <-- ..................................................
EX755831       <-- ..................................................
EY908518       <-- ..................................................
EX757170       <-- ..................................................
FD541031       <-- ..................................................
EY925955       --> CAATATTCCCCAATATTAGTTCTAAAACACTCGATTCATTCCATATGTAA
EY904197       --> CAATATTCCCCAATATTAGTTCTAAAACACTCGATTCATTCCATATGTAA
EV532965       --> CAATATTCCCCAATATTAGTTCTAAAACACTCGATTCATTCCATATGTAA
FD537101       --> CAATATTCCCCAATATTAGTTCTAAAACACTCGATTCATTCCATATGTAA
EX760817       --> CAATATTCCCCAATATTAGTTCTAAAACACTCGATTCATTCCATATGTAA
EV543041       --> CAATATTCCCCAATATTAGTTCTAAAACACTCGATTCATTCCATATGTAA
EV532424       --> CAATATTCCCCAATATTAGTTCTAAAACACTCGATTCATTCCATATGTAA
EX759811       --> CAATATTCCCCAATATTAGTTCTAAAACACTCGATTCATTCCATATGTAA
EY912503       --> CAATATTCCCCAATATTAGTTCTAAAACACTCGATTCATTCCATATGTAA
EV531891       --> CAATATTCCCCAATATTAGTTCTAAAACACTCGATTCATTCCATATGTAA
EY926354       --> CAATATTCCCCAATATTAGTTCTAAAACACTCGATTCATTCCATATGTAA
FD537408       --> ..............................TCGATTCATTCCATATGTAA

               301    -    351
UN23082        --> CATCAACGCAACATAGAATAAAAACCAAAACAAAGAAGCGAATCAGCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY939160       <-- CATCAACGCAACATAGAATAAAAACCAAAACAAAGAAGCGAATCAGCAAA
FD557397       <-- CATCAACGCAACATAGAATAAAAACCAAAACAAAGAAGCGAATCAGCAAA
EV528427       <-- CATCAACGCAACATAGAATAAAAACCAAAACAAAGAAGCGAATCAGCAAA
FD540838       <-- CATCAACGCAACATAGAATAAAAACCAAAACAAAGAAGCGAATCAGCAAA
EV539192       <-- CATCAACGCAACATAGA-TAAAA-CCAAA-C-AAGAAGCGAATCAGCAAA
FD568450       <-- ..atcACGCAACATAGAATAAAA-CCAAA-C-AAGAAGAG-ATCAGCAAA
EY916905       <-- ..................................................
EX755926       <-- ..................................................
FD540648       <-- ..................................................
EX755831       <-- ..................................................
EY908518       <-- ..................................................
EX757170       <-- ..................................................
FD541031       <-- ..................................................
EY925955       --> CATCAACGCAACATAGAATAAAAACCAAAACAAAGAAGCGAATCAGCAAA
EY904197       --> CATCAACGCAACATAAAATAAAAACCAAAACAAAGAAGCGAATCAGCAAA
EV532965       --> CATCAACGCAACATAAAATAAAAACCAAAACAAAAAAGCGAATCAGCAAA
FD537101       --> CATCAACGCAACATAGAATAAAAACCAAAACAAAGAAGCGAATCAGCAAA
EX760817       --> CATCAACGCAACATAGAATAAAAACCAAAACAAAGAAGCGAATCAGCAAA
EV543041       --> CATCAACGCAACATAGAATAAAAACCAAAACAAAGAAGCGAATCAGCAAA
EV532424       --> CATCAACGCAACATAGAATAAAAACCAAAACAAAGAAGCGAATCAGCAAA
EX759811       --> CATCAACGCAACATAGAATAAAAACCAAAACAAAGAAGCGAATCAGCAAA
EY912503       --> CATCAACGCAACATAAAATAAAAACCAAAACAAAGAAGCGAATCAGCAAA
EV531891       --> CATCAACGCAACATAGAATAAAAACCAAAACAAAGAAGCGAATCAGCAAA
EY926354       --> CATCAACGCAACATAGAATAAAAACCAAAACAAAGAAGCGAATCAGCAAA
FD537408       --> CATCAACGCAACATAGAATAAAAACCAAAACAAAGAAGCGAATCAGCAAA

               351    -    401
UN23082        --> ACCACGGCAGGACACATCTTGGAACATCTTTTGTTTACTCAAAAGCGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY939160       <-- ACCACGGCAGGACACATCTTGGAACATCTTTTGTTTACTCAAAAGCGTCA  Raphanus sativus cv Early Scarlet Globe
FD557397       <-- ACCACGGCAGGACACATCTTGGAACATCTTTTGTTTACTCAAAAGCGTCA  Raphanus raphanistrum subsp. landra
EV528427       <-- ACCACGGCAGGACACATCTTGGAACATCTTTTGTTTACTCAAAAGCGTCA  Raphanus raphanistrum subsp. maritimus
FD540838       <-- ACCACGGCAGCACACATCTTGGAACATCTTTTGCTTACTCAAAAGCGTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539192       <-- ACCACGGCAGCACACATCTTGGAACATCTTT-GCTTACTCAAAAGCGTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568450       <-- -CCACGGCAGCACACATCTTAGAACATCTTT-GTTTACTCAAAAGCGTCA  Raphanus sativus cv Early Scarlet Globe
EY916905       <-- .CCACGGCAGGACACATCTTGGAACATCTTTTGTTTACTCAAAAGCGTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755926       <-- .....................GAACATCTTT-G-CTACTC-AAAGCGTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540648       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755831       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908518       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757170       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541031       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925955       --> ACCACGGCAGGACACATCTTGGAACATCTTTTGTTTACTCAAAAGCGTCA  Raphanus sativus var. oleiformis
EY904197       --> ACCACGGCGGCACACATCTTGGAACATCTTTTGCTTACTCAAAAGCGTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV532965       --> ACCACGGCAGGACACATCTTGGAACATCTTTTGTTTACTCAAAAGCGTCA  Raphanus raphanistrum subsp. maritimus
FD537101       --> ACCACGGCAGCACACATCTTGGAACATCTTTTGCTTACTCAAAAGCGTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760817       --> ACCACGGCAGCACACATCTTGGAACATCTTTTGCTTACGCAAAAGCGTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543041       --> ACCACGGCAGCACACATCTTGGAACATCTTTTGCTTACTCAAAAGCGTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV532424       --> ACCACGGCAGGACACATCTTGGAACATCTTTTGTTTACTCAAAAGCGTCA  Raphanus raphanistrum subsp. maritimus
EX759811       --> ACCACGGCAGCACACATCTTGGAACATCTTTTGCTTACTCAAAAGCGTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912503       --> ACCACGGCAGGACACATCTTGGAACATCTTTTGTTTACTCAAAAGCGTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV531891       --> ACCACGGCAGGACACATCTTGGAACATCTTTTGTTTACTCAAAAGCGTCA  Raphanus raphanistrum subsp. maritimus
EY926354       --> ACCACGGCAGGACACATCTTGGAACATCTTTTGTTTACTCAAAAGCGTCA  Raphanus sativus var. oleiformis
FD537408       --> ACCACGGCAGCACACATCTTGGAACATCTTTTGCTTACTCAAAAGCGTCA  Raphanus raphanistrum subsp. raphanistrum (MS)

               401    -    451
UN23082        --> TCATCATCATC-T-GGGGAGAGGCTGAGCAGCGGCGGCAATGAGATCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY939160       <-- TCATCATCATCATCGGGGAGAGGCTGAGCAGCGGCGGCAATGAGATCAGC  Raphanus sativus cv Early Scarlet Globe
FD557397       <-- TCATCATCATC---GGGGAGAGGCTGAGCAGCGGCGGCAATGAGATCAGC  Raphanus raphanistrum subsp. landra
EV528427       <-- TCATCATCATC---GGGGAGAGGCTGAGCAGCGGCGGCAATGAGATCAGC  Raphanus raphanistrum subsp. maritimus
FD540838       <-- TCATCATCATC-T-GG-AAGAGGCTGAGCAGCGGCGGCAATGAGATCAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539192       <-- TCATCATCATC-T-GG-AAGAGGCTGAGCAGCGGCGGCAATGAGATCAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568450       <-- TCATCATCAT----CGGGAGAGGCTGAGCTGCGGCGGCAATGAGATCAGC  Raphanus sativus cv Early Scarlet Globe
EY916905       <-- TCATCATCATCATCGGGGAGAGGCTGAGCAGCGGCGGCAATGAGATCAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755926       <-- TCATCATCATC-T---GAAGA-GCTGAGCAGCG-CGGCAATGAGATCAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540648       <-- ..............ctgaAGAGGCTGAGCAGCGGCGGCAATGAGATCAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755831       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908518       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757170       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541031       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925955       --> TCATCATCATC---GGGGAGAGGCTGAGCTGCGGCGGCAATGAGATCAGC  Raphanus sativus var. oleiformis
EY904197       --> TCATCATCATC-T-GG-AAAAGGCTGAGCAGCGGCGGCAATGAAATCAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV532965       --> TCATCATCATC---GGGGAGAGGCTGAGCAGCGGCGGCAATGAGATCAGC  Raphanus raphanistrum subsp. maritimus
FD537101       --> TCATCATCATC-T-GG-AAGAGGCTGAGCAGCGGCGGCAATGAGATCAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760817       --> TCATCATCATC-T-GG-AAGAGGCTGAGCAGCGGCGGCAATGAGATCAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543041       --> TCATCATCATC-T-GG-AAGAGGCTGAGCAGCGGCGGCAATGAGATCAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV532424       --> TCATCATCATC---GGGGAGAGGCTGAGCAGCGGCGGCAATGAGATCAGC  Raphanus raphanistrum subsp. maritimus
EX759811       --> TCATCATCATC-T-GG-AAGAGGCTGAGCAGCGGCGGCAATGAGATCAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912503       --> TCATCATCATCATCGGGGAGAGGCTGAGCAGCGGCGGCAATGAGATCAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV531891       --> TCATCATCATC---GGGGAGAGGCTGAACAGCGGCGGCAATGAAATCAGC  Raphanus raphanistrum subsp. maritimus
EY926354       --> TCATCATCATC---GGGGAGAGGCTGAGCTGCGGCGGCAATGAGATCAGC  Raphanus sativus var. oleiformis
FD537408       --> TCATCATCATC-T-GG-AAGAGGCTGAGCAGCGGCGGCAATGAGATCAGC  Raphanus raphanistrum subsp. raphanistrum (MS)

               451    -    501
UN23082        --> CTCGTTCTTCTGCTGCTCGGCAACGTCGATGTGAACCTCAGGGGGAGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY939160       <-- CTCGTTCTTCTGCTGCTCTGCAACGTCGATGTGAACCTCAGGGGGAGCAA
FD557397       <-- CTCGTTCTTCTGCTGCTCGGCAACGTCGATGTGAACCTCAGGGGGAGCAA
EV528427       <-- CTCGTTCTTCTGCTGCTCGGCAACGTCGATGTGAACCTCAGGGGGAGCAA
FD540838       <-- CTCGTTCTTCTGCTGCTCGGCAACGTCGATGTGAACCTCAGGGGGAGCAA
EV539192       <-- CTCGTTCTTCTGCTGCTCGGCAACGTCGATGTGAACCTCAGGGGGAGCAA
FD568450       <-- CTCGTTCTTCTGCTGCTCGGCAACGTCGATGTGAACCTCAGGGGGAGCAA
EY916905       <-- CTCGTTCTTCTGCTGCTCTGCAACGTCGATGTGAACCTCAGGGGGAGCAA
EX755926       <-- -TCGTTCTTCTGCTGCTCGGCAACGTCGATGTG--ACTCAGGGGGAGCAA
FD540648       <-- CTCGTTCTTCTGCTGCTCGGCAACGTCGATGTGAACCTCAGGGGGAGCAA
EX755831       <-- ....TTCTTCTGCTGCTCGGCAACGTCGATGTGAACCTCAGGGGGAGCAA
EY908518       <-- ........TCTGCTGCTCGGCAACGTCGATGTGAAC-TCAGGGGGAGCAA
EX757170       <-- ..........TGCTGCTCGGCAACGTCGATGTGAAC-TCAGGGGGAGCAA
FD541031       <-- ........................................GGGGGAGCAA
EY925955       --> CTCGTTCTTCTGCTGCTCGGCAACGTCGATGTGAACCTCAGGGGGAGCAA
EY904197       --> CTCGTTCTTCTGCTGCTCGGCAACGTCAATGTGAACCTCAGGGGGAGCAA
EV532965       --> CTCGTTCTTCTGCTGCTCGGCAACGTCGATGTGAACCTCAGGGGGAGCAA
FD537101       --> CTCGTTCTTCTGCTGCTCGGCAACGTCGATGTGAACCTCAGGGGGAGCAA
EX760817       --> CTCGTTCTTCTGCTGCTCGGCAACGTCGATGTGAACCTCAGGGGGAGCAA
EV543041       --> CTCGTTCTTCTGCTGCTCGGCAACGTCGATGTGAACCTCAGGGGGAGCAA
EV532424       --> CTCGTTCTTCTGCTGCTCGGCAACGTCGATGTGAACCTCAGGGGGAGCAA
EX759811       --> CTCGTTCTTCTGCTGCTCGGCAACGTCGATGTGAACCTCAGGGGGAGCAA
EY912503       --> CTCGTTCTTCTGCTGCTCTGCAACGTCGATGTGAACCTCAGGGGGAGCAA
EV531891       --> CTCGTTCTTCTGCTGCTCGGCAACGTCTATGTGAACCT............
EY926354       --> CTCGTTCTTCTGCTGCTCGGCAACGTCGATGTGAACCTCAGGGGGAGCAA
FD537408       --> CTCGTTCTTCTGCTGCTCGGCAACGTCGATGTGAACCTCAGGGGGAGCAA

               501    -    551
UN23082        --> GAGCTGGTGACTCAACAAAGTGAAGGTTAGGGTCGCCTGCAAGTTTCCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY939160       <-- GAGCTGGTGACTCAACGAAGTGGAGGTTAGGGTCGCCAGCAAGTTTCCTA  Raphanus sativus cv Early Scarlet Globe
FD557397       <-- GAGCTGGTGACTCAACAAAGTGAAGGTTAGGGTCGCCAGCAAGCTTCCTA  Raphanus raphanistrum subsp. landra
EV528427       <-- GAGCTGGTGACTCAACAAAGTGAAGGTTAGGGTCGCCAGCAAGCTTCCTA  Raphanus raphanistrum subsp. maritimus
FD540838       <-- GAGCTGGTGACTCAACAAAGTGAAGGTTAGGGTCGCCTGCAAGTTTCCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539192       <-- GAGCTGGTGACTCAACAAAGTGAAGGTTAGGGTCGCCTGCAAGTTTCCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568450       <-- GAGCCGGTGACTCGACAAAGTGAAGGTTAGGGTCGCCTGCAAGTTTCCTA  Raphanus sativus cv Early Scarlet Globe
EY916905       <-- GAGCTGGTGACTCAACAAAGTGGAGGTTAGGGTCGCCAGCAAGTTTCCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755926       <-- GAGCTGGTGACTCAACAAAGTGAAGGTTAGGGTCGCCTGCAAGTTTCCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540648       <-- GAGCTGGTGACTCAACAAAGTGAAGGTTAGGGTCGCCTGCAAGTTTCCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755831       <-- GAGCTGGTGACTCAACAAAGTGAAGGTTAGGGTCGCCTGCAAGTTTCCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908518       <-- GAGCTGGTGACTCAACAAAGTGAAGGTTAGGGTCGCCTGCAAGTTACCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757170       <-- GAGCTGGTGACTCAACAAAGTGAAGGTTAGGGTCGCCTGCAAGTTTCCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541031       <-- GAGCTGGTGACTCAACAAAGTGAAGGTTAGGGTCGCCTGCAAGTTTCCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925955       --> GAGCTGGTGACTCGACAAAGTGAAGGTTAGGATCGCCAGCAAGTTTCCTA  Raphanus sativus var. oleiformis
EY904197       --> GAGCTGGTGACTCAACAAAGTGAAGGTTAGGGTCGCCTGCAAGTTACCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV532965       --> GAGCTGGTGACTCAACAAAGTGAAGGTTAGGGTCGCCAGCAAGCTTCCTA  Raphanus raphanistrum subsp. maritimus
FD537101       --> GAGCTGGTGACTCAACAAAGTGAAGGTTAGGGTCGCCTGCAAGTTTCCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760817       --> GAGCTGGTGACTCAACAAAGTGAAGGTTAGGGTCGCCTGCAAGTTTCCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543041       --> GAGCTGGTGACTCAACAAAGTGAAGGTTAGGGTCGCCTGCAAGTTTCCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV532424       --> GAGCTGGTGACTCAACAAAGTGAAGGTTAGGGTCGCCAGCAAGCTTCCTA  Raphanus raphanistrum subsp. maritimus
EX759811       --> GAGCTGGTGACTCAACAAAGTGAAGGTTAGGGTCGCCTGCAAGTTTCCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912503       --> GAGCTGGTGACTCAACAAAGTGGAGGTTAGGGTCGCCAGCAAGTTTCCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV531891       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY926354       --> GAGCTGGTGACTCGACAAAGTGAAGGTTAGGATCGCCAGCAAGTTTCCTA  Raphanus sativus var. oleiformis
FD537408       --> GAGCTGGTGACTCAACAAAGTGAAGGTTAGGGTCGCCTGCAAGTTTCCTA  Raphanus raphanistrum subsp. raphanistrum (MS)

               551    -    601
UN23082        --> GCGAGGTACAAGAAGGGCTTCTCGAAGTTGTAGTTACTCTTGGCAGATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY939160       <-- GCTAGGTACAAGAAGGGCTTCTCGAAGTTGTAGTTACTCTTGGCAGATAT  Raphanus sativus cv Early Scarlet Globe
FD557397       <-- GCGAGGTACAAGAAGGGCTTCTCGAAGTTGTAGTTACTCTTGGCAGATAT  Raphanus raphanistrum subsp. landra
EV528427       <-- GCGAGGTACAAGAAGGGCTTCTCGAAGTTGTAGTTACTCTTGGCAGATAT  Raphanus raphanistrum subsp. maritimus
FD540838       <-- GCGAGGTACAAGAAGGGCTTCTCGAAGTTGTAGTTACTCTTGGCAGATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539192       <-- GCGAGGTACAAGAAGGGCTTCTCGAAGTTGTAGTTACTCTTGGCAGATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568450       <-- GCGAGGTACAAGAAGGGCTTCTCGAAGTTGTAGTTACTCTTGGCAGATAT  Raphanus sativus cv Early Scarlet Globe
EY916905       <-- GCTAGGTACAAGAAGGGCTTCTCGAAGTTGTAGTTACTCTTGGCAGATAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755926       <-- GCGAGGTACAAGAAGGGCTTCTCGAAGTTGTAGTTACTCTTGGCAGATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540648       <-- GCGAGGTACAAGAAGGGCTTCTCGAAGTTGTAGTTACTCTTGGCAGATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755831       <-- GCGAGGTACAAGAAGGGCTTCTCGAAGTTGTAGTTACTCTTGGCAGATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908518       <-- GCGAGGTACAAGAAGGGCTTCTCGAAGTTGTAGTTACTCTTGGCAGATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757170       <-- GCGAGGTACAAGAAGGGCTTCTCGAAGTTGTAGTTACTCTTGGCAGATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541031       <-- GCGAGGTACAAGAAGGGCTTCTCGAAGTTGTAGTTACTCTTGGCAGATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925955       --> GCTAGGTACAAGAAGGGCTTCTCGAAGTTGTAGTTACTCTGGGCAGATAT  Raphanus sativus var. oleiformis
EY904197       --> GCGAGGTACAAGAAGGGCTTCTCGAAGTTGTAGTTACTCTTGGCAAATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV532965       --> GCGAGGTACAAGAAGGGCTTCTCGAAGTTGTAGTTACTCTTGGCAGATAT  Raphanus raphanistrum subsp. maritimus
FD537101       --> GCGAGGTACAAGAAGGGCTTCTCGAAGTTGTAGTTACTCTTGGCAGATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760817       --> GCGAGGTACAAGAAGGGCTTCTCGAAGTTGTAGTTACTCTTGGCAGATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543041       --> GCGAGGTACAAGAAGGGCTTCTCGAAGTTGTAGTTACTCTTGGCAGATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV532424       --> GCGAGGTACAAGAAGGGCTTCTCGAAGTTGTAGTTACTCTTGGCAGATAT  Raphanus raphanistrum subsp. maritimus
EX759811       --> GCGAGGTACAAGAAGGGCTTCTCGAAGTTGTAGTTACTCTTGGCAGATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912503       --> GCTAGGTACAAGAAGGGCTTCTCGAAGTTGTAGTTACTCTTGGCAGATAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV531891       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY926354       --> GCTAGGTACAAGAAGGGCTTCTCGAAGTTGTAGTTACTCTTGGCAGATAT  Raphanus sativus var. oleiformis
FD537408       --> GCGAGGTACAAGAAGGGCTTCTCGAAGTTGTAGTTACTCTTGGCAGATAT  Raphanus raphanistrum subsp. raphanistrum (MS)

               601    -    651
UN23082        --> CTCATAGTACTGCAGATTCTTCTTCCTGTGGAACGTCACCTGCTTGGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY939160       <-- CTCATAGTACTGCAGATTCTTCTTCCcc......................
FD557397       <-- CTCATAGTACTGCGGATTCTTCTTCCTGTGGAAGGTCACCTGCTTGGCCT
EV528427       <-- CTCATAGTACTGCAGATTCTTCTTCCTGTGGAAGGTCACCTGCTTGGCCT
FD540838       <-- CTCATAGTACTGCAGATTCTTCTTCCTGTGGAACGTCACCTGCTTGGCCT
EV539192       <-- CTCATAGTACTGCAGATTCTTCTTCCTGTGGAACGTCACCTGCTTGGCCT
FD568450       <-- CCCATAGTACTGGAGATTCTTCTTCCTGTGGAACGTCACCTGCTTGGCCT
EY916905       <-- CTCATAGTACTGCAGATTCTTCTTCCTGTGGAACGTCACCTGCTTGGCCT
EX755926       <-- CTCATAGTACTGCAGATTCTTCTTCCTGTGGAACGTCACCTGCTTGGCCT
FD540648       <-- CTCATAGTACTGCAGATTCTTCTTCCTGTGGAACGTCACCTGCTTGGCCT
EX755831       <-- CTCATAGTACTGCAGATTCTTCTTCCTGTGGAACGTCACCTGCTTGGCCT
EY908518       <-- CTCATAGTACTGCGGATTCTTCTTCCTGTGGAACGTCACCTGCTTGGCCT
EX757170       <-- CTCATAGTACTGCAGATTCTTCTTCCTGTGGAACGTCACCTGCTTGGCCT
FD541031       <-- CTCATAGTACTGCAGATTCTTCTTCCTGTGGAACGTCACCTGCTTGGCCT
EY925955       --> CTCGTAGTACTGCAGATTCTTCTTCCTGTGGAACGTCACCTGCTTGGCCT
EY904197       --> CTCATAGTACTGCGGATTCTTCTTCCTGTGGAACGTCACCTGCTTGGCCT
EV532965       --> CTCATAGTACTGCAAATTCTTCTTCCTGTGGAAGGTCACCTGCTTGGCCT
FD537101       --> CTCATAGTACTGCAGATTCTTCTTCCTGTGGAACGTCACCTGCTTGGCCT
EX760817       --> CTCATAGTACTGCAGATTCTTCTTCCTGTGGAACGTCACCTGCTTGGCCT
EV543041       --> CTCATAGTACTGCAGATTCTTCTTCCTGTGGAACGTCACCTGCTTGGCCT
EV532424       --> CTCATAGTACTGCAGATTCTTCTTCCTGTGGAAGGTCACCTGCTTGGCCT
EX759811       --> CTCATAGTACTGCAGATTCTTCTTCCTGTGGAACGTCACCTGCTTGGCCT
EY912503       --> CTCATAGTACTGCAGATTCTTCTTCCTGTGGAACGTCACCTGCTTGGCCT
EV531891       --> ..................................................
EY926354       --> CTCGTAGTACTGCAGATTCTTCTTCCTGTGGAACGTCACCTGCTTGGCCT
FD537408       --> CTCATAGTACTGCAGATTCTTCTTCCTGTGGAACGTCACCTGCTTGGCCT

               651    -    701
UN23082        --> TGACTTGCCTGTTCTTGACATCGACTTTGTTCCCGCAGAGAACAATAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY939160       <-- ..................................................
FD557397       <-- TGACTTGCCTGTTCTTGACATCGACTTTGTTCCCGCAGAGAACAATAGGG
EV528427       <-- TGACTTGCCTGTTCTTGACATCGACTTTGTTCCCGCAGAGAACAATAGGG
FD540838       <-- TGACTTGCCTGTTCTTGACATCGACTTTGTTCCCGCAGAGAACAATAGGG
EV539192       <-- TGACTTGCCTGTTCTTGACATCGACTTTGTTACCGCAGAGAACAATAGGG
FD568450       <-- TGACTTGCCTGTTCTTGACATCGACCTTGTTCCCGCAGAGAACAATAGGG
EY916905       <-- TGACTTGCCTGTTCTTGACATCAACTTTGTTCCCGCAGAGAACAATAGGG
EX755926       <-- TGACTTGCCTGTTCTTGACATCGACTTTGTTCCCGCAGAGAACAATAGGG
FD540648       <-- TGACTTGCCTGTTCTTGACATCGACTTTGTTCCCGCAGAGAACAATAGGG
EX755831       <-- TGACTTGCCTGTTCTTGACATCGACTTTGTTCCCGCAGAGAACAATAGGG
EY908518       <-- TGACTTGCCTGTTCTTGACATCGACTTTGTTCCCGCAGAGAACAATAGGG
EX757170       <-- TGACTTGCCTGTTCTTGACATCGACTTTGTTCCCGCAGAGAACAATAGGG
FD541031       <-- TGACTTGCCTGTTCTTGACATCGACTTTGTTCCCGCAGAGAACAATAGGG
EY925955       --> TGACTTGCCTGTTCTTCACGTCGACTTTGTTCCCGCAGAGAACAATAGGG
EY904197       --> TGACTTGCCTGTTCTTGACATCGACTTTGTTCCCGCAAAGAACAATAGGG
EV532965       --> TGACTTGCCTG.......................................
FD537101       --> TGACTTGCCTGTTCTTGACATCGACTTTGTTCCCGCAGAAAACAATAGGG
EX760817       --> TGACTTGCCTGTTCTTGACATCGACTTTGTTCCCGCAGAGAACAATAGGG
EV543041       --> TGACTTGCCTGTTCTTGACATCGACTTTGTTACCGCAGAGAACAATAGGG
EV532424       --> TGACTTGCCTGTTCTTGACATCGACTTTGTTCCCGCAGAAAACAATAGGG
EX759811       --> TGACTTGCCTGTTCTTGACATCGACTTTGTTCCCGCAGAGAACAATAGGG
EY912503       --> TGACTTGCCTGTTCTTGACATCAACTTTGTTCCCGCAGAGAACAATAGGG
EV531891       --> ..................................................
EY926354       --> TGACTTGCCTGTTCTTCACGTCGACTTTGTTCCCGCAGAGAACAATAGGG
FD537408       --> TGACTTGCCTGTTCTTGACATCGACTTTGTTCCCGCAGAGAACAATAGGG

               701    -    751
UN23082        --> ATGTTCTCACACACCCTGCATAGATCACGGTGCCATGTCGGAACGTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY939160       <-- ..................................................
FD557397       <-- ATGTTCTCACACACCCTGCATAGATCACGGTGCCATGTCGGAACGTTCTT
EV528427       <-- ATGTTCTCACACACCCTGCATAGATCACGGTGCCATGTCGGAACGTTCTT
FD540838       <-- ATGTTCTCACACACCCTGCATAGATCACGGTGCCATGTCGGAACGTTCTT
EV539192       <-- ATGTTCTCACACACCCTGCATAGATCACGGTGCCATGTCGGAACGTTCTT
FD568450       <-- ATGTTCTCACACACCCTGCAGAGATCACGGTGCCATGTCGGAACGTTCTT
EY916905       <-- ATGTTCTCACACACCCTGCATAGATCACGGTGCCATGTCGGAACGTTCTT
EX755926       <-- ATGTTCTCACACACCCTGCATAGATCACGGTGCCATGTCGGAACGTTCTT
FD540648       <-- ATGTTCTCACACACCCTGCATAGATCACGGTGCCATGTCGGAACGTTCTT
EX755831       <-- ATGTTCTCACACACCCTGCATAGATCACGGTGCCATGTCGGAACGTTCTT
EY908518       <-- ATGTTCTCACACACCCTGCATAGATCACGGTGCCATGTCGGAACGTTCTT
EX757170       <-- ATGTTCTCACACACCCTGCATAGATCACGGTGCCATGTCGGAACGTTCTT
FD541031       <-- ATGTTCTCACACACCCTGCATAGATCACGGTGCCATGTCGGAACGTTCTT
EY925955       --> ATGTTCTCACACACCCTGCATAGATCACGGTGCCATGTCGGAACGTTCTT
EY904197       --> ATGTTCTCACACACCCTGCATAGATCACGGTGCCATGTCGGAACGTTCTT
EV532965       --> ..................................................
FD537101       --> ATGTTCTCACACACCCTGCATAGATCACGGTGCCATGTCGGAACGTTCTT
EX760817       --> ATGTTCTCACACACCCTGCATAGATCACGGTGCCATGTCGGAACGTTCTT
EV543041       --> ATGTTCTCACACACCCTGCATAGATCACGGTGCCATGTCGGAACGTTCTT
EV532424       --> ATGTTCTCACACACCCTGCATAGATCACGGTGCCATGTCGGAACGTTCTT
EX759811       --> ATGTTCTCACACACCCTGCATAGATCACGGTGCCATGTCGGAACGTTCTT
EY912503       --> ATGTTCTCACACACCCTGCATAGATCACGGTGCCATGTCGGAACGTTCTT
EV531891       --> ..................................................
EY926354       --> ATGTTCTCACACACCCTGCATAGATCACGGTGCCATGTCGGAACGTTCTT
FD537408       --> ATGTTCTCACACACCCTGCATAGATCACGGTGCCATGTCGGAACGTTCTT

               751    -    801
UN23082        --> GTATGTGAGCCGCGCTGTGACGTCAAACATAATCACTGCACATTGACCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY939160       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD557397       <-- GTATGTGAGCCGCGCTGTGACGTCAAACATAATTACTGCACATTGACCAT  Raphanus raphanistrum subsp. landra
EV528427       <-- GTATGTGAGCCGCGCTGTGACGTCAAACATAATTACTGCACATTGACCAT  Raphanus raphanistrum subsp. maritimus
FD540838       <-- GTATGTGAGCCGCGCTGTGACGTCAAACATAATCACTGCACATTGACCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539192       <-- GTATGTGAGCCGCGCTGTGACGTCAAACATAATCACTGCACATTGACCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568450       <-- GTATGTGAGCCGCGCTGTGACGTCAAACATAATTACTGCACATTGACCAT  Raphanus sativus cv Early Scarlet Globe
EY916905       <-- GTATGTGAGCCGCGCTGTGACGTCAAACATAATTACTGCACATTGACCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755926       <-- GTATGTGAGCCGCGCTGTGACGTCAAACATAATCACTGCACATTGACCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540648       <-- GTATGTGAGCCGCGCTGTGACGTCAAACATAATCACTGCACATTGACCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755831       <-- GTATGTGAGCCGCGCTGTGACGTCAAACATAATCACTGCACATTGACCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908518       <-- GTATGTGAGCCGCGCTGTGACGTCAAACATAATCACTGCACATTGACCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757170       <-- GTATGTGAGCCGCGCTGTGACGTCAAACATAATCACTGCACATTGACCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541031       <-- GTATGTGAGCCGCGCTGTGACGTCAAACATAATCACTGCACATTGACCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925955       --> GTATGTGAGCCGCG-----ACGTCAAACATAATTACTGCACATTGACCAT  Raphanus sativus var. oleiformis
EY904197       --> GTATGTGAGCCGCGCTGTGACGTCAAACATAATCACTGCACATTGACCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV532965       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD537101       --> GTATGTGAGCCGCGCTGTGACGTCAAACATAATCACTGCACATTGACCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760817       --> GTATGTGAGCCGCGCTGTGACGTCAAACATAATCACTGCACATTGACCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543041       --> GTATGTGAGCCGCGCTGTGACGTCAAACATAATCACTGCACATTGACCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV532424       --> GTATGTGAGCCGCGCTGTGACGTCAAACATAATTACTGCACATTGACCAT  Raphanus raphanistrum subsp. maritimus
EX759811       --> GTATGTGAGCCGCGCTGTGACGTCAAACATAATCACTGCACATTGACCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912503       --> GTATGTGAGCCGCGCTGTGACGTCAAACATAATTACTGCACATTGACCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV531891       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY926354       --> GTATGTGAGCCGCGCGGTGACGTCAAACATAATTACTGCACATTGACCAT  Raphanus sativus var. oleiformis
FD537408       --> GTATGTGAGCCGCGCTGTGACGTCAAACATAATCACTGCACATTGACCAT  Raphanus raphanistrum subsp. raphanistrum (MS)

               801    -    851
UN23082        --> GGATGTAGTAACCATCCCTAAGGCCACCGAACTTCTCTTGACCAGCAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY939160       <-- ..................................................
FD557397       <-- GGATGTAGTAACCATCCCTAAGGCCACCGAACTTCTCTcc..........
EV528427       <-- GGATGTAGTAACCATCCCTAAGGCCACCGAACTTCTCTTGACCAGCAGTA
FD540838       <-- GGATGTAGTAACCATCCCTAAGGCCACCGAACTTCTCTTGACCAGCAGTA
EV539192       <-- GGATGTAGTAACCATCCCTAAGGCCACCGAACTTCTCTTGACCAGCAGTA
FD568450       <-- GGATGTAGTAGCCATCCCTAAGGCCACCGAACTTCTCTTGACCAGCAGTA
EY916905       <-- GGATGTAGTAACCATCCCTAAGGCCACCGAACTTCTCTTGACCAGCAGTA
EX755926       <-- GGATGTAGTAACCATCCCTAAGGCCACCGAACTTCTCTTGACCAGCAGTA
FD540648       <-- GGATGTAGTAACCATCCCTAAGGCCACCGAACTTCTCTTGACCAGCAGTA
EX755831       <-- GGATGTAGTAACCATCCCTAAGGCCACCGAACTTCTCTTGACCAGCAGTA
EY908518       <-- GGATGTAGTAACCATCCCTAAGGCCACCGAACTTCTCTTGACCAGCAGTA
EX757170       <-- GGATGTAGTAACCATCCCTAAGGCCACCGAACTTATCTTGACCAGCAGTA
FD541031       <-- GGATGTAGTAACCATCCCTAAGGCCACCGAACTTCTCTTGACCAGCAGTA
EY925955       --> GGATGTAGTAACCATCCCTAAGGCCACCGAACTTCTCTTGACCAGCAGTA
EY904197       --> GGATGTAGTAACCATCCCTAAGGCCACCGAACTTCTCTTGACCAGCAGTA
EV532965       --> ..................................................
FD537101       --> GGATGTAGTAACCATCCCTAAGGCCACCGAACTTCTCTTGACCAGCAGTA
EX760817       --> GGATGTAGTAACCATCCCTAAGGCCACCGAACTTATCTTGACCAGCAGTA
EV543041       --> GGATGTAGTAACCATCCCTAAGGCCACCGAACTTCTCTTGACCAGCAGTA
EV532424       --> GGATGTAGTAACCATCCCTAAGGCCACCGAACTTCTCTTGACCAGCAGTA
EX759811       --> GGATGTAGTAACCATCCCTAAGGCCACCGAACTTCTCTTGACCAGCAGTA
EY912503       --> GGATGTAGTAACCATCCCTAAGGCCACCGAACTTCTCTTGACCAGCAGTA
EV531891       --> ..................................................
EY926354       --> GGATGTAGTAACCATCCCTAAGGCCACCGAACTTCTCTTGACCAGCAGTA
FD537408       --> GGATGTAGTAACCATCCCTAAGGCCACCGAACTTCTCTTGACCAGCAGTA

               851    -    901
UN23082        --> TCCCAGCAGTAGAAACGGATCTTGCCACAGTTTGTGAAGAAATCCAAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY939160       <-- ..................................................
FD557397       <-- ..................................................
EV528427       <-- TCCCAGCAGTAGAAACGGATCTTGCCACAGTTTGTGAAGAAATCCAAAGG
FD540838       <-- TCCCAGCAGTAGAAACGGATCTTGCCACAGTTTGTGAAGAAATCCAAAGG
EV539192       <-- TCCCAGCAGTAGAAACGGATCTTGCCACAGTTTGTGAAGAAATCCAAAGG
FD568450       <-- TCCCAGCAGTAGAAACGGATCTTGCCACAGTTAGTGAAGAAATCCAAAGG
EY916905       <-- TCCCAGCAGTAGAAACGGATCTTGCCACAGTTTGTGAAGAAATCCAAAGG
EX755926       <-- TCCCAGCAGTAGAAACGGATCTTGCCACAGTTTGTGAAGAAATCCAAAGG
FD540648       <-- TCCCAGCAGTAGAAACGGATCTTGCCACAGTTTGTGAAGAAATCCAAAGG
EX755831       <-- TCCCAGCAGTAGAAACGGATCTTGCCACAGTTTGTGAAGAAATCCAAAGG
EY908518       <-- TCCCAGCAGTAGAAACGGATCTTGCCACAGTTTGTGAAGAAATCCAAAGG
EX757170       <-- TCCCAGCAGTAGAAACGGATCTTGCCACAGTTTGTGAAGAAATCCAAAGG
FD541031       <-- TCCCAGCAGTAGAAACGGATCTTGCCACAGTTTGTGAAGAAATCCAAAGG
EY925955       --> TCCCAGCAATAGAAACGGATCTTGCCACAGTTTGTGAAGAAATCCAAAGG
EY904197       --> TCCCAGCAGTAGAAACGGATCTTGCCACAGTTTGTGAAGAAA........
EV532965       --> ..................................................
FD537101       --> TCCCAGCAGTAGAAACGGATCTTGCCACAGTTTGTGAAGAAATCCAAAGG
EX760817       --> TCCCAGCAGTAGAAACGGATCTTGCCACAGTTTGTGAAGAAATCCAAAGG
EV543041       --> TCCCAGCAGTAGAAACGGATCTTGCCACAGTTTGTGAAGAAATCCAAAGG
EV532424       --> TCCCAGCAGTAGAAACGGATCTTGCCACAGTTTGTGAAGAAATCCAAAGG
EX759811       --> TCCCAGCAGTAGAAACGGATCTTGCCACAGTTTGTGAAGAAATCCAAAGG
EY912503       --> TCCCAGCAGTAGAAACGGATCTTGCCA.......................
EV531891       --> ..................................................
EY926354       --> TCCCAGCAATAGAAACGGATCTTGCCACAGTTTGTGAGGAAATCCAAA..
FD537408       --> TCCCAGCAGTAGAAACGGATCTTGCCACAGTTTGTGAAGAAATCCAAAGG

               901    -    951
UN23082        --> ATGAACCTCCACACCAATGGTAGGTTCATACTTCTTCTCAAACTCTCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY939160       <-- ..................................................
FD557397       <-- ..................................................
EV528427       <-- ATGAACCTCCACACCAATGGTAGGTTCATACTTCTTCTCAAACTCTCCAG
FD540838       <-- ATGAACCTCCACACCAATGGTAGGTTCATACTTCTTCTCAAACTCTCCAG
EV539192       <-- ATGAACCTCCACACCAATGGTAGGTTCATACTTCTTCTCAAACTCTCCAG
FD568450       <-- ATGAACCTCCACACCAATGGTAGGTTCATACTTCTTCTCAAACTCTCCAG
EY916905       <-- ATGAACCTCCACACCAATGGTAGGTTCATACTTCTTCTCAAACTCCCCAG
EX755926       <-- ATGAACCTCCACACCAATGGTAGGTTCATACTTCTTCTCAAACTCTCCAG
FD540648       <-- ATGAACCTCCACACCAATGGTAGGTTCATACTTCTTCTCAAACTCTCCAG
EX755831       <-- ATGAACCTCCACACCAATGGTAGGTTCATACTTCTTCTCAAACTCTCCAG
EY908518       <-- ATGAACCTCCACACCAATGGTAGGTTCATACTTCTTCTCAAACTCTCCAG
EX757170       <-- ATGAACCTCCACACCAATGGTAGGTTCATACTTCTTCTCAAACTCTCCAG
FD541031       <-- ATGAACCTCCACACCAATGGTAGGTTCATACTTCTTCTCAAACTCTCCAG
EY925955       --> ATGAACCTC-ACACCAATGGTAGGTTCg......................
EY904197       --> ..................................................
EV532965       --> ..................................................
FD537101       --> ATGAACCTCCACACCAATGGTAGGTTCATACTTCTTCTCAA-CTCTCCAG
EX760817       --> ATGAACCTCCACACCAATG...............................
EV543041       --> ATGAACCTCCACACCAATGGTAGGTTCATACTTCTTCTCAAACTCTCCAG
EV532424       --> ATGAACCTCCACACCAATGGTAGGTTCATACTTCTTCTCAAACTCTCCAG
EX759811       --> ATGAACCTCCACACCAATGGTAGGTTCATACTTCTTCTCAAACTCTCCAG
EY912503       --> ..................................................
EV531891       --> ..................................................
EY926354       --> ..................................................
FD537408       --> ATGAACCTCCACACC...................................

               951    -   1001
UN23082        --> TAAGATGTCTCTTGACGAAAGTGGTTTTCCCTGTGCCTCCGTCACCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY939160       <-- ..................................................
FD557397       <-- ..................................................
EV528427       <-- TAAGATc...........................................
FD540838       <-- TAAGATGTCTCTTcc...................................
EV539192       <-- TAAGATGTCTCTTGACGAAAGTGGTTTTCCCTGTGCCTCCGTCACCAACA
FD568450       <-- TAAGATGTCTCTTGACGAAAGTGGTTTTCCCTGTGCCTCCGTCACCAACA
EY916905       <-- TAAGATGTCTCTTGACAAAAGTGGTTTTCCCc..................
EX755926       <-- TAAGATGTCTCTTGACGAAAGTGGTTTTCCCTGTGCCTCCGTCACCAACA
FD540648       <-- TAAGATGTCTCTTGACGAAAGTGGTTTTCCCTGTGCCTCCGTCACCAACA
EX755831       <-- TAAGATGTCTCTTGACGAAAGTGGTTTTCCCTGTGCCTCCGTCACCAACA
EY908518       <-- TAAGATGTCTCTTGACGAAAGTGGTTTTCCCTGTGCCTCCGTCACCAACA
EX757170       <-- TAAGATGTCTCTTGACGAAAGTGGTTTTCCCTGTGCCTCCGTCACCAACA
FD541031       <-- TAAGATGTCTCTTGACGAAAGTGGTTTTCCCTGTGCCTCCGTCACCAACA
EY925955       --> ..................................................
EY904197       --> ..................................................
EV532965       --> ..................................................
FD537101       --> TAAGATGTCTCTTGACGAAAG.............................
EX760817       --> ..................................................
EV543041       --> TAAGATGTCTCTTGA...................................
EV532424       --> TAAGATc...........................................
EX759811       --> TAAGATGTCTCTTGACGAAAGTGGTTTT......................
EY912503       --> ..................................................
EV531891       --> ..................................................
EY926354       --> ..................................................
FD537408       --> ..................................................

               1001   -   1051
UN23082        --> ATGACGAGCTTGAAGCTAGGGTAATCGACGGTTTGCTGGTTTGGTAGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY939160       <-- ..................................................
FD557397       <-- ..................................................
EV528427       <-- ..................................................
FD540838       <-- ..................................................
EV539192       <-- ATGACGAGCTTGAAGCTAGGGTAATCGACGGTTTGCTGGTTTGGTAGAGC
FD568450       <-- ATGACGAGCTTGAAGCTAGGGTAGTCGACGGTTTGCTGGTTTGGTAGAGC
EY916905       <-- ..................................................
EX755926       <-- ATGACGAGCTTGAAGCTAGGGTAATCGACGGTTTGCTGGTTTGGTAGAGC
FD540648       <-- ATGACGAGCTTGAAGCTAGGGTAATCGACGGTTTGCTGGTTTGGTAGAGC
EX755831       <-- ATGACGAGCTTGAAGCTAGGGTAATCGACGGTTTGCTGGTTTGGTAGAGC
EY908518       <-- ATGACGAGCTTGAAGCTAGGGTAATCGACGGTTTGCTGGTTTGGTAGAGC
EX757170       <-- ATGACGAGCTTGAAGCTAGGGTAATCGACGGTTTGCTGGTTTGGTAGAGC
FD541031       <-- ATGACGAGCTTGAAGCTAGGGTAATCGACGGTTTGCTGGTTTGGTAGAGC
EY925955       --> ..................................................
EY904197       --> ..................................................
EV532965       --> ..................................................
FD537101       --> ..................................................
EX760817       --> ..................................................
EV543041       --> ..................................................
EV532424       --> ..................................................
EX759811       --> ..................................................
EY912503       --> ..................................................
EV531891       --> ..................................................
EY926354       --> ..................................................
FD537408       --> ..................................................

               1051   -   1101
UN23082        --> CATGTTTTCGGAGTCGCAGAGAATCAGACGACGTGAGCTTTTAGATAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY939160       <-- ..................................................
FD557397       <-- ..................................................
EV528427       <-- ..................................................
FD540838       <-- ..................................................
EV539192       <-- CATGTTTTCGGAGTCGCAGAGAATCAGACGACGTGAGCTTTTAGATAGTA
FD568450       <-- CATGTTTTCGGAGTCGCAGAGAATCAGACGACGTGAGCTTTTAGATAGTA
EY916905       <-- ..................................................
EX755926       <-- CATGTTTTCGGAGTCGCAGAGAATCAGACGACGTGAGCTTTTAGATAGTA
FD540648       <-- CATGTTTTCGGAGTCGCAGAGAATCAGACGACGTGAGCTTTTAGATAGTA
EX755831       <-- CATGTTTTCGGAGTCGCAGAGAATCAGACGACGTGAGCTTTTAGATAGTA
EY908518       <-- CATGTTTTCGGGGTCGCAGAGAATCAGACGACGTGAGCTTTTAGATAGTc
EX757170       <-- CATGTTTTCGGAGTCGCAGAGAATCAGACGACGTGAGCTTTTAGATAGTA
FD541031       <-- CATGTTTTCcc.......................................
EY925955       --> ..................................................
EY904197       --> ..................................................
EV532965       --> ..................................................
FD537101       --> ..................................................
EX760817       --> ..................................................
EV543041       --> ..................................................
EV532424       --> ..................................................
EX759811       --> ..................................................
EY912503       --> ..................................................
EV531891       --> ..................................................
EY926354       --> ..................................................
FD537408       --> ..................................................

               1101   -   1151
UN23082        --> ACAAGGAGAGAAGCCC
                   ~~~~~~~~~~~~~~~~
EY939160       <-- ................
FD557397       <-- ................
EV528427       <-- ................
FD540838       <-- ................
EV539192       <-- ACAAGGAGAGAcc...
FD568450       <-- ACAAGGAGAGAAGCCC
EY916905       <-- ................
EX755926       <-- ACcc............
FD540648       <-- ACAAGGAGAGcc....
EX755831       <-- ACcc............
EY908518       <-- c...............
EX757170       <-- ACAAGGAGcc......
FD541031       <-- ................
EY925955       --> ................
EY904197       --> ................
EV532965       --> ................
FD537101       --> ................
EX760817       --> ................
EV543041       --> ................
EV532424       --> ................
EX759811       --> ................
EY912503       --> ................
EV531891       --> ................
EY926354       --> ................
FD537408       --> ................