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Alignment for radish unigene UN23085

               1      -     51
UN23085        --> AGTCGTAGAAGAAACTGTCGATATCAATAATGACGAAAGAGTCCAAAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566424       <-- ..................................................
EW723244       <-- ..................................................
FD534739       <-- ..................................................
EY940532       <-- ..................................................
FD988874       <-- ..................................................
EV525491       <-- ..................................................
FD533720       <-- ..................................................
EX748096       <-- ..................................................
EX749443       <-- ..................................................
EW717248       <-- ..................................................
FD978165       <-- ..................................................
EX890606       <-- ..................................................
FD962466       <-- ..................................................
FD569817       <-- ..................................................
EW725825       <-- ..................................................
EY901046       <-- ..................................................
FD988630       <-- ..................................................
EX888489       <-- ..................................................
EX752139       --> AGTCGTAGAAGAAACTGTCGATATCAATAATGACGAAAGAGTCCAAAGGT
EW721279       --> gGTCGTAGAAGAAACTGTCGATATCAATAATGACGAAAGAGTCCAAAGGT
EX753127       --> gGTCGTAGAAGAAACTGTCGATATCAATAATGACGAAAGAGTCCAAAGGT
EV530225       --> .......GAAGAAACTGTCGATATCAATAATGACGAAAGAGTCCAAAGGT
EV571560       --> ......cGAAGAAACTGTCGATATCAATAATGACGAAAGAGTCCAAAGGT
EX900351       --> ......gGAAGAAACTGTCGATATCAATAATGACGAAAGAGTCCAAAGGT
FD530584       --> .......ggAGAAACTGTCGATATCAATAATGACGAAAGAGTCCAAAGGT
FD529832       --> ...........AAACTGTCGATATCAATAATGACGAAAGAGTCCAAAGGT
EX768101       --> ......................ATCAATAATGACGAAAGAGTCCAAAGGT
EX892417       --> ...............................................GGT
FD984724       --> ..................................................
FD984500       --> ..................................................

               51     -    101
UN23085        --> TTCATGAGAAACTGCAACAAATTGCCCCTAGAGACACAATTCAAGGTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566424       <-- ..................................................
EW723244       <-- ..................................................
FD534739       <-- ..................................................
EY940532       <-- ..................................................
FD988874       <-- ..................................................
EV525491       <-- ..................................................
FD533720       <-- ..................................................
EX748096       <-- ..................................................
EX749443       <-- ..................................................
EW717248       <-- ..................................................
FD978165       <-- ..................................................
EX890606       <-- ..................................................
FD962466       <-- ..................................................
FD569817       <-- ..................................................
EW725825       <-- ..................................................
EY901046       <-- ..................................................
FD988630       <-- ..................................................
EX888489       <-- ..................................................
EX752139       --> TTCATGAGAAACTGCAACAAATTGCCCCTAGAGACACAATTCAAGGTCTT
EW721279       --> TTCATGAGAAACTGCAAAAAATTGCCCCTAGAGACACAATTCAAGGTCTT
EX753127       --> TTCATGAGAAACTGCAACAAATTGCCCCTAGAGACACAATTCAAGGTCTT
EV530225       --> TTCATGAGAAACTGCAACAAATTGCCCCTAGAGACACAATTCAAGGTCTT
EV571560       --> TTCATGAGAAACTGCAACAAATTGCCCCTAGAGACACAATTCAAGGTCTT
EX900351       --> TTCATGAGAAACTGCAACAAATTGCCCCTAGAGACACAATTCAAGGTCTT
FD530584       --> TTCATGAGAAACTGCAACAAATTTCCCCTAGAGACACAATTCAAGGTCTT
FD529832       --> TTCATGAGAAACTGCAACAAATTGCCCCTAGAGACACAATTCAAGGTCTT
EX768101       --> TTCATGAGAAACTGCAACAAATTGCCCCTAGAGACACAATTCAAGGTCTT
EX892417       --> TTCATGAGAAACTGCAACAAATTGCCCCTAGAGACACAATTCAAGGTCTT
FD984724       --> .................................................T
FD984500       --> ..................................................

               101    -    151
UN23085        --> ACAACAGAACACGACCAAACGTTGCATTAAACAAAAAAAA---CTAATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566424       <-- .............ACCAAACGTTGCATTAAACAAAAAAAA---CTAATT-
EW723244       <-- ......................................AA---CTAATTT
FD534739       <-- ..................................................
EY940532       <-- ..................................................
FD988874       <-- ..................................................
EV525491       <-- ..................................................
FD533720       <-- ..................................................
EX748096       <-- ..................................................
EX749443       <-- ..................................................
EW717248       <-- ..................................................
FD978165       <-- ..................................................
EX890606       <-- ..................................................
FD962466       <-- ..................................................
FD569817       <-- ..................................................
EW725825       <-- ..................................................
EY901046       <-- ..................................................
FD988630       <-- ..................................................
EX888489       <-- ..................................................
EX752139       --> ACAACAGAACACGACCAAACGTTGCATTAAACAAAAAAAA--ACTAATTT
EW721279       --> ACAACAGAACACGACCAAACGTTGCATTAAACAAAAAAAAAAACTAATTT
EX753127       --> ACAACAGAACACGACCAAACGTTGCATTAAACAAAAAAAA-AACTAATTT
EV530225       --> ACAACAGAACACGACCAAACGTTGCATTAAACAAAAAAAA---CTAATTT
EV571560       --> ACAACAGAACACGACCAAACGTTGCATTAAACAAAAAAAA--ACTAATTT
EX900351       --> ACAACAGAACACGACAAAACGTTGCATTAAACAAAAAAAA--ACTAATTT
FD530584       --> ACAACAGAACACGACCAAACGTTGCATTAAACAAAAAAAA-AACTAATTT
FD529832       --> ACAACAGAACACGACCAAACGTTGCATTAAACAAAAAAAA-AACTAATTT
EX768101       --> ACAACAGAACACGACCAAACGTTGCATTAAACAAAAAAAA---CTAATTT
EX892417       --> ACAACAGAACACGACCAAACGTTGCATTAAACAAAAAAAA---CTAATTT
FD984724       --> ACAACAGAACACGACCAAACGTTGCATTAAACAAAAAAAA--ACTAATTT
FD984500       --> ..................................................

               151    -    201
UN23085        --> GACCCATTTTTT-CTCAGTTTAGTCAGCATCCATCTCCTCGAGTGCAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566424       <-- GACCCATTTT-C-CTCAGTTTAGTCAGCATCCATCTCCTCGAGTGCAGTT  Raphanus raphanistrum subsp. landra
EW723244       <-- GACCCATTT--T-CTCAGTTTAGTCAGCATCCATCTCCTCGAGTGCAGTT  Raphanus sativus cv Early Scarlet Globe
FD534739       <-- ......TTTTTT-CTCAGTT-AGTCAGCATCCATCTCCTCGAGTGCAGTT  Raphanus raphanistrum subsp. maritimus
EY940532       <-- ......................................TCGAGTGCAGTT  Raphanus sativus cv Early Scarlet Globe
FD988874       <-- .........................................AGTGCAGTT  Raphanus raphanistrum subsp. landra
EV525491       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD533720       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX748096       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX749443       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW717248       <-- ..................................................  Raphanus sativus var. oleiformis
FD978165       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890606       <-- ..................................................  Raphanus sativus var. oleiformis
FD962466       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD569817       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW725825       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY901046       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD988630       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX888489       <-- ..................................................  Raphanus sativus var. oleiformis
EX752139       --> GACCCATTTTTT-CTCAGTTTAGTCAGCATCCATCTCCTCGAGTGCAGTT  Raphanus raphanistrum subsp. maritimus
EW721279       --> GACCCATTTTTC-CTCAGTTTAGTCAGCATCCATCTCCTCGAGTGCAGTT  Raphanus sativus var. oleiformis
EX753127       --> GACCCATTTTTT-CTCAGTTTAGTCAGCATCCATCTCCTCGAGTGCAGTT  Raphanus raphanistrum subsp. maritimus
EV530225       --> GACCCATTTTTT-CTCAGTTTAGTCAGCATCCATCTCCTCGAGTGCAGTT  Raphanus raphanistrum subsp. maritimus
EV571560       --> GACCCATTTTTC-CTCAGTTTAGTCAGCATCCATCTCCTCGAGTGCAGTT  Raphanus raphanistrum subsp. landra
EX900351       --> GACCCATTTTTC-CTCAGTTTAGTCAGCATCCATCTCCTCGAGTGCAGTT  Raphanus sativus cv Early Scarlet Globe
FD530584       --> GACCCATTTTTTTCTCAGTTTAGTCAGCATCCATCTCCTCGAGTGCAGTT  Raphanus raphanistrum subsp. maritimus
FD529832       --> GACCCATTTTTT-CTCAGTTTAGTCAGCATCCATCTCCTCGAGTGCAGTT  Raphanus raphanistrum subsp. maritimus
EX768101       --> GACCCATTTTTC-CTCAGTTTAGTCAGCATCCATCTCCTCGAGTGCAGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892417       --> GACCCATTTTTC-CTCAGTTTAGTCAGCATCCATCTCCTCGAGTGCAGTT  Raphanus sativus var. oleiformis
FD984724       --> GACCCATTTTTT-CTCAGTTTAGTCAGCATCCATCTCCTCGAGTGCAGTT  Raphanus raphanistrum subsp. landra
FD984500       --> ..................................................  Raphanus raphanistrum subsp. landra

               201    -    251
UN23085        --> TTAGCTGCCGTCTTTGCTTCTTCCAGAAGATCATCAGGGACCTTCTGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566424       <-- TTAGCTGC-GTCTTTGCTTCTTCCAGAAGATCATCAGGGACTTTCTGATG
EW723244       <-- TTAGCTGC-GTCTTTGCTTCTTCCAGAAGATCATCAGGGACGTTCTGATG
FD534739       <-- T-AGCTGC-GTCTTTGCT-CTTCCAGAAGATCATCAGGGAC-TTCTGATG
EY940532       <-- T-AGCTGC-GTCTTTGCT-CTT-CAG-AGATCATCAGGGACCT-CTGATG
FD988874       <-- T-AGCTGC-GTCTT-GCTTCT-CCAGAAGATCATCAGGGA--CTCTGATG
EV525491       <-- ............TTTGCTTCTTCCAGAAGATCATCAGGGACCTTCTGATG
FD533720       <-- ......................................ggaCTTCTGATG
EX748096       <-- .............................................TGATG
EX749443       <-- .............................................TGATG
EW717248       <-- ..............................................GATG
FD978165       <-- ..............................................GATG
EX890606       <-- ...............................................ATG
FD962466       <-- ................................................TG
FD569817       <-- ..................................................
EW725825       <-- ..................................................
EY901046       <-- ..................................................
FD988630       <-- ..................................................
EX888489       <-- ..................................................
EX752139       --> TTAGCTGCCGTCTTTGCTTCTTCCAGAAGATCATCAGGGACCTTCTGATG
EW721279       --> TTAGCTGCCGTCTTTGCTTCTTCCAGAAGATCATCAGGGACCTTCTGATG
EX753127       --> TTAGCTGCCGTCTTTGCTTCTTCCAGAAGATCATCAGGGACCTTCTGATG
EV530225       --> TTAGCTGCCGTCTTTGCTTCTTCCAGAAGATCATCAGGGACCTTCTGATG
EV571560       --> TTAGCTGCCGTCTTTGCTTCTTCCAGAAGATCATCAGGGACCTTCTGATG
EX900351       --> TTAGCTGCCGTCTTTGCTTCTTCCAGAAGATCATCAGGGACCTTCTGATG
FD530584       --> TTAGCTGCCGTCTTTGCTTCTTCCAGAAGATCATCAGGGACCTTCTGATG
FD529832       --> TTAGCTGCCGTCTTTGCTTCTTCCAGAAGATCATCAGGGACCTTCTGATG
EX768101       --> TTAGCTGCCGTCTTTGCTTCTTCCAGAAGATCATCAGGGACCTTCTGATG
EX892417       --> TTAGCTGCCGTCTTTGCTTCTTCCAGAAGATCATCAGGGACCTTCTGATG
FD984724       --> TTAGCTGCCGTCTTTGCTTCTTCCAAAAAATCATCAGGGACCTTCTGATG
FD984500       --> .................................TCAGGGACCTTCTGATG

               251    -    301
UN23085        --> CTCTCGTTTAGACTCCTCACATATCCAGCTCATCTCCAATTCAAATGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566424       <-- CTCTCGTTTAGACTCCTCACATATCCAGCTCATCTCCAATTCAAATGCCT
EW723244       <-- CTCTCGTTTAGACTCCTCACATATCCAGCTCATCTCCAATTCAAATGCCT
FD534739       <-- CTCTCGTTTAGACTCCTCACATATCCAGCTCATCTCCAATTCAAATGC-T
EY940532       <-- CTCTCTTTT-GACTCCTCACATATTCAGCTCATCTCCAATTCAAATGCCT
FD988874       <-- CTCTCGTTTAGACTC-TCACATATCCAGCTCATCTCCAATTCAAATGC-T
EV525491       <-- CTCTCGTTTAGACTCCTCACATATCCAGCTCATCTCCAATTCAAATGCCT
FD533720       <-- CTCTCGTTTAGACTCCTCACATATCCAGCTCATCTCCAATTCAAATGC-T
EX748096       <-- CTCTCGTTTAGACTCCTCACATATCCAGCTCATCTCCAATTCAAATGC-T
EX749443       <-- CTCTCGTTTAGACTCCTCACATATCCAGCTCATCTCCAATTCAAATGCCT
EW717248       <-- CTCTCGTT-AGACTC-TCACATATCCAGCTCATCTCCAATTCAAATGC-T
FD978165       <-- CTCTCGTTTAGACTC-TCACATATCCAGCTCATCTCCAATTCAAATGC-T
EX890606       <-- CTCTCGTTTAGACTCCTCACATATCCAGCTCATCTCCAATTCAAATGCCT
FD962466       <-- CTCTCGTTTAGACTCCTCACATATCCAGCTCATCTCCAATTCAAATGCCT
FD569817       <-- .....tTTTTGACTCCTCACATATCCAGCTCATCTCCAATTCAAATGCCT
EW725825       <-- .........AGACTCCTCACATATCCAGCTCATCTCCAATTCAAATG--C
EY901046       <-- ..................................................
FD988630       <-- ..................................................
EX888489       <-- ..................................................
EX752139       --> CTCTCGTTTAGACTCCTCACATATCCAGCTCATCTCCAATTCAAATGCCT
EW721279       --> CTCTCGTTTAGACTCCTCACATATCCAGCTCATCTCCAATTCAAATGCCT
EX753127       --> CTCTCGTTTAGACTCCTCACATATCCAGCTCATCTCCAATTCAAATGCCT
EV530225       --> CTCTCGTTTAGACTCCTCACATATCCAGCTCATCTCCAATTCAAATGCCT
EV571560       --> CTCTCGTTTAGACTCCTCACATATCCAGCTCATCTCCAATTCAAATGCCT
EX900351       --> CTCTCGTTTAGACTCCTCACATATCCAGCTCATCTCCAATTCAAATGCCT
FD530584       --> CTCTCGTTTAGACTCCTCACATATCCAGCTCATCTCCAATTCAAATGCCT
FD529832       --> CTCTCGTTTAGACTCCTCACATATCCAGCTCATCTCCAATTCAAATGCCT
EX768101       --> CTATCGTTTAGACTCCTCACATATCCAGCTCATCTCCAATTCAAATGCCT
EX892417       --> CTCTCGTTTAGACTCCTCACATATCCAGCTCATCTCCAATTCAAATGCCT
FD984724       --> CTCTCGTTTAGACTCCTCACATATCCAGCTCATCTCCAATTCAAATGCCT
FD984500       --> CTCTCGTTTAGACTCCTCACATATCCAGCTCATCTCCAATTCAAATGCCT

               301    -    351
UN23085        --> TGTCTTTGGCTTCATCATGTAGCTTGTAAATGATTTTCGCCACTTCAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566424       <-- TGTCTTTGGCTTCATCATGTAGCTTGTAAATGATTTTCGCCACTTCAATA
EW723244       <-- TGTCTTTGGCTTCATCATGTAGCTTGTAAATGATTTTCGCCACTTCAATA
FD534739       <-- TGTCTTTGGCTTCATCATGTAGCTTGTAAATGATTTTCGCCACTTCAATA
EY940532       <-- -GTCTTTGGCTTCATCATGTAGCTTGTAAATGATTTTCTCCACTTCAATA
FD988874       <-- TGTCTTTGGCTTCATCATGTAGCTTGTAAATGATTTTCGCCACTTCAATA
EV525491       <-- TGTCTTTGGCTTCATCATGTAGCTTGTAAATGATTTTCGCCACTTCAATA
FD533720       <-- TGTCTTTGGCTTCATCATGTAGCTTGTAAATGATTTTCGCCACTTCAATA
EX748096       <-- TGTCTTGGGCTTCATCATGTAGCTTGTAAATGATTTTCGCCACTTCAATA
EX749443       <-- TGTCTTTGGCTTCATCATGTAGCTTGTAAATGATTTTCGCCACTTCAATA
EW717248       <-- TGTCTTTGGCTTCATCATGTAGCTTGTAAATGATTTTCGCCACTTCAATA
FD978165       <-- TGTCTTTGGCTTCATCATGTAGCTTGTAAATGATTTTCGCCACTTCAATA
EX890606       <-- TGTCTTTGGCTTCATCATGTAGCTTGTAAATGATTTTCGCCACTTCAATA
FD962466       <-- TGTCTTTGGCTTCATCATGTAGCTTGTAAATGATTTTCGCCACTTCAATA
FD569817       <-- TGTCTTTGGCTTCATCATGTAGCTTGTAAATGATTTTCGCCACTTCAATA
EW725825       <-- TGTC-TTGGCTTCATCATGTAGCTTGTAAATGATTT-CGCCACTTCAATA
EY901046       <-- ..................................................
FD988630       <-- ..................................................
EX888489       <-- ..................................................
EX752139       --> TGTCTTGGGCTTCATCATGTAGCTTGTAAATGATTTTCGCCACTTCAATA
EW721279       --> TGTCTTTGGCTTCATCATGTAGCTTGTAAATGATTTTCGCCACTTCAATA
EX753127       --> TGTCTTTGGCTTCATCATGTAGCTTGTAAATGATTTTCGCCACTTCAATA
EV530225       --> TGTCTTTGGCTTCATCATGTAGCTTGTAAATGATTTTCGCCACTTCAATA
EV571560       --> TGTCTTTGGCTTCATCATGTAGCTTGTAAATGATTTTCGCCACTTCAATA
EX900351       --> TGTCTTTGGCTTCATCATGTAGCTTGTAAATGATTTTCGCCACTTCAATA
FD530584       --> TGTCTTTGGCTTCATCATGTAGCTTGTAAATGATTTTCGCCACTTCAATA
FD529832       --> TGTCTTTGGCTTCATCATGTAGCTTGTAAATGATTTTCGCCACTTCAATA
EX768101       --> TGTCTTTGGCTTCATCATGTAGCTTGTAAATGATTTTCGACACTTCAATA
EX892417       --> TGTCTTTGGCTTCATCATGTAGCTTGTAAATGATTTTCGCCACTTCAATA
FD984724       --> TGTCTTTGGCTTCATCATGTAGCTTGTAAATGATTTTCGCCACTTCAATA
FD984500       --> TGTCTTTGGCTTCATCATGTAGCTTGTAAATGATTTTCGCCACTTCAATA

               351    -    401
UN23085        --> ACGCCTTCTTTGCATGTCATCTCAGATAATTTCAGTTTCTCAATTTCCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566424       <-- ACGCCTTCTTTGCATGTCATCTCAGATAATTTCAGTTTCTCAATTTCCGT
EW723244       <-- ACGCCTTCTTTGCATGTCATCTCAGATAATTTCAGTTTCTCAATTTCCGT
FD534739       <-- ACGCTTTCTTTGCATGTCATCTCAGATAATTTCAGTTTCTCAATTTCCGT
EY940532       <-- ACGCTTTCTTTGCATGTCATCTCAGATAATTTCAGTTTCTCAATTTCCGT
FD988874       <-- ACGCCTTCTTTGCATGTCATCTCAGATAATTTCAGTTTCTCAATTTCCGT
EV525491       <-- ACGCCTTCTTTGCATGTCATCTCAGATAATTTCAGTTTCTCAATTTCCGT
FD533720       <-- ACGCCTTCTTTGCATGTCATCTCAGATAATTTCAGTTTCTCAATTTCCGT
EX748096       <-- ACGCCTTCTTTGCATGTCATCTCAGATAATTTCAGTTTCTCAATTTCCGT
EX749443       <-- ACGCCTTCTTTGCATGTCATCTCAGATAATTTCAGTTTCTCAATTTCCGT
EW717248       <-- ACGCCTTCTTTGCATGTCATCTCAGATAATTTCAGTTTCTCAATTTCCGT
FD978165       <-- ACGCCTTCTTTGCATGTCATCTCAGATAATTTCAGTTTCTCAATTTCCGT
EX890606       <-- ACGCTTTCTTTGCATGTCATCTCAGATAATTTCAGTTTCTCAATTTCCGT
FD962466       <-- ACGCCTTCTTTGCATGTCATCCCAGATAATTTCAGTTTCTCAATTTCCGT
FD569817       <-- ACGCCTTCTTTGCATGTCATCTCAGATAATTTCAGTTTCTCAATTTCCGT
EW725825       <-- ACGC-TTCTTTGCATGTCATCTCAGATAATTTCAGTTTCTCAATTTCCGT
EY901046       <-- ......TCTTTGCATGTCATCTCAGATAATTTCAGTTTCTCAATTTCCGT
FD988630       <-- .......CTTTGCATGTCATCTCAGATAATTTCAGTTTCTCAATTTCCGT
EX888489       <-- ..................................................
EX752139       --> ACGCCTTCTTTGCATGTCATCTCAGATAATTTCAGTTTCTCAATTTCCGT
EW721279       --> ACGCCTTCTTTGCATGTCATCTCAGATAATTTCAGTTTCTCAATTTCCGT
EX753127       --> ACGCCTTCTTTGCATGTCATCTCAGATAATTTCAGTTTCTCAATTTCCGT
EV530225       --> ACGCCTTCTTTGCATGTCATCTCAAATAATTTCAGTTTCTCAATTTCCGT
EV571560       --> ACGCCTTCTTTGCATGTCATCTCAAATAATTTCAGTTTCTCAATTTCCGT
EX900351       --> ACGCCTTCTTTGCATGTCATCTCAGATAATTTCAGTTTCTCAATTTCCGT
FD530584       --> ACGCCTTCTTTGCATGTCATCTCAGATAATTTCAGTTTCTCAATTTCCGT
FD529832       --> ACGCCTTCTTTGCATGTCATCTCAGATAATTTCAGTTTCTCAATTTCCGT
EX768101       --> ACGCCTTCTTTGCATGTCATCTCAGATAATTTCAGTTTCTCAATTTCCGT
EX892417       --> ACGCCTTCTTTGCATGTCATCTCAGATAATTTCAGTTTCTCAATTTCCGT
FD984724       --> ACGCCTTCTTTGCATGTCATCTCAAATAATTTCAGTTTCTCAATTTCCGT
FD984500       --> ACGCCTTCTTTGCATGTCATCTCAAATAATTTCAGTTTCTCAATTTCCGT

               401    -    451
UN23085        --> TTTAGCAGCTTGTTTGCCTTTACCAATGGCAGCACCAAAATATCTGTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566424       <-- TTTAGCAGCTAGTTTGCCTTTACCAATGGCAGCACCAAAATATCTGTGTG  Raphanus raphanistrum subsp. landra
EW723244       <-- TTTAGCAGCTTGTTTGCCTTTGCCAATCGCAGCACCAAAATATCTGTATG  Raphanus sativus cv Early Scarlet Globe
FD534739       <-- TTTAGCAGCTTGTTTGCCTTTACCAATGGCAGCACCAAAATATCTGTGTG  Raphanus raphanistrum subsp. maritimus
EY940532       <-- TTTAGCAGCTTGTTTGCCTTTGCCAATCGCAGCACCAAAATATCTGTATG  Raphanus sativus cv Early Scarlet Globe
FD988874       <-- TTTAGCAGCTTGTTTGCCTTTACCAATGGCAGCACCAAAATATCTGTGTG  Raphanus raphanistrum subsp. landra
EV525491       <-- TTTAGCAGCTTGTTTGCCTTTACCAATGGCAGCACCAAAATATCTGTGTG  Raphanus raphanistrum subsp. maritimus
FD533720       <-- TTTAGCAGCTTGTTTGCCTTTACCAATGGCAGCACCAAAATATCTGTGTG  Raphanus raphanistrum subsp. maritimus
EX748096       <-- TTTAGCAGCTTGTTTGCCTTTACCAATGGCAGCACCAAAATATCTGTGTG  Raphanus raphanistrum subsp. maritimus
EX749443       <-- TTTAGCAGCTTGTTTGCCTTTACCAATGGCAGCACCAAAATATCTGTGTG  Raphanus raphanistrum subsp. maritimus
EW717248       <-- TTTAGCAGCTTGTTTGCCTTTGCCAATCGCAGCACCAAAATATCTGTATG  Raphanus sativus var. oleiformis
FD978165       <-- TTTAGCAGCTTGTTTGCCTTTGCCAATCGCAGCACCAAAACATCTGTATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890606       <-- TTTAGCAACTTGTTTGCCTTTGCCAATCGCAGCACCAAAATATCTGTATG  Raphanus sativus var. oleiformis
FD962466       <-- TTTAGCAGCTTGTTTGCCTTTACCAATGGCAGCACCAAAATATCTGTGTG  Raphanus raphanistrum subsp. maritimus
FD569817       <-- TTTAGCAGCTTGTTTGCCTTTGCCAATCGCAGCACCAAAATATCTGTATG  Raphanus sativus cv Early Scarlet Globe
EW725825       <-- TTTAGCAGCTTGTTTGCCTTTGCCAATCGCAGCACCAAAATATCTGTATG  Raphanus sativus cv Early Scarlet Globe
EY901046       <-- TTTAGCAGCTTGTTTGCCTTTACCAATGGCAGCACCAAAATATCTGTGTG  Raphanus raphanistrum subsp. maritimus
FD988630       <-- TTTAGCAGCTTGTTTGCCCTTACCAATGGCAGCACCAAAATATCTGTGTG  Raphanus raphanistrum subsp. landra
EX888489       <-- ................................CACCAAAATATCTGTATG  Raphanus sativus var. oleiformis
EX752139       --> TTTAGCAGCTTGTTTGCCTTTACCAATGGCAGCACCAAAATATCTGTGTG  Raphanus raphanistrum subsp. maritimus
EW721279       --> TTTAGCAGCTTGTTTGCCTTTGCCAATCGCAGCACCAAAATATCTGTATG  Raphanus sativus var. oleiformis
EX753127       --> TTTAGCAGCTTGTTTGCCTTTACCAATGGCAGCACCAAAATATCTGTGTG  Raphanus raphanistrum subsp. maritimus
EV530225       --> TTTAGCAGCTTGTTTGCCTTTACCAATGGCAGCACCAAAATATCTGTGTG  Raphanus raphanistrum subsp. maritimus
EV571560       --> TTTAGCAGCTAGTTTGCCTTTACCAATGGCAGCACCAAAATATCTGTGTG  Raphanus raphanistrum subsp. landra
EX900351       --> TTTAGCAGCTTGTTTGCCTTTGCCAATCGCAGCACCAAAATATCTGTATG  Raphanus sativus cv Early Scarlet Globe
FD530584       --> TTTAGCAGCTTGTTTGCCTTTACCAATGGCAGCACCAAAATATCTGTGTG  Raphanus raphanistrum subsp. maritimus
FD529832       --> TTTAGCAGCTTGTTTGCCTTTACCAATGGCAGCACCAAAATATCTGTGTG  Raphanus raphanistrum subsp. maritimus
EX768101       --> TTTAGCAGCTTGTTTGCCTTTGCCAATCGCAGCACCAAAATATCTGTATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892417       --> TTTAGCAGCTTGTTTGCTTTTGCCAATCGCAGCACCAAAATATCTGTATG  Raphanus sativus var. oleiformis
FD984724       --> TTTAGCAGCTTGTTTGCCTTTACCAATGGCAGCACCAAAATATCTGTGTG  Raphanus raphanistrum subsp. landra
FD984500       --> TTTAGCAGCTTGTTTGCCCTTACCAATGGCAGCACCAAAATATCTGTGTG  Raphanus raphanistrum subsp. landra

               451    -    501
UN23085        --> ATATGCCCGGATGGCTCGATCATGTACAATTGAGGACCATCTTTATCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566424       <-- ATATGCCCG-ATGGCTCGATCATGTACAATTGAGGACCATCTTTATCATA  Raphanus raphanistrum subsp. landra
EW723244       <-- ATAT-CCCGGAAGGCTCAATCATGTACAATTGAGGTCCATCTTTATCATA  Raphanus sativus cv Early Scarlet Globe
FD534739       <-- ATATGCCCG-ATGGCTCGATCATGTACAATTGAGGACCATCTTTATCATA  Raphanus raphanistrum subsp. maritimus
EY940532       <-- ATATGCCCG-ATGGCTCGATCATGTACAATTGAGGACCGTCTTTATCGTA  Raphanus sativus cv Early Scarlet Globe
FD988874       <-- ATATGCCCG-ATGGCTCGATCATGTACAATTGAGGACCATCTTTATCATA  Raphanus raphanistrum subsp. landra
EV525491       <-- ATATGCCCG-ATGGCTCGATCATGTACAATTGAGGACCATCTTTATCATA  Raphanus raphanistrum subsp. maritimus
FD533720       <-- ATATGCCCG-ATGGCTCGATCATGTACAATTGAGGACCATCTTTATCATA  Raphanus raphanistrum subsp. maritimus
EX748096       <-- ATATGCCCG-ATGGCTCGATCATGTACAATTGAGGACCATCTTTATCATA  Raphanus raphanistrum subsp. maritimus
EX749443       <-- ATATGCCCG-ATGGCTCGATCATGTACAATTGAGGACCATCTTTATCATA  Raphanus raphanistrum subsp. maritimus
EW717248       <-- ATAT-CCCGGATGGCTCAATCATGTACAATTGAGGACCATCTTTATCATA  Raphanus sativus var. oleiformis
FD978165       <-- ATAT-CCCGGAAGGCTCAATCATGTACAATTGAGGTCAATCTTTATCATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890606       <-- ATAT-CCCGGATGGCTCAATCATGTACAATTGAGGACCATCTTTATCATA  Raphanus sativus var. oleiformis
FD962466       <-- ATATGCCCG-ATGGCTCGATCATGTACAATTGAGGACCATCTTTATCATA  Raphanus raphanistrum subsp. maritimus
FD569817       <-- ATATGCCCG-ATGGCTCGATCATGTACAATTGAGGACCATCTTTATCGTA  Raphanus sativus cv Early Scarlet Globe
EW725825       <-- ATAT-CCCGGAAGGCTCAATCATGTACAATTGAGGTCCATCTTTATCATA  Raphanus sativus cv Early Scarlet Globe
EY901046       <-- ATATGCCCG-ATGGCTCGATCATGTACAATTGAGGACCATCTTTATCATA  Raphanus raphanistrum subsp. maritimus
FD988630       <-- ATATGCCCG-ACGGCTCGATCATGTACAATTGAGGACCATCTTTATCATA  Raphanus raphanistrum subsp. landra
EX888489       <-- ATAT-CCCGGATGGCTCAATCATGTACAATTGAGGACCATCTTTATCATA  Raphanus sativus var. oleiformis
EX752139       --> ATATGCCCG-ATGGCTCGATCATGTACAATTGAGGACCATCTTTATCATA  Raphanus raphanistrum subsp. maritimus
EW721279       --> ATAT-CCCGGATGGCTCAATCATGTACAATTGAGGACCATCTTTATCATA  Raphanus sativus var. oleiformis
EX753127       --> ATATGCCCG-ATGGCTCGATCATGTACAATTGAGGACCATCTTTATCATA  Raphanus raphanistrum subsp. maritimus
EV530225       --> ATATGCCCG-ATGGCTCGATCATGTACAATTGAGGACCATCTTTATCATA  Raphanus raphanistrum subsp. maritimus
EV571560       --> ATATGCCCG-ATGGCTCGATCATGTACAATTGAGGACCATCTTTATCATA  Raphanus raphanistrum subsp. landra
EX900351       --> ATAT-CCCGGAAGGCTCAATCATGTACAATTGAGGTCCATCTTTATCATA  Raphanus sativus cv Early Scarlet Globe
FD530584       --> ATATGCCCG-ATGGCTCGATCATGTACAATTGAGGACCATCTTTATCATA  Raphanus raphanistrum subsp. maritimus
FD529832       --> ATATGCCCG-ATGGCTCGATCATGTACAATTGAGGACCATCTTTATCATA  Raphanus raphanistrum subsp. maritimus
EX768101       --> ATAT-CCCGGAAGGCTCAATCATGTACAATTGAGGTCCATCTTTATCATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892417       --> ATAT-CCCGGATGGCTCAATCATGTACAATTGAGGACCATCTTTATCATA  Raphanus sativus var. oleiformis
FD984724       --> ATATGCCCG-ATGGCTCGATCATGTACAATTGAGGACCATCTTTATCATA  Raphanus raphanistrum subsp. landra
FD984500       --> ATATGCCCG-ACGGCTCGATCATGTACAATTGAGGACCATCTTTATCATA  Raphanus raphanistrum subsp. landra

               501    -    551
UN23085        --> ACCACCAAGAATGACCCCACATCCAAAAGGCCTGAGCCACCAATAAAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566424       <-- ACCACCAAGAATGACCCCACATCCAAAAGGCCTGAGCCACCAATAAAGGG
EW723244       <-- ACCACCAAGAATGACCCCACATCCAAAAGGCCTGAGCCACCAATAAAGGG
FD534739       <-- ACCACCAAGAATGACCCCACATCCAAAAGGCCTGAGCCACCAATAAAGGG
EY940532       <-- ACCACCAAGAATGACCCCACATCCAAAAGGCCTGAGCCACCAATAAAGGG
FD988874       <-- ACCACCAAGAATGACCCCACATCCAAAAGGCCTGAGCCACCAATAAAGGG
EV525491       <-- ACCACCAAGAATGACCCCACATCCAAAAGGCCTGAGCCACCAATAAAGGG
FD533720       <-- ACCACCAAGAATGACCCCACATCCAAAAGGCCCGAGCCACCAATAAAGGG
EX748096       <-- ACCACCAAGAATGGCCCCACATCCAAAAGGCCTGAGCCACCAATAAAGGG
EX749443       <-- ACCACCAAGAATGACCCCACATCCAAAAGGCCTGAGCCACCGATAAAGGG
EW717248       <-- ACCACCAAGAATGACCCCACATCCAAAAGGCCTGAGCCACCAATAAAGGG
FD978165       <-- ACCACCAAGAATGACCCCACATCCAAAAGGCCTGAGCCACCAATAAAGGG
EX890606       <-- ACCACCAAGAATGACCCCACATCCAAAAGGCCTGAGCCACCAATAAAGGG
FD962466       <-- ACCACCAAGAATGACCCCACATCCAAAAGGCCTGAGCCACCAATAAAGGG
FD569817       <-- ACCACCAAGAATGACCCCACATCCAAAAGGCCTGAGCCACCAATAAAGGG
EW725825       <-- ACCACCAAGAATGACCCCACATCCAAAAGGCCTGAGCCACCAATAAAGGG
EY901046       <-- ACCACCAAGAATGACCCCACATCCAAAAGGCCTGAGCCACCAATAAAGGG
FD988630       <-- ACCACCAAGAATGACCCCACATCCAAAAGGCCTGAGCCACCAATAAAGGG
EX888489       <-- ACCACCAAGAATGACCCCACATCCAAAAGGCCTGAGCCACCAATAAAGGG
EX752139       --> ACCACCAAGAATGGCCCCACATCCAAAAGGCCTGAGCCACCAAT......
EW721279       --> ACCACCAAGAATGACCCCACATCCAAAAGGCCTGAGCCACCAATAAAGGG
EX753127       --> ACCACCAAGAATGACCCCACATCCAAAAGGCCTGAGCCACCGATAAAGGG
EV530225       --> ACCACCAAGAATGACCCCACATCCAAAAGGCCTGAGCCACCAATAAAGGG
EV571560       --> ACCACCAAGAATGACCCCACATCCAAAAGGCCTGAGCCACCAATAAAGGG
EX900351       --> ACCACCAAGAATGACCCCACATCCAAAAGGCCTGAGCCACCAATAAAGGG
FD530584       --> ACCACCAAGAATGACCCCACATCCAAAAGGCCTGAGCCACCAATAAAGGG
FD529832       --> ACCACCAAGAATGACCCCACATCCAAAAGGCCCGAGCCACCAATAAAGGG
EX768101       --> ACCACCAAGAATGACCCCACATCCAAAAGGCCTGAGCCACCAATAAAGGG
EX892417       --> ACCACCAAGAATGACCCCACATCCAAAAGGCCTGAGCCACCAATAAAGGG
FD984724       --> ACCACCAAGAATGACCCCACATCCAAAAGGCCTGAGCCACCAATAAAGGG
FD984500       --> ACCACCAAGAATGACCCCACATCCAAAAGGCCTGAGCCACCAATAAAGGG

               551    -    601
UN23085        --> TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCACTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566424       <-- TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCACTGGT
EW723244       <-- TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCACTGGT
FD534739       <-- TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCACTGGT
EY940532       <-- TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCACTGGT
FD988874       <-- TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCACTGGT
EV525491       <-- TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCGCTGGT
FD533720       <-- TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCACTGGT
EX748096       <-- TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCACTGGT
EX749443       <-- TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCACTGGT
EW717248       <-- TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCACTGGT
FD978165       <-- TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCACTGGT
EX890606       <-- TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCACTGGT
FD962466       <-- TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCACTGGT
FD569817       <-- TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCACTGGT
EW725825       <-- TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCACTGGT
EY901046       <-- TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCACTGGT
FD988630       <-- TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCACTGGT
EX888489       <-- TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCACTGGT
EX752139       --> ..................................................
EW721279       --> TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCACTGGT
EX753127       --> TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCACTGGT
EV530225       --> TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCGCTGGT
EV571560       --> TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCACTGGT
EX900351       --> TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCACTGGT
FD530584       --> TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCACTGGT
FD529832       --> TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCACTGGT
EX768101       --> TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCACTGGT
EX892417       --> TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCACTGGT
FD984724       --> TACACAAATGAACGTAGCTTGCAACACGCTCTGAAAGTTCCTTCACTGGT
FD984500       --> TACACAAATGAACGTAGCTTGCAACA........................

               601    -    651
UN23085        --> ACAGCGTCCCCATAAACACTTTCGTAACTTCTGGCTTCAGATTTGGCCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566424       <-- ACAGCGTCCCCATAAACACTTTCGTAACTTCTGGCTTCAGATTTGGCCCT
EW723244       <-- ACAGCGTCCCCATAAACACTTTCGTAACTTCTGGCTTCAGATTTGGCCCT
FD534739       <-- ACAGCGTCCCCATAAACACTTTCGTAACTTCTGGCTTCAGATTTGGCCCT
EY940532       <-- ACAGCGTCCCCATAAACACTTTCGTAACTTCTGGCTTCAGATTTGGCCCT
FD988874       <-- ACAGCGTCCCCATAAACACTTTCGTAACTTCTGGCTTCAGATTTGGCCCT
EV525491       <-- ACAGCGTCCCCATAAACACTTTCGTAACTTCTGGCTTCAGATTTGGCCCT
FD533720       <-- ACAGCGTCCCCATAAACACTTTCGTAACTTCTGGCTTCAGATTTGGCCCT
EX748096       <-- ACAGCGTCCCCATAAACACTTTCGTAACTTCTGGCTTCAGATTTGGCCCT
EX749443       <-- ACAGCGTCCCCATAAACACTTTCGTAACTTCTGGCTTCAGATTTG-CCCT
EW717248       <-- ACAGCGTCCCCATAAACACTTTCGTAACTTCTGGCTTCAGATTTGGCCCT
FD978165       <-- ACAGCGTCCCCATAAACACTTTCGTAACTTCTGGCTTCAGATTTGGCCCT
EX890606       <-- ACAGCGTCCCCATAAACACTTTCGTAACTTCTGGCTTCAGATTTGGCCCT
FD962466       <-- ACAGCGTCCCCATAAACACTTTCGTAACTTCTGGCTTCAGATTTGGCCCT
FD569817       <-- ACAGCGTCCCCATAAACACTTTCGTAACTTCTGGCTTCAGATTTGGCCCT
EW725825       <-- ACAGCGTCCCCATAAACACTTTCGTAACTTCTGGCTTCAGATTTGGCCCT
EY901046       <-- ACAGCGTTCCCATAAACACTTTCGTAACTTCTGGCTTCAGATTTGGCCCT
FD988630       <-- ACAGCGTCCCCATAAACACTTTCGTAACTTCTGGCTTCAGATTTGGCCCT
EX888489       <-- ACAGCGTCCCCATAAACACTTTCGTAACTTCTGGCTTCAGATTTGGCCCT
EX752139       --> ..................................................
EW721279       --> ACAGCGTCCCCATAAACACTTTCGTAACTTCTGGCTTCAGATTTGGCCCT
EX753127       --> ACAGCGTCCCCATAAACACTTTCGTAACTTCTGGCTTCAGATTTG-CCCT
EV530225       --> ACAGCGTCCCCATAAACACTTTCGTAACTTCTGGCTTCAGATTTGGCCCT
EV571560       --> ACAGCGTCCCCATAAACACTTTCGTAACTTCTGGCTTCAGATTTGGCCCT
EX900351       --> ACAGCGTCCCCATAAACACTTTCGTAACTTCTGGCTTCAGATTTGGCCCT
FD530584       --> ACAGCGTCCCCATAAACACTTTCGTAACTTCTGGCTTCAGATTTGGCCCT
FD529832       --> ACAGCGTCCCCATAAACACTTTCGTAACTTCTGGCTTCAGATTTGGCCCT
EX768101       --> ACAGCGTCCCCATAAACACTTTCATAACTTCTGGCTTCAGATTTGGCCCT
EX892417       --> ACAGCGTCCCCATAAACACTTTCGTAACTTCTGGCTTCAGATTTGGCCCT
FD984724       --> ACAGCGTCCCCATAAACACTTTCGTAACTTCTGGCTTCAGATTTGGCCCT
FD984500       --> ..................................................

               651    -    701
UN23085        --> TGCAACAATTTGCCTGCCATCAGCAGCAAGCCCAGCAACAGCCATGCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566424       <-- TGCAACAATTTGCCTGCCATCAGCAGCAAGCCCAGCAACAGCCATGCCAG  Raphanus raphanistrum subsp. landra
EW723244       <-- TGCAACAATTTGCCTGCCGTCAGCAGCAAGCCCAGCAACAGCCATGCCAG  Raphanus sativus cv Early Scarlet Globe
FD534739       <-- TGCAACAATTTGCCTGCCATCAGCAGCAAGCCCAGCAACAGCCATGCCAG  Raphanus raphanistrum subsp. maritimus
EY940532       <-- TGCAACAATTTGCCTGCCGTCAGCTGCAAGCCCAGCAACAGCCATGCCAG  Raphanus sativus cv Early Scarlet Globe
FD988874       <-- TGCAACAATTTGCCTGCCATCAGCAGCAAGCCCAGCAACAGCCATGCCAG  Raphanus raphanistrum subsp. landra
EV525491       <-- TGCAACAATTTGCCTGCCATCAGCAGCAAGCCCAGCAACAGCCATGCCAG  Raphanus raphanistrum subsp. maritimus
FD533720       <-- TGCAAAAATTTGCCTGCCATCAGCAGCAAGCCCAGCAACAGCCATGCCAG  Raphanus raphanistrum subsp. maritimus
EX748096       <-- TGCAACAATTTGCCTGCCATCAGCAGCGAGCCCAGCAACAGCCATGCCAG  Raphanus raphanistrum subsp. maritimus
EX749443       <-- TGCAACAATTTGCCCGCCATCAGCAGCAAGCCCAGCAACAGCCATGCCAG  Raphanus raphanistrum subsp. maritimus
EW717248       <-- TGCAACAATTTGCCTGCCGTCAGCAGCAAGCCCAGCAACAGCCATGCCAG  Raphanus sativus var. oleiformis
FD978165       <-- TGCAACAATTTGCCTGCCGTCAGCTGCAAGCCCAGCAACAGCCATGCCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890606       <-- TGCAACAATTTGCCTGCCGTCAGCAGCAAGCCCAGCAACAGCCATGCCAG  Raphanus sativus var. oleiformis
FD962466       <-- TGCAACAATTTGCCTGCCATCAGCAGCAAGCCCAGCAACAGCCATGCCAG  Raphanus raphanistrum subsp. maritimus
FD569817       <-- TGCAACAATTTGCCTGCCGTCAGCTGCAAGCCCAGCAACAGCCATGCCAG  Raphanus sativus cv Early Scarlet Globe
EW725825       <-- TGCAACAATTTGCCTGCCGTCAGCAGCAAGCCCAGCAACAGCCATGCCAG  Raphanus sativus cv Early Scarlet Globe
EY901046       <-- TGCAACAATTTGCCTGCCATCAGCAGCAAGCCCAGCAACAGCCATGCCAG  Raphanus raphanistrum subsp. maritimus
FD988630       <-- TGCAACAATTTGCCTGCCATCAGCAGCAAGCCCAGCAACAGCCATGCCAG  Raphanus raphanistrum subsp. landra
EX888489       <-- TGCAACAATTTGCCTGCCGTCAGCAGCAAGCCCAGCAACAGCCATGCCAG  Raphanus sativus var. oleiformis
EX752139       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW721279       --> TGCAACAATTTGCCTGCCGTCAGCAGCAAGCCCAGCAACAGCCATGCCAG  Raphanus sativus var. oleiformis
EX753127       --> TGCAACAATTTGCCCGCCATCAGCAGCAAGCCCAGCAACAGCCATGCCAG  Raphanus raphanistrum subsp. maritimus
EV530225       --> TGCAACAATTTGCCTGCCATCAGCAGCAAGCCCAGCAACAGCCATGCCAG  Raphanus raphanistrum subsp. maritimus
EV571560       --> TGCAACAATTTGCCTGCCATCAGCAGCAAGCCCAGCAACAGCCATGCCAG  Raphanus raphanistrum subsp. landra
EX900351       --> TGCAACAATTTGCCTGCCGTCAGCAGCAAGCCCAGCAACAGCCATGCCAG  Raphanus sativus cv Early Scarlet Globe
FD530584       --> TGCAACAATTTGCCTGCCATCAGCAGCAAGCCCAGCAACAGCCATGCCAG  Raphanus raphanistrum subsp. maritimus
FD529832       --> TGCAAAAATTTGCCTGCCATCAGCAGCAAGCCCAGCAACAGCCATGCCAG  Raphanus raphanistrum subsp. maritimus
EX768101       --> TGCAACAATTTGCCTGCCGTCAGCTGCAAGCCCAGCAACAGCCATGCCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892417       --> TGCAACAATTTGCCTGCCGTCAGCAGCAAGCCCAGCAACAGCCATGCCAG  Raphanus sativus var. oleiformis
FD984724       --> TGCAACAATTTGCCTGCCATCAGCAGCAAGCCCAGCAACAGCCATGCCAG  Raphanus raphanistrum subsp. landra
FD984500       --> ..................................................  Raphanus raphanistrum subsp. landra

               701    -    751
UN23085        --> CATGACGATGAACAGAATGGATTCTCCTGTTGGATCCTGGTAGCATCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566424       <-- CATGACGATGAACAGAATGGATTCTCCTGTTGGATCCTGGTAGCATCATC
EW723244       <-- CATGACGATGAACAGAATGGATTCTCCGGTTGGATCCTGGTAGCATCATC
FD534739       <-- CATGACGATGAACAGAATGGATTCTCCTGTTGGATCCTGGTAGCATCATC
EY940532       <-- CATGACGATGAACAGAATGGATTCTCCTGTTGGATCCTGGTAGCATCATC
FD988874       <-- CATGACGATGAACAGAATGGATTCTCCTGTTGGATCCTGGTAGCATCATC
EV525491       <-- CATGACGATGAACAGAATGGATTCTCCTGTTGGATCCTGGTAGCATCATC
FD533720       <-- CATGACGATGAACAGAATGGATTCTCCTGTTGGATCCTGGTAGCATCATC
EX748096       <-- CATGACGATGAACAGAATGGATTCTCCTGTTGGATCCTGGTAGCATCATC
EX749443       <-- CATGACGATGAACAGAATGGATTCTCCTGTTGGATCCTGGTAGCATCATC
EW717248       <-- CATGACGATGAACAGAATGGATTCTCCTGTTGGATCCTGGTAGCATCATC
FD978165       <-- CATGACGATGAACAGAATGGATTCTCCTGTTAGATCCTGGTAGCATCATC
EX890606       <-- CATGACGATGAACAGAATGGATTCTCCTGTTAGATCCTGGTAGCATCATC
FD962466       <-- CATGACGATGAACAGAATGGATTCTCCTGTTGGATCCTGGTAGCATCATC
FD569817       <-- CATGACGATGAACAGAATGGATTCTCCTGTTGGATCCTGGTAGCATCATC
EW725825       <-- CATGACGATGAACAGAATGGATTCTCCGGTTGGATCCTGGTAGCATCATC
EY901046       <-- CATGACGATGAACAGAATGGATTCTCCTGTTGGATCCTGGTAGCATCATC
FD988630       <-- CATGACGATGAACAGAATGGATTCTCCTGTTGGATCCTGGTAGCATCATC
EX888489       <-- CATGACGATGAACAGAATGGATTCTCCTGTTGGATCCTGGTAGCATCATC
EX752139       --> ..................................................
EW721279       --> CATGACGATGAACAGAATGGATTCTCCTGTTGGATCCTGGTAGCATCATC
EX753127       --> CATGACGATGAACAGAATGGATTCTCCTGTTGGATCCTGGTAGCATCATC
EV530225       --> CATGACGATGAACAGAATGGATTCTCCTGTTGGATCCTGGTAGCATCATC
EV571560       --> CATGACGATGAACAGAATGGATTCTCCTGTTGGATCCTGGTAGCATCATC
EX900351       --> CATGACGATGAACAGAATGGATTCTCCTGTTGGATCCTGGTAGCATCATC
FD530584       --> CATGACG...........................................
FD529832       --> CATGACGATGAACAGAATGGATTCTCCTGTTGGATCCTGGTAGCATCATC
EX768101       --> CATGACGATGAACAGAATGGATTCTCCTGTTAGATCCTGGTAGCATCATC
EX892417       --> CATGACGATGAACAGAATGGATTCTCCTGTTGGATCCTGGTAGCATCATC
FD984724       --> CATGACGATGAACAGAA.................................
FD984500       --> ..................................................

               751    -    801
UN23085        --> TTTGATGCTATAAGTTTCTCCACACCCATAACAATCCCGTCCTTGCACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566424       <-- TTTGATGCTATAAGTTTCTCCACACCCATAACAATCCCGTCCTTGCACTT
EW723244       <-- TTTGATGCTATTAGTTTCTCCACACCCATAACAATCCCGTCCTTGCACTT
FD534739       <-- TTTGATGCTATAAGTTTCTCCACACCCATAACAATCCCGTCCTTGCACTT
EY940532       <-- TTTGATGCTATAAGTTTCTCCACACCCATAACAATCCCGTCCTTGCACTT
FD988874       <-- TTTGATGCTATAAGTTTCTCCACACCCATAACAATCCCGTCCTTGCACTT
EV525491       <-- TTTGATGCTATAAGTTTCTCCACACCCATAACAATCCCGTCCTTGCACTT
FD533720       <-- TTTGATGCTATAAGTTTCTCCACACCCATAACAATCCCGTCCTTGCACTT
EX748096       <-- TTTGATGCTATAAGTTTCTCCACACCCATAACAATCCCGTCCTTGCACTT
EX749443       <-- TTTGATGCTATAAGTTTCTC-ACACCCATAACAATCCCGTCCTTGCACTT
EW717248       <-- TTTGATGCTATAAGTTTCTCCACACCCATAACAATCCCGTCCTTGCACTT
FD978165       <-- TTTGATGCTATAAGTTTCTCCACACCCATAACAATCCCGTCCTTGCACTT
EX890606       <-- TTTGATGCTATAAGTTTCTCCACACCCATAACAATCCCGTCCTTGCACTT
FD962466       <-- TTTGATGCTATAAGTTTCTCCACACCCATAACAATCCCGTCCTTGCACTT
FD569817       <-- TTTGATGCTATAAGTTTCTCCACACCCATAACAATCCCGTCCTTGCACTT
EW725825       <-- TTTGATGCTATTAGTTTCTCCACACCCATAACAATCCCGTCCTTGCACTT
EY901046       <-- TTTGATGCTATAAGTTTCTCCACACCCATAACAATCCCGTCCTTGCACTT
FD988630       <-- TTTGATGCTATAAGTTTCTCCACACCCATAACAATCCCGTCCTTGCACTT
EX888489       <-- TTTGATGCTATAAGTTTCTCCACACCCATAACAATCCCGTCCTTGCACTT
EX752139       --> ..................................................
EW721279       --> TTTGATGCTATAAGTTTCTCCACACCCATAACAATCCCGTCCTTGCACTT
EX753127       --> TTTGATGCTATAAGTTTCTC-ACACC-ATAACAATCCCGT..........
EV530225       --> TTTGATGCTATAAGTTTCTCCACACCCATAACAATCCCGTCCTTGCACTT
EV571560       --> TTTGATGCTATAAGTTTCTCCACACCCATAACAATCCCGTCCTTGCACTT
EX900351       --> TTTGATGCTATTAGTTTCTCCACACCCATAACAATCCCGTCCTTGCACTT
FD530584       --> ..................................................
FD529832       --> TTTGATGCTATAAGTTTCTCCACACCCATAACAATCCCGTCCTTGCACTT
EX768101       --> TTTGATGCTATAAGTTTCTCCACACCCATAACAATCCCGTCCTTGCACTT
EX892417       --> TTTGATGCTATAAGTTTCTCCACACCCATAACAATCCCGTCCTTGCACTT
FD984724       --> ..................................................
FD984500       --> ..................................................

               801    -    851
UN23085        --> GATTCCAACAACGGTTCCACTGTTGTCGACAGCTTTGGCGGCGTACTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566424       <-- GATTCCAACAACGGTTCCACTGTTGTCGACAGCTTTGGCGGCGTACTCGA
EW723244       <-- GATTCCAACAACGGTTCCACTGTTGTCGACAGCTTTGGCGGCGTACTCGA
FD534739       <-- GATTCCAACAACGGTTCCACTGTTGTCGACAGCTTTGGCGGCGTACTCGA
EY940532       <-- GATTCCAACAACGGTTCCACTGTTGTCGACAGCTTTGGCGGCGTACTCGA
FD988874       <-- GATTCCAACAACGGTTCCACTGTTGTCGACAGCTTTGGCGGCGTACTCGA
EV525491       <-- GATTCCAACAACGGTTCCACTGTTGTCGACAGCTTTGGCGGCGTACTCGA
FD533720       <-- GATTCCAACAACGGTTCCACTGTTGTCGACAGCTTTGGCGGCGTACTCGA
EX748096       <-- GATTCCA---ACGGTTCCACTGTTGTCGACAGCTTTGGCGGCGTACTCGA
EX749443       <-- GATTCCAACAACGGTTCCACTGTTGTCGACAGCTTTGGCGGCGTACTCGA
EW717248       <-- GATTCCAACAACGGTTCCACTGTTGTCGACAGCTTTGGCGGCGTACTCGA
FD978165       <-- GATTCCGACAACGGTTCCACTGTTGTCGACAGCTTTGGCGGCGTACTCGA
EX890606       <-- GATTCCAACAACGGTTCCACTGTTGTCGACAGCTTTGGCGGCGTACTCGA
FD962466       <-- GATTCCGACAACGGTc..................................
FD569817       <-- GATTCCAACAACGGTTCCACTGTTGTCGACAGCTTTGGCGGCGTACTCGA
EW725825       <-- GATTCCAACAACGGTTCCACTGTTGTCGACAGCTTTGGCGGCGTACTCGA
EY901046       <-- GATTCCAACAACGGTTCCACTGTTGTCGACAGCTTTGGCGGCGTACTCGA
FD988630       <-- GATTCCAACAACGGTTCCACTGTTGTCGACAGCTTTGGCGGCGTACTCGA
EX888489       <-- GATTCCAACAACGGTTCCACTGTTGTCGACAGCTTTGGCGGCGTACTCGA
EX752139       --> ..................................................
EW721279       --> GATCCCA-CA-CGGTTCCACTGTTGTCGACAGCTTTG-CG-CGTACTCGA
EX753127       --> ..................................................
EV530225       --> GATTCCAACAACGGTTCCACTGTTGTCGACAGCTTTGGCGGCGTACT...
EV571560       --> GATTCCAACAACGGTTCCACTGTTGT........................
EX900351       --> GATTC.............................................
FD530584       --> ..................................................
FD529832       --> GAT...............................................
EX768101       --> G.................................................
EX892417       --> GATTCCAACAACGGTTCCACTGTTGTCGACAGCTTTGGCGGCGTACTCGA
FD984724       --> ..................................................
FD984500       --> ..................................................

               851    -    901
UN23085        --> TCTGGAAAACCCGCCCATCGGGTGAGAAAGTCGTCACCGACAGATCGTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566424       <-- TCTGGAAAACCCGCCCATCGGGTGAGAAAGTCGTCACCGACAGATCGTAT
EW723244       <-- TCTGGAAAACACGCCCATCGGGTGAGAAAGTCGTCACCGACAGATCGTAT
FD534739       <-- TCTGGAAAACCCGCCCATCGGGTGAGAAAGTCGTCACCGACAGATCGTAT
EY940532       <-- TCTGGAAAACCCGCCCATCGGGTGAGAAAGTCGTCACCGACAGATCGTAT
FD988874       <-- TCTGGAAAACCCGCCCATCGGGTGAGAAAGTCGTCACCGAC.........
EV525491       <-- TCTGGAAAACCCGCCCATCGGGTGAGAAAGTCGTCACCGACAGATCGTAT
FD533720       <-- TCTGGAAAACCCGCCCATCGGGTGAGAAAGTCGTCACCGACAGATCGTAT
EX748096       <-- TCTGGAAAACCCGCCCATCGGGTGAGAAAGTCGTCACCGACAGATCGTAT
EX749443       <-- TCTGGAAAACCCGCCCATCGGGTGAGAAAGTCGTCACCGACAGATCGTAT
EW717248       <-- TCTGGAAAACCCGCCCATCGGGTGAGAAAGTCGTCACCGACAGATCGTAT
FD978165       <-- TCTGGAAAACCCGCCCATCGGGTGAGAAAGTCGTCACCGACAGATCGTAT
EX890606       <-- TCTGGAAAACACGCCCATCGGGTGAGAAAGTCGTCACCGACAGATCGTAT
FD962466       <-- ..................................................
FD569817       <-- TCTGGAAAACCCGCCCATCGGGTGAGAAAGTCGTCACCGACAGATCGTAT
EW725825       <-- TCTGGAAAACACGCCCATCGGGTGAGAAAGTCGTCACCGACAGATCGTAT
EY901046       <-- TCTGGAAAACCCGCCCATCGGGTGAGAAAGTCGTCACCGACAGATCGTAT
FD988630       <-- TCTGGAAAACCCGCCCATCGGGTGAGAAAGTCGTCACCGGCAGATCGTAT
EX888489       <-- TCTGGAAAACCCGCCCATCGGGTGAGAAAGTCGTCACCGACAGATCGTAT
EX752139       --> ..................................................
EW721279       --> TCTGGAAA--CCGCC-ATCGGGTGAGAA-GTCGTCACCGACAGATCGTAT
EX753127       --> ..................................................
EV530225       --> ..................................................
EV571560       --> ..................................................
EX900351       --> ..................................................
FD530584       --> ..................................................
FD529832       --> ..................................................
EX768101       --> ..................................................
EX892417       --> TCTGGAAA-CCCGCCCATCGGGTGAGAAAGTCGTCACCGACAGATCGTA.
FD984724       --> ..................................................
FD984500       --> ..................................................

               901    -    951
UN23085        --> CCAGTTCCAATGCTACTCATCTTTTCTT-TTTTTT-----AGTTTGATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566424       <-- CCAGTTCCAATGCTACTCATCTTTTCTT-TTTTTT---TTAGTTTGATTT  Raphanus raphanistrum subsp. landra
EW723244       <-- CCAGTTCCAATGCTACTCATCCTTTTTT-TTTCTT-----AGTTTGATTT  Raphanus sativus cv Early Scarlet Globe
FD534739       <-- CCAGTTCCAATGCCACTCATCCTCTCTT-TTCTTT-----AGTTTGATTT  Raphanus raphanistrum subsp. maritimus
EY940532       <-- CCAGTTCCAATGCTACTC................................  Raphanus sativus cv Early Scarlet Globe
FD988874       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV525491       <-- CCAGTTCCAATGCTACTCATCTTTTCTT-TTTTTT--TTTAGTTTGATTT  Raphanus raphanistrum subsp. maritimus
FD533720       <-- CCAGTTCCAATGCTACTCATCTTTTCTT-TTTTTTTTTTTAGTTTGATTT  Raphanus raphanistrum subsp. maritimus
EX748096       <-- CCAGTTCCAATGCTACTCATCTTTTCTT-TTTTTT-TTTTAGTTTGATTT  Raphanus raphanistrum subsp. maritimus
EX749443       <-- CCAGTTCCAATGCTACTCATCctctccc......................  Raphanus raphanistrum subsp. maritimus
EW717248       <-- CCAGTTCCAATGCTACTCATCTTCTCTT-TTCTTT-----AGTTTGATTT  Raphanus sativus var. oleiformis
FD978165       <-- CCAGTTCCAATGCTACTCATCCTCTCTT-TTCTTT-----AGTTTGATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890606       <-- CCAGTTCCAATGCTACTCATCTTCTCTT-TTCTTT-----AGTTTGATTT  Raphanus sativus var. oleiformis
FD962466       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD569817       <-- CCAGTTCCAATGCTACTCATCTTCTCTT-TTCTTT-----AGTTTGATTT  Raphanus sativus cv Early Scarlet Globe
EW725825       <-- CCAGTTCCAATGCTACTCATCCTTTTTT-TTTCTT-----AGTTTGATTT  Raphanus sativus cv Early Scarlet Globe
EY901046       <-- CCAGTTCCAATGCTACTCATCTTTTCTT-TTTTTTtttagtttttcc...  Raphanus raphanistrum subsp. maritimus
FD988630       <-- CCAGTTCCAATGCTACTCATCTTTTCTTCTTTTTT-----AGTTTGATTT  Raphanus raphanistrum subsp. landra
EX888489       <-- CCAGTTCCAATGCTACTCATCTTCTCTT-TTCTTT-----AGTTTGATTT  Raphanus sativus var. oleiformis
EX752139       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW721279       --> C-AGT--CA-TGCTACTCATCTc...........................  Raphanus sativus var. oleiformis
EX753127       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV530225       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV571560       --> ..................................................  Raphanus raphanistrum subsp. landra
EX900351       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD530584       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD529832       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX768101       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892417       --> ..................................................  Raphanus sativus var. oleiformis
FD984724       --> ..................................................  Raphanus raphanistrum subsp. landra
FD984500       --> ..................................................  Raphanus raphanistrum subsp. landra

               951    -   1001
UN23085        --> GAGCGAACTCGATTTGAGCAAGGATCGAATCGAACTTAGAATGGGTGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566424       <-- GAGCGAACTCcc......................................
EW723244       <-- GAGCGAACTCGATTTcc.................................
FD534739       <-- GAGCGAACTCcc......................................
EY940532       <-- ..................................................
FD988874       <-- ..................................................
EV525491       <-- GAGCcc............................................
FD533720       <-- GAGCGAACTCcc......................................
EX748096       <-- GAGCGAACTCcc......................................
EX749443       <-- ..................................................
EW717248       <-- GAGCGAACTCc.......................................
FD978165       <-- cc................................................
EX890606       <-- GAGCaaggatcgaatccc................................
FD962466       <-- ..................................................
FD569817       <-- GAGCGAACTCGATTTGAGCAAGGATCGAATCcc.................
EW725825       <-- GAGCGAACTCGATTTcc.................................
EY901046       <-- ..................................................
FD988630       <-- GAGCGAACTCGATTTcc.................................
EX888489       <-- GAGCGAACTCGATTTGAGCAAGGATCGAATCGAACTTAGAATGGGTGATT
EX752139       --> ..................................................
EW721279       --> ..................................................
EX753127       --> ..................................................
EV530225       --> ..................................................
EV571560       --> ..................................................
EX900351       --> ..................................................
FD530584       --> ..................................................
FD529832       --> ..................................................
EX768101       --> ..................................................
EX892417       --> ..................................................
FD984724       --> ..................................................
FD984500       --> ..................................................

               1001   -   1051
UN23085        --> TCTTTGTTTTCAAGTCAGAACCGAAGCCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566424       <-- ..............................
EW723244       <-- ..............................
FD534739       <-- ..............................
EY940532       <-- ..............................
FD988874       <-- ..............................
EV525491       <-- ..............................
FD533720       <-- ..............................
EX748096       <-- ..............................
EX749443       <-- ..............................
EW717248       <-- ..............................
FD978165       <-- ..............................
EX890606       <-- ..............................
FD962466       <-- ..............................
FD569817       <-- ..............................
EW725825       <-- ..............................
EY901046       <-- ..............................
FD988630       <-- ..............................
EX888489       <-- TCTTTGTTTTCAAGTCAGAACCGAAGCCCC
EX752139       --> ..............................
EW721279       --> ..............................
EX753127       --> ..............................
EV530225       --> ..............................
EV571560       --> ..............................
EX900351       --> ..............................
FD530584       --> ..............................
FD529832       --> ..............................
EX768101       --> ..............................
EX892417       --> ..............................
FD984724       --> ..............................
FD984500       --> ..............................