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Alignment for radish unigene UN23092

               1      -     51
UN23092        --> TTTTTCTCTCTCTCCGTCTCCGACGATGGCTACCGGTGACCAGAGCAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX907377       <-- .....CTCTCTCTCCGTCTCCGACGATGGCTACCGGTGACCAGAGCAAGA
EV531481       <-- ..................................................
EX777461       <-- ..................................................
EY942533       <-- ..................................................
FD574638       <-- ..................................................
EX892804       <-- ..................................................
FD950375       <-- ..................................................
FD555349       <-- ..................................................
EV546461       <-- ..................................................
FD546296       <-- ..................................................
EX888967       --> TTTTTCTCTCTCTCCGTCTCCGACGATGGCTACCGGTGACCAGAGCAAGA
EX903283       --> TTTTTCTCTCTCTCCGTCTCCGACGATGGCTACCGGTGACCAGAGCAAGA
FD550326       --> TTTTTCTCTCTCTCCGTCTCCGACGATGGCTACCGGTGACCAGAGCAAGA
FD954049       --> TTTTTCTCTCTCTCCGTCTCCGACGATGGCTACCGGTGACCAGAGCAAGA
FD570676       --> ..TTTTTCTCTCTCCGTCTCCGACGATGGCTACCGGTGACCAGAGCAAGA
FD954819       --> ...............GTCTCCGACGATGGCTACCGGTGACCAGAGCAAGA
FD559687       --> ..................................................
EY946437       --> ..................................................
EV527173       --> ..................................................
FD961845       --> ..................................................

               51     -    101
UN23092        --> AGAGAAAGCAGCGTTATCTCCCTCAGAATAGACCAGCTAAGAAGAAGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX907377       <-- AGAGGAAGCAGCGTTATCTCCCTCAGAATAGACCAGCTAAGAAGAAGGGA
EV531481       <-- ..................................................
EX777461       <-- ..................................................
EY942533       <-- ..................................................
FD574638       <-- ..................................................
EX892804       <-- ..................................................
FD950375       <-- ..................................................
FD555349       <-- ..................................................
EV546461       <-- ..................................................
FD546296       <-- ..................................................
EX888967       --> AGAGAAAGCAGCGTTATCTCCCTCAGAATAGACCAGCTAAGAAGAAGGGA
EX903283       --> AGAGGAAGCAGCGTTATCTCCCTCAGAATAGACCAGCTAAGAAGAAGGGA
FD550326       --> AGAGAAAGCAGCGTTATCTCCCTCAGAATAGGCCAGCGAAAAAGAAGGGA
FD954049       --> AGAGAAAGCAGCGTTATCTCCCTCAGAATAGGCCAGCGAAAAAGAAGGGA
FD570676       --> AGAGAAAGCAGCGTTATCTCCCTCAGAATAGGCCAGCGAAAAAGAAGGGA
FD954819       --> AGAGAAAGCAGCGTTATCTCCCTCAGAATAGACCAGCTAAGAAGAAGGGA
FD559687       --> ..................................................
EY946437       --> ..................................................
EV527173       --> ..................................................
FD961845       --> ..................................................

               101    -    151
UN23092        --> GCATACCCTTTGAAGCCAGGTGTGCAAGGTTTCTTCATCTCGTGCGATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX907377       <-- GCATACCCTTTGAAGCCAGGTGTACAAGGTTTCTTCATCTCGTGCGATGG
EV531481       <-- ..................................................
EX777461       <-- ..................................................
EY942533       <-- ..................................................
FD574638       <-- ..................................................
EX892804       <-- ..................................................
FD950375       <-- ..................................................
FD555349       <-- ..................................................
EV546461       <-- ..................................................
FD546296       <-- ..................................................
EX888967       --> GCATACCCTTTGAAGCCAGGTGTGCAAGGTTTCTTCATCTCGTGCGATGG
EX903283       --> GCATACCCTTTGAAGCCAGGTGTACAAGGTTTCTTCATCTCGTGCGATGG
FD550326       --> GCTTACCCTTTGAAGCCAGGTGTGCAAGGCTTCTTCATCTCGTGCGATGG
FD954049       --> GCTTACCCTTTGAAGCCAGGTGTGCAAGGTTTCTTCATCTCGTGCGATGG
FD570676       --> GCTTACCCTTTGAAGCCAGGTGTGCAAGGTTTCTTCATCTCGTGCGATGG
FD954819       --> GCATACCCTTTGAAGCCAGGTGTGCAAGGTTTCTTCATCTCGTGCGATGG
FD559687       --> ..................................................
EY946437       --> ..................................................
EV527173       --> ..................................................
FD961845       --> ..................................................

               151    -    201
UN23092        --> CGGACGCGAATACCAAGCTTCTCAGGAAGCTATTAACGTCATTGATTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX907377       <-- CGGACGCGAATACCAAGCTTCTCAGGAAGCTATTAACGTCATTGATTCCT
EV531481       <-- ..................................................
EX777461       <-- ..................................................
EY942533       <-- ..................................................
FD574638       <-- ..................................................
EX892804       <-- ..................................................
FD950375       <-- ..................................................
FD555349       <-- ..................................................
EV546461       <-- ..................................................
FD546296       <-- ..................................................
EX888967       --> CGGACGCGAATACCAAGCTTCTCAGGAAGCTATTAACGTCATTGATTCCT
EX903283       --> CGGACGCGAATACCAAGCTTCTCAGGAAGCTATTAACGTCATTGATTCCT
FD550326       --> CGGACGCGAATACCAAGCTTCTCAGGAAGCTATTAACGTCATTGATTCCT
FD954049       --> CGGACGCGAATACCAAGCTTCTCAGGAAGCTATTAACGTCATTGATTCCT
FD570676       --> CGGACGCGAATACCAAGCTTCTCAGGAAGCTATTAACGTCATTGATTCCT
FD954819       --> CGGACGCGAATACCAAGCTTCTCAGGAAGCTATTAACGTCATTGATTCCT
FD559687       --> ..................................................
EY946437       --> ..................................................
EV527173       --> ..................................................
FD961845       --> ..................................................

               201    -    251
UN23092        --> TTTTTGAGGAGCTAATACATGGGACTGGCTTGAAAATGAATTCTTCTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX907377       <-- TTTTTGAGGAGCTAATACATGGGACTGTCTTGAAAATGAATTCTTCTGGG
EV531481       <-- ..................................................
EX777461       <-- ..................................................
EY942533       <-- ..................................................
FD574638       <-- ..................................................
EX892804       <-- ..................................................
FD950375       <-- ..................................................
FD555349       <-- ..................................................
EV546461       <-- ..................................................
FD546296       <-- ..................................................
EX888967       --> TTTTTGAGGAGCTAATACATGGGACTGGCTTGAAAATGAATTCTTCTGGG
EX903283       --> TTTTTGAGGAGCTAATACATGGGACTGTCTTGAAAATGAATTCTTCTGGG
FD550326       --> TTTTTGAGGAGCTAATGCATGGGACTGGCTTGAAAATGAATTCTTCTGGG
FD954049       --> TTTT-GAGGAGCTAATACATGGGACTGGCTTGAAAATGAATTCTTCTGGG
FD570676       --> TTTTTGAGGAGCTAATACATGGGACTGGCTTGAAAATGAATTCTTCTGGG
FD954819       --> TTTTTGAGGAGCTAATACATGGGACTGGCTTGAAAATGAATTCTTCTGGG
FD559687       --> ...................gGGGACTGGCTTGAAAATGAATTCTTCTGGG
EY946437       --> ..................................................
EV527173       --> ..................................................
FD961845       --> ..................................................

               251    -    301
UN23092        --> GTGCTCGAGAACCCAATTAACAAAAAGGTTACGTTTTCCTATAGCGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX907377       <-- GTGCTCGAGAACCCAATTAACAAAAAGGTTACGTTTTCCTATAGCGAGGA
EV531481       <-- ..................................................
EX777461       <-- ..................................................
EY942533       <-- ..................................................
FD574638       <-- ..................................................
EX892804       <-- ..................................................
FD950375       <-- ..................................................
FD555349       <-- ..................................................
EV546461       <-- ..................................................
FD546296       <-- ..................................................
EX888967       --> GTGCTCGAGAACCCAATTAACAAAAAGGTTACGTTTTCCTATAGCGAGGA
EX903283       --> GTGCTCGAGAACCCAATTAACAAAAAGGTTACGTTTTCCTATAGCGAGGA
FD550326       --> GTGCTCGACAACCCAATTAACAAAAAGGTTACGTTTTCCTATAGCGAGGA
FD954049       --> GTGCTCGAGAACCCAATTAACAAAAAGGTTACGTTTTCCTATAGCGAGGA
FD570676       --> GTGCTCGAGAACCCAATTAACAAAAAGGTTACGTTTTCCTATAGCGAGGA
FD954819       --> GTGCTCGAGAACCCAATTAACAAAAAGGTTACGTTTTCCTATAGCGAGGA
FD559687       --> GTGCTCGAGAACCCAATTAACAAAAAGGTTACGTTTTCCTATAGCGAGGA
EY946437       --> ..................................................
EV527173       --> ..................................................
FD961845       --> ..................................................

               301    -    351
UN23092        --> TGAGGATGAAGAGGAAGAGGAAGATGATGATGATGACAAGGAAGAGGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX907377       <-- TGAGGATGAGGATGAAGAGGAAGATGATGAT---GACAAGGAAGAGGAGA
EV531481       <-- ..................................................
EX777461       <-- ..................................................
EY942533       <-- ..................................................
FD574638       <-- ..................................................
EX892804       <-- ..................................................
FD950375       <-- ..................................................
FD555349       <-- ..................................................
EV546461       <-- ..................................................
FD546296       <-- ..................................................
EX888967       --> TGAGGATGAAGAGGAAGAGGAAGAT--T-ATGATGACAAGGAAGAGGAAA
EX903283       --> TGAGGATGAGGATGAAGAGGAAGATGATGATGA---CAAGGAAGAGGAGA
FD550326       --> TGAGGATGAAGAGGAAGAGGAAGATGATGATGATGACAAGGAAGAGGAAA
FD954049       --> TGAGGATGAAGAGGAAGAGGAAGATGATGATGA---CAAGGAAGAGGAAA
FD570676       --> TGAGGATGAAGAGGAAGAGGAAGATGATGATGA---CAAGGAAGAGGAAA
FD954819       --> TGAGGATGAAGAGGAAGAGGAAGATGATGATGA---CAAGGAAGAGGAAA
FD559687       --> TGAGGATGAAGAGGAAGAGGAAGATGATGATGA---CAAGGAAGAGGAAA
EY946437       --> ...........................TGATGATGACAAGGAAGAGGAAA
EV527173       --> ..................................................
FD961845       --> ..................................................

               351    -    401
UN23092        --> ACAAAGAGGAGGCTGGTGGGGATAAGGAAGAAGTGAAAGAAGGCGGTAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX907377       <-- ACAAAGAGGAGGCTGGTGGGGATAAGGAAGAAGTGAAAGAAGGCGGTAAT
EV531481       <-- .................................................T
EX777461       <-- ..................................................
EY942533       <-- ..................................................
FD574638       <-- ..................................................
EX892804       <-- ..................................................
FD950375       <-- ..................................................
FD555349       <-- ..................................................
EV546461       <-- ..................................................
FD546296       <-- ..................................................
EX888967       --> ACAAAGAGGAGGCTGGTGGGGATAAGGAAGAAGTGAAAGAAGGCGGTATT
EX903283       --> ACAAAGAGGAGGCTGGTGGGGATAAGGAAGAAGTGAAAGAAGGCGGTAAT
FD550326       --> ACAAAGAGGAGGCTGGTGGGGATAAGGAAGAAGTGAAAGAAGGCGGTAAT
FD954049       --> ACAAAGAGGAGGCTGGTGGGGATAAGGAACAAGTGAAAGAGGGCGATAAT
FD570676       --> ACAAAGAGGAGGCTGGTGGGGATAAGGAACAAGTGAAAGAAGGCGATAAT
FD954819       --> ACAAAGAGGAGGCTGGTGGGGATAAGGAAGAAGTGAAAGAAGGCGGTATT
FD559687       --> ACAAAGAGGAGGCTGGTGGGGATAAGGAAGACGTGAAAGAAGGCGGTAAT
EY946437       --> ACAAAGAGGAGGCTGGTGGGGATAAGGAAGAAGTGAAAGAAGGCGGTATT
EV527173       --> .....GAGGAGGCTGGTGGGGATAAGGAAGAAGTGAAAGAAGGCGGTAAT
FD961845       --> ..................................................

               401    -    451
UN23092        --> GATCAAGTGGTTGAGACTGAGAAAGAATTAGCAAGCCAAGAAGGTTCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX907377       <-- GATCAAGTGGTTGAGACTGAGAAAGAATTAGCAAGCCAAGAAGGTTCATG
EV531481       <-- GATCAAGTGGTTGAGACTGAGAAAGAATTAGCAAGCCAAGAAGGTTCATC
EX777461       <-- .........................................gaggTCATC
EY942533       <-- ..................................................
FD574638       <-- ..................................................
EX892804       <-- ..................................................
FD950375       <-- ..................................................
FD555349       <-- ..................................................
EV546461       <-- ..................................................
FD546296       <-- ..................................................
EX888967       --> GATCAAGTGGTTGAGACTGAGAAAGAATTAGCAAGCCAAGAAGGTTCATG
EX903283       --> GATCAAGTGGTTGAGACTGAGAAAGAATTAGCAAGCCAAGAAGGTTCATG
FD550326       --> GATCAAGTGGTTGAGACTGAGAAAGAATTAGCAAGCCAAGAAGGTTCATG
FD954049       --> GATCAAGTGGTTGAGACTGAGAAAGAATTAGCAAGCCAAGAAGGTTCGTG
FD570676       --> GATCAAGTGGTTGAGACTGAGAAAGAATTAGCAAGCCAAGAAGGTTCATG
FD954819       --> GATCAAGTGGTTGAGACTGAGAAAGAATTAGCAAGCCAAGAAGGTTCATG
FD559687       --> GATCAAGTGGTTGAGACTGAGAAAGAATTAGCAAGCCAAGAAGGTTCATG
EY946437       --> GATCAAGTGGTTGAGACTGAGAAAGAATTAGCAAGCCAAGAAGGTTCATG
EV527173       --> GATCAAGTGGTTGAGACTGAGAAAGAATTAGCAAGCCAAGAAGGTTCATC
FD961845       --> ..................................................

               451    -    501
UN23092        --> TGATGTCAAACAGTTAGCAGAAACTGAGACTGAAAAGGA---AGAAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX907377       <-- TGATGTCAAACAGTTAGCAGAAAATGAGACTGAAAAGGA---CGAAGAAA
EV531481       <-- TGATGTCAAACAGTTAGCAGAAACTGAGACTGAAAAGGA---AGAAGAGA
EX777461       <-- TGATGTCAAACAGTTAGCAGAAACTGAGACTGAAA-GGA---AGA-GAGA
EY942533       <-- ..ATGTCAAACAGTTAGCAGAAACTGAGACTGAAA-GGA---AGAAGAGA
FD574638       <-- ...............................GAAAAGGA---AGAAGAGA
EX892804       <-- ............................................AAGAGA
FD950375       <-- ............................................AAGAGA
FD555349       <-- ...............................................AGA
EV546461       <-- ................................................GA
FD546296       <-- ..................................................
EX888967       --> TGATGTCAAACAGTTAGCAGAAACTGAGACTGAAAAGGA---AGAAGAGA
EX903283       --> TGATGTCAAACAGTTAGCAGAAAATGAGACTGAAAAGGA---CGAAGAAA
FD550326       --> TGATGTCAAACAGTTAGCAGACACTGAGACTGAAAAGGACGAAGAAGAGA
FD954049       --> TGATGTCAAACAGTTAGCAGAAACTGAGACTGAAAAGGA---AGAAGAGA
FD570676       --> TGATGTCAAACAGTTAGCAGAAACTGAGACTGAAAAGGA---AGAAGAGA
FD954819       --> TGATGTCAAACAGTTAGCAGAAACTGAGACTGAAAAGGA---AGAAGAGA
FD559687       --> TGATGTCAAACAGTTAGCAGAAACTGAGACTGAAAAGGA---AGAAGAGA
EY946437       --> TGATGTCAAACAGTTAGCAGAAACTGAGACTGAAAAGGA---AGAAGAGA
EV527173       --> TGATGTCAAACAGTTAGCAGAAACTGAGACTGAAAAGGA---AGAAGAGA
FD961845       --> ..................................................

               501    -    551
UN23092        --> AACAAAAGAATATTGTTGAAGAACCTCCAAAAAA-GAAGCCATGTGTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX907377       <-- AACAAAAGAATATTGTTGAAGAACCTCCAAAAAA-GAAGCCATGTGTGGA  Raphanus sativus cv Rat-Tail Radish #3870
EV531481       <-- AACAAAAGAATATTGTTGAAGAACCTCCAAAAAAAGAAGCCATGTGTGGA  Raphanus raphanistrum subsp. maritimus
EX777461       <-- A-CAAAAGAATATTGTTGAAGAACCTCCAAAAAA-GAAGCCATGTGTGGA  Raphanus raphanistrum subsp. landra
EY942533       <-- AACAAA-GAATATTGTTGAAGAACCTCCAAAAAA-GAAGCCATGTGTGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD574638       <-- AACAAAAGAATATTGTTGAAGAACCTCCAAAAAA-GAAGCCATGTGTGGA  Raphanus sativus cv Early Scarlet Globe
EX892804       <-- AACAAAAGAATATTGTTGAAGAACCTCCAAAAAA-GAAGCCATGTGTGGA  Raphanus sativus var. oleiformis
FD950375       <-- AACAAAAGAATATTGTTGAAGAACCTCCAAAAAAAGAAGCCATGTGTGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD555349       <-- AACAAA-GAATATTGTTGAAGAACCTCCAAAAA--GAAGCCATGTGTGGA  Raphanus raphanistrum subsp. landra
EV546461       <-- AACAAAAGAATATTGTTGAAGAACCTCCAAAAAA-GAAGCCATGTGTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546296       <-- ......AGAATAT-GTTGAAGAACCTCCAAAAAAAGAAGCCATGTGTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888967       --> AACAAAAGAATATTGTTGAAGAACCTCCAAAAAA-GAAGCCATGTGTGGA  Raphanus sativus var. oleiformis
EX903283       --> AACAAAAGAATATTGTTGAAGAACCTCCAAAAAA-GAAGCCATGTGTGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD550326       --> AACAAAAGAATATTGTTGAAGAACCTCCAAAAAAAGAAGCCATGTGTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD954049       --> AACAAAAGAATATTGTTGAAGAACCTCCAAAAAA-GAAGCCATGTGTGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD570676       --> AACAAAAGAATATTGTTGAAGAACCTCCAAAAAA-GAAGCCATGTGTGGA  Raphanus sativus cv Early Scarlet Globe
FD954819       --> AACAAAAGAATATTGTTGAAGAACCTCCAAAAAA-GAAGCCATGTGTGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD559687       --> AACAAAAGAATATTGTTGAAGAACCTCCAAAAAA-GAAGCCATGTGTGGA  Raphanus raphanistrum subsp. landra
EY946437       --> AACAAAAGAATATTGTTGAAGAACCTCCAAAAAA-GAAGCCATGTGTGGA  Raphanus sativus cv Rat-Tail Radish #3870
EV527173       --> AACAAAAGAATATTGTTGAAGAACCTCCAAAAAAAGAAGCCATGTGTGGA  Raphanus raphanistrum subsp. maritimus
FD961845       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               551    -    601
UN23092        --> AGAAGCATCAGCAAAAGTAAACGGAAATGCTGCAGAGAAGTCCATTGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX907377       <-- AGAAGCATCAGCAAAAGTAAACGGAAAT---GCAGAGAAGTCCATTGATA  Raphanus sativus cv Rat-Tail Radish #3870
EV531481       <-- AGAAGCATCAGCAAAAGTAAACGGAAATGCTGCAGAGAAGTCCATTGATA  Raphanus raphanistrum subsp. maritimus
EX777461       <-- AGAAGCATCAGCAAAAGTAAACGGAAATGCTGCAGAGAAGTCCATTGATA  Raphanus raphanistrum subsp. landra
EY942533       <-- AGAAGCATCAGCAAAAGTAAACGGAAAT---GCAGAGAAGTCCATTGATA  Raphanus sativus cv Rat-Tail Radish #3870
FD574638       <-- AGAAGCATCAACAAAAGTAAACGGAAAT---GCAGAGAAGTCCATTGATA  Raphanus sativus cv Early Scarlet Globe
EX892804       <-- AGAAGCATCAGCAAAAGTAAACGGAAAT---GCAGAGAAGTCCATTGATA  Raphanus sativus var. oleiformis
FD950375       <-- AGAAGCACCAGCAAAAGTAAACGGAAAT---GCAGAGAAGTCCATTGATA  Raphanus sativus cv Rat-Tail Radish #3870
FD555349       <-- AGAAGCATCAGCAAAAGTAAACGGAAAT---GCAGAGAAGTCCATTGATA  Raphanus raphanistrum subsp. landra
EV546461       <-- AGAAGCATCAGCAAAAGTAAACGGAAATGCTGCAGAGAAGTCCATTGATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546296       <-- AGAAGCATCAGCAAAAGTAAACGGAAATGCTGCAGAGAAGTCCATTGATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888967       --> AGAAGCATCAGCAAAAGTAAACGGAA----TGCAGAGAAGTCCATTGATA  Raphanus sativus var. oleiformis
EX903283       --> AGAAGCATCAGCAAAAGTAAACGGAAATGC---AGAGAAGTCCATTGATA  Raphanus sativus cv Rat-Tail Radish #3870
FD550326       --> AGAAGCATCAGCAAAAGTAAACGGAAATGCTGCAGAGAAGTCCATTGATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD954049       --> AGAAGCACCAGCAAAAGTAAACGGAAATGC---AGAGAAGTCCATTGATA  Raphanus sativus cv Rat-Tail Radish #3870
FD570676       --> AGAAGCATCAACAAAAGTAAACGGAAATGC---AGAGAAGTCCATTGATA  Raphanus sativus cv Early Scarlet Globe
FD954819       --> AGAAGCATCAGCAAAAGTAAACGGAAATGC---AGAGAAGTCCATTGATA  Raphanus sativus cv Rat-Tail Radish #3870
FD559687       --> AGAAGCATCAGCAAAAGTAAACGGAAATGC---AGAGAAGTCCATTGATA  Raphanus raphanistrum subsp. landra
EY946437       --> AGAAGCATCAGCAAAAGTAAACGGAAATGC---AGAGAAGTCCATTGATA  Raphanus sativus cv Rat-Tail Radish #3870
EV527173       --> AGAAGCATCAGCAAAAGTAAACGGAAATGCTGCAGAGAAGTCCATTGATA  Raphanus raphanistrum subsp. maritimus
FD961845       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN23092        --> AGCTTATTGATGCTGAACTAAAAGAGCTTGGTGACAAGAGCAAGAGACGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX907377       <-- AGCTTATTGATGCTGAACTAAAAGAGCTTGGTGACAAGAGCAAGAGACGG
EV531481       <-- AGCTTATTGATGCTGAACTAAAAGAGCTTGGTGACAAGAGCAAGAGACGG
EX777461       <-- AGCTTATTGATGCTGAACTAAAAGAGCTTGGTGACAAGAGCAAGAGACGG
EY942533       <-- AGCTTATTGATGCTGAACTAAAAGAGCTTGGTGACAAGAGCAAGAGACGG
FD574638       <-- AGCTTATTGATGCTGAACTAAAAGAGCTTGGTGACAAGAGCAAGAGACGG
EX892804       <-- AGCTTATTGATGCTGAACTAAAAGAGCTTGGTGACAAGAGCAAGAGACGG
FD950375       <-- AGCTTATTGATGCTGAACTAAAAGAGCTTGGTGACAAGAGCAAGAGACGG
FD555349       <-- AGCTTATTGATGCTGAACTAAAAGAGCTTGGTGACAAGAGCAAGAGACGG
EV546461       <-- AGCTTATTGATGCTGAACTAAAAGAGCTTGGTGACAAGAGCAAGAGACGG
FD546296       <-- AGCTTATTGATGCTGAACTAAAAGAGCTTGGTGACAAGAGCAAGAGACGG
EX888967       --> AGCTTATTGATGCTGAACTAAAAGAGCTTGGTGACAAGAGCAAGA.....
EX903283       --> AGCTTATTGATGCTGAACTAAAAGAGCTTGGTGACAAGAGCAAGA.....
FD550326       --> AG................................................
FD954049       --> AGCTTATTGATGCTGAACTA..............................
FD570676       --> AGCTTATTGATGCTGAACTAAAAGAGCTTGGTGACAAGAGCAAGA.....
FD954819       --> AGCTTATTGATGCTGAACTAAAAGAGCTTGGTGACAAGAGCAAGAGACAG
FD559687       --> AGCTTATTGATGCTGAACTAAAAGAGCTTGGTGACAAGAGCAAGAGACGG
EY946437       --> AGCTTATTGATGCTGAACTAAAAGAGCTTGGTGACAAGAGCAAGAGACGG
EV527173       --> AGCTTATTGATGCTGAACTAAAAGAGCTTGGTGACAAGAGCAAGAGACGG
FD961845       --> ..................................................

               651    -    701
UN23092        --> TTTATGAAGTTAGATCCTGGTTGCAACGGTATTGTCTTCATCCAAATGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX907377       <-- TTTATGAAGTTAGATCCTGGTTGCAACGGTATTGTCTTCATCCAAATGAA
EV531481       <-- TTTATGAAGTTAGATCCTGGTTGCAACGGTATTGTCTTCATCCAAATGAA
EX777461       <-- TTTATGAAGTTAGATCCTGGTTGCAACGGTATTGTCTTCATCCAAATGAA
EY942533       <-- TTTATGAAGTTAGATCCTGGTTGCAACGGTATTGTCTTCATCCAAATGAA
FD574638       <-- TTTATGAAGTTAGATCCTGGTTGCAACGGTATTGTCTTCATCCAAATGAA
EX892804       <-- TTTATGAAGTTAGATCCTGGTTGCAACGGTATTGTCTTCATCCAAATGAA
FD950375       <-- TTTATGAAGTTAGATCCTGGTTGCAACGGTATTGTCTTCATCCAAATGAA
FD555349       <-- TTTATGAAGTTAGATCCTGGTTTCAACGGTATTGTCTTCATCCAAATGAA
EV546461       <-- TTTATGAAGTTAGATCCTGGTTGCAACGGTATTGTCTTCATCCAAATGAA
FD546296       <-- TTTATGAAGTTAGATCCTGGTTGCAACGGTATTGTCTTCATCCAAATGAA
EX888967       --> ..................................................
EX903283       --> ..................................................
FD550326       --> ..................................................
FD954049       --> ..................................................
FD570676       --> ..................................................
FD954819       --> TTTATGAAGTTAGATCCTGGTTGCAACGGTATTGTCTT............
FD559687       --> TTTATGAAGTTAGATCCTGGTTTCAACGGTATTGTCTTCATCCAAATGAA
EY946437       --> TTTATGAAGTTAGATCCTGGTTGCAACGGTATTGTCTTCATCCAAATGAA
EV527173       --> TTTATGAAGTTAGATCCTGGTTGCAACGGTATTGTCTTCATCCAAATGAA
FD961845       --> ..................................................

               701    -    751
UN23092        --> AAGGAGAGATGGTGATCCAAGTCCCAAAGACATTGTACAGCATGCAATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX907377       <-- AAGGAGAGATGGTGATCCAAGTCCCAAAGACATTGTACAGCATGCAATGA
EV531481       <-- AAGGAGAGATGGTGATCCAAGTCCCAAAGACATTGTACAGCATGCAATGA
EX777461       <-- AAGGAGAGATGGTGATCCAAGTCCCAAAGACATTGTACAGCATGCAATGA
EY942533       <-- AAGGAGAGATGGTGATCCAAGTCCCAAAGACATTGTACAGCATGCAATGA
FD574638       <-- AAGGAGAGATGGTGATCCAAGTCCCAAAGACATTGTACAGCATGCAATGA
EX892804       <-- AAGGAGAGATGGTGATCCAAGTCCCAAAGACATTGTACAGCATGCAATGA
FD950375       <-- AAGGAGAGATGGTGATCCAAGTCCCAAAGACATTGTATAGCATGCAATGA
FD555349       <-- AAGGAGAGATGGTGATCCAAGTCCCAAAGACATTGTACAGAATGCAATGA
EV546461       <-- AAGGAGAGATGGTGATCCAAGTCCCAAAGACATTGTACAGCATGCAATGA
FD546296       <-- AAGGAGAGATGGTGATCCAAGTCCCAAAGACATTGTACAGCATGCAATGA
EX888967       --> ..................................................
EX903283       --> ..................................................
FD550326       --> ..................................................
FD954049       --> ..................................................
FD570676       --> ..................................................
FD954819       --> ..................................................
FD559687       --> AAGGAGAGATGGTGATCCAAGTCCCAAAGACATTGTACAGAATGCAATGA
EY946437       --> AAGGAGAGATGGTGATCCAAGTCCCAAAGACATTGTACAGCATGCAATGA
EV527173       --> AAGGAGAGATGGTGATCCAAGTCCCAAAGACATTGTACAGCATGCAATGA
FD961845       --> ..................................................

               751    -    801
UN23092        --> CTTCTGCTGCTGCAACAAAAAAACATATGTCAAGGTTCATCCTAAGAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX907377       <-- CTTCTGCTGCTGC.....................................
EV531481       <-- CTTCTGCTGCTGCAACAAAAAAACATATGTCAAGGTTCATCCTAAGAATT
EX777461       <-- CTTCTGCTGCTGCAACAAAAAAACATATGTCAAGGTTCATCCTAAGAATT
EY942533       <-- CTTCTGCTGCTGCAACAAAAAAACATATGTCAAGGTTCATCCTAAGAATT
FD574638       <-- CTTTTGCTGCTGCAACAAAAAAACATATGTCAAGGTTCATCCTAAGAATT
EX892804       <-- CTTCTGCTGCTGCAACAAAAAAACATATGTCAAGGTTCATCCTAAGAATT
FD950375       <-- CTTCTGCTGCTGCAACAAAAAAACATATGTCAAGGTTCATCCTAAGAATT
FD555349       <-- CTTCTGCTGCTGCAACAAAAAAACATATGTCAAGGTTCATCCTAAGAATT
EV546461       <-- CTTCTGCTGCTGCAGCAAAAAA-CATATGTCAAGGTTCATCCTAAGAATT
FD546296       <-- CTTCTGCTGCTGCAACAAAAAAACATATGTCAAGGTTCATCCTAAGAATT
EX888967       --> ..................................................
EX903283       --> ..................................................
FD550326       --> ..................................................
FD954049       --> ..................................................
FD570676       --> ..................................................
FD954819       --> ..................................................
FD559687       --> CTTCTGCTGCTGCAACAAAAAAACATATGTCAAGGTTCATCCTAAGAATT
EY946437       --> CTTCTGCTGCTGCAACAAAAAAACATATGTCAAGGTTCATCCTAAGAATT
EV527173       --> CTTCTGCTGCTGCAACAAAAAAACATATGTCAAGGTTCATCCTAAGAATT
FD961845       --> .........................gATGTCAAGGTTCATCCTAAGAATT

               801    -    851
UN23092        --> TTACCAATTGAAGTGGCGTGTTACCCTTCGGAGGAAGAGATTTCAAGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX907377       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV531481       <-- TTACCAATTGAAGTGGCGTTTTACCCTTCGGAGGAAGAGATTTCAAGAGC  Raphanus raphanistrum subsp. maritimus
EX777461       <-- TTACCAATTGAAGTGGCGTGTTATCCTTCAGAGGAAGAGATTACAAGAGT  Raphanus raphanistrum subsp. landra
EY942533       <-- TTACCAATTGAAGTGGCGTGTTACCCTTCAGAGGAAGAGATTTCAAGAGC  Raphanus sativus cv Rat-Tail Radish #3870
FD574638       <-- TTACCAATTGAAGTGGCGTGTTACCCTTCGGAGGAAGAAATTTCAAGAGC  Raphanus sativus cv Early Scarlet Globe
EX892804       <-- TTACCAATTGAAGTGGCGTGTTACCCTTCAGAGGAAGAGATTTCAAGAGC  Raphanus sativus var. oleiformis
FD950375       <-- TTACCAATTGAAGTGGCGTGTTACCCTTCGGAGGAAGAAATTTCAAGAGC  Raphanus sativus cv Rat-Tail Radish #3870
FD555349       <-- TTACCAATTGAAGTGGCGTGTTACCCTTCGGAGGAAGAAATTTCAAGAGC  Raphanus raphanistrum subsp. landra
EV546461       <-- TTACCAATTGAAGTGGCGTGTTACCCTTCGGAGGAAGAAATTTCAAGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546296       <-- TTACCAATTGAAGTGGCGTGTTACCCTTCGGAGGAAGAAATTTCAAGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888967       --> ..................................................  Raphanus sativus var. oleiformis
EX903283       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD550326       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD954049       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD570676       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD954819       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD559687       --> TTACCAATTGAAGTGGCGTGTTACCCTTCGGAGGAAGAAATTTCAAGAGC  Raphanus raphanistrum subsp. landra
EY946437       --> TTACCAATTGAAGTGGCGTGTTACCCTTCAGAGGAAGAGATTTCAAGAGC  Raphanus sativus cv Rat-Tail Radish #3870
EV527173       --> TTACCAATTGAAGTGGCGTTTTACCCTTCGGAGGAAGAGATTTCAAGAGC  Raphanus raphanistrum subsp. maritimus
FD961845       --> TTACCAATTGAAGTGGCGTGTTACCCTTCGGAGGAAGAGATTTCAAGAGC  Raphanus raphanistrum subsp. maritimus

               851    -    901
UN23092        --> CATCAAGCCTCTTGTAGAACAGTATTTTCCCGTTGAGACTGATAACCCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX907377       <-- ..................................................
EV531481       <-- CATCAAGCCTCTTGTAGAACAGTATTTTCCCGTTGAGACTGATAACCCCC
EX777461       <-- CATCAAGCCTCTTGTAGAACAGTATTTTCCCGTTGAGACTGATAACCCCC
EY942533       <-- TATCAAACCTCTTGTAGAACAGTATTTTCCCGTTGAGACTGATAACCCCC
FD574638       <-- CATCAAGCCTCTTGTAGAACAGTATTTTCCCGTTGAGACTGATAACCCCC
EX892804       <-- TATCAAACCTCTTGTAGAACAGTATTTTCCCGTTGAGACTGATAACCCCC
FD950375       <-- CATCAAGCCTCTTGTAGAACAGTATTTTCCCGTTGAGACTGATAACCCCC
FD555349       <-- CATCAAGCCTCTTGTAGAACAGTATTTTCCCGTTGAGACTGATAACCCCC
EV546461       <-- CATCAAGCCTCTTGTAGAACAGTATTTTCCCGTTGAGACTGATAACCCCC
FD546296       <-- CATCAAGCCTCTTGTAGAACAGTATTTTCCCGTTGAGACTGATAACCCCC
EX888967       --> ..................................................
EX903283       --> ..................................................
FD550326       --> ..................................................
FD954049       --> ..................................................
FD570676       --> ..................................................
FD954819       --> ..................................................
FD559687       --> CATCAAGCCTCTTGTAGAACAGTATTTTCCCGTTGAGACTGATAACCCCC
EY946437       --> TATCAAACCTCTTGTAGAACAGTATTTTCCCGTTGAGACTGATAACCCCC
EV527173       --> CATCAAGCCTCTTGTAGAACAGTATTTTCCCGTTGAGACTGATAACCCCC
FD961845       --> CATCAAGCCTCTTGTAGAACAGTATTTTCCCGTTGAGACTGATAACCCCC

               901    -    951
UN23092        --> GGAAATTTGCTGTGTTGTATGGAGCACGTGCAAACACAGGCCTTGATAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX907377       <-- ..................................................
EV531481       <-- GGAAATTTGCTGTGTTGTATGGAGCACGTGCAAACACAGGCCTTGATAGG
EX777461       <-- GGAAATTTGCTGTGTTGTATGGAGCACGTGCAAACACAGGCCTTGATAGG
EY942533       <-- GGAAATTTGCTGTGTTGTATGGAGCACGTGCAAACACCGGCCTTGATAGG
FD574638       <-- GGAAATTTGCTGTGTTGTATGGAGCACGTGCAAACACAGGCCTTGATAGG
EX892804       <-- GGAAATTTGCTGTGTTGTATGGAGCACGTGCAAACACCGGCCTTGATAGG
FD950375       <-- GGAAATTTGCTGTGTTGTATGGAGCACGTGCAAACACAGGCCTTGATAGG
FD555349       <-- GGAAATTTGCTGTGTTGTATGGAGCACGTGCAAACACAGGCCTTGATAGG
EV546461       <-- GGAAATTTGCTGTGTTGTATGGAGCACGTGCAAACACAGGCCTTGATAGG
FD546296       <-- GGAAATTTGCTGTGTTGTATGGAGCACGTGCAAACACGGGCCTTGATAGG
EX888967       --> ..................................................
EX903283       --> ..................................................
FD550326       --> ..................................................
FD954049       --> ..................................................
FD570676       --> ..................................................
FD954819       --> ..................................................
FD559687       --> GGAAATTTGCTGTGTTGTATGGAGCACGTGCAAAC...............
EY946437       --> GGAAATTTGCTGTGTTGTATGGAGCACGTGCAAACACCGGCCTTGATAGG
EV527173       --> GGAAATTTGCTGTGTTGTATGGAGCACGTGCAAACACAGGCCTTGATAGG
FD961845       --> GGAAATTTGCTGTGTTGTATGGAGCACGTGCAAACACAGGCCTTGATAGG

               951    -   1001
UN23092        --> ATGAAAATAATAAACACGGTTGCTAAATCTGTTCCTGCCCCTCACAAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX907377       <-- ..................................................
EV531481       <-- ATGAAAATAATAAACACAGTTGCTAAATCTGTTCCTGCCCCTCACAAAGT
EX777461       <-- ATGAAAATAATAAACACGGTGGCGAAATCTGTTCCTGCCCCTCACAAAGT
EY942533       <-- ATGAAAATAATAAACACGGTTGCTAAATCTGTTCCTGCCCCTCACAAAGT
FD574638       <-- ATGAAAATAATAAACACGGTTGCTAAATCTGTTCCTGCCCCTCACAAAGT
EX892804       <-- ATGAAAATAATAAACACGGTTGCTAAATCTGTTCCTGCCCCTCACAAAGT
FD950375       <-- ATGAAAATAATAAACACGGTTGCTAAATCTGTTCCTGCCCCTCACAAAGT
FD555349       <-- ATGAAAATAATAAACACGGTTGCTAAATCTGTTCCTGCCCCTCACAAAGT
EV546461       <-- ATGAAAATAATAAACACGGTTGCTAAATCTGTTCCTGCCCCTCACAAAGT
FD546296       <-- ATGAAAATAATAAACACGGTGGCGAAATCTATTCCTGCCCCTCACAAAGT
EX888967       --> ..................................................
EX903283       --> ..................................................
FD550326       --> ..................................................
FD954049       --> ..................................................
FD570676       --> ..................................................
FD954819       --> ..................................................
FD559687       --> ..................................................
EY946437       --> ATGAAAATAATAAACACGGTTGCTAAATCTGTTCCTGCCCCTCACAAAGT
EV527173       --> ATGAAAATAATAAACACAGTTGCTAAATCTGTTCCTGCCCCTCACAAAGT
FD961845       --> ATGAAAATAATAAACACGGTTGCTAAATCTGTTCCTGCCCCTCACAAAGT

               1001   -   1051
UN23092        --> TGATTTGAACAACCCGGAGATGTCTATCGTGGTTGAAATTGTTAAGACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX907377       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV531481       <-- TGATTTGAACAACCCGGAGATGTCTATCGTGGTTGAAATTGTC----AAG  Raphanus raphanistrum subsp. maritimus
EX777461       <-- TGATTTGAACAACCCGGAGATGTCTATCGTGGTTGAAATTGTCAAGACAG  Raphanus raphanistrum subsp. landra
EY942533       <-- TGATTTGAACAACTCGGAGATGTCTATCGTGGTTGAAATTGTTAAGACAG  Raphanus sativus cv Rat-Tail Radish #3870
FD574638       <-- TGATTTGAACAACCCGGAGATGTCTATCGTGGTTGAAATTGTTAGGACAG  Raphanus sativus cv Early Scarlet Globe
EX892804       <-- TGATTTGAACAACCCGGAGATGTCTATCGTGGTTGAAATTGTTAAGACAG  Raphanus sativus var. oleiformis
FD950375       <-- TGATTTGAACAACCCGGAGATGTCTATCGTGGTTGAAATTGTTAAGACAG  Raphanus sativus cv Rat-Tail Radish #3870
FD555349       <-- TGATTTGAACAACCCGGAGATGTCTATCGTGGTTGAAATTGTTAAGACAG  Raphanus raphanistrum subsp. landra
EV546461       <-- TGATTTGAACAACCCGGAGATGTCTATCGTGGTTGAAATTGTTAAGACAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546296       <-- TGATTTGAACAACCCGGAGATGTCTATCGTGGTTGAAATTGTTAAGACAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888967       --> ..................................................  Raphanus sativus var. oleiformis
EX903283       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD550326       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD954049       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD570676       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD954819       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD559687       --> ..................................................  Raphanus raphanistrum subsp. landra
EY946437       --> TGATTTGAACAACTCGGAGATGTCTATCGTGGTTGAAATTGTTAAGACAG  Raphanus sativus cv Rat-Tail Radish #3870
EV527173       --> TGATTTGAACAACCCGGAGATGTCTATCGTGGTTGAAATTGTCAAG----  Raphanus raphanistrum subsp. maritimus
FD961845       --> TGATTTGAACAACCCGGAGATGTCTATCGTGGTTGAAATTGTCAAGACAG  Raphanus raphanistrum subsp. maritimus

               1051   -   1101
UN23092        --> TGTGCTTAATTGGGGTGG-TGGAGAAGTACAA-GGAGCTGGCAAAGTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX907377       <-- ..................................................
EV531481       <-- TGTGCTTAATTGGGGTGG-TGGAGAAGTACAA-GGAGCTGGCAAAGTACA
EX777461       <-- TGTGCTTAATTGGGGTGG-TGGAGAAGTACAA-GGAGCTGGCAAAGTACA
EY942533       <-- TGTGCTTAATTGGGGTGG-TGGAGAAGTACAA-GGAGCTGGCAAAGTACA
FD574638       <-- TGTGCTTAATTGGGGTGG-TGGAGAAGTACAA-GGAGCTGGCAAATTACA
EX892804       <-- TGTGCTTAATTGGGGTGG-TGGAGAAGTACAA-GGAGCTGGCAAAGTACA
FD950375       <-- TGTGCTTAATTGGGGTGG-TGGAGAAGTACAA-GGAGCTGGCAAAGTACA
FD555349       <-- TGTGCTTAATTGGGGTGG-TGGAGAAGTACAA-GGAGCTGGCAAAGTACA
EV546461       <-- TGTGCTTAATTGGGGTGG-TGGAGAAGTACAA-GGAGCTGGCAAAGTACA
FD546296       <-- TGTGCTTAATTGGGGTGG-TGGAGAAGTACAA-GGAGCTGGCAAAGTACA
EX888967       --> ..................................................
EX903283       --> ..................................................
FD550326       --> ..................................................
FD954049       --> ..................................................
FD570676       --> ..................................................
FD954819       --> ..................................................
FD559687       --> ..................................................
EY946437       --> TGTGCTTAATTGGGGTGG-TGGAGAAGTACAA-G-AGCTGGCAAAGTACA
EV527173       --> TGTGCTTAATTGGGGTGGGTGGAGAAGTACAAAGGAGCTGGCAAAGTACA
FD961845       --> TGTGCTTAATTGGGGTGG-TGGAGAAGTACAA-GGAGCTGGCAAAGTACA

               1101   -   1151
UN23092        --> ATCTCAGGCAGCTCACGTCAACCAAGTGATGCAACTTTTACTATGTTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX907377       <-- ..................................................
EV531481       <-- ATCTCAGGCAGCTCACGTCAACCAAGTGATGCAACTTCTACTATGTTTTG
EX777461       <-- ATCTCAGGCAGCTCACGTCAACCAAGTGATGCAACTTTTACTATGTTTTG
EY942533       <-- ATCTCAGGCAGCTCACGTCAACCAAGTGATGCAACTTTTACTATGTTTTG
FD574638       <-- ATTTCAGGCAGCTCACGTCAACCAAGTGATGCAACTTTTACTATGTTTTG
EX892804       <-- ATCTCAGGCAGCTCACGTCAACCAAGTGAT....................
FD950375       <-- ATCTCAGGCAGCTCACGTCAACCAAGTGATGCAACTTCTACTATGTTTTG
FD555349       <-- ATCTCAGGCAGCTCACGTCAACCAAGTGATGCAACTTTTACTATGTTTTG
EV546461       <-- ATCTCAGGCAGCTCACGTCAACCAAGTGATGCAACTTTTACTATGTTTTG
FD546296       <-- ATCTCAGGCAGCTCACGTCAACCAAGTGATGCAACTTTTATTATGTTTTG
EX888967       --> ..................................................
EX903283       --> ..................................................
FD550326       --> ..................................................
FD954049       --> ..................................................
FD570676       --> ..................................................
FD954819       --> ..................................................
FD559687       --> ..................................................
EY946437       --> ATCTCAG-CAGCTCACGTCAAC-AAGTGATGCA.................
EV527173       --> ATCT..............................................
FD961845       --> ATCTCAGGCAGCTCACGTCAACCAAGTGATGCAACTTCTACTATGTTTTG

               1151   -   1201
UN23092        --> TTTCTCAAGACTAA-GATGCTATGTGTTTTTTTACTGGTAGTGTCATAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX907377       <-- ..................................................
EV531481       <-- TTTCTCAAGACTAAAGATGCTATGTGTTTTTTTACTGGTAGTGTCATAAG
EX777461       <-- TTTCTCAAGACTAAAGATGCTATGTGTTTTTTTACTGGTAGTGTCATAAG
EY942533       <-- TTTCTCAAGACTAA-GATGCTATGTGTTTTTTTACTGGTAGTGTCATAAG
FD574638       <-- TTTTTCAAGACTAA-GATGCTATGTGTTTTTTTACTGGTAGTGTCATAAG
EX892804       <-- ..................................................
FD950375       <-- TTTCTCAAGACTAA-GATGCTATGTGTTTTTTTACTGGTAGTGTCATAAG
FD555349       <-- TTTCTCAAGACTGA-GATGCTATGTGTTTTTTTACTGGTAG--TCATAAG
EV546461       <-- TTTCTCAAGACTAA-GATGCTATGTGTTTTTTTACTGGTGGTGTCATAAG
FD546296       <-- TTTCTCAAGACTAA-GATGCTATGTGTTTTTTTACTGGTAGTGTCATAAG
EX888967       --> ..................................................
EX903283       --> ..................................................
FD550326       --> ..................................................
FD954049       --> ..................................................
FD570676       --> ..................................................
FD954819       --> ..................................................
FD559687       --> ..................................................
EY946437       --> ..................................................
EV527173       --> ..................................................
FD961845       --> TTTCTCAAGACTAAAGATGCTATGTGTTTTTTTACTGGTAGTGTCATAAG

               1201   -   1251
UN23092        --> ACTCTTCTGATTTAAACTTTTTCAAATGGTTGAAGTTT-GTCTTTGGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX907377       <-- ..................................................
EV531481       <-- ACTCTTCTGATTTAAACTTTTTCAAATGGTTGAAGTTT-GTCTTTGGATC
EX777461       <-- ACTCTTCTGATTTAAACTTTTTCAAATGGTTGAAGTTT-GTCTTTGGATC
EY942533       <-- ACTCTTCTGATTTAAACTTTTTCAAATGGTTGAAGTTTTGTCTTTGGATC
FD574638       <-- ACTTTTTTGATTTAAACTTTTTCAAATGGTTGAAGTTT-GTCTTTGGATC
EX892804       <-- ..................................................
FD950375       <-- ACTCTTCTGATTTAAACTTTTTCAAATGGTTGAAGTTT-GTCTTTGGATC
FD555349       <-- ACTCTTCTGATTTAAACTTTTTCAAATGGTTGAAGTTTTGTCTTTGGATC
EV546461       <-- ACTCTTCTGATTTAAACTTTTTCAAATGGTTGAAGTTT-GTCTTTGGATC
FD546296       <-- ACTCTTCTGATTTAAACTTTTTCAAATGGTTGAAGTTT-GTCTTTGGATC
EX888967       --> ..................................................
EX903283       --> ..................................................
FD550326       --> ..................................................
FD954049       --> ..................................................
FD570676       --> ..................................................
FD954819       --> ..................................................
FD559687       --> ..................................................
EY946437       --> ..................................................
EV527173       --> ..................................................
FD961845       --> ACTCTTCTGATTTAAACTTTTTCAAATGGTTGAAGTTT-GTCTTTt....

               1251   -   1301
UN23092        --> CTACATTGTCTGA
                   ~~~~~~~~~~~~~
EX907377       <-- .............
EV531481       <-- CTACATTGTCTGA
EX777461       <-- CTACATTGTCTGA
EY942533       <-- CTACATTGTCTGA
FD574638       <-- CTACATTGTCTGA
EX892804       <-- .............
FD950375       <-- CTACATTGTCTGA
FD555349       <-- CTACATTGTCTGA
EV546461       <-- CTACATTGTCTGA
FD546296       <-- CTACATTGTCTGA
EX888967       --> .............
EX903283       --> .............
FD550326       --> .............
FD954049       --> .............
FD570676       --> .............
FD954819       --> .............
FD559687       --> .............
EY946437       --> .............
EV527173       --> .............
FD961845       --> .............