RadishBase

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Alignment for radish unigene UN23113

               1      -     51
UN23113        --> GATTCATAGCCCGAGTCCCAATCGCTGCAAAGGAGCCTACGCCCCGGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- ..................................................
FY428251       <-- ..................................................
EX899788       <-- ..................................................
FD539718       <-- ..................................................
EY909798       <-- ..................................................
FY444823       <-- ..................................................
EY937375       <-- ..................................................
EW729663       <-- ..................................................
FD950674       <-- ..................................................
FD540581       --> GATTCATAGCCCGAGTCCCAATCGCTGCAAAGGAGCCTACGCCCCGGGGA
EY913590       --> ..................................................
EW715821       --> ..................................................
FD954406       --> ..................................................

               51     -    101
UN23113        --> AGCTTCTAGGGTTTTCCTCTGATCATCTCCTCCTTCCCACCTGCTTCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- ..................................................
FY428251       <-- ..................................................
EX899788       <-- ..................................................
FD539718       <-- ..................................................
EY909798       <-- ..................................................
FY444823       <-- ..................................................
EY937375       <-- ..................................................
EW729663       <-- ..................................................
FD950674       <-- ..................................................
FD540581       --> AGCTTCTAGGGTTTTCCTCTGATCATCTCCTCCTTCCCACCTGCTTCAGA
EY913590       --> ..................................................
EW715821       --> ..................................................
FD954406       --> ..................................................

               101    -    151
UN23113        --> TGAAAGTCAAGGCTGCTGAGCATATTCTAAAAATCTGTTGAGCTGTTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- ..................................................
FY428251       <-- ..................................................
EX899788       <-- ..................................................
FD539718       <-- ..................................................
EY909798       <-- ..................................................
FY444823       <-- ..................................................
EY937375       <-- ..................................................
EW729663       <-- ..................................................
FD950674       <-- ..................................................
FD540581       --> TGAAAGTCAAGGCTGCTGAGCATATTCTAAAAATCTGTTGAGCTGTTTAA
EY913590       --> ..................................................
EW715821       --> ..................................................
FD954406       --> ..................................................

               151    -    201
UN23113        --> AAGAGTGTGAACCAAAAAATGGATGATGATAATGGGCTCGAGCTCAGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- ..................................................
FY428251       <-- ..................................................
EX899788       <-- ..................................................
FD539718       <-- ..................................................
EY909798       <-- ..................................................
FY444823       <-- ..................................................
EY937375       <-- ..................................................
EW729663       <-- ..................................................
FD950674       <-- ..................................................
FD540581       --> AAGAGTGTGAACCAAAAAATGGATGATGATAATGGGCTCGAGCTCAGCTT
EY913590       --> ..................................................
EW715821       --> ..................................................
FD954406       --> ..................................................

               201    -    251
UN23113        --> GGGTCTCTCTTGTGGAGGAGGATCAGTTAAGGGTAACATCACTAATAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- ..................................................
FY428251       <-- ..................................................
EX899788       <-- ..................................................
FD539718       <-- ..................................................
EY909798       <-- ..................................................
FY444823       <-- ..................................................
EY937375       <-- ..................................................
EW729663       <-- ..................................................
FD950674       <-- ..................................................
FD540581       --> GGGTCTCTCTTGTGGAGGAGGATCAGTTAAGGGTAACATCACTAATAACG
EY913590       --> ..................................................
EW715821       --> ..................................................
FD954406       --> ..................................................

               251    -    301
UN23113        --> CTGGAACCTCCTCCTCGGAGAAGCACATGGTAGAAGGAGGAGATAGAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- ..................................................
FY428251       <-- ..................................................
EX899788       <-- ..................................................
FD539718       <-- ..................................................
EY909798       <-- ..................................................
FY444823       <-- ..................................................
EY937375       <-- ..................................................
EW729663       <-- ..................................................
FD950674       <-- ..................................................
FD540581       --> CTGGAACCTCCTCCTCGGAGAAGCACATGGTAGAAGGAGGAGATAGAAGT
EY913590       --> ..................................................
EW715821       --> ..................................................
FD954406       --> ..................................................

               301    -    351
UN23113        --> GCTAAAGTGATTGATGACTTCAAGAACTTCCTTCATCCAACTTCTCAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- ..................................................
FY428251       <-- ..................................................
EX899788       <-- ..................................................
FD539718       <-- ..................................................
EY909798       <-- ..................................................
FY444823       <-- ..................................................
EY937375       <-- ..................................................
EW729663       <-- ..................................................
FD950674       <-- ..................................................
FD540581       --> GCTAAAGTGATTGATGACTTCAAGAACTTCCTTCATCCAACTTCTCAAAG
EY913590       --> ..................................................
EW715821       --> ..................................................
FD954406       --> ..................................................

               351    -    401
UN23113        --> ACAAGGTGAGCCGAGTTCTGGTTCTCAGAGTCAGAGAAGTGATTCTGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- ..................................................
FY428251       <-- ..................................................
EX899788       <-- ..................................................
FD539718       <-- ..................................................
EY909798       <-- ..................................................
FY444823       <-- ..................................................
EY937375       <-- ..................................................
EW729663       <-- ..................................................
FD950674       <-- ..................................................
FD540581       --> ACAAGGTGAGCCGAGTTCTGGTTCTCAGAGTCAGAGAAGTGATTCTGGTC
EY913590       --> ..................................................
EW715821       --> ..................................................
FD954406       --> ..................................................

               401    -    451
UN23113        --> AACAACAACAACTACCTCCACAGAATTTCTTCAATGATCTCTCCAAGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- ..................................................
FY428251       <-- ..................................................
EX899788       <-- ..................................................
FD539718       <-- ..................................................
EY909798       <-- ..................................................
FY444823       <-- ..................................................
EY937375       <-- ..................................................
EW729663       <-- ..................................................
FD950674       <-- ..................................................
FD540581       --> AACAACAACAACTACCTCCACAGAATTTCTTCAATGATCTCTCCAAGGCT
EY913590       --> ..................................................
EW715821       --> ..................................................
FD954406       --> ..................................................

               451    -    501
UN23113        --> CCTCCTACCTCTGACGCTGAAGCTTCTACGAAACCTTTGTGGGTGGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- ..................................................
FY428251       <-- ..................................................
EX899788       <-- ..................................................
FD539718       <-- ..................................................
EY909798       <-- ..................................................
FY444823       <-- ..................................................
EY937375       <-- ..................................................
EW729663       <-- ..................................................
FD950674       <-- ..................................................
FD540581       --> CCTCCTACCTCTGACGCTGAAGCTTCTACGAAACCTTTGTGGGTGGAGGA
EY913590       --> ..................................................
EW715821       --> ..................................................
FD954406       --> ..................................................

               501    -    551
UN23113        --> TGAGACAACACGACAACAAGCAGGAAACAAAAGAAAGTTTGGGTTCCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- ..................................................
FY428251       <-- ..................................................
EX899788       <-- ..................................................
FD539718       <-- ..................................................
EY909798       <-- ..................................................
FY444823       <-- ..................................................
EY937375       <-- ..................................................
EW729663       <-- ..................................................
FD950674       <-- ..................................................
FD540581       --> TGAGACAACACGACAACAAGCAGGAAACAAAAGAAAGTTTGGGTTCCAGG
EY913590       --> ..................................................
EW715821       --> ..................................................
FD954406       --> ..................................................

               551    -    601
UN23113        --> GGATGAACGATGAGAAGAAGAAAGAGATAGACTCCTCCTCACGTGTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- ..................................................
FY428251       <-- ..................................................
EX899788       <-- ..................................................
FD539718       <-- ..................................................
EY909798       <-- ..................................................
FY444823       <-- ..................................................
EY937375       <-- ..................................................
EW729663       <-- ..................................................
FD950674       <-- ..................................................
FD540581       --> GGATGAACGATGAGAAGAAGAAAGAGATAGACTCCTCCTCACGTGTTGTT
EY913590       --> ..................................................
EW715821       --> ..................................................
FD954406       --> ..................................................

               601    -    651
UN23113        --> GATCCGCACGAGAAGAAGACAAAAGCATCCCATGTTTCAAACGCTACTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- ..................................................
FY428251       <-- ..................................................
EX899788       <-- ..................................................
FD539718       <-- ..................................................
EY909798       <-- ..................................................
FY444823       <-- ..................................................
EY937375       <-- ..................................................
EW729663       <-- ..................................................
FD950674       <-- ..................................................
FD540581       --> GATCCGCACGAGAAGAAGACAAAAGCATCCCATGTTTCAAACGCTACTGA
EY913590       --> .......gCGAGAAGAAGACAAAAGCATCCCATGTTTCAAACGCTACTGA
EW715821       --> ..................................................
FD954406       --> ..................................................

               651    -    701
UN23113        --> TGAAGGATCAACAGCTGAAAATGAAGATGTAGCAGAATCTGAAGTAGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- ..................................................
FY428251       <-- ..................................................
EX899788       <-- ..................................................
FD539718       <-- ..................................................
EY909798       <-- ..................................................
FY444823       <-- ..................................................
EY937375       <-- ..................................................
EW729663       <-- ..................................................
FD950674       <-- ..................................................
FD540581       --> TGAA..............................................
EY913590       --> TGAAGGATCAACAGCTGAAAATGAAGATGTAGCAGAATCTGAAGTAGGTG
EW715821       --> .........AACAGCTGAAAACGAAGATGTAGCAGAATCTGAAGTAGGTG
FD954406       --> ..................................................

               701    -    751
UN23113        --> GTGGTGGTTCTTCTTCCAATCTAGCTAAGGAGGTGGTTCGTCCTAACGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- ..................................................
FY428251       <-- ..................................................
EX899788       <-- ..................................................
FD539718       <-- ..................................................
EY909798       <-- ..................................................
FY444823       <-- ..................................................
EY937375       <-- ..................................................
EW729663       <-- ..................................................
FD950674       <-- ..................................................
FD540581       --> ..................................................
EY913590       --> GTGGTGGTTCTTCCTCCAATCTAGCTAAGGAGGTGGTTCGTCCTAACGCT
EW715821       --> GTGGTGGTTCTTCTTCCAATCTAGCTAAGGAGGTGGCTCGTCCTAACGCT
FD954406       --> ..................................................

               751    -    801
UN23113        --> GATACAGTGGACAACTTAGCGGGCCAAAGGAAGAACAGCCATGGCGCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- ..................GCGGGCCAGAGGAAGAACAGCCATGGCGCTGA
FY428251       <-- .......................CCAAAGGAAGAACAGCCATGGCGCTGA
EX899788       <-- ..................................................
FD539718       <-- ..................................................
EY909798       <-- ..................................................
FY444823       <-- ..................................................
EY937375       <-- ..................................................
EW729663       <-- ..................................................
FD950674       <-- ..................................................
FD540581       --> ..................................................
EY913590       --> GATACAGTGGACAACTTAGCCGGTCAAAGGAAGAACAGCCATGGCGCTGA
EW715821       --> GATGCAATGGACAACTTAGCGGGCCAGAGGAAGAACAGCCATGGCGCTGA
FD954406       --> GATACAGTGGACAACTTAGCAGGCCAAAGGAAGAACAGCTATGGCGCTGA

               801    -    851
UN23113        --> AGAGTTTACTACAATGCGCAACATGAGTTACAACACCGTACCTTTCACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- AGAGTTTACTACAATGCGCAACATGAGTTACAACACCGTACCTTTCACTG
FY428251       <-- AGAGTTTACTACAATGCGCAACATGAGTTACAACACCGTACCTTTCACTG
EX899788       <-- ..................................................
FD539718       <-- ..................................................
EY909798       <-- ..................................................
FY444823       <-- ..................................................
EY937375       <-- ..................................................
EW729663       <-- ..................................................
FD950674       <-- ..................................................
FD540581       --> ..................................................
EY913590       --> AGAGTTTACTACAATGCGCAACATGAGTTACAACACCGTACCTTTCACTG
EW715821       --> AGAGTTTACTACAATGCGCAACATGAGTTACAACACCGTACCTTTCACTG
FD954406       --> AGAGTTTACTACAATGCGCAACATGAGTTACAACACCGTACCTTTCACTG

               851    -    901
UN23113        --> TTCATCCACAGAAACCCGTCACTGGTTTACCTTACTCCGCAAAAGAGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- TTCATCCACAGAAACCCGTCACTGGTTTACCTTACTCCGCAAAAGAGTCT
FY428251       <-- TTCATCCACAGAAACCCGTCACTGGTTTACCTTACTCCGCAAAAGAGTCT
EX899788       <-- ...................CACTGGTTTAC-TTACTCCGCAAAAGAGTCT
FD539718       <-- ...............................................TCT
EY909798       <-- ..................................................
FY444823       <-- ..................................................
EY937375       <-- ..................................................
EW729663       <-- ..................................................
FD950674       <-- ..................................................
FD540581       --> ..................................................
EY913590       --> TTCATCCACAGAAAGCTGTCACTGGTTTACCTTACTCGGCAAAAGAGTCT
EW715821       --> TTCATCCACAGAAACCCGTCACTGGTTTACCTTACTCCGCAAAAGAGTCT
FD954406       --> TTCATCCACAGAAAGCCGTCACTGGTT-ACCTTACTCCGCAAAAGAGCCT

               901    -    951
UN23113        --> GGACAACATGCAGCAGCTACAAGTCTAACACAGCTTACTGCTAATGCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- GGACAACATGCAGCAGCTACAAGTCTAACACAGCTTACTGCTAATGCTGG
FY428251       <-- GGACAACATGCAGCAGCTACAAGTCTAACACAGCTTACTGCTAATGCTGG
EX899788       <-- GGACAACATGCAGCAGCTACAAGTCTAACACAGCT-ACTGCTAATGCTGG
FD539718       <-- GGACAACATGCAGGAGCTACAAGTCTAACACAGCTTACTGCTAATGCTGG
EY909798       <-- .GACAAAATGCAGGAGCTGCAAGTTTAACACAGCTTACTGCTAATGCTGG
FY444823       <-- .GACAACATGCAGCAGCTACAAGTCTAACACAGCTTACTGCTAATGCTGG
EY937375       <-- ..................................................
EW729663       <-- ..................................................
FD950674       <-- ..................................................
FD540581       --> ..................................................
EY913590       --> GGACAAAATGCAGGAGCTGCAAGTTTAACACAGCTTACTGCTAATGCTGG
EW715821       --> GGACAACATGCAGCAGCTACAAGTCTAACACAGCTTACTGCTAATGCTGG
FD954406       --> GGACAACATGCAGCAGCTACAAGTCTAACACAGCCTACTGCTAATGCTGG

               951    -   1001
UN23113        --> GAATAATCTCCCAGTTATGTTCGGATACTCACCGGTTCAGCTCCCTATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- GAATAATCTCCCAGTTATGTTCGGATACTCACCGGTTCAGCTCCCTATGC
FY428251       <-- GAATAATCTCCCAGTTATGTTCGGATACTCACCGGTTCAGCTCCCTATGC
EX899788       <-- GAATAATCTCCCAGTTATGTTCGGATACTCACCGGTTCAGCTCCCTATGC
FD539718       <-- GAATAATCTCCCTGTTATGTTCGGATACTCACCGGTTCAGCTCCCTATGC
EY909798       <-- GAATAATCTCCCAGTTATGTTCGGATACTCACCGGTTCAGCTCCCTATGC
FY444823       <-- GAATAATCTCCCAGTTATGTTCGGATACTCACCGGTTCAGCTCCCTATGC
EY937375       <-- ..................................................
EW729663       <-- ..................................................
FD950674       <-- ..................................................
FD540581       --> ..................................................
EY913590       --> GAATAATCTCCCAGTTATGTTCGGATACTCACCGGTTCAGCTCCCTATGC
EW715821       --> GAATAATCTCCCAGTTATGTTCGGATACTCACCGGTTCAGCTCCCTATGC
FD954406       --> GAATAATCTCCCAGTTATGTTCGGATACTCACCGGTTCAGCTCCCTATGC

               1001   -   1051
UN23113        --> TGGATAAGGATGGCTCAGGCGGCATTGCTGGCCTTTCTCAATCTCCATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- TGGATAAGGATGGCTCAGGCGGCATTGCTGGCCTATCTCAATCTCCATTC  Raphanus sativus var. oleiformis
FY428251       <-- TGGATAAGGATGGCTCAGGCGGCATTGCTGGCCTATCTCAATCTCCATTC  Raphanus sativus cv GSK3-1
EX899788       <-- TAGATAAGGATGGCTCAGGCGGCATTGCTAGCCTTTCTCAATCTCCATTC  Raphanus sativus cv Early Scarlet Globe
FD539718       <-- TGGATAAGGATGGCTCAAGCAGCATTGCTGGCCTTTCTCAATCTCCATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909798       <-- TGGATAAGGATGGCTCAGGCGGCATTGCTGGCCTTTCTCAATCTCCATTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444823       <-- TGGATAAGGATGGCTCAGGCGGCATTGCTGGCCTATCTCAATCTCCATTC  Raphanus sativus cv GSK3-1
EY937375       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW729663       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD950674       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD540581       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY913590       --> TGGATAAGGATGGCTCAGGCGGCATTGCTGGCCTTTCTCAATCTCCATTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715821       --> TGGATAAGGATGGCTCAGGCGGCATTGCTGGCCTATCTCAATCTCCATTC  Raphanus sativus var. oleiformis
FD954406       --> TAGATAAGGATGGCTCAGGCGGCATTGCTAGCCTTTCTCAATCTCCATTC  Raphanus sativus cv Rat-Tail Radish #3870

               1051   -   1101
UN23113        --> GCTGCAAGAGGCCCATCAAACTCAGCTACGGCGAAAGGCGAGGGAAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- GCTGCAAGAGGCCCATCAAACTCAGCTACGGCGAAAGGCGAGGGAAAACA
FY428251       <-- GCTGCAAGAGGCCCATCAAACTCAGCTACGGCGAAAGGCGAGGGAAAACA
EX899788       <-- GCTGCAAGAGGCCCATCAAACTCAGCTACGGCGAAAGGCGAGGGAAAACA
FD539718       <-- GCTGCAAGAGGCCCATCAAACTCAGCTACGGCGAAAGGCGAGGGAAAACA
EY909798       <-- GCTGCAAGAGGCCCATCAAACTCAGCTACGGCGAAAGGCGAGGGAAAACA
FY444823       <-- GCTGCAAGAGGCCCATCAAACTCAGCTACGGCGAAAGGCGAGGGAAAACA
EY937375       <-- .................................AAAGGCGAGGGAAAACA
EW729663       <-- ..................................................
FD950674       <-- ..................................................
FD540581       --> ..................................................
EY913590       --> GCTGCAAGAGGCCCATCAAACTCAGCTACGGCGAAAGGCGAGGGAAAACA
EW715821       --> GCTGCAAGAGGCCCATCAAACTCAGCTACGGCGAAAGGCGAGGGAAAACA
FD954406       --> GCTGCAAGAGGCCCATCAAACTCAGCTACGGCGAAAGGCGAGGGAAAACA

               1101   -   1151
UN23113        --> GCCCGTTGCAGAAGAAGGCTCATCAGAGGATGCATCAGAACGACCATCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- GCCCGTTGCAGAAGAAGGCTCATCAGAGGATGCATCAGAACGACCATCCG  Raphanus sativus var. oleiformis
FY428251       <-- GCCCGTTGCAGAAGAAGGCTCATCAGAGGATGCATCAGAACGACCATCCG  Raphanus sativus cv GSK3-1
EX899788       <-- GCCCGTTGCAGAAGAAGGCTCCTCAGAGGATGCATCAGAAAGACCATCAG  Raphanus sativus cv Early Scarlet Globe
FD539718       <-- GCCTGTTGCAGAAGAAGGCTCATCAGAGGATGCATCAGAACTACCATCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909798       <-- GCCCGTTGCAGAAGAAAGCTCATCAGAGGATGCATCAGAACGACCATCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444823       <-- GCCCGTTGCAGAAGAAGGCTCATCAGAGGATGCATCAGAACGACCATCCG  Raphanus sativus cv GSK3-1
EY937375       <-- GCCCGTTGCAGAAGAAGGCTCCTCAGAGGATGCATCAGAAAGACCATCAG  Raphanus sativus cv Early Scarlet Globe
EW729663       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD950674       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD540581       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY913590       --> GCCCGTTGCAGAAGAAAGCTCATCAGAGGATGCATCAGAACGACCATCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715821       --> GCCCGTTGCAGAAGAAGGCTCATCAGAGGATGCATCAGAACGACCATCCG  Raphanus sativus var. oleiformis
FD954406       --> GCCCGTTGCAGAAGAAGGCTCCTCAGAGGATGCATCAGAAAGACCATCAG  Raphanus sativus cv Rat-Tail Radish #3870

               1151   -   1201
UN23113        --> GAGACAACAACAACAGTACTGCTTTCTCTTTCGACTTTTCCGCCATAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- GAGACAACAACAACAGTACTGCTTTCTCTTTCGACTTTTCCGCCATAAAA
FY428251       <-- GAGACAACAACAACAGTACTGCTTTCTCTTTCGACTTTTCCGCCATAAAA
EX899788       <-- GAGACAACAACAACAGTACTGCTTTCTCTTTCGACTTTTCCGCCATAAAA
FD539718       <-- GAGACAACAACAACAGTACTGCTTTCTCTTTCGACTTTTCCGCCATAAAA
EY909798       <-- GAGACAACAACAACAGTACTGCTTTCTCTTTCGACTTTTCCGACATAAAA
FY444823       <-- GAGACAACAACAACAGTACTGCTTTCTCTTTCGACTTTTCCGCCATAAAA
EY937375       <-- GAGACAACAACAACAGTACTGCTTTTTCTTTCGACTTTTCCGCCATAAAA
EW729663       <-- .............................TTCGACTTTTCCGCCATAAAA
FD950674       <-- ..................................................
FD540581       --> ..................................................
EY913590       --> GAGACAACAACAACAGTACTGCTTTCTCTTTCGACTTTTCCGACATAAAA
EW715821       --> GAGACAACAACAACAGTACTGCTTTCTCTTTCGACTTTTCCGCCATAAAA
FD954406       --> GAGACAACAACAACAGTACTGCTTTCTCTTTCGACTTTTCCGCCATAAAA

               1201   -   1251
UN23113        --> CCTGGAATGGCAGCGGATGTGAAGTTTGGAGGATCTGGTGCACGTCCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- CCTGGAATGGCAGCGGATGTGAAGTTTGGAGGATTTGGTGCACGTCCTAA
FY428251       <-- CCTGGAATGGCAGCGGATGTGAAGTTTGGAGGATCTGGTGCACGTCCTAA
EX899788       <-- CCTGGAATGGCAGCGGATGTGAAGTTTGGAGGATCTGGTGCACGTCCTAA
FD539718       <-- CCTGGAATGGCAGCGGATGTGAAGTTTGGAGGATCTGGTGCGCGTCCTAA
EY909798       <-- CCTGGAATGGCAGCGGATGTGAAGTTTGGAGGATCTGGTGCACGTCCTAA
FY444823       <-- CCTGGAATGGCAGCGGATGTGAAGTTTGGAGGATCTGGTGCACGTCCTAA
EY937375       <-- CCTGGAATGGCAGCGGATGTGAAGTTTGGAGGATTTGGTGCACGTCCTAA
EW729663       <-- CCTGGAATGGCAGCGGATGTGAAGTTTGGAGGATTTGGTGCACGTCCTAA
FD950674       <-- ..................................................
FD540581       --> ..................................................
EY913590       --> CCTGGAATGGCAGCGGATGTGAAGTTTGGAGGATCTGGTGCACGTCCTAA
EW715821       --> CCTGGAATGGCAGCGGATGTGAAGTTTGGAGGATCTGGTGCACGTCCTAA
FD954406       --> CCTGGAATGGCAGCGGATGTGAAGTTTGGAGGATCTGGTGCACGTCCTAA

               1251   -   1301
UN23113        --> CCTGCCCTGGGTCTCAACCACTGGCTCAGGCCCGCACGGTCGAACAATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- CCTGCCCTGGGTCTCAACCACTGGCTCAGGCCCGCACGGTCGAACAATCT  Raphanus sativus var. oleiformis
FY428251       <-- CCTGCCCTGGGTCTCAACCACTGGCTCAGGCCCGCACGGTCGAACAATCT  Raphanus sativus cv GSK3-1
EX899788       <-- CCTGCCCTGGGTCTCAACCACTGGCTCAGGCCCGCACGGTCGAACAATCT  Raphanus sativus cv Early Scarlet Globe
FD539718       <-- CCTGCCCTGGGTCTCAACCACTGGTTCAGGCCCGCACGGTCGAACAATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909798       <-- CCTGCCCTGGGTCTCAACCACTGGTTCAGGCCCGCACGGTCGAACAATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444823       <-- CCTGCCCTGGGTCTCAACCACTGGCTCAGGCCCGCACGGTCGAACAATCT  Raphanus sativus cv GSK3-1
EY937375       <-- CCTGCCCTGGGTTTCAACCACTGGCTCAGGCCCGCACGGTCGAGCAATTT  Raphanus sativus cv Early Scarlet Globe
EW729663       <-- CCTGCCCTGGGTTTCAACCACTGGTTCAGGCCCGCACGGTCGAACAATTT  Raphanus sativus cv Early Scarlet Globe
FD950674       <-- ............................................CAATCT  Raphanus sativus cv Rat-Tail Radish #3870
FD540581       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY913590       --> CCTGCCCTGGGTCTCAACCACTGGTTCAG-CCCGCACGGTCGA-CAATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715821       --> CCTGCCCTGGGTCTCAACCACTGGCTCAGGCCCGCACGGTCGAACAATCT  Raphanus sativus var. oleiformis
FD954406       --> CCTGCCCTGGGTCTCAACCACTGGCTCAGGCCCGCACGGTCGAACAATCT  Raphanus sativus cv Rat-Tail Radish #3870

               1301   -   1351
UN23113        --> CGGGTGTTACATACCGGTACAATGCAAACCAGATCAAAATAGTTTGCGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- CGGGTGTTACATACCGGTACAATGCAAACCAGATCAAAATGGTTTGCGCT
FY428251       <-- CGGGTGTTACATACCGGTACAATGCAAACCAGATCAAAATAGTTTGCGCT
EX899788       <-- CGGGTGTTACATACCGGTACAATGCAAACCAGATCAAAATAGTTTGCGCT
FD539718       <-- CGGGTGTTACATATCGGTACAATGCAAACCAGATCAAAATCGTTTGCGCT
EY909798       <-- CGGGTGTTACATACCGGTACAATGCAAACCAGATCAAAATCGTTTGCGCT
FY444823       <-- CGGGTGTTACATACCGGTACAATGCAAACCAGATCAAAATAGTTTGCGCT
EY937375       <-- CGGGTGTTACATACCGGTACAATGCAAACCAGATCAAAATAGTTTGCGCT
EW729663       <-- CGGGTGTTACATACCGGTACAATGCAAACCAGATCAAAATAGTTTGCGCT
FD950674       <-- CGGGTGTTACATACCGGTACAATGCAAACCAGATCAAAATAGTTTGCGCT
FD540581       --> ..................................................
EY913590       --> CGGGTGTTACATACCGGTACA-TGCAAAC-AGATCAAA-TCGTTTGCGCT
EW715821       --> CGGGTGTTACATACCGGTACAATGCAAACCAGATCAAAATGGTTTGCGCT
FD954406       --> CGGGTGTTACATACCGGTACAATGCAAACCAGATCAAAATAGTTTGCGCT

               1351   -   1401
UN23113        --> TGTCACGGCTCACACATGTCGCCGGAGGAGTTTGTCAGGCATGCAAGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- TGTCACGGCTCACACATGTCGCCGGAGGAGTTTGTCAGGCATGCAAGCGA
FY428251       <-- TGTCACGGCTCACACATGTCGCCGGAGGAGTTTGTCAGGCATGCAAGCGA
EX899788       <-- TGTCACGGCTCACACATGTCGCCGGAGGAGTTTGTCAGGCATGCAAGCGA
FD539718       <-- TGTCACGGCTCACACATGTCGCCCGAGGAGTTTGTCAGGCATGCAAGCGA
EY909798       <-- TGTCACGGCTCACACATGTCGCCCGAGGAGTTTGTCAGGCATGCAAGCGA
FY444823       <-- TGTCACGGCTCACACATGTCGCCGGAGGAGTTTGTCAGGCATGCAAGCGA
EY937375       <-- TGTCACGGCTCACACATGTCGCCGGAGGAGTTTGTCAGGCATGCAAGCGA
EW729663       <-- TGTCACGGCTCACACATGTCGCCGGAGGAGTTTGTCAGGCATGCAAGCGA
FD950674       <-- TGTCACGGCTCACACATGTCGCCGGAGGAGTTTGTCAGGCATGCAAGCGA
FD540581       --> ..................................................
EY913590       --> TGTCACGGCTCACACATGTCGCCCGAGGAGTTTGTCAG-CATGCAAGCGA
EW715821       --> TGTCACGGCTCACACATGTCGCCGGAGGAGTTTGTCACGCATGCAAGCGA
FD954406       --> TGTCACGGCTCACACATGTCGCCGGAGGAGTTTGT...............

               1401   -   1451
UN23113        --> GGAGTATGTTAGCCCTGAGTCATCTGTAGGAATGACGGCTGCCTCGGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- GGAGTATGTTAGCCCTGAGTCATCTGTAGGAATGACGGCTGCCTCGGCTC
FY428251       <-- GGAGTATGTTAGCCCTGAGTCATCTGTAGGAATGACGGCTGCCTCGGCTC
EX899788       <-- GGAGTATGTTAGCCCTGAGTCATCTGTAGGAATGACGGCTGCCTCGGCTC
FD539718       <-- GGAGTATGTTAGCCCTGAGTCTTCTGTAGGAATGACGGCTGCCTCGGCTC
EY909798       <-- GGAGTATGTTAGCCCTGAGTCTTCTGTAGGAATGACGGCTGCCTCGGCTC
FY444823       <-- GGAGTATGTTAGCCCTGAGTCATCTGTAGGAATGACGGCTGCCTCGGCTC
EY937375       <-- GGAGTATGTTAGCCCTGAGTCATCTGTAGGAATGACGGCTGCCTCGGCTC
EW729663       <-- GGAGTATGTTAGCCCTGAGTCATCTGTAGGAATGACGGCTGCCTCGGCTC
FD950674       <-- GGAGTATGTTAGCCCTGAGTCATCTGTAGGAATGACGGCTGCCTCGGCTC
FD540581       --> ..................................................
EY913590       --> GGA...............................................
EW715821       --> GGAGTATGTTAGCCCTGAGTCATCTGTAG-AATGACG-CTGCCTCGGCTC
FD954406       --> ..................................................

               1451   -   1501
UN23113        --> ATACCTGAAAAGTCGCCGGAGAAGTGTCTTATATCG-TTGTAAACAAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- ATACCTGAAAAGTCGCCGGAGAAGTGTCTTATATCG-TTGTAAACAAATG
FY428251       <-- ATACCTGAAAAGTCGCCGGAGAAGTGTCTTATATCG-TTGTAAACAAATG
EX899788       <-- ATACCTGAAAAGTCGCCGGAGAAGTGTCTTATATCG-TTGTAAACAAATG
FD539718       <-- ATACCTGAAAAGTCGCCGGAGAAGTGTCTTATATCGGTTGTAAACAAATG
EY909798       <-- ATACCTGAAAAGTCGCCGGAGAAGTGTCTTATATCG-TTGTAAACAAATG
FY444823       <-- ATACCTGAAAAGTCGCCGGAGAAGTGTCTTATATCG-TTGTAAACAAATG
EY937375       <-- ATACCTGAAAAGTCGCCGGAGAAGTGTCTTATATCG-TTGTAAACAAATG
EW729663       <-- ATACCTGAAAAGTCGCCGGAGAAGTGTTTTATATCG-TTGTAAACAAATG
FD950674       <-- ATACCTGAAAAGCCGCCGGAGAAGTGTCTTATATCG-TTGTAAACAAATG
FD540581       --> ..................................................
EY913590       --> ..................................................
EW715821       --> ATACCTGAAAgtc.....................................
FD954406       --> ..................................................

               1501   -   1551
UN23113        --> GAACAAGTGGTTTGTAATGAGTTTCTTATGGGAAGGTGTACTCTTTTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- GAACAAGTGGTTTGTAATGAGTTTCTTATGGGAAGGTGTACTCTTTTAAG
FY428251       <-- GAACAAGTGGTTTGTAATGAGTTTCTTATGGGAAGGTGTACTCTTTTAAG
EX899788       <-- GAACAAGTGGTTTGTAATGAGTTTCTTATGGGAAGGTGTACTCTTTTAAG
FD539718       <-- GAACAAGTGGTTTGTAATGAGTTTCTTATGGGAAGGTGTACTCTTT-AAG
EY909798       <-- AAACAAGTGGTTTGTAATGAGTTTCTTATGGGAAGGTGTACTCTTT-AAG
FY444823       <-- GAACAAGTGGTTTGTAATGAGTTTCTTATGGGAAGGTGTACTCTTTTAAG
EY937375       <-- GAACAAGTGGTTTGTAATGAGTTTTTTATGGGAAGGTGTACTTTTTTAAG
EW729663       <-- GAACAAGTGGTTTGTAATGAGTTTTTTATGGGAAGGTGTACTCTTTTAAG
FD950674       <-- GAACAAGTGGTTTGTAATGAGTTTCTTATGGGAAGGTGTACTCTTTTAAG
FD540581       --> ..................................................
EY913590       --> ..................................................
EW715821       --> ..................................................
FD954406       --> ..................................................

               1551   -   1601
UN23113        --> GCCAAAGTTTTATTGGAGCTTCCCACTATGTTAGTGTAATCTCTCTGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- GCCAAAGTTTTATTG...................................
FY428251       <-- GCCAAAGTTTTATTGGAGCTTCCCACTATGTTAGTGTAATCTCTCTGTTT
EX899788       <-- GCCAAAGTTTTATTGGAGCTTCCCACTATGTTAGTGTAATCTCTCTGTTT
FD539718       <-- GCCAAAGTTTTATTGGAGCTTCCCACTATGTTAGTGTAATCTCTCTGTTT
EY909798       <-- GCCAAAGTTTTATTGGAGCTTCCCACTATGTTACTGTAATCTCTCTGTT.
FY444823       <-- GCCAAAGTTTTATTGGAGCTTCCCACTATGTTAGTGTAATCTCTCTGTTT
EY937375       <-- GCC...............................................
EW729663       <-- GCCAAAGTTTTATTGGAGCTTCCCACTATGTTAGTATAATCTCTCTGTTT
FD950674       <-- GCCAAAGTTTTATTGGAGCTTCCCACTATGTTAGTGTAATCTCTCTGTTT
FD540581       --> ..................................................
EY913590       --> ..................................................
EW715821       --> ..................................................
FD954406       --> ..................................................

               1601   -   1651
UN23113        --> CTTTTGTTCCTCTTTTCAGCTTTTGTCACTTCACTTTTGTGTATTACCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- ..................................................
FY428251       <-- CTTTTGTTCCTCTTTTCAGCTTTTGTCACTTCACTTTTGTGTATTACCAT
EX899788       <-- CTTTTGTTCCTCTTTTCAGCTTTTGTCACTTCACTTTTGTGTATT.....
FD539718       <-- CTTTTGTTCTTCTTTTCAGCTTTTATCACTT---CATTGTGTATCACCAT
EY909798       <-- ..................................................
FY444823       <-- CTTTTGTTCCTCTTTTCAGCTTTTGTCACTTCACTTTTGTGTATTACCAT
EY937375       <-- ..................................................
EW729663       <-- CTTTTGTTCCTCTTTTCAGCTTTTGTCACTTCACTTTTGTGTATTACCAT
FD950674       <-- CTTTTGTTCCTCTTTTTAGCTTTTGTCACTTCACTTTTGTGTATT.....
FD540581       --> ..................................................
EY913590       --> ..................................................
EW715821       --> ..................................................
FD954406       --> ..................................................

               1651   -   1701
UN23113        --> TTAGTTTTGTATGATTCTCTTTA-TTTTGTTTTTGGGTTCAAAACTTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- ..................................................
FY428251       <-- TTAGTTTTGTATGATctct...............................
EX899788       <-- ..................................................
FD539718       <-- TTAGTTTTGTATGATTCTCTCTA-TTTTGTTT..................
EY909798       <-- ..................................................
FY444823       <-- TTAGTTTTGTATGATTCTCTATAGTTTTGTTTTTGGGTTCAAAACTTCAA
EY937375       <-- ..................................................
EW729663       <-- TTAGTTTTGTATGATTCTCTTTA-TTTTGTTTTTGGGTTCAAAACTTCAA
FD950674       <-- ..................................................
FD540581       --> ..................................................
EY913590       --> ..................................................
EW715821       --> ..................................................
FD954406       --> ..................................................

               1701   -   1751
UN23113        --> ATAAAT-TTTTGAGAATTTAGTTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720322       <-- ..........................
FY428251       <-- ..........................
EX899788       <-- ..........................
FD539718       <-- ..........................
EY909798       <-- ..........................
FY444823       <-- ATAAAT-TTCTGAGAAT.........
EY937375       <-- ..........................
EW729663       <-- ATAAATATTTTGAGAATTTAGTTTAG
FD950674       <-- ..........................
FD540581       --> ..........................
EY913590       --> ..........................
EW715821       --> ..........................
FD954406       --> ..........................