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Alignment for radish unigene UN23107

               1      -     51
UN23107        --> AACCTCAATTCTTCATCCTCCTCCTCTTACTCCTCACTTCTCTAACCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> AACCTCAATTCTTCATCCTCCTCCTCTTACTCCTCACTTCTCTAACCATC
FD964075       --> ..................................................
FD980426       --> ..................................................
FD570385       --> ..................................................
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               51     -    101
UN23107        --> TCTGCTTACTCATCACCACCCGACGCCGATGCCGAACCAAACCAACCCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> TCTGCTTACTCATCACCACCCGACGCCGATGCCGAACCAAACCAACCCGG
FD964075       --> ..................................................
FD980426       --> ..................................................
FD570385       --> ..................................................
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               101    -    151
UN23107        --> ATCCGACGAAGAATCCGACGATCTGGAACAGCTCCTAGCAGTAGACGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> ATCCGACGAAGAATCCGACGATCTGGAACAGCTCCTAGCAGTAGACGAGC
FD964075       --> ..................................................
FD980426       --> ..................................................
FD570385       --> ..................................................
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               151    -    201
UN23107        --> AGTTACAGCAAGATCTCCCTCCTCACCATCACCACCACCAATCGGAAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> AGTTACAGCAAGATCTCCCTCCTCACCATCACCACCACCAATCGGAAGCC
FD964075       --> ..................................................
FD980426       --> ..................................................
FD570385       --> ..................................................
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               201    -    251
UN23107        --> GAGACGGTGAGCAAGGCGCAGAGGATCGTGCTCGAGCTCAGCGGCGACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> GAGACGGTGAGCAAGGCGCAGAGGATCGTGCTCGAGCTCAGCGGCGACAA
FD964075       --> ..................................................
FD980426       --> ..................................................
FD570385       --> ..................................................
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               251    -    301
UN23107        --> CGCGAAGCGAGTGATCGGCGGGAACGAGTTCGTGATGGTTCTAGGCTACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> CGCGAAGCGAGTGATCGGCGGGAACGAGTTCGTGATGGTTCTAGGCTACG
FD964075       --> ..................................................
FD980426       --> ..................................................
FD570385       --> ..................................................
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               301    -    351
UN23107        --> CGCCCTGGTGCGCGCGCAGCGCGGATCTGATGCCGAAGTTTTCGGAGGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> CGCCCTGGTGCGCGCGCAGCGCGGATCTGATGCCGAAGTTTTCGGAGGCG
FD964075       --> ..................................................
FD980426       --> ..................................................
FD570385       --> ..................................................
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               351    -    401
UN23107        --> GCGACGGATTTGAAGGAAATCGGGAGTCCGGTAGTGATGGCGAAGGTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> GCGACGGATTTGAAGGAAATCGGGAGTCCGGTAGTGATGGCGAAGGTGGA
FD964075       --> .....................GGGAGTCCGGTAGTGATGGCGAAGGTGGA
FD980426       --> ..................................................
FD570385       --> ..................................................
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               401    -    451
UN23107        --> CGGAGATAGGTACTCGAAGGCCGCGTCGGAGATGGAGATCAGGGGGTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> CGGAGATAGGTACTCCAAGGCCGCGTCGGAGATGGAGATCAGGGGGTTCC
FD964075       --> CGGAGATAGGTACTCGAAGGCCGCGTCGGAGATGGAGATCAGGGGGTTCC
FD980426       --> ..................................................
FD570385       --> ..................................................
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               451    -    501
UN23107        --> CCACGCTTCTCCTCTTCGTTAACGGTACTTCTCAGCCTTACACCGGTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> CCACGCTTCTCCTCTTCGTTAACGGTACTTCTCAGCCTTACACCGGTGGA
FD964075       --> CCACGCTTCTCCTCTTCGTTAACGGTACTTCTCAGCCTTACACCGGTGGA
FD980426       --> ..................................................
FD570385       --> ..................................................
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               501    -    551
UN23107        --> TTCTCTGCAGAGGATATAGTCATATGGGTGCAGAAGAAGACTGGTTCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> TTCTCTGCAGAGGATATAGTCATATGGGTGCAGAAGAAGACTGGTTCACC
FD964075       --> TTCTCAGCAGAGGATATAGTCATATGGGTGCAGAAGAAGACTGGTTCACC
FD980426       --> ..................................................
FD570385       --> ..................................................
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               551    -    601
UN23107        --> CATCATTACAGTTAACACAGTTGATGAAGCTCAGAGATTTTTGAACAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> CATCATTACAGTTAACACAGTTGATGAAGCTCAGAGATTTTTGAACAAGT
FD964075       --> CATCATTACAGTTAACACAGTTGATGAAGCTCAGAGATTTCTGAACAAGT
FD980426       --> ..................................................
FD570385       --> ..................................................
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               601    -    651
UN23107        --> ATCATACTTTTGTTGTTGGTCTGTTCAACAAGCTTGAGGGTTCTGAATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> ATCATACTTTTGTTGTTGGTCTCTTCAACAAGCTTGAGGGTTCTGAATAT
FD964075       --> ATCATACTTTTGTTGTTGGTCTGTTCAACAAGCTTGAGGGTTCTGAATAT
FD980426       --> ..................................................
FD570385       --> ..................................................
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               651    -    701
UN23107        --> AATGAATTTGTGAAAGCTGCAAAATCAGACGATGAAATTCAGTTTGTAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> AATGAATTTGTGAAAGCTGCAAAATCAGACAATGAAATTCAGTTTGTAGA
FD964075       --> AATGAATTTGTGAAAGCTGCAAAATCAGACGATGAAATTCAGTTTGTAGA
FD980426       --> ........................gCAGACGATGAAATTCAGTTTGTAGA
FD570385       --> ..................................................
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               701    -    751
UN23107        --> AACAAGTGATATCGATGTTGCGAGACTTCTGTTTCCTGAGCTCAAGACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> AACAAGTGATATCGATGTTGCGAGACTTCTGTTTCCTGAGCTCAAGACCA
FD964075       --> AACAAGTGAGATCGATGTTGCGAGACTTCTGTTTCCTGAGCTCAAGACCA
FD980426       --> AACAAGTGATATCGATGTTGCGAGACTTCTGTTTCCTGAGCTCAAGACCA
FD570385       --> ..................................................
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               751    -    801
UN23107        --> GTGATGTGTTTATTGGCATGGTTAAAACTGAGGCGGAAAGGTACACTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> GTGATGTGTTTATTGGCATGGTTAAAACTGAGGCGGAAAGGTACACTACT
FD964075       --> GTGATGTGTTTATTGGCATGGTTAAAACTGAGGCGGAAAGGTACACTACA
FD980426       --> GTGATGTGTTTATTGGCATGGTTAAAACTGAGGCGGAAAGGTACACTACA
FD570385       --> ..................................................
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               801    -    851
UN23107        --> TATGACGGATCTTACAAAATGGAGAAGATATTGGAGTTTCTAGGCAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> TATGACGGATCTTACAAAATGGAGAAGATATTGGAGTTTCTAGGCAAGAA
FD964075       --> TATGACGGATCTTACAAAATGGAGAAGATATTGGAGTTTCTAGGCAAGAA
FD980426       --> TATGACGGATCTTGCAAAATGGAGAAGATATTGGAGTTTCTAGGCAAGAA
FD570385       --> ..ggatggactTTACAAAATGGAGAAGATATTGGAGTTTCTAGGCAAGAA
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               851    -    901
UN23107        --> TAAGTTTCCGTTGATTACAAAATTGAGTGAAAGCAATACTGCTTGGGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> TAAGTTTCCATTGATTACAAAATTGA........................
FD964075       --> TAAGTTTCCATTGATTACAAAATTGAGTGAAAGCAATACTGCTTGGGTTT
FD980426       --> CAAGTTTCCGTTGATTACAAAATTGAGTGAAAGCAATACTGCTTGGGTTT
FD570385       --> CAAGTTTCCGTTGATTACAAAATTGAGTGAAAGCAATACTGCTTGGGTTT
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               901    -    951
UN23107        --> ACTCTAGTCCTGTTAAGCTTCAGGTTATGATCTTTGCCAAGGCTGATGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> ..................................................
FD964075       --> ACTCTAGTCCTGTTAAGCTTCAGGTTATGATCTTTGCCAAGGCTGATGAC
FD980426       --> ACTCTAGTCCTGTTAAGCTTCAGGTTATGATCTTTGCCAAGGCTGATGAC
FD570385       --> ACTCTAGTCCTGTTAAGCTTCAGGTTATGATCTTTGCCAAGGCTGATGAC
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               951    -   1001
UN23107        --> TTTCAGAATATGGCTAAGCCTCTTGAAGATTTTGCAAGAAGATTTAAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> ..................................................
FD964075       --> TTTCAGAATATGGCTAAGCCTCTTGAAGATTTTGCAAGAAGATTTAAATC
FD980426       --> TTTCAGAATATGGCTCAGCCTCTTGAAGATTTTGCAAGAAGATTTAAATC
FD570385       --> TTTCAGAATATGGCTAAGCCTCTTGAAGATTTTGCAAGAAGATTTAAATC
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               1001   -   1051
UN23107        --> GAAGCTTATGTTTATATATATTGATATAACAAATGAGAACCTTGCGATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- .AAGCTTATGCTTATATATATTGATATAACAAATGAGAACCTTGCGATGC
FD976302       <-- .....TTATGTTTATACATATTGATATAACAAATGAGAACCTTGCGATGC
FD968352       <-- ..................................................
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> ..................................................
FD964075       --> GAAGCTTATGCTTATATATATTGATATAACAAATGAGAACCTTGCGATGC
FD980426       --> GAAGCTTATGTTTATACATATTGATATAACAAATGAGAACCTTGCGATGC
FD570385       --> GAAGCTTATGTTTATATATATTGATATAACAAATGAGAACCTTGCGATGC
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               1051   -   1101
UN23107        --> CATTCTTGACCTTATTCGGAATAGAGGATGCCAACAAAACTGTTGTTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- CATTCTTGACCTTATTCGGAATAGAGGATGCCAACAAAACCGTTGTTGCT
FD976302       <-- CATTCTTGACCTTATTCGGAATAGAGGATGCCAACAAAACTGTTGTTGCT
FD968352       <-- ..................................................
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> ..................................................
FD964075       --> CATTCTTGAC-TTATTCGGAAT............................
FD980426       --> CATTCTTGACCTTATTCGGAATAGAGGATGCCAACAAAACTGTTGTTGCT
FD570385       --> CATTCTTGACCTTATTCGGAATAGAGGATGCCAACAAAACTGTTGTTGCT
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               1101   -   1151
UN23107        --> GCTTTCGATAACAAACTCAACTCCAAGTATTTGCTCGAGTCAGATCCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- GCTTTCGATAACAAACTCAACTCCAAGTATTTGCTCGAGTCAGATCCTTC
FD976302       <-- GCTTTCGATAACAAACTCAACTCCAAGTATTTGCTCGAGTCAGATCCTTC
FD968352       <-- ..................................................
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> ..................................................
FD964075       --> ..................................................
FD980426       --> GCTTTCGATAACAAACTCAACTCCAAGTATTTGCTCGAGTCAGATCCTTC
FD570385       --> GCTTTCGATAACAAACTCAACTCCAAGTATTTGCTCGAGTCAGATCCTTC
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               1151   -   1201
UN23107        --> ACAAAGCAATATAGAAGAGTTTTGTTCAGGACTTGCAGATGGAACCGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ACAAAGCAATATAGAAGAGTTTTGTTCAGGACTTGCAGATGGAACCGTTC
FD976302       <-- ACAAAGCAATATAGAAGAGTTTTGTTCAGGACTTGCAGATGGAACCGTTC
FD968352       <-- ..................................................
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> ..................................................
FD964075       --> ..................................................
FD980426       --> ACAAAGCAATATAGAAGAGTTTTGTTCAGGACTTGCAGATGGAACCGTTC
FD570385       --> ACAAAGCAATATAGAAGAGTTTTGTTCAGGACTTGCATATGGAACCGTTC
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               1201   -   1251
UN23107        --> CACGCTACTACAGGTCAGAGCCAGTTCCAGATAATGAAAATGCAAGCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- CACGCTACTACAGGTCAGAGCCAGTTCCAGATAATGAAAATGCAAGCATA
FD976302       <-- CACGCTACTACAGGTCAGAGCCAGTTCCAGATAATGAAAATGCAAGCATA
FD968352       <-- ..................................................
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> ..................................................
FD964075       --> ..................................................
FD980426       --> CACGCTACTACAGGTCAGAGCCAGTTCCAGATAATGAAAATGCAAGCATA
FD570385       --> AACGCTACTACAGGTCAGAGCCAGTTCCAGATAATGAAAATGCAAGCATA
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               1251   -   1301
UN23107        --> GTGACTGTGG-TGGGGAAGACTTTTGATGAGTTGGTATTGAACAGTCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- GTGACTGTGG-TGGGGAAGACTTTTGATGAGTTGGTATTGAACAGTCAAG
FD976302       <-- GTGACTGTGG-TGGGGAAGACTTTTGATGAGTTGGTATTGAACAGTCAAG
FD968352       <-- ..................................................
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> ..................................................
FD964075       --> ..................................................
FD980426       --> GTGACTGTGGGTGGGGAAGACTTTTGATGAGTTGGTATTGAACAGTCAAG
FD570385       --> GAGACTGTGG-TAGGAAAGACTTTTGATGAGTTGGTATTGAACAGTCGAG
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               1301   -   1351
UN23107        --> AAAATGTTATTCTTGAGGTACATACACCATGGTGTGTGAACTGCGAGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- AAAATGTTACTCTTGAGGTACATACACCATGGTGTGTGAACTGCGAGGCA
FD976302       <-- AAAATGTTATTCTTGAGGTACATACACCATGGTGTGTGAACTGCGAGGCA
FD968352       <-- ..................................................
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> ..................................................
FD964075       --> ..................................................
FD980426       --> AAAATGTTATTCTTGAGGTACATACACCATGGTGTGTGAACTGCGAGGCA
FD570385       --> AAAATGTTCTTCTTGAGGTACATACACCATGGTGTGTGAACTGCGAGGCA
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               1351   -   1401
UN23107        --> ATGAGCAAACAGGTCGTGAAGTTAGCTAAGCATTTCAAAGGCTTTGAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ATGAGCAAACAGGTCGTGAAGTTAGCTAAGCATTTCAAAGGCTTTGAGAA
FD976302       <-- ATGAGCAAACAGGTCGTGAAGTTAGCTAAGCATTTCAAAGGCTTTGAGAA
FD968352       <-- .TGAGCAAACAGGTCGTGAAGTTAGCTAAGCATTTCAAAGGCTTTGAGAA
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> ..................................................
FD964075       --> ..................................................
FD980426       --> -TGAGCAAACAGGTCGTGAAGT-AGCTAAGCATTT...............
FD570385       --> ATGAGCAAACAGGTCGCCAAGTTAGCTAAGCATTTCAAAGGCTTTGAGAA
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               1401   -   1451
UN23107        --> TCTTGTTTTTGCAAGAATTGATGCGTCTACAAATGAGCATGCTAAATTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- TCTTGTTTTTGCAAGAATTGATGCGTCTACAAATGAGCATGCTAAACTAC
FD976302       <-- TCTTGTTTTTGCAAGAATTGATGCGTCTACAAATGAGCATGCTAAACTAC
FD968352       <-- TCTCGTTTTCGCAAGAATTGATGCGTCTACAAATGAGCATGCTAAATTAC
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> ..................................................
FD964075       --> ..................................................
FD980426       --> ..................................................
FD570385       --> TCTTGTTTTTGCAAGAATCGATGCGTCTACAAATGAGCATGCCAAATTAC
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               1451   -   1501
UN23107        --> AGGTTGATGATTATCCGACGATCTTGCTCTACAAATCTGGTGAAAAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- AGGTTGATGATTATCCGACGATCTTGCTCTACAAATCTGGTGAAAAAGAG
FD976302       <-- AGGTTGATGATTATCCGACGATCTTGCTCTACAAATCTGGTGAAAAAGAG
FD968352       <-- AGGTTGATGATTATCCGACGATCTTGCTCTACAAATCTGGTGAAAAGGAG
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> ..................................................
FD964075       --> ..................................................
FD980426       --> ..................................................
FD570385       --> AGGTTGATGATTATCCGACGATCTTGCTCTACAAATCTGGTGAAAAG-AG
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               1501   -   1551
UN23107        --> AAGCCGTTAAAGCTATCAACTAAATTGAGCGCTAAAGACATGGCTGTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- AAGCCGTTAAAGCTATCAACTAAATTGAGCGCTAAAGACATGGCTGTTTC
FD976302       <-- AAGCCGTTAAAGCTATCAACTAAATTGAGCGCTAAAGACATGGTTGTTTC
FD968352       <-- AAGCCGTTAAAGCTATCAACTAAATTGAGCGCCAAAGACATGGCTGTTTC
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> ..................................................
FD964075       --> ..................................................
FD980426       --> ..................................................
FD570385       --> AAGCCGTTAAAGCTATCAACTAAATTGAGCGCCAAAGACATGGCTGTTTC
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               1551   -   1601
UN23107        --> GATCAATGAAGAGTTGAAACCAAGAGGTGGTTCTGTTAAGGATGAGTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- GATCAATGAAGAGTTGAAACCAAGAGGTGGTTCTGTTAAGGATGAGTTGT
FD976302       <-- GATCAATGAAGAGTTGAAACCAAGAGGTGGTTCTGTTAAGGATGAGTTGT
FD968352       <-- GATCAATGAAGAGTTGAAACCAAGAGGTGGTTCTGTTAAGGATGAGTTGT
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> ..................................................
FD964075       --> ..................................................
FD980426       --> ..................................................
FD570385       --> GATCAATGA-GAG-TGAAACCAgagtggtct...................
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               1601   -   1651
UN23107        --> AGTCAAGTTTT-TTAAGGATATGTAGACAAAAGAAGAGACAGAGAGAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- AGTCAAGTTTT-TTAAGGATATGTAGACAAAAGAAGAGACAGAGAGAAAG
FD976302       <-- AGTCAAGTTTT-TTAAGGATATGTAGACAAAAGAAGAGACAGAGAGAAAG
FD968352       <-- AGTCAAGCTTTATTAAGGATATGTAGACAAAAGAAGAGACAGAGAGAAAG
EX887941       <-- ..................................................
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> ..................................................
FD964075       --> ..................................................
FD980426       --> ..................................................
FD570385       --> ..................................................
EY935589       --> ......GTTTT-TTAAGGATATGTAGACAAAAGAAGAGACAGAGAGAAAG
FD934244       --> ...................................GAGACAGAAAGAAAG
EV540267       --> .................................................G
EY925786       --> ..................................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               1651   -   1701
UN23107        --> ATCACAATGTGATGACATTACATGTTTTTAATATATTGTCTGGAATTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ATCACAATGTGATGACATTACATGTTTTTAATATATTGTCTGGAATTGGA
FD976302       <-- ATCACAATGTGATGACATTACATGTTTTTAATATATTGTCTGGAATTGGA
FD968352       <-- ATCACAGTGTGATGACATTACATGTTTTTAATATATTGTCTGGAATTGGA
EX887941       <-- .................................................A
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> ..................................................
FD964075       --> ..................................................
FD980426       --> ..................................................
FD570385       --> ..................................................
EY935589       --> ATCACAATGTGATGACATTACATGTTTTTAATATATTGTCTGGAATTGGA
FD934244       --> ATCACAATGTGATGACATTACATGTTTTTAATATATTGTCTGGAATTGGA
EV540267       --> ATCACAATGTGATGACATTACATGTTTTTAATATATTGTCTGGAATTGGA
EY925786       --> ..........GATGACATTACATGTTTTTAATATATTGTCTGGAATTGGA
EX760517       --> .............................AATATATTGTCTGGAATTGGA
EY894226       --> ..................................................

               1701   -   1751
UN23107        --> AAACAATTCATTTCAACGAACTGACATTACAATTGATATTGTGTGATACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- AAACAATTCATTTCAACGAACTGACATTATAATTGATATTGTGTGATACA
FD976302       <-- AAACAATTCATTTCAACGAACTGACATTAC....................
FD968352       <-- AAACAATTCATTac....................................
EX887941       <-- AAACAATTCATTTCAACGAACTGACATTACAATTGATATTGCGTGATACA
FD937681       <-- ..................................................
EY916801       <-- ..................................................
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> ..................................................
FD964075       --> ..................................................
FD980426       --> ..................................................
FD570385       --> ..................................................
EY935589       --> AAACAATTCATTTCAACGAACTGACATTACAATTGATATTGTGTGATACA
FD934244       --> AAACAATTCATTTCAACGAACTGACATTACAATTGATATTGTGTGATACA
EV540267       --> AAACAATTCATCTCAACGAACTGACATTACAATTGATATTGTGTGATACA
EY925786       --> AAACAATTCATTTCAACGAACTGACATTACAATTGATATTGTGTGATACA
EX760517       --> AAACAATTCATTACAACGAACTGACATTACAATTGATATTGTGTGATACA
EY894226       --> .....................TGACATTATAATTGATATTGTGTGATACA

               1751   -   1801
UN23107        --> AAATAAAAATTTGAAAAAGAAAAACAGAATACTAATAGTACCCTCTCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- AAATAAAAATTTG.....................................  Raphanus raphanistrum subsp. maritimus
FD976302       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968352       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887941       <-- AAATAAAAAATTGAAAAAGAAAAACAGAATACTAATAGTACCCTCTCTGT  Raphanus sativus var. oleiformis
FD937681       <-- ............................ATACTAATAGTACCCTCTCTGT  Raphanus sativus var. oleiformis
EY916801       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY929322       <-- ..................................................  Raphanus sativus var. oleiformis
EX756783       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898064       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY939700       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY444930       --> ..................................................  Raphanus sativus cv GSK3-1
FD964075       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD980426       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570385       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY935589       --> AAATAAAAATTTGAAAAAGAAAAACAGAATACTAGTAGTACCCTCTCTGT  Raphanus sativus cv Early Scarlet Globe
FD934244       --> AAATAAAAAATTGAAAAAGAAAAACAGAATACTAATAGTACCCTCTCTGT  Raphanus sativus var. oleiformis
EV540267       --> AAATAAAAATTTGAAAAAGAAAAACAGAATACTAATAGTACCCTCTTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925786       --> AAATAAAAAATTGAAAAAGAAAAACAGAATACTAATAGTACCCTCTCTGT  Raphanus sativus var. oleiformis
EX760517       --> AAATAAAAATTTGAAAAAGAAAAACAGAATACTAATAGTACCCTCTCTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY894226       --> AAATAAAAATTTGAAAAAGAAAAACAGAATACTAGTAGTACCCTCTCTGT  Raphanus raphanistrum subsp. maritimus

               1801   -   1851
UN23107        --> GATTAGCATTCACACCCTGTTGATCTTTGTTGCTGACCTCCAGCAACATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- GATTAGCATTCACACCCTGTTGATCTTTGTTGCTGACCTCCAGCAACATC
FD937681       <-- GATTAGCATTCACACCCTGTTGATCTTTGTTGCTGACCTCCAGCAACATC
EY916801       <-- ....AGCATTCACACC-TGTTGATCTTTGTTGCTGAC-TCCAGCAACATC
EY929322       <-- ..................................................
EX756783       <-- ..................................................
EY898064       <-- ..................................................
EY939700       <-- ..................................................
FY444930       --> ..................................................
FD964075       --> ..................................................
FD980426       --> ..................................................
FD570385       --> ..................................................
EY935589       --> GATTAGCATTCACACCCTGTTGATCTTTGTTGCTGACCTCCAGCAACATC
FD934244       --> GATTAGCATTCACACCC.................................
EV540267       --> GATTAGCATTCACACCCTGTTGATCTTTGTTGCTGACCTCCAGCAACATC
EY925786       --> GATTAGCATTCACACCCTGTTGATCTTTGTTGCTGACCTCCAGCAACATC
EX760517       --> GATTAGCATTCACACCCTGTTGATCTTTGTTGCTGACCTCCAGCAACATC
EY894226       --> GATTAGCATACACACCCTGTTGATCTTTGTTGCTGACCTCCAGCAACATC

               1851   -   1901
UN23107        --> AATGGTGTCTGGCATGTACGGTTCTTCTTCAGGTTCATTCTTGAATGCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- AAGGGTGTCTGGCATGTACGGTTCTTCTTCAGGTTCATTCTTGAATGCGT
FD937681       <-- AATGGTGTCTGGCATGTACGGTTCTTCTTCGGGTTCATTCTTGAATGCGT
EY916801       <-- AATGGTGTCTGGCATGTACGGTTCTTCTTCAGGTTCATTCTTGAATGCGT
EY929322       <-- ........CTGGCATGTACGGTTCTTCTTCAGGTTCATTCT-GAATGCGT
EX756783       <-- ...............GTACGGTTCTTCTTCAGGTTCATTCTTGAATGCGT
EY898064       <-- .............................CAGGTTCAT-C-TGAATGCGT
EY939700       <-- ..................................................
FY444930       --> ..................................................
FD964075       --> ..................................................
FD980426       --> ..................................................
FD570385       --> ..................................................
EY935589       --> AATGGTGTCTGGCATGTACGGTTCTTCTTCAGGTTCATTATTGAATGCGT
FD934244       --> ..................................................
EV540267       --> AATGGTGTCTGGCATGTACGGTTCTTCTTCAGGTTCATTCTTGAATGCAT
EY925786       --> AATGGTGTCTGGCATGTACGGTTCTTCTTCAGGTTCATTCTTGAATGCGT
EX760517       --> AATGGTGTCTGGCATGTACGGTTCTTCTTCAGGTTCATTCTTGAATGCGT
EY894226       --> AATGGTGTCTGGCATGTACGGTTCTTCTTCAGGTTCATTCTTGAATGCGT

               1901   -   1951
UN23107        --> TTTTGGTTATGCATTCAAAAGCTGCATCTACATTGAACCCTT-CTTTGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD976302       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968352       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887941       <-- TTTTGGTTATGCATTCAAAAGCTGCATCTACATTGAACCCTT-CTTTGGC  Raphanus sativus var. oleiformis
FD937681       <-- TTTTGGTTATGCATTCAAAAGCTGCATCTACATCGAACCCTT-CTTTGGC  Raphanus sativus var. oleiformis
EY916801       <-- TTTTGGTAATGCACTCAAAAGCTGCATCTACATTGAACCTTT-CTTTGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY929322       <-- TTT-GGTTATGCATTCAAAAGCTGCATCTACATAGAACCCTT-CTTTGGC  Raphanus sativus var. oleiformis
EX756783       <-- TTTTGGTTATGCATTCAAATGCTGCATCTACATTGAACCCTT-CTTTGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898064       <-- TTT-GGTTATGCACTCAAAAGCTGCATCTACATTGAACCCTTTCTTTGGC  Raphanus raphanistrum subsp. maritimus
EY939700       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY444930       --> ..................................................  Raphanus sativus cv GSK3-1
FD964075       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD980426       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570385       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY935589       --> TTTTGGTTATGCACTCAAAAGCTGCATCTACATTGAACCCTT-CTTTGGC  Raphanus sativus cv Early Scarlet Globe
FD934244       --> ..................................................  Raphanus sativus var. oleiformis
EV540267       --> TTTTGGTAATGCACTCAAATGCTGCATCTACATTGAATCCTT-CTTTGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925786       --> TTTTGGTTATGCATTCAAAAGCTGCATCTACATAGAACCCTT-CTTTGGC  Raphanus sativus var. oleiformis
EX760517       --> TTTTGGTTATGCATTCAAATGCTGCATCTACATTGAACCCTT-CTTTGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY894226       --> TTTTGGTTATGCACTCAAAAGCTGCATCTACATTGAACCCTT-CTTTGGC  Raphanus raphanistrum subsp. maritimus

               1951   -   2001
UN23107        --> AGATGTCTCAAAGTAAGGAATGTTTCCTTTAGATGCACACCATGCCTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD976302       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968352       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887941       <-- TGATGTCTCAAAGTAAGGAATGTTTCCTTTAGATGCACACCATGCCTTTG  Raphanus sativus var. oleiformis
FD937681       <-- TGATGTCTCAAAGTAAGGAATGTTTCCTTTAGATGCACACCATGCCTTTG  Raphanus sativus var. oleiformis
EY916801       <-- AGATGTCTCAAAGTAAGGAATGTTTCCTTTAGATGCACACCATGCCTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY929322       <-- TGATGTCTCAAAGTAAGGAATGTTTCCTTTAGATGCACACCATGCCTTTG  Raphanus sativus var. oleiformis
EX756783       <-- AGATGTCTCAAAGTAAGGAATGTTTCCTTTAGATGCACACCATGCCTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898064       <-- AGATGTCTCAAAGTAAGGAATGTTTCCTTTAGATGCACACCATGCCTTCG  Raphanus raphanistrum subsp. maritimus
EY939700       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY444930       --> ..................................................  Raphanus sativus cv GSK3-1
FD964075       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD980426       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570385       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY935589       --> AGATGTCTCAAAGTAAGGAATGTTTCCTTTAGATGCACACCATGCCCTTG  Raphanus sativus cv Early Scarlet Globe
FD934244       --> ..................................................  Raphanus sativus var. oleiformis
EV540267       --> AGATGTCTCAAAGTAAGGAATGTTTCCTTTAGATGCACACCATGCCTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925786       --> TGATGTCTCAAAGTAAGGAATGTTTCCTTTAGATGCACACCATGCCTTTG  Raphanus sativus var. oleiformis
EX760517       --> AGATGTCTCAAAGTAAGGAATGTTTCCTTTAGATGCACACCATGCCTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY894226       --> AGATGTCTCAAAGTAAGGAATGTTTCCTTTAGATGCACACCATGCCTTCG  Raphanus raphanistrum subsp. maritimus

               2001   -   2051
UN23107        --> CTTTCTTCTCAGAAACCACTCGGCTTTTGCCACCATCAACATCGGTCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD976302       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968352       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887941       <-- CTTTCTTCTCAGAAACCACTCGGCTTTTGCCACCATCAACATCGGTCTTG  Raphanus sativus var. oleiformis
FD937681       <-- CTTTCTTCTCAGAAACCACTCGGCTTTTGCCACCATCAACATCGGTCTTG  Raphanus sativus var. oleiformis
EY916801       <-- CTTTCTTCTCAGAAACCACTCGGCTTTTGCCACCGTCAACATCGGTCTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY929322       <-- CTTTCTTCTCAGAAACCACTCGGCTTTTGCCACCATCAACATCGGTCTTG  Raphanus sativus var. oleiformis
EX756783       <-- CTTTCTTCTCAGAAACCACTCGGCTCTTGCCACCATCAACATCGGTCTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898064       <-- CTTTCTTCTCAGAAACCACTCGGCTCTTGCCACCATCAACATCGGTCTTG  Raphanus raphanistrum subsp. maritimus
EY939700       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY444930       --> ..................................................  Raphanus sativus cv GSK3-1
FD964075       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD980426       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570385       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY935589       --> CTTTCTTCTCAGAAACCACTCGGCTTTTGCCGCCATCAACATCGGTCTTG  Raphanus sativus cv Early Scarlet Globe
FD934244       --> ..................................................  Raphanus sativus var. oleiformis
EV540267       --> CTTTCTTCTCAGAAACCACTCGGCTCTTGCCACCATCAACATCGGTCTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925786       --> CTTTCTTCTCAGAAACCACTCGGCTTTTGCCACCATCAACATCGGTCTTG  Raphanus sativus var. oleiformis
EX760517       --> CTTTCTTCTCAAAAACCACTCGGCTCTTGCCACCATCAACATCGGTCTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY894226       --> CTTTCTTCTCAGAAACCACTCGGCTCTTGCCACCATCAACATCGGTCTTG  Raphanus raphanistrum subsp. maritimus

               2051   -   2101
UN23107        --> TTTCCCAACACGACAAAAGGGAAGTTTTCAGGATCGGATGGACTAGCCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD976302       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968352       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887941       <-- TTTCCCAACACGACAAAAGGGAAGTTTTCAGGATCGGATGGACTAGCCTG  Raphanus sativus var. oleiformis
FD937681       <-- TTTCCCAACACGACAAAAGGGAAGTTTTCAGGATCGGATGGACTAGCCTG  Raphanus sativus var. oleiformis
EY916801       <-- TTTCCCAACACGACAAACGGGAAGTTTTCAGGATCTGATGGGCTAGCCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY929322       <-- TTTCCCAACACGACAAAAGGGAAGTTTTCAGGATCGGATGGATTAGCCTG  Raphanus sativus var. oleiformis
EX756783       <-- TTCCCCAACACAACAAAAGGGAAGTTTTCAGGATCAGATGGACTAGCCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898064       <-- TTTCCCAACACGACAAACGGGAAGTTCTCAGGATCTGATGGGCTAGCCTG  Raphanus raphanistrum subsp. maritimus
EY939700       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY444930       --> ..................................................  Raphanus sativus cv GSK3-1
FD964075       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD980426       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570385       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY935589       --> TTTCCCAACACGACAAAAGGGAAGTTTTCAGGATCGGATGGACTAGCCTG  Raphanus sativus cv Early Scarlet Globe
FD934244       --> ..................................................  Raphanus sativus var. oleiformis
EV540267       --> TTTCCCAACACGACAAACGGGAAGTTTTCAGGATCTGATGGGCTAGCCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925786       --> TTTCCCAACACGACAAAAGGGAAGTTTTCAGGATCGGATGGATTAGCCTG  Raphanus sativus var. oleiformis
EX760517       --> TTCCCCAACACAACAAAAGGGAAGTTTTCAGGATCAGATGGACTAGCCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY894226       --> TTTCCCAACACGACAAACGGGAAGTTCTCAGGATCTGATGGGCTAGCCTG  Raphanus raphanistrum subsp. maritimus

               2101   -   2151
UN23107        --> AATCAAGAACTCTTCTCTCCAGTTATTAAGATTCTCAAAAGACTTCATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- AATCAAGAACTCTTCTCTCCAGTTATTAAGATTCTCAAAAGACTTCATAA
FD937681       <-- AATCAAGAACTCTTCTCTCCAGTTATTAAGATTCTCAAAAGACTTCATAA
EY916801       <-- AATCAAGAACTCTTCTCTCCAGTTATTAAGATTCTCAAAAGACTTCATAA
EY929322       <-- AGTCAAGAACTCTTCTCTCCAGTTATTAAGATTCTCAAAAGACTTCATAA
EX756783       <-- AATCAAGAACTCTTCTCTCCAGTTATTGAGATTCTCAAAAGACTTCATAA
EY898064       <-- AATCAAGAACTCTTCTCTCCAGTTATTAAGATTCTCAAAAGACTTCATAA
EY939700       <-- ..................................................
FY444930       --> ..................................................
FD964075       --> ..................................................
FD980426       --> ..................................................
FD570385       --> ..................................................
EY935589       --> AATCAAGAACTCTTCTCTCCAGTTATTAAGATTCTCAAAAGACTTCATAA
FD934244       --> ..................................................
EV540267       --> AATCAAGAACTCTTCTCTCCAGTTATTAAGATTCTCAAAAGACTTCATAA
EY925786       --> AGTCAAGAACTCTTCTCTCCAGTTATTAAGATTCTCAAAAGACTTCATAA
EX760517       --> AATCAAGAACTCTTCTCTCCAGTTATTGAGATTCTCAAAAGACTTCATAA
EY894226       --> AATCAAGAACTCTTCTCTCCAGTTATTAAGATTCTCAAAAGACTTCATAA

               2151   -   2201
UN23107        --> CATTGACATCGTTCACAAGAACACAACAATCAGCTCCTCTGTAGAAAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD976302       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968352       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887941       <-- CATTGACATCGTTCACAAGAACACAACAATCAGCTCCTCTGTAGAAAGCT  Raphanus sativus var. oleiformis
FD937681       <-- CATTGACATCGTTCACAAGAACACAACAATCAGCTCCTCTGTAGAAAGCT  Raphanus sativus var. oleiformis
EY916801       <-- CATTGACATCGTTCACAAGAACACAACAATCAGCTCCTCTGTAGAAAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY929322       <-- CATTGACATCGTTCACAAGAACACAACAATCAGCTCCTCCGTAGAAAGCT  Raphanus sativus var. oleiformis
EX756783       <-- CATTGACATCGTTCACAAGAACACAACAATCAGCTCCTCTGTAGAAAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898064       <-- CATTGACATCGTTCACAAGAACACAACAATCAGCTCCTCTGTAGAAAGCT  Raphanus raphanistrum subsp. maritimus
EY939700       <-- .............................TCAGCTCCTCTGTAGAAAGCT  Raphanus sativus cv Early Scarlet Globe
FY444930       --> ..................................................  Raphanus sativus cv GSK3-1
FD964075       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD980426       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570385       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY935589       --> CATTGACATCGTTCACAAGAACACAACAATCAGCTCCTCTGTAGAAAGCT  Raphanus sativus cv Early Scarlet Globe
FD934244       --> ..................................................  Raphanus sativus var. oleiformis
EV540267       --> CATTGACATCGTTCACAAGAACACAACAATCAGCTCCTCTGTAAAAAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925786       --> CATTGACATCGTTCACAAGAACACAACAATCAGCTCCTCCGTAGAAAGCT  Raphanus sativus var. oleiformis
EX760517       --> CATTGACATCGTTCACAAGAACACAACAATCAGCTCCTCTGTAGAAAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY894226       --> CATTGACATCGTTCACAAGAACACAACAATCAGCTCCTCTGTAGAAAGCT  Raphanus raphanistrum subsp. maritimus

               2201   -   2251
UN23107        --> ACTCCCAAACTTTGGAACCTTTCTTGCCCAGCAGTATCCCAAATCTGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- ACTCCCAAACTTTGGAACCTTTCTTGCCCAGCAGTATCCCAAATCTGTAA
FD937681       <-- ACTCCCAAACTTTGGAACCTTTCTTGCCCAGCAGTATCCCAAATCTGTAA
EY916801       <-- ACTCCCAAACTTTGGAACCTTTCTTGCCCAGCAGTATCCCAAATCTGTAA
EY929322       <-- ACTCCCAAACTTTGGAACCTTTCTTGCCCAGCAGTATCCCAAATCTGTAA
EX756783       <-- ACTCCCAAACTCTGGAACCTTTCTTGCCCAGCAGTATCCCAAATCTGTAA
EY898064       <-- ACTCCCAAACTTTGGAACCTTTCTTGCCCAGCAGTATCCCAAATCTGTAA
EY939700       <-- ACTCCCAAACTTTGGA-CCTTTCTTGCCCAGCAGTATCCCAAATCTGTAA
FY444930       --> ..................................................
FD964075       --> ..................................................
FD980426       --> ..................................................
FD570385       --> ..................................................
EY935589       --> ACTCCCAAACTTTGGAACCTTTCTTGCCCAGCAGTATCCCAAATC.....
FD934244       --> ..................................................
EV540267       --> ACTCCCAAACTTTGGAACCTTTCTTGCCCAGCAGTATCCCAAATCTGTAA
EY925786       --> ACTCCCAAACTTTGGAACCTTTCTTGCCCAGCAGTATCCCAAATCTGTAA
EX760517       --> ACTCCCAAACTCTGGAACCTTTCTTGCCCAGCAGTATCCCAAATCTGTAA
EY894226       --> ACTCCCAAACTTTGGAACCTTTCTTGCCCAGCAGTATCCCAAATCTGTAA

               2251   -   2301
UN23107        --> AGTGAAGATCCTGTCATCAATTTGAACCTCTTTAGTCAAGAAATCTGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- AGTGAAGATCCTGTCATCAATTTGAACCTCTTTAGTCAAGAAATCTGCTC
FD937681       <-- AGTGAAGATCCTGTCATCAATTTGAACCTCTTTAGTCAAGAAATCTGCTC
EY916801       <-- AGTGAAGATCCTGTCATCAATTTGAACCTCTTTAGTCAAGAAATCTGCTC
EY929322       <-- AGTGAAGATCCTGTCATCAATTTGAACCTCTTTAGTCAAGAAATCTGCTC
EX756783       <-- AGTGAAGATCCTGTCATCAATTTGAACCTCTTTAGTCAAGAAATCTGCTC
EY898064       <-- AGTGAAGATCCTGTCATCAATTTGAACCTCTTTAGTCAAGAAATCTGCTC
EY939700       <-- AGTGAAGATCCTGTCATCAATTTGAACCTCTTTAGTCAAGAAATCTGCTC
FY444930       --> ..................................................
FD964075       --> ..................................................
FD980426       --> ..................................................
FD570385       --> ..................................................
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> AGTGAAGATCCTGTCATCAATTTGGACCTCTTTAGTCAAGAAATCTGCTC
EY925786       --> AGTGAAGATCCTGTCATCAATTTGAACCTCTTTAGTCAAGAAATCTGCTC
EX760517       --> AGTGAAGATCCTGTCATCAATTTGAACCTCTTTAGTCAAGAAATCTGCTC
EY894226       --> AGTGAAGATCCTGTCATCAATTTGAACCTCTTTAGTCAAGAAATCTGCTC

               2301   -   2351
UN23107        --> CAATCGTCGCTTTATACTGATTGCTAAATTTGCGATTCACAAACTGATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- CAATCGTCGCTTTATACTGATTGCTAAATTTGCGATTCACGAACTGATTC
FD937681       <-- CAATCGTCGCTTTATACTGATTGCTAAATTTGCGATTCACAAACTGATTC
EY916801       <-- CAATCGTCGCTTTATAATGATTGCTAAATTTGCGATTCACAAACTGATTC
EY929322       <-- CAATCGTCGCTTTATACTGATTGCTAAATTTGCGATTCACAAACTGATTC
EX756783       <-- CAATCGTCGCTTTATACTGATTGCTAAATTTGCGATTCACAAACTGATTC
EY898064       <-- CAATCGTCGCTTTATACTGATTGCTAAATTTGCGATTCACAAACTGATTC
EY939700       <-- CAATCGTCGCTTTATACTGATTGCTAAATTTGCGATTCACAAACTGATTC
FY444930       --> ..................................................
FD964075       --> ..................................................
FD980426       --> ..................................................
FD570385       --> ..................................................
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> CAATCGTCGCTTTATACTGATTGCTAAATTTTCGATTCACAAACTGATTC
EY925786       --> CAATCGTCGCTTTATACTGATTGCTAAATTTGCGATTCACAAACTGATTC
EX760517       --> CAATCGTCGCTTTATACTGATTGCTAAATTTGCGATTCACAAACTGATTC
EY894226       --> CAATCGTCGCTTTATACTGATTGCTAAATTTGCGATTCACAAACTGATTC

               2351   -   2401
UN23107        --> ATCAACGATGTCTTCCCAACCCCGCTATCTCCGAGGATGATGACTTTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- ATCAACGATGTCTTCCCAACCCCGCTATCTCCGAGGATGATGACTTTCAG
FD937681       <-- ATCAACGATGTCTTCCCAACCCCGCTATCTCCGAGGATGATGACTTTCAG
EY916801       <-- ATCAACGATGTCTTCCCAACCCCGCTATCTCCGAGGATGATGACTTTCAG
EY929322       <-- ATCAACGATGTCTTCCCAACCCCGCTATCTCCGAGGATGATGACTTTCAG
EX756783       <-- ATCAACGATGTCTTTCCAACCCCGCTATCTCCGAGGATGATGACTTTCAG
EY898064       <-- ATCAACGATGTCTTCCCAACCCCGCTATCTCCGAGGATGATGACTTTCAG
EY939700       <-- ATCAACGATGTCTTCCCAACCCCGCTATCTCCGAGGATGATGACTTTCAG
FY444930       --> ..................................................
FD964075       --> ..................................................
FD980426       --> ..................................................
FD570385       --> ..................................................
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ATCAACGATGTCTTTCCAACCCCGCTATCTCCAAGGATGATGACTTTCAG
EY925786       --> ATCAACGATGTCTTCCCAACCCCGCTATCTCCGAGGATGATGACTTTCAG
EX760517       --> ATCAACGATGTCTTTCCAACCCCGCTATCTCCGAGGATGATGACTTTCAG
EY894226       --> ATCAACGATGTCTT....................................

               2401   -   2451
UN23107        --> AAGAACTCTCCGGCGAGACGACATTTGGCGGAAGAGTTT-AATTTAATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- AAGAACTCTCCGGCGAGACGACATTTGGCGGAAGAGTTT-AATTTAATTT
FD937681       <-- AAGAACTCTCCGGCGAGACGACATTTGGCGGAAGAGTTT-AATTTAATTT
EY916801       <-- AAGAACTCTCCGGCGAGACGACATT-GGCGGAAGATTTT-AATTTAATTT
EY929322       <-- AAGAACTCTCCGGCGAGACGACATTTGGCGGAAGAGTTT-AATTTAATTT
EX756783       <-- AAGAACTCTCCGGCGAGACGACATT-GGCGGAAGAGTTTTAATTTAATTT
EY898064       <-- AAGAACTCTCCGGCGAGACGACATT-GGCGGAAGATTTT-AATTTAATTT
EY939700       <-- AAGAACTCTCCGGCGAGACGACATTTGGCGGAAGAGTTT-AATT......
FY444930       --> ..................................................
FD964075       --> ..................................................
FD980426       --> ..................................................
FD570385       --> ..................................................
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> AAGAACTCTCCGGCGAGACGACATTTGGC.....................
EY925786       --> AAGAACTCTCCGGCGAGACGACATTTGGCGGAAGAGTTT-AATTTAATTT
EX760517       --> AAGAACTCTCCGGCGAGACGACATTggc......................
EY894226       --> ..................................................

               2451   -   2501
UN23107        --> TTCTTT-CCGGCGAAGAAACTCTCTCTCTTT--TCTCTTCTTTCTATTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ..................................................
FD976302       <-- ..................................................
FD968352       <-- ..................................................
EX887941       <-- TTCTTT-TCCGCGA....................................
FD937681       <-- TTCTTTTCCGGCGAAGAAACTCc...........................
EY916801       <-- TTCTTT-CCGGCGAAGAAACTCTCTCTCTTT--TCTCTTCTTTCTATTGT
EY929322       <-- TTCTTTTCCGGCGAAGAAACTCTCTCTATTTCTTTTCTTCTTTCTATTGT
EX756783       <-- TTCTTT-ACGGCGAAGAAACTGTCTCTTTTT--Ttttctatgtctcgctc
EY898064       <-- TTCTTT-CCGGCGAAGAAACTCTCTCTCTTT--TCTCTTCTTTCTATTGT
EY939700       <-- ..................................................
FY444930       --> ..................................................
FD964075       --> ..................................................
FD980426       --> ..................................................
FD570385       --> ..................................................
EY935589       --> ..................................................
FD934244       --> ..................................................
EV540267       --> ..................................................
EY925786       --> TTCTTT............................................
EX760517       --> ..................................................
EY894226       --> ..................................................

               2501   -   2551
UN23107        --> CGCTCTGCTTCTTCGTGTGTGATTCAGACAAAGGCGAAACTAACTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960194       <-- ...............................................
FD976302       <-- ...............................................
FD968352       <-- ...............................................
EX887941       <-- ...............................................
FD937681       <-- ...............................................
EY916801       <-- CGCTCTGCTTCTTCGTGTGTGATTCAGACc.................
EY929322       <-- CGCTCTGTTTCTTCGTGTGTGATTCAGACAAAGGCGAAACTAACTCC
EX756783       <-- tgctttttcgtcc..................................
EY898064       <-- CGCTCTGCTTCTTCGTGTGTGATTCAGACAAAGGCGAAACTAACTCC
EY939700       <-- ...............................................
FY444930       --> ...............................................
FD964075       --> ...............................................
FD980426       --> ...............................................
FD570385       --> ...............................................
EY935589       --> ...............................................
FD934244       --> ...............................................
EV540267       --> ...............................................
EY925786       --> ...............................................
EX760517       --> ...............................................
EY894226       --> ...............................................