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Alignment for radish unigene UN23136

               1      -     51
UN23136        --> GGGAATCTTTTTTGGTTTCAAGAAACGTATCAACAATGGCTGACGGTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542759       <-- ..................................................
EX893279       <-- ..................................................
FD966557       <-- ..................................................
EV542142       <-- ..................................................
FD976925       <-- ..................................................
EY893186       <-- ..................................................
FD583696       <-- ..................................................
FD942820       <-- ..................................................
EX899692       <-- ..................................................
EV541304       <-- ..................................................
FD547742       <-- ..................................................
FD568036       <-- ..................................................
FD539919       <-- ..................................................
FD564586       --> GGGAATCTTTTCTGGTTTCAAGAAACGTATCAACAATGGCTGACGGTGAA
FD579771       --> .GGAATCTTTTCTGGTTTCAAGAAACGTATCAACAATGGCTGACGGTGAA
EX895645       --> .......TTTTTTGGTTTCAAGAAACATATCAACAATGGCTGACGGTGAA
EX896865       --> .......TTTTTTGGTTTCAAGAAACATATCAACAATGGCTGACGGTGAA
EY896701       --> .......TTTTTTGGTTTCAAGAAACGTATCAACAATGGCTGACGGTGAA
FD543571       --> .......TTTTTTGGCTTCGAGAAACGTATCAACAATGGCTGACGGTGAA
FD946761       --> .......TTTTTTGGTTTCAAGAAACATATCAACAATGGCTGACGGTGAA
FD970117       --> .......TTTTTTGGTTTCGAGAAACGTATCAACAATGGCTGACGGTGAA
FD981146       --> .......TTTTTTGGTTTCAAGAAACGTATCAACAATGGCTGACGGTAAA
EV528677       --> .............GGTTTCAAGAAACGTATCAACAATGGCTGACAGTGAA
EY947373       --> .............................ggAACAATGGCTGACGGTGAA
FD564274       --> ...............................gggAATGGCTGACGGTGAA
EV536969       --> ......................................GCTGACGGTGAA
EV538043       --> ..................................................
FD544270       --> ..................................................
EX889584       --> ..................................................
EV538830       --> ..................................................
FD542732       --> ..................................................
EW714932       --> ..................................................

               51     -    101
UN23136        --> GACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGGTTAAAGCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542759       <-- ..................................................
EX893279       <-- ..................................................
FD966557       <-- ..................................................
EV542142       <-- ..................................................
FD976925       <-- ..................................................
EY893186       <-- ..................................................
FD583696       <-- ..................................................
FD942820       <-- ..................................................
EX899692       <-- ..................................................
EV541304       <-- ..................................................
FD547742       <-- ..................................................
FD568036       <-- ..................................................
FD539919       <-- ..................................................
FD564586       --> GACATTCAACCTCTTGTTTGCGACAACGGAACTGGAATGGTTAAAGCTGG
FD579771       --> GACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGGTTAAAGCTGG
EX895645       --> GACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGGTTAAAGCTGG
EX896865       --> GACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGGTCAAAGCTGG
EY896701       --> GACATTCAACCTCTTGTCTGCGACAATGGAACTGGAATGGTTAAAGCTGG
FD543571       --> GACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGGTTAAAGCTGG
FD946761       --> GACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGGTTAAAGCTGG
FD970117       --> GACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGGTTAAAGCTGG
FD981146       --> GACATTCAACCTCTTGTCTGCGACAATGGAACTGGAATGGTTAAAGCTGG
EV528677       --> GACATTCAACCTCTTGTCTGCGACAATGGAACTGGAATGGTTAAAGCTGG
EY947373       --> GACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGGTTAAAGCTGG
FD564274       --> GACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGGTTAAAGCTGG
EV536969       --> GACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGATTAAAGCTGG
EV538043       --> ................TTTGCGACAATGGAACTGGAATGGTTAAAGCTGG
FD544270       --> ..................................................
EX889584       --> ..................................................
EV538830       --> ..................................................
FD542732       --> ..................................................
EW714932       --> ..................................................

               101    -    151
UN23136        --> TTTTGCTGGGGATGATGCACCTCGAGCTGTGTTCCCCAGCATTGTTGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542759       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893279       <-- ..................................................  Raphanus sativus var. oleiformis
FD966557       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542142       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976925       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893186       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583696       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD942820       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX899692       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV541304       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547742       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD568036       <-- ..................................................  Raphanus sativus var. oleiformis
FD539919       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564586       --> TTTTGCTGGGGATGATGCACCTCGAGCTGTGTTCCCCAGCATTGTTGGTC  Raphanus sativus var. oleiformis
FD579771       --> TTTTGCTGGGGATGATGCACCTCGAGCTGTGTTCCCCAGCATTGTTGGTC  Raphanus sativus cv Rat-Tail Radish #3870
EX895645       --> TTTTGCTGGGGATGATGCACCTCGAGCTGTGTTCCCCAGCATTGTTGGTC  Raphanus sativus cv Early Scarlet Globe
EX896865       --> TTTTGCTGGGGATGATGCACCTCGAGCTGTGTTCCCCAGCATTGTTGGTC  Raphanus sativus cv Early Scarlet Globe
EY896701       --> TTTTGCTGGGGATGATGCACCTCGAGCTGTGTTCCCCAGCATCGTGGGTC  Raphanus raphanistrum subsp. maritimus
FD543571       --> TTTTGCTGGGGATGATGCACCTCGAGCCGTGTTCCCCAGCATCGTGGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946761       --> TTTTGCTGGGGATGATGCACCTCGAGCTGTGTTCCCCAGCATTGTTGGTC  Raphanus sativus cv Early Scarlet Globe
FD970117       --> TTTTGCTGGGGATGATGCACCTCGAGCCGTGTTCCCCAGCATCGTGGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981146       --> TTTTGCTGGGGATGATGCACCTCGAGCTGTGTTCCCCAGCATCGTGGGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528677       --> TTTTGCTGGGGATGATGCACCTCGAGCTGTGTTCCCCAGCATCGTGGGTC  Raphanus raphanistrum subsp. maritimus
EY947373       --> TTTTGCTGGGGATGATGCACCTCGAGCTGTGTTCCCCAGCATTGTTGGTC  Raphanus sativus cv Rat-Tail Radish #3870
FD564274       --> TTTTGCTGGGGATGATGCACCTCGAGCTGTGTTCCCCAGCATTGTTGGTC  Raphanus sativus var. oleiformis
EV536969       --> TTTTGCTGGGGATGATGCACCTCGAGCCGTGTTCCCCAGCATCGTGGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538043       --> TTTTGCTGGGGATG---CACCTCGATCCGTGTTCCCCAGCATCGTGGGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544270       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889584       --> ..................................................  Raphanus sativus var. oleiformis
EV538830       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542732       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714932       --> ..................................................  Raphanus sativus var. oleiformis

               151    -    201
UN23136        --> GTCCACGTCACACCGGTGTGATGGTTGGAATGGGACAAAAGGATGCGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542759       <-- ..................................................
EX893279       <-- ..................................................
FD966557       <-- ..................................................
EV542142       <-- ..................................................
FD976925       <-- ..................................................
EY893186       <-- ..................................................
FD583696       <-- ..................................................
FD942820       <-- ..................................................
EX899692       <-- ..................................................
EV541304       <-- ..................................................
FD547742       <-- ..................................................
FD568036       <-- ..................................................
FD539919       <-- ..................................................
FD564586       --> GTCCACGTCACACCGGTGTGATGGTTGGAATGGGACAAAAGGATGCGTAC
FD579771       --> GTCCACGTCACACCGGTGTGATGGTTGGAATGGGACAAAAGGATGCGTAC
EX895645       --> GTCCACGTCACACCGGTGTGATGGTTGGAATGGGACAAAAGGATGCGTAC
EX896865       --> GTCCACGTCACACCGGTGTGATGGTTGGAATGGGACAAAAGGATGCGTAC
EY896701       --> GTCCACGTCACACCGGTGTGATGGTTGGAATGGGACAAAAGGATGCGTAC
FD543571       --> GTCCACGTCACACCGGTGTGATGGTTGGAATGGGACAAAAGGATGCGTAC
FD946761       --> GTCCACGTCACACCGGTGTGATGGTTGGAATGGGACAAAAGGATGCGTAC
FD970117       --> GTCCACGTCACACCGGTGTGATGGTTGGAATGGGACAAAAGGATGCGTAC
FD981146       --> GTCCACGTCACACCGGTGTGATGGTTGGAATGGGACAAAAGGATGCGTAC
EV528677       --> GTCCACGTCACACCGGTGTGATGGTTGGAATGGGACAAAAGGATGCGTAC
EY947373       --> GTCCACGTCACACCGGTGTAATGGTTGGAATGGGACAAAAGGATGCGTAC
FD564274       --> GTCCACGTCACACCGGTGTGATGGTTGGAATGGGACAAAAGGATGCGTAC
EV536969       --> GTCCACGTCACACCGGTGTGATGGTTGGAATGGGACAAAAGGATGCGTAC
EV538043       --> GTCCACGTCACACCGGTGTGATGGTTGGAATGGGACAAAAGGATGCGTAC
FD544270       --> ..................................................
EX889584       --> ..................................................
EV538830       --> ..................................................
FD542732       --> ..................................................
EW714932       --> ..................................................

               201    -    251
UN23136        --> GTTGGTGATGAAGCTCAATCCAAACGTGGTATTCTAACTCTCAAGTACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542759       <-- ..................................................
EX893279       <-- ..................................................
FD966557       <-- ..................................................
EV542142       <-- ..................................................
FD976925       <-- ..................................................
EY893186       <-- ..................................................
FD583696       <-- ..................................................
FD942820       <-- ..................................................
EX899692       <-- ..................................................
EV541304       <-- ..................................................
FD547742       <-- ..................................................
FD568036       <-- ..................................................
FD539919       <-- ..................................................
FD564586       --> GTTGGTGATGAAGCTCAATCCAAACGTGGTATTCTAACTCTCAAGTACCC
FD579771       --> GTTGGTGATGAAGCTCAATCCAAACGTGGTATTCTAACTCTCAAGTACCC
EX895645       --> GTTGGTGATGAAGCTCAATCCAAACGTGGTATTCTAACTCTCAAGTACCC
EX896865       --> GTTGGTGATGAAGCTCAATCCAAACGTGGTATTCTAACTCTCAAGTACCC
EY896701       --> GTTGGTGATGAAGCTCAATCCAAACTTGGTATTCTAACTCTCAAGTACCC
FD543571       --> GTTGGTGATGAAGCTCAATCCAAACGTGGTATTCTAACTCTCAAGTACCC
FD946761       --> GTTGGTGATGAAGCTCAATCCAAACGTGGTATTCTAACTCTCAAGTACCC
FD970117       --> GTGGGTGATGAAGCTCAATCCAAACGTGGTATTCTAACTCTCAAGTACCC
FD981146       --> GTTGGTGATGAAGCTCAATCCAAACGTGGTATTCTAACTCTCAAGTACCC
EV528677       --> GTTGGTGATGAAGCTCAATCCAAACGTGGTATTCTAACTCTCAAGTACCC
EY947373       --> GTTGGTGATGAAGCTCAATCCAAACGTGGTATTCTAACTCTCAAGTACCC
FD564274       --> GTTGGTGATGAAGCTCAATCCAAACGTGGTATTCTAACTCTCAAGTACCC
EV536969       --> GT----GATGAAGCTCAATCCAAACGTGGTATTCTAACTCTCAAGTACCC
EV538043       --> GTTGGTGATGAAGCTCAATCCAAACGTGGTATTCTAACTCTCAAGTACCC
FD544270       --> ...GGTGATGAAGCTCAATCCAAACGTGGTATTCTAACTCTCAAGTACCC
EX889584       --> ..................................................
EV538830       --> ..................................................
FD542732       --> ..................................................
EW714932       --> ..................................................

               251    -    301
UN23136        --> TATTGAGCACGGTATTGTCAACAACTGGGACGACATGGAGAAGATCTGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542759       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893279       <-- ..................................................  Raphanus sativus var. oleiformis
FD966557       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542142       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976925       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893186       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583696       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD942820       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX899692       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV541304       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547742       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD568036       <-- ..................................................  Raphanus sativus var. oleiformis
FD539919       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564586       --> TATTGAGCACGGTATTGTCAACAACTGGGACGACATGGAGAAGATCTGGC  Raphanus sativus var. oleiformis
FD579771       --> TATTGAGCACGGTATTGTCAACAACTGGGACGACATGGAGAAGATCTGGC  Raphanus sativus cv Rat-Tail Radish #3870
EX895645       --> TATTGAGCACGGTATTGTCAACAACTGGGACGACATGGAGAAGATCTGGC  Raphanus sativus cv Early Scarlet Globe
EX896865       --> TATTGAGCACGGTATTGTCAACAACTGGGACGACATGGAGAAGATCTGGC  Raphanus sativus cv Early Scarlet Globe
EY896701       --> TATTGAGCACGGTATTGTCAACAACTGGGACGACATGGAGAAGATCTGGC  Raphanus raphanistrum subsp. maritimus
FD543571       --> TATTGAGCATGGTATTGTCAACAGCTGGGACGACATGGAGAAGATCTGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946761       --> TATTGAGCACGGTATTGTCAACAACTGGGACGACATGGAGAAGATCTGGC  Raphanus sativus cv Early Scarlet Globe
FD970117       --> TATTGAGCATGGTATTGTCAACAACTGGGACGACATGGAGAAGATCTGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981146       --> TATTGAGCACGGTATTGTCAACAACTGGGACGACATGGAGAAGATCTGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528677       --> TATTGAGCACGGTATTGTCAACAACTGGGACGACGTGGAGAAGATCTGGC  Raphanus raphanistrum subsp. maritimus
EY947373       --> TATTGAGCACGGTATTGTCAACAACTGGGACGACATGGAGAAGATCTGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD564274       --> TATTGAGCACGGTATTGTCAACAACTGGGACGACATGGAGAAGATCTGGC  Raphanus sativus var. oleiformis
EV536969       --> TATTGAGCATGGTATTGTCAACAACTGGGACGACATGGAGAAGATCTGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538043       --> TATTGAGCATGGTATTGTCAACAACTGGGACGACATGGAGAAGATCTGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544270       --> TATTGAGCATGGTATTGTCAACAACTGGGACGACATGGAGAAGATCTGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889584       --> .....................................GAGAAGATCTGGC  Raphanus sativus var. oleiformis
EV538830       --> ............................................gCTGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542732       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714932       --> ..................................................  Raphanus sativus var. oleiformis

               301    -    351
UN23136        --> ATCACACTTTCTACAACGAGCTCCGTGTTGCACCCGAGGAGCATCCCGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542759       <-- ..................................................
EX893279       <-- ..................................................
FD966557       <-- ..................................................
EV542142       <-- ..................................................
FD976925       <-- ..................................................
EY893186       <-- ..................................................
FD583696       <-- ..................................................
FD942820       <-- ..................................................
EX899692       <-- ..................................................
EV541304       <-- ..................................................
FD547742       <-- ..................................................
FD568036       <-- ..................................................
FD539919       <-- ..................................................
FD564586       --> ATCACACTTTCTACAACGAGCTCCGTGTTGCACCCGAGGAGCATCCCGTT
FD579771       --> ATCACACTTTCTACAACGAGCTCCGTGTTGCACCCGAGGAGCATCCCGTT
EX895645       --> ATCACACTTTCTACAACGAGCTCCGTGTTGCACCCGAGGAGCATCCCGTT
EX896865       --> ATCACACTTTCTACAACGAGCTCCGTGTTGCACCCGAGGAGCATCCCGTT
EY896701       --> ATCACACTTTCTACAACGAGCTCCGTGTTGCACCCGAGGAGCATCCCGTT
FD543571       --> ATCACACTTTCTACAACGAGCTCCGTGTTGCACCCGAGGAGCATCCCGTT
FD946761       --> ATCACACTTTCTACAACGAGCTCCGTGTTGCACCCGAGGAGCATCCCGTT
FD970117       --> ATCACACTTTCTACAACGAGCTCCGTGTTGCACCCGAGGAGCATCCCGTT
FD981146       --> ATCACACTTTCTACAACGAGCTCCGTGTTGCACCCGAGGAGCACCCCGTT
EV528677       --> ATCACACTTTCTACAACGAGCTCCGTGTTGCACCCGAGGAGCATCCCGTT
EY947373       --> ATCACACTTTCTACAACGAGCTCCGTGTTGCACCCGAGGAGCATCCCGTT
FD564274       --> ATCACACTTTCTACAACGAGCTCCGTGTTGCACCCGAGGAGCATCCCGTT
EV536969       --> ATCACACTTTCTACAACGAGCTCCGTGTTGCACCCGAGGAGCATCCCGTT
EV538043       --> ATCACACTTTCTACAACGAGCTCTGTGTTGCACCCGAGGAGCATCCCGTT
FD544270       --> ATCACACTTTCTACAACGAGCTCCGTGTTGCACCCGAGGAGCATCCCGTT
EX889584       --> ATCACACTTTCTACAACGAGCTCCGTGTTGCACCCGAGGAGCATCCCGTT
EV538830       --> ATCACACTTTCTACAACGAGCTCCGTGTTGCACCCGAGGAGCATCCCGTT
FD542732       --> ..................................................
EW714932       --> ..................................................

               351    -    401
UN23136        --> CTCCTCACGGAAGCACCTCTCAACCCTAAAGCTAACCGTGAGAAGATGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542759       <-- ..................................................
EX893279       <-- ..................................................
FD966557       <-- ..................................................
EV542142       <-- ..................................................
FD976925       <-- ..................................................
EY893186       <-- ..................................................
FD583696       <-- ..................................................
FD942820       <-- ..................................................
EX899692       <-- ..................................................
EV541304       <-- ..................................................
FD547742       <-- ..................................................
FD568036       <-- ..................................................
FD539919       <-- ..................................................
FD564586       --> CTCCTCACGGAAGCACCTCTCAACCCTAAAGCTAACCGTGAGAAGATGAC
FD579771       --> CTCCTCACGGAAGCACCTCTCAACCCTAAAGCTAACCGTGAGAAGATGAC
EX895645       --> CTCCTCACGGAAGCACCTCTCAACCCTAAAGCTAACCGTGAGAAGATGAC
EX896865       --> CTCCTCACGGAAGCACCTCTCAACCCTAAAGCTAACCGTGAGAAGATGAC
EY896701       --> CTCCTCACGGAAGCACCTCTCAACCCTAAAGCTAACCGTGAGAAGATGAC
FD543571       --> CTCCTCACGGAAGCACCTCTCAACCCTAAAGCTAACCGTGAGAAGATGAC
FD946761       --> CTCCTCACGGAAGCACCTCTCAACCCTAAAGCTAACCGTGAGAAGATGAC
FD970117       --> CTCCTCACGGAAGCACCTCTCAACCCTAAAGCTAACCGTGAGAAGATGAC
FD981146       --> CTCCTCACGGAAGCACCTCTCAACCCTAAAGCTAACCGTGAGAGGATGAC
EV528677       --> CTCCTCACGGAAGCACCTCTCAACCCTAAAGCTAACCGTGAGAAGATGAC
EY947373       --> CTCCTCACGGAAGCACCTCTCAACCCTAAAGCTAACCGTGAGAAGATGAC
FD564274       --> CTCCTCACGGAAGCACCTCTCAACCCTAAAGCTAACCGTGAGAAGATGAC
EV536969       --> CTCCTCACGGAAGCACCTCTCAACCCTAAAGCTAACCGTGAGAAGATGAC
EV538043       --> CTCCTCACGGAAGCACCTCTCAACCCTAAAGCTAACCGTGAGAAGATGAC
FD544270       --> CTCCTCACGGAAGCACCTCTCAACCCTAAAGCTAACCGTGAGAAGATGAC
EX889584       --> CTCCTCACGGAAGCACCTCTCAACCCTAAAGCTAACCGTGAGAAGATGAC
EV538830       --> CTCCTCACGGAAGCACCTCTCAACCCTAAAGCTAACCGTGAGAAGATGAC
FD542732       --> ..................................................
EW714932       --> ..................................................

               401    -    451
UN23136        --> TCAAATCATGTTTGAGACTTTCAATGCCCCTGCCATGTACGTGGCTATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542759       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893279       <-- ..................................................  Raphanus sativus var. oleiformis
FD966557       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542142       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976925       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893186       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583696       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD942820       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX899692       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV541304       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547742       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD568036       <-- ..................................................  Raphanus sativus var. oleiformis
FD539919       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564586       --> TCAGATCATGTTTGAGACTTTCAATGCCCCTGCCATGTACGTGGCTATTC  Raphanus sativus var. oleiformis
FD579771       --> TCAGATCATGTTTGAGACTTTCAATGCCCCTGCCATGTACGTGGCTATTC  Raphanus sativus cv Rat-Tail Radish #3870
EX895645       --> TCAAATCATGTTTGAGACTTTCAATGCCCCTGCCATGTACGTGGCTATTC  Raphanus sativus cv Early Scarlet Globe
EX896865       --> TCAAATCATGTTTGAGACTTTCAATGCCCCTGCCATGTACGTGGCTATTC  Raphanus sativus cv Early Scarlet Globe
EY896701       --> TCAGATCATGTTTGAGACTTTCAATGCCCCTGCCATGTACGTGGCTATTC  Raphanus raphanistrum subsp. maritimus
FD543571       --> TCAAATCATGTTTGAGACTTTCAATGCCCCTGCCATGTACATGGCTATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946761       --> TCAAATCATGTTTGAGACTTTCAATGCCCCTGCCATGTACGTGGCTATTC  Raphanus sativus cv Early Scarlet Globe
FD970117       --> TCAAATCATGTTTGAGACTTTCAATGCCCCTGCCATGTACGTGGCTATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981146       --> TCAGATCATGTTTGAGACTTTCAATGCCCCTGCCATGTACGTGGCTATTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528677       --> TCATATCATGTTTGAGACTTTCAATGCCCCTGCCATGTACGTGGCTATTC  Raphanus raphanistrum subsp. maritimus
EY947373       --> TCAAATCATGTTTGAGACTTTCAATGCCCCTGCCATGTACGTGGCTATTC  Raphanus sativus cv Rat-Tail Radish #3870
FD564274       --> TCAGATCATGTTTGAGACTTTCAATGCCCCTGCCATGTACGTGGCTATTC  Raphanus sativus var. oleiformis
EV536969       --> TCAAATCATGTTTGAGACTTTCAATGCCCCTGCCATGTACGTGGCTATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538043       --> TCAAATCATGTTTGAGACTTTCAATGCCCCTGCCATGTACGTGGCTATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544270       --> TCAAATCATGTTTGAGACTTTCAATGCCCCTGCCATGTACGTGGCTATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889584       --> TCAGATCATGTTTGAGACTTTCAATGCCCCTGCCATGTACGTGGCTATTC  Raphanus sativus var. oleiformis
EV538830       --> TCAAATCATGTTTGAGACTTTCAATGCCCCTGCCATGTACGTGGCTATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542732       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714932       --> ..................................................  Raphanus sativus var. oleiformis

               451    -    501
UN23136        --> AGGCTGTGCTCTCCCTTTATGCCAGTGGTCGTACAACCGGTATTGTGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542759       <-- ................TTATGCCAGTGGTCGTACTACCGGTATTGTGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893279       <-- ..................................................  Raphanus sativus var. oleiformis
FD966557       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542142       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976925       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893186       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583696       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD942820       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX899692       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV541304       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547742       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD568036       <-- ..................................................  Raphanus sativus var. oleiformis
FD539919       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564586       --> AGGCTGTGCTCTCCCTTTATGCCAGTGGTCGTACAACCGGTATTGTGCTT  Raphanus sativus var. oleiformis
FD579771       --> AGGCTGTGCTCTCCCTTTATGCCAGTGGTCGTACAACCGGTATTGTGCTT  Raphanus sativus cv Rat-Tail Radish #3870
EX895645       --> AGGCTGTGCTCTCCCTTTACGCCAGTGGTCGTACAACCGGTATTGTGCTT  Raphanus sativus cv Early Scarlet Globe
EX896865       --> AGGCTGTGCTCTCCCTTTACGCCAGTGGTCGTACAACCGGTATTGTGCTT  Raphanus sativus cv Early Scarlet Globe
EY896701       --> AGGCTGTGCTCTCCCTTTATGCCAGTGGTCGTACAACCGGTATTGTGCTC  Raphanus raphanistrum subsp. maritimus
FD543571       --> AGGCTGTGCTCTCCCTTTATGCCAGTGGTCGTACTACCGGTATTGTGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946761       --> AGGCTGTGCTCTCCCTTTACGCCGGTGGTCGTACAACCGGTATTGTGCTT  Raphanus sativus cv Early Scarlet Globe
FD970117       --> AGGCTGTGCTCTCCCTTTATGCCAGTGGTCGTACTACCGGTATTGTGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981146       --> AGGCTGTGCTCTCCCTTTATGCCAGTGGTCGTACAACCGGTATTGTGCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528677       --> AGGCTGTGCTCTCCCTTTATGCCAGTGGTCGTACAACCGGTATTGTGCTC  Raphanus raphanistrum subsp. maritimus
EY947373       --> AGGCTGTGCTCTCCCTTTACGCCAGTGGTCGTACAACCGGTATTGTGCTT  Raphanus sativus cv Rat-Tail Radish #3870
FD564274       --> AGGCTGTGCTCTCCCTTTATGCCAGTGGTCGTACAACCGGTATTGTGCTT  Raphanus sativus var. oleiformis
EV536969       --> AGGCTGTGCTCTCCCTTTATGCCAGTGGTCGTACTACCGGTATTGTGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538043       --> AGGCTGTGCTCTCCCTTTATGCCAGTGGTCGTACTACCGGTATTGTGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544270       --> AGGCTGTGCTCTCCCTTTATGCCAGTGGTCGTACTACCGGTATTGTGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889584       --> AGGCTGTGCTCTCCCTTTATGCCAGTGGTCGTACAACCGGTATTGTGCTT  Raphanus sativus var. oleiformis
EV538830       --> AGGCTGTGCTCTCCCTTTATGCCAGTGGTCGTACTACCGGTATTGTGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542732       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714932       --> ..................................................  Raphanus sativus var. oleiformis

               501    -    551
UN23136        --> GACTCTGGAGATGGTGTGAGCCACACGGTTCCTATCTACGAGGGCTATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542759       <-- GACTCTGGAGATGGTGTGAGCCACACGGTTCCTATCTACGAGGGCTATGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893279       <-- .................................ATCTACGAGGGCTATGC  Raphanus sativus var. oleiformis
FD966557       <-- ....................................TACGAGGGCTATGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542142       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976925       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893186       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583696       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD942820       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX899692       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV541304       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547742       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD568036       <-- ..................................................  Raphanus sativus var. oleiformis
FD539919       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564586       --> GACTCTGGAGATGGTGTGAGCCACACGGTTCCTATCTACGAGGGCTATGC  Raphanus sativus var. oleiformis
FD579771       --> GACTCTGGAGATGGTGTGAGCCACACGGTTCCTATCTACGAGGGCTATGC  Raphanus sativus cv Rat-Tail Radish #3870
EX895645       --> GACTCTGGAGATGGTGTGAGCCACACGGTTCCTATCTACGAGGGCTATGC  Raphanus sativus cv Early Scarlet Globe
EX896865       --> GACTCTGGAGATGGTGTGAGCCACACGGTTCCTATCTACGAGGGCTATGC  Raphanus sativus cv Early Scarlet Globe
EY896701       --> GACTCTGGAGATGGTGTGAG..............................  Raphanus raphanistrum subsp. maritimus
FD543571       --> GACTCTGGAGATGGTGTGAGCCACACGGTTCCTATCTACGAGGGCTATGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946761       --> GACTCTGGAGATGGTGTGAGCCACACGGTTCCTATCTACGAGGGCTATGC  Raphanus sativus cv Early Scarlet Globe
FD970117       --> GACTCTGGAGATGGTGTGAGTCACACGGTTCCTATCTACGAGGGCTATGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981146       --> GACTCTGGAGATGGTGTGAGCCACACGGTTCCTATCTACGAGGGCTATGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528677       --> GACTCTGGAGATGGTGTGAGCCACACGGTTCCTATCTACGAGGGCTATGC  Raphanus raphanistrum subsp. maritimus
EY947373       --> GACTCTGGAGATGGTGCGAGCCACACAGTTCCTATCTACGAGGGCTATGC  Raphanus sativus cv Rat-Tail Radish #3870
FD564274       --> GACTCTGGAGATGGTGTGAGCCACACGGCTCCTATCTACGAGGGCTATGC  Raphanus sativus var. oleiformis
EV536969       --> GACTCTGGAGATGGTGTGAGCCACACGGTTCCTATCTACGAGGGCTATGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538043       --> GACTCTGGAGATGGTGTGAGCCACACGGTTCCTATCTACGAGGGCTATGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544270       --> GACTCTGGAGATGGTGTGAGCCACACGGTTCCTATCTACGAGGGCTATGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889584       --> GACTCTGGAGATGGTGTGAGCCACACGGTTCCTATCTACGAGGGCTATGC  Raphanus sativus var. oleiformis
EV538830       --> GACTCTGGAGATGGTGTGAGCCACACGGTTCCTATCTACGAGGGCTATGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542732       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714932       --> ..................................................  Raphanus sativus var. oleiformis

               551    -    601
UN23136        --> ACTTCCACATGCCATCCTACGTCTTGATCTCGCGGGTCGTGACCTCACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542759       <-- GCTTCCACATGCCATC-TACGTCTTGATCTCGCGGGTCGTGACCTCACCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893279       <-- ACTCCCACATGCTATC-TACGTCTTGATCTCGCGGGTCGTGACCTCACGG  Raphanus sativus var. oleiformis
FD966557       <-- GCTTCCACATGCCATCCTACGTCTTGATCTCGCGGGTCGTGACCTCACCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542142       <-- .....................TCTTGATCTCGCGGGTCGTGACCTCACCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976925       <-- ............................................TCACCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893186       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583696       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD942820       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX899692       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV541304       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547742       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD568036       <-- ..................................................  Raphanus sativus var. oleiformis
FD539919       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564586       --> ACTCCCACATGCTATCCTACGTCTTGATCTCGCGGGTCGTGACCTCACGG  Raphanus sativus var. oleiformis
FD579771       --> ACTCCCACATGCTATCCTACGTCTTGATCTCGCGGGTCGTGACCTCACGG  Raphanus sativus cv Rat-Tail Radish #3870
EX895645       --> ACTTCCACATGCCATCCTACGTCTTGATCTCGCGGGTCGTGACCTCACCG  Raphanus sativus cv Early Scarlet Globe
EX896865       --> ACTTCCACATGCCATCCTACGTCTTGATCTCGCGGGTCGTGACCTCACCG  Raphanus sativus cv Early Scarlet Globe
EY896701       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD543571       --> GCTTCCACATGCCATCCTACGTCTTGATCTCGCGGGTCGTGACCTCACCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946761       --> ACTTCCACATGCCATCCTACGTCTTGATCTCGCGGGTCGTGACCTCACCG  Raphanus sativus cv Early Scarlet Globe
FD970117       --> GCTTCCACATGCCATCCTACGTCTTGATCTCGCGGGTCGTGACCTCACCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981146       --> ACTTCCACATGCCATCCTACGTCTTGATCTCGCGGGTCGTGACCTCACCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528677       --> ACTTCCACATGCCATCCTACGTCTTGATCTCGCGGGCCGTGACCTCACCG  Raphanus raphanistrum subsp. maritimus
EY947373       --> TCTTCCACATGCCATCCTACGTCTTGATCTCGCAGGTCGTGACCTCACGG  Raphanus sativus cv Rat-Tail Radish #3870
FD564274       --> ACTCCCACATGCTATCCTACGTCTTGATCTCGCGGGTCGTGACCTCACGG  Raphanus sativus var. oleiformis
EV536969       --> GCTTCCACATGCCATCCTACGTCTTGATCTCGCGGGTCGTGACCTCACCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538043       --> GCTTCCACATGCCATCCTACGTCTTGATCTCGCGGGTCGTGACCTCACCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544270       --> GCTTCCACATGCCACCCTACGTCTTGATCTCGCGGGTCGTGACCTCACCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889584       --> ACTCCCACATGCTATCCTACGTCTTGATCTCGCGGGTCGTGACCTCACGG  Raphanus sativus var. oleiformis
EV538830       --> GCTTCCACATGCCATCCTACGTCTTGATCTCGCGGGTCGTGACCTCACCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542732       --> ............gATCCTACGTCTTGATCTCGCGGGTCGTGACCTCACCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714932       --> ..................................................  Raphanus sativus var. oleiformis

               601    -    651
UN23136        --> ACGCGTTTATGAAGATCCTAACCGAGCGTGGTTACTCTTTCACCACCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542759       <-- ACGCGTTTATGAAGATCCTAACCGAGCGTGGTTACTCTTTCACCACTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893279       <-- ACGCGTTTATGAAGATCCTAACCGAGCGTGGGTACTCTTTCACCACCACA  Raphanus sativus var. oleiformis
FD966557       <-- ACGCGTTTATGAAGATCCTAACCGAGCGTGGTTACTCTTTCACCACTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542142       <-- ACGCGTTTATGAAGATCCTAACCGAGCGTGGTTACTCTTTCACCACTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976925       <-- ACGCGTTTATGAAGATCCTAACCGAGCGTGGGTACTCTTTCACTACCACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893186       <-- ...............................................ACA  Raphanus raphanistrum subsp. maritimus
FD583696       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD942820       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX899692       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV541304       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547742       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD568036       <-- ..................................................  Raphanus sativus var. oleiformis
FD539919       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564586       --> ACGCGTTTATGAAGATCCTAACCGAGCGTGGGTACTCTTTCACCACCACA  Raphanus sativus var. oleiformis
FD579771       --> ACGCGTTTATGAAGATCCTAACCGAGCGTGGGTACTCTTTCACCACCACA  Raphanus sativus cv Rat-Tail Radish #3870
EX895645       --> ACGCGTTTATGAAGATCCTAACCGAGCGTGGATACTCTTTCACCACCACA  Raphanus sativus cv Early Scarlet Globe
EX896865       --> ACGCGTTTATGAAGATCCTAACCGAGCGTGGATACCCTTTCACCACCACA  Raphanus sativus cv Early Scarlet Globe
EY896701       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD543571       --> ACGCGTTTATGA-GATCCTAACCGAGCGTGGTTACTCTTTCAC-ACTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946761       --> ACGCGTTTATGAAGATCCTAACCGAGCGTGGATACTCTTTCACCACCACA  Raphanus sativus cv Early Scarlet Globe
FD970117       --> ACGCGTTTATGA-GATCCTAACCGAGCGTGGTTACTCTTTCACCACTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981146       --> ACGCGTTTATGAAGATCCTAACCGAGCGTGGGTACTCTTTCACTACCACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528677       --> ACGCGTTTATGAAGATCCTAACCGAGCGTGGGTACTCTTTCACTACCACA  Raphanus raphanistrum subsp. maritimus
EY947373       --> ACGCATTTATGAAGATCCTAACCGAGCGTGGGTACTCTTTCACCACCACC  Raphanus sativus cv Rat-Tail Radish #3870
FD564274       --> ACGCGTTTATGAAGATCCTAACCGAGCGTGGGTACTCTTTCACCACCACA  Raphanus sativus var. oleiformis
EV536969       --> ACGCGTTTATGAAGATCCTAACCGAGCGTGGTTACTCTTTCACCACTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538043       --> ACGCGTTTATGAAGATCCTAACCGAGCGTGGTTACTCTTTCACCACTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544270       --> ACGCGTTTATGAAGATCCTAACCGAGCGTGGTTACTCTTTCACCACTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889584       --> ACGCGTTTATGAAGATCCTAACCGAGCGTGGGTACTCTTTCACCACCACA  Raphanus sativus var. oleiformis
EV538830       --> ACGCGTTTATGAAGATCCTAACCGAGCGTGGTTACTCTTTCACCACTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542732       --> ACGCGTTTATGAAGATCCTAACCGAGCGTGGTTACTCTTTCACCGCTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714932       --> ..................................................  Raphanus sativus var. oleiformis

               651    -    701
UN23136        --> GCAGAGCGTGAAATCGTCAGAGACATAAAGGAGAAGCTCTGCTACATTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542759       <-- GCAGAGCGTGAAATCGTCAGAGACATAAAGGAGAAGCTCTGCTACATTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893279       <-- GCGGAGCGTGAAATCGTCAGAGACATAAAGGAGAAGCTCTGCTACATTGC  Raphanus sativus var. oleiformis
FD966557       <-- GCAGAGCGTGAAATCGTCAGAGACATAAAGGAGAAGCTCTGCTACATTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542142       <-- GCAGAGCGTGAAATCGTCAGAGACATAAAGGAGAAGTTCTGCTACATTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976925       <-- GCAGAGCGTGAAATTGTCAGAGACATAAAGGAGAAGCTCTGCTACATTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893186       <-- GCAGAGCGTGAAATTGCCAGAGACATAAAGGAGAAGCTCTGCTACATTGC  Raphanus raphanistrum subsp. maritimus
FD583696       <-- ................TCAGAGACATAAAGGAGAAGCTCTGCTACATTGC  Raphanus sativus cv Rat-Tail Radish #3870
FD942820       <-- ......................ACATAAAGGAGAAGCTCTGCTACATTGC  Raphanus sativus cv Early Scarlet Globe
EX899692       <-- .....................................TCTGCTACATTGC  Raphanus sativus cv Early Scarlet Globe
EV541304       <-- ...........................................ACATTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547742       <-- ...........................................ACATTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD568036       <-- ..................................................  Raphanus sativus var. oleiformis
FD539919       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564586       --> GCGGAGCGTGAAATCGTCAGAGACATAAAGGAGAAGCTCTGCTACATTGC  Raphanus sativus var. oleiformis
FD579771       --> GCGGAGCGTGAAATCGTCAGAGACATAAAGGAGAAGCTCTGCTACATTGC  Raphanus sativus cv Rat-Tail Radish #3870
EX895645       --> GCAGAGCGTGAAATCGTCAGAGACATAAAGGAGAAGCTCTGCTACATTGC  Raphanus sativus cv Early Scarlet Globe
EX896865       --> GCAGAGCGTGAAATCGTCAGAGACATAAAGGAGAAGCTCTGCTACATTGC  Raphanus sativus cv Early Scarlet Globe
EY896701       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD543571       --> GCAGAGCGTGAAATCGTCAGAGACATAAAGGAGA-GCTCTGCTACATTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946761       --> GCAGAGCGTGAAATCGTCAGAGACATAAAGGAGA-GCTCTGCTACATTGC  Raphanus sativus cv Early Scarlet Globe
FD970117       --> GCAGAGCGTGAAATCGTCAGAGACATAAAGGAGA-GCTCTGCTACATTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981146       --> GCAGAGCGTGAAATTGTCAGAGACATAAAGGAGAAGCTCTGCTACATTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528677       --> GCAGAGCGTGAAATTGTCAGAGACATAAAGGAGAAGCTCTGCTACATTGC  Raphanus raphanistrum subsp. maritimus
EY947373       --> GCAGAGCGTGAAATTGTCAGAGACATAAAGGAGAAGCTCTGCTACATTGC  Raphanus sativus cv Rat-Tail Radish #3870
FD564274       --> GCGGAGCGTGAAATCGTCAGAGACATAAAGGAGAAGCTCTGCTACATTGC  Raphanus sativus var. oleiformis
EV536969       --> GCAGAGCGTGAAATCGTCAGATACATAAAGGAGAAGCTCTGCTACATTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538043       --> GCAGAGCGTGAAATCGTCAGAGACATAAAGGAGAAGCTCTGCTACATTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544270       --> GCAGAGCGTGAAATCGTCAGAGACATAAAGGAGAAGCTCTGCTACATTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889584       --> GCGGAGCGTGAAATCGTCAGAGACATAAAGGAGAAGCTCTGCTACATTGC  Raphanus sativus var. oleiformis
EV538830       --> GCAGAGCGTGAAATCGTCAGAGACATAAAGGAGAAGCTCTGCTACATTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542732       --> GCAGAGCGTGAAATCGTCAGAGACATAAAGGAGAAGCTCTGCTACATTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714932       --> ..................................................  Raphanus sativus var. oleiformis

               701    -    751
UN23136        --> TCTTGACTACGAGCAGGAGCTAGAGACATCCAAAACAAGCTCATCTGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542759       <-- TCTCGACTACGAGCAGGAGCTAGAGACATCCAAAACAAGCTCATCTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893279       <-- TCTTGACTAC-AGCAGGAGCTAGAGACATCCAAAACAAGCTCATCTGTTG  Raphanus sativus var. oleiformis
FD966557       <-- TCTCGACTACGAGCAGGAGCTAGAGACATCCAAAACAAGCTCATCTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542142       <-- TCTCGACTACGAGCAGGAGCTAGAGACATCCAAAACAAGCTCATCTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976925       <-- TCTTGACTACGAGCAGGAGCTAGAGACATCCAAAACAAGCTCATCTGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893186       <-- TCTTGACTACGAGCAGGAGCTAGAGACATCCAAAACAAGCTCATCTGTTG  Raphanus raphanistrum subsp. maritimus
FD583696       <-- TCTTGACTACGAGCAGGAGCTAGAGACATCCAAAACAAGCTCATCTGTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD942820       <-- TCTTGACTACGAGCAGGAGCTAGAGACATCCAAAACAAGCTCATCTGTTG  Raphanus sativus cv Early Scarlet Globe
EX899692       <-- TCTTGACTACGAGCAGGAGCTAGAGACATCCAAAACAAGCTCATCTGTTG  Raphanus sativus cv Early Scarlet Globe
EV541304       <-- TCTCGACTACGAGCAGGAGCTAGAGACATCCAAAACAAGCTCATCTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547742       <-- TCTTGACTACGAGCAGGAGCTAGAGACATCCAAAACAAGCTCATCTGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD568036       <-- ...............................................taG  Raphanus sativus var. oleiformis
FD539919       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564586       --> TCTTGACTACGAGCAG-AGCTAGAGACATCCAAA-CAAGCTCATCTGTAG  Raphanus sativus var. oleiformis
FD579771       --> TCTTGACTACGAGCAGGAGCTAGAGACATCCAAAA-AAGCTCATCTGTTG  Raphanus sativus cv Rat-Tail Radish #3870
EX895645       --> TCTTGACTACG.......................................  Raphanus sativus cv Early Scarlet Globe
EX896865       --> TCTTGACTACGAGCAGGAGCTAGAGACATCCAAA-CAAGCTCATCTGTTG  Raphanus sativus cv Early Scarlet Globe
EY896701       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD543571       --> TCTCGACTACGAGCAG-AGCTAGAGACATCCAAA-C-AGCTCATCTGT..  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946761       --> TCTTGACTACGAGCAG-AGCTAGAGACATCCAAA-CA-GCTCATCTGT-G  Raphanus sativus cv Early Scarlet Globe
FD970117       --> TCTCGACTACGAGCAG-AGCTAGAGACATCCAAA-C-AGCTCATCTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981146       --> TCTTGACTACGAGCAGGAGCTAGAGACATCCAAAA-AAGCTCATCTGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528677       --> TCTTGACTACGAGCAGGAGCTAGAGACATCCAAAACAAGCTCATCTGTTG  Raphanus raphanistrum subsp. maritimus
EY947373       --> TCTTGACTACGAGCAG-AGCTAGAGACATCCAAA-CAAGCTCATCTGTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD564274       --> TCTTGACTACGAGCAGGAGCTAGAGACATCCAAAACAAGCTCATCTGTTG  Raphanus sativus var. oleiformis
EV536969       --> TCTCGACTACGAGCAGGAGCTAGAGACATCCAAAACAAGCTCATCTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538043       --> TCTCGACTACGAGCAGGAGCTAGAGACATCCAAAACAAGCTCATCTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544270       --> TCTCGACTACGAGCAGGAGCTAGAGACATCCAAAACAAGCTCATCTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889584       --> TCTTGACTAC-AGCAGGAGCTAGAGACATCCAAAACAAGCTCATCTGTTG  Raphanus sativus var. oleiformis
EV538830       --> TCTCGACTACGAGCAGGAGCTAGAGACATCCAAAACAAGCTCATCTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542732       --> TCTCGACTACGAGCAGGAGCTAGAGACATCCAAAACAAGCTCATCTGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714932       --> ..................................................  Raphanus sativus var. oleiformis

               751    -    801
UN23136        --> AGAAGAACTACGAGATGCCTGATGG-ACAAGTGATCACCATCGGTGCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542759       <-- AGAAGAACTACGAGATGCCTGATGG-ACAAGTGATCACTATCGGTGCTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893279       <-- AGAAGAACTACGAGATGCCTGATGG-ACAAGTGATCACCATCGGTGCTGA  Raphanus sativus var. oleiformis
FD966557       <-- AGAAGAACTACGAGATGCCTGATGG-ACAAGTGATCACTATCGGTGCTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542142       <-- AGAAGAACTACGAGATGCCTGATGG-ACAAGTGATCACTATCGGTGCTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976925       <-- AGAAGAACTACGAGATGCCTGATGG-GCAAGTGATCACCATCGGTGCTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893186       <-- AGAAGAACTACGAGATGCCTGATGG-GCAAGTGATCACCATCGGTGCTGA  Raphanus raphanistrum subsp. maritimus
FD583696       <-- AGAAGAACTACGAGATGCCTGATGG-ACAAGTGATCACCATCGGTGCTGA  Raphanus sativus cv Rat-Tail Radish #3870
FD942820       <-- AGAAGAACTACGAGATGCCTGATGG-ACAAGTGATCACCATCGGTGCTGA  Raphanus sativus cv Early Scarlet Globe
EX899692       <-- AGAAGAACTACGAGATGCCTGATGG-ACAAGTGATCACCATCGGTGCTGA  Raphanus sativus cv Early Scarlet Globe
EV541304       <-- AGAAGAACTACGAGATGCCTGATGG-ACAAGTGATCACTATCGGTGCTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547742       <-- GGAAGAACTACGAGATGCCTGATGG-GCAAGTGATCACCATCGGTGCTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD568036       <-- AGAAGAACTACGAGATGCCTGATGG-ACAAGTGATCACCATCGGTGCTGA  Raphanus sativus var. oleiformis
FD539919       <-- .........ACGAGATGCCTGATGG-ACAAGTGATCACTATCGGTGCTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564586       --> AGAAGAACTACGAGATGCCTGATGG-ACA-GTGATCACCATCGGTGCTGA  Raphanus sativus var. oleiformis
FD579771       --> AGA-G-ACTACGAGATGC-TGATGG-ACA-GTGATCACCATCGGTGCTGA  Raphanus sativus cv Rat-Tail Radish #3870
EX895645       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX896865       --> AGAA-AACTACGAGATGCCTG.............................  Raphanus sativus cv Early Scarlet Globe
EY896701       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD543571       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946761       --> AGA-GA-CTACGAGATGC-TGATG--ACA-GTGATCAC............  Raphanus sativus cv Early Scarlet Globe
FD970117       --> AGAgactac.........................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981146       --> AGAA-AACTACGAGATGCCTGATGG-GC-AGTGATCACCATCGGTGCTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528677       --> AGAAGAACTACGAGATGCCTGATGG-GCAAGTGATCACCATCGGTGCTGA  Raphanus raphanistrum subsp. maritimus
EY947373       --> AGAAGA-CTACGAGATGC-TGATGG-GCAAGTGATCACCATCGGTGC...  Raphanus sativus cv Rat-Tail Radish #3870
FD564274       --> AGAAGA-CTACGAGATGCCTGATGG-ACAAGTGATCACCATCGGTGCTGA  Raphanus sativus var. oleiformis
EV536969       --> AGAAGAACTACGAGATGCCTGATGG-ACAAGTGATCACTATCGGTGCTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538043       --> AGAAGAACTACGAGATGCCTGATGGGACAAGTGATCACTATCGGTGCTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544270       --> AGAAGAACTACGAGATGCCTGATGG-ACAAGTGATCACTATCGGTGCTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889584       --> AGAAGAACTACGAGATGCCTGATGG-ACAAGTGATCACCATCGGTGCTGA  Raphanus sativus var. oleiformis
EV538830       --> AGAAGAACTACGAGATGCCTGATGG-ACAAGTGATCACTATCGGTGCTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542732       --> AGAAGAACTACGAGATGCCTGATGG-ACAAGTGATCACTATCGGTGCTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714932       --> ....................................ACCATCGGTGCTGA  Raphanus sativus var. oleiformis

               801    -    851
UN23136        --> ACGTTTCCGTTGTCCTGAGGTTCTTTACCAGCCGTCTATGATTGGTATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542759       <-- ACGTTTCCGTTGTCCTGAGGTTCTTTACCAGCCGTCTATGATTGGTATGG
EX893279       <-- ACGTTTCCGTTGTCCTGAGGTTCTTTACCAGCCGTCTATGATTGGTATGG
FD966557       <-- ACGTTTCCGTTGTCCTGAGGTTCTTTACCAGCCGTCTATGATTGGTGTGG
EV542142       <-- ACGTTTCCGTTGTCCTGAGGTTCTTTACCAGCCGTCTATGATTGGTATGG
FD976925       <-- ACGTTTCCGTTGTCCTGAGGTTCTTTACCAGCCGTCTATGATTGGTATGG
EY893186       <-- ACGTTTCCGTTGTCCTGAGGTTCTTTACCAGCCGTCTATGATTGGTATGG
FD583696       <-- ACGTTTCCGTTGTCCTGAGGTTCTTTACCAGCCGTCTATGATTGGTATGG
FD942820       <-- ACGTTTCCGTTGTCCTGAGGTTCTTTACCAGCCGTCTATGATTGGTATGG
EX899692       <-- ACGTTTCCGTTGTCCTGAGGTTCTTTACCAGCCGTCTATGATTGGTATGG
EV541304       <-- ACGTTTCCGTTGTCCTGAGGTTCTTTACCAGCCGTCTATGATTGGTATGG
FD547742       <-- ACGTTTCCGTTGTCCTGAGGTTCTTTACCAGCCGTCTATGATTGGTATGG
FD568036       <-- ACGTTTCCGTTGTCCTGAGGTTCTTTACCAGCCGTTTATGATTGGTATGG
FD539919       <-- ACGTTTCCGTTGTCCTGAGGTTCTTTACCAGCCGTCTATGATTGGTATGG
FD564586       --> ACGTTTCC..........................................
FD579771       --> ACGTTT............................................
EX895645       --> ..................................................
EX896865       --> ..................................................
EY896701       --> ..................................................
FD543571       --> ..................................................
FD946761       --> ..................................................
FD970117       --> ..................................................
FD981146       --> A.................................................
EV528677       --> ACGTTTCCGTTGTCCTGAG-TTCTTTACCAGCCGTCTATGATTGGTATG.
EY947373       --> ..................................................
FD564274       --> ACGTTTCCGTTGTCC...................................
EV536969       --> ACGTTTCCGTTGTCCTGAG-TTCTTTACCAGCCGTCTATGATTGGTATGG
EV538043       --> ACGTTTCCGTTGTCCTGAG-TTCTTT........................
FD544270       --> ACGTTTCCGTTGTCCTGAGGTTCTTTACCAGCCGTCTATGATTGGTATGG
EX889584       --> ACGTTTCCGTTGTCCTGAGGTTCTTTACCAGCCGTCTATGATTGGTATGG
EV538830       --> ACGTTTCCGTTGTCCTGAGGTTCTTTACCAGCCGTCTATGATTGGTATGG
FD542732       --> ACGTTTCCGTTGTCCTGAGGTTCTTTACCAGCCGTCTATGATTGGTATGG
EW714932       --> ACGTTTCCGTCGTCCTGAGGTTCTTTACCAGCCGTCTATGATTGGTATGG

               851    -    901
UN23136        --> AGAATCCAGGTATCCATGAAACGACCTATAACTCCATAATGAAGTGTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542759       <-- AGAATCCAGGTATCCATGAAACGACCTATAACTCCATAATGAAGTGTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893279       <-- AGAATCCAGGTATCCATGAAACGACCTACAACTCCATAATGAAATGTGAT  Raphanus sativus var. oleiformis
FD966557       <-- AGAATCCAGGTATCCATGAAACGACCTATAACTCCATAATGAAGTGTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542142       <-- AGAATCCAGGTATCCAGGAAACGACCTATAACTCCATAATGAAGTGTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976925       <-- AGAATCCAGGTATCCATGAAACGACCTATAACTCCATAATGAAGTGTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893186       <-- AGAATCCAGGTATCCATGAAACGACCTATAACTCCATAATGAAGTGTGAT  Raphanus raphanistrum subsp. maritimus
FD583696       <-- AGAATCCAGGTATCCATGAAACGACCTACAACTCCATAATGAAATGTGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD942820       <-- AGAATCCAGGTATCCATGAAACGACCTACAACTCCATAATGAAGTGTGAT  Raphanus sativus cv Early Scarlet Globe
EX899692       <-- AGAATCCAGGTATCCATGAAACGACCTACAACTCCATAATGAAGTGTGAT  Raphanus sativus cv Early Scarlet Globe
EV541304       <-- AGAATCCAGGTATCCATGAAACGACCTATAACTCCATAATGAAGTGTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547742       <-- AGAATCCAGGTATCCATGAAACGACCTATAACTCCATAATGAAGTGTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD568036       <-- AGAATCCAGGTATCCATGAAACGACCTACAACTCCATAATGAAATGTGAT  Raphanus sativus var. oleiformis
FD539919       <-- AGAATCCAGGTATCCATGAAACGACCTATAACTCCATAATGAAGTGTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564586       --> ..................................................  Raphanus sativus var. oleiformis
FD579771       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX895645       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX896865       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY896701       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD543571       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946761       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD970117       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981146       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528677       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY947373       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD564274       --> ..................................................  Raphanus sativus var. oleiformis
EV536969       --> AGAATCCAGGTATCCATGAAACGACCTATAACTCCATAATGAA.......  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538043       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544270       --> AGAATCCAGGTATCCATGAAACGACCTATAACTCCATAATGAAGTGTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889584       --> AGAATCCAGGTATCCATGAAACGACCTACAACTCCATAATGAAATGTGAT  Raphanus sativus var. oleiformis
EV538830       --> AGAATCCAGGTATCCATGAAACGACCTATAACTCCATAATGAAGTGTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542732       --> AGAATCCAGGTATCCACGAAACGACCTATAACTCCATAATGAAGTGTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714932       --> AGAATCCAGGTATCCATGAAACGACCTACAACTCCATAATGAAATGTGAT  Raphanus sativus var. oleiformis

               901    -    951
UN23136        --> GTCGACATCAGAAAGGACTTGTATGGTAACATCGTCCTCAGTGGTGGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542759       <-- GTCGACATCAGGAAGGACTTGTATGGTAACATCGTCCTCAGTGGTGGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893279       <-- GTCGACATCAGAAAGGACTTGTATGGTAACATCGTCCTCAGTGGTGGAAC  Raphanus sativus var. oleiformis
FD966557       <-- GTCGACATCAGGAAGGACTTGTATGGTAACATCGTCCTCAGTGGTGGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542142       <-- GTCGACATCAGGAAGGACTTGTATGGTAACATCGTCCTCAGTGGTGGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976925       <-- GTCGACATCAGAAAGGACTTGTATGGTAACATCGTCCTCAGTGGTGGAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893186       <-- GCCGACATCAGAAAGGACTTGTATGGTAACATCGTCCTCAGTGGTGGAAC  Raphanus raphanistrum subsp. maritimus
FD583696       <-- GTCGACATCAGAAAGGACTTGTATGGTAACATCGTCCTCAGTGGTGGAAC  Raphanus sativus cv Rat-Tail Radish #3870
FD942820       <-- GTCGACATCAGAAAGGACTTGTATGGTAACATCGTCCTCAGTGGTGGAAC  Raphanus sativus cv Early Scarlet Globe
EX899692       <-- GTCGACATCAGAAAGGACTTGTATGGTAACATCGTCCTCAGTGGTGGAAC  Raphanus sativus cv Early Scarlet Globe
EV541304       <-- GTCGACATCAGGAAGGACTTGTATGGTAACATCGTCCTCAGTGGTGGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547742       <-- GTCGACATCAGAAAGGACTTGTATGGTAACATCGTCCTCAGTGGTGGAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD568036       <-- GTCGACATCAGAAAGGACTTGTATGGTAACATCGTCCTCAGTGGTGGAAC  Raphanus sativus var. oleiformis
FD539919       <-- GTCGACATCAGGAAGGACTTGTATGGTAACATCGTCCTCAGTGGTGGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564586       --> ..................................................  Raphanus sativus var. oleiformis
FD579771       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX895645       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX896865       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY896701       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD543571       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946761       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD970117       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981146       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528677       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY947373       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD564274       --> ..................................................  Raphanus sativus var. oleiformis
EV536969       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538043       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544270       --> GTCGACATCAGGAAGGACTTGTATGGTAACATCGTCCTCAGT........  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889584       --> GTCGACATCAGAAAGGACTTGTATGGTAACATCGTCCTCAGTGGTGGAAC  Raphanus sativus var. oleiformis
EV538830       --> GTCGACATCAGGAAGGACTTGTATGGTAACATCGTCCTCAGTGGTGGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542732       --> GTCGACATCAGGAAGGACTTGTATGGTAACATCGTCCTCAGTGGTGGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714932       --> GTCGACATCAGAAAGGACTTGTATGGTAACATCGTCCTCAGTGGTGGAAC  Raphanus sativus var. oleiformis

               951    -   1001
UN23136        --> TACAATGTTCCCGGGGATCGCTGATAGAATGAGTAAGGAGATCACTGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542759       <-- TACAATGTTCCCTGGAATCGCTGATAGAATGAGTAAGGAGATCACTGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893279       <-- CACAATGTTCCCGGGGATCGCTGATAGAATGAGCAAGGAGATCACTGCAT  Raphanus sativus var. oleiformis
FD966557       <-- TACAATGTCCCCTGGAATCGCTGATAGAATGAGTAAGGAGATTACTGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542142       <-- TACAATGTTCCCTGGAATCGCTGATAGAATGAGTAAGGAGATCACTGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976925       <-- TACAATGTTCCCGGGGATCGCTGATCGAATGAGTAAGGAGATCACTGCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893186       <-- TACAATGTTCCCGGGGATCGCTGATCGAATGAGTAAGGAGATCACTGCAT  Raphanus raphanistrum subsp. maritimus
FD583696       <-- CACAATGTTCCCGGGGATCGCTGATAGAATGAGCAAGGAGATCACTGCAT  Raphanus sativus cv Rat-Tail Radish #3870
FD942820       <-- TACAATGTTCCCGGGGATTGCTGATAGAATGAGTAAGGAGATCACTGCTT  Raphanus sativus cv Early Scarlet Globe
EX899692       <-- TACAATGTTCCCGGGGATTGCTGATAGAATGAGTAAGGAGATCACTGCTT  Raphanus sativus cv Early Scarlet Globe
EV541304       <-- TACAATGTTCCCTGGAATCGCTGATAGAATGAGTAAGGAGATCACTGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547742       <-- TACAATGTTCCCGGGGATCGCTGATCGAATGAGTAAGGAGATCACTGCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD568036       <-- CACAATGTTCCCGGGGATCGCTGATAGAATGAGCAAGGAGATCACTGCAT  Raphanus sativus var. oleiformis
FD539919       <-- TACAATGTTCCCTGGAATCGCTGATAGAATGAGTAAGGAGATCACTGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564586       --> ..................................................  Raphanus sativus var. oleiformis
FD579771       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX895645       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX896865       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY896701       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD543571       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946761       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD970117       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981146       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528677       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY947373       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD564274       --> ..................................................  Raphanus sativus var. oleiformis
EV536969       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538043       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544270       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889584       --> CACAATGTTCCCGGG-ATCGCTGATAGAATGAGCAAG-AGATCACT....  Raphanus sativus var. oleiformis
EV538830       --> TACAATGTTCCCTGGAATCGCTGATAGAATGAGTAAAGAGATCACTGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542732       --> TACAATGTTCCCTGGAATCGCTGATAGAATGAGTAAGGAGATCACTGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714932       --> CACAATGTTCCCGGGGATCGCTGATAGAATGAGCAAGGAGATCACTGCAT  Raphanus sativus var. oleiformis

               1001   -   1051
UN23136        --> TGGCTCCAAGCAGCATGAAGATCAAAGTTGTTGCACCTCCTGAGAGGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542759       <-- TGGCTCCAAGCAGCATGAAGATCAAAGTTGTTGCACCTCCTGAGAGGAAA
EX893279       <-- TGGCTCCAAGCAGCATGAAGATCAAAGTTGTTGCACCTCCTGAGAGGAAA
FD966557       <-- TGGCTCCAAGCAGCATGAAGATCAAAGTTGTTGCACCTCCTGAGAGGAAA
EV542142       <-- TGGCTCCAAGCAGCATGAAGATCAAAGTTGTTGCACCTCCTGAGAGGAAA
FD976925       <-- TGGCTCCAAGCAGCATGAAGATCAAAGTTGTTGCACCTCCTGAGAGGAAA
EY893186       <-- TGGCTCCAAGCAGCATGAAGATCAAAGTTGTTGCACCTCCTGAGAGGAAA
FD583696       <-- TGGCTCCAAGCAGCATGAAGATCAAAGTTGTTGCACCTCCTGAGAGGAAA
FD942820       <-- TGGCTCCAAGCAGCATGAAGATCAAAGTTGTTGCACCTCCTGAGAGGAAA
EX899692       <-- TGGCTCCAAGCAGCATGAAGATCAAAGTTGTTGCACCTCCTGAGAGGAAA
EV541304       <-- TGGCTCCAAGCAGCATGAAGATCAAAGTTGTTGCACCTCCTGAGAGGAAA
FD547742       <-- TGGCTCCAAGCAGCATGAAGATCAAAGTTGTTGCACCTCCTGAGAGGAAA
FD568036       <-- TGGCTCCAAGCAGCATGAAGATCAAAGTTGTTGCACCTCCTGAGAGGAAA
FD539919       <-- TGGCTCCAAGCAGCATGAAGATCAAAGTTGTTGCACCTCCTGAGAGGAAA
FD564586       --> ..................................................
FD579771       --> ..................................................
EX895645       --> ..................................................
EX896865       --> ..................................................
EY896701       --> ..................................................
FD543571       --> ..................................................
FD946761       --> ..................................................
FD970117       --> ..................................................
FD981146       --> ..................................................
EV528677       --> ..................................................
EY947373       --> ..................................................
FD564274       --> ..................................................
EV536969       --> ..................................................
EV538043       --> ..................................................
FD544270       --> ..................................................
EX889584       --> ..................................................
EV538830       --> TGGCTCCAAGCAGCATGAAGATCAAAGTTGTTGCACCTCCTGAGAGGAAA
FD542732       --> TGGCTCCAAGCAGCATGAAGATCAAAGTTGTTGCACCTCCTGAGAGGAAA
EW714932       --> TGGCTCCAAGCAGCATGAAGATCAAAGTTGTTGCACCTCCTGAGAGGAAA

               1051   -   1101
UN23136        --> TACTCTGTTTGGATTGGAGGGTCCATCTTGGCTTCACTCAGTACCTTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542759       <-- TACTCTGTTTGGATTGGAGGGTCCATCTTGGCTTCACTCAGTACCTTCCA
EX893279       <-- TACTCTGTTTGGATTGGAGGGTCCATCTTGGCTTCACTCAGTACCTTCCA
FD966557       <-- TACTCTGTTTGGATTGGAGGGTCCATCTTGGCTTCACTCAGTACCTTCCA
EV542142       <-- TACTCTGTTTGGATTGGAGGGTCCATCTTGGCTTCACTCAGTACCTTCCA
FD976925       <-- TACTCTGTTTGGATTGGAGGGTCCATCTTGGCTTCACTCAGTACCTTCCA
EY893186       <-- TACTCTGTTTGGATTGGAGGGTCCATCTTGGCTTCACTCAGTACCTTCCA
FD583696       <-- TACTCTGTTTGGATTGGAGGGTCCATCTTGGCTTCACTCAGTACCTTCCA
FD942820       <-- TACTCTGTTTGGATTGGAGGGTCCATCTTGGCTTCACTCAGTACCTTCCA
EX899692       <-- TACTCTGTTTGGATTGGAGGGTCCATCTTGGCTTCACTCAGTACCTTCCA
EV541304       <-- TACTCTGTTTGGATTGGAGGGTCCATCTTGGCTTCACTCAGTACCTTCCA
FD547742       <-- TACTCTGTTTGGATTGGAGGGTCCATCTTGGCTTCACTCAGTACCTTCCA
FD568036       <-- TACTTTGTTTGGATTGGAGGGTCCATTTTGGCTTCACTCAGTACCTTCCA
FD539919       <-- TACTCTGTTTGGATTGGAGGGTCCATCTTGGCTTCACTCAGTACCTTCCA
FD564586       --> ..................................................
FD579771       --> ..................................................
EX895645       --> ..................................................
EX896865       --> ..................................................
EY896701       --> ..................................................
FD543571       --> ..................................................
FD946761       --> ..................................................
FD970117       --> ..................................................
FD981146       --> ..................................................
EV528677       --> ..................................................
EY947373       --> ..................................................
FD564274       --> ..................................................
EV536969       --> ..................................................
EV538043       --> ..................................................
FD544270       --> ..................................................
EX889584       --> ..................................................
EV538830       --> TACTCTGTTTGGAT....................................
FD542732       --> TACTCTGTTTGGATTGGAGGGTCCATCTTGGCTTCACT--GTACCTTCCA
EW714932       --> TACTCTGTTTGGATTGGAGGGTCCATCTTGGCTTCACTCAGTACCTTCCA

               1101   -   1151
UN23136        --> GCAGATGTGGATTGCTAAGGCAGAGTATGACGAGTCAGGCCCGTCTATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542759       <-- GCAGATGTGGATTGCTAAGGCAGAGTATGACGAGTCAGGCCCGTCTATTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893279       <-- GCAGATGTGGATTGCTAAGGCAGAGTATGACGAGTCAGGCCCGTCCATTG  Raphanus sativus var. oleiformis
FD966557       <-- GCAGATGTGGATTGCTAAGGCAGAGTATGACGAGTCAGGCCCGTCTATTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542142       <-- GCAGATGTGGATTGCTAAGGCAGAGTATGACGAGTCAGGCCCGTCTATTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976925       <-- GCAGATGTGGATTGCTAAGGCAGAGTATGACGAGTCAGGCCCGTCCATTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893186       <-- GCAGATGTGGATTGCTAAGGCAGAGTATGACGAGTCAGGCCCGTCCATTG  Raphanus raphanistrum subsp. maritimus
FD583696       <-- GCAGATGTGGATTGCTAAGGCAGAGTATGACGAGTCAGGCCCGTCCATTG  Raphanus sativus cv Rat-Tail Radish #3870
FD942820       <-- GCAGATGTGGATTGCTAAGGCAGAGTATGACGAGTCAGGCCCGTCTATTG  Raphanus sativus cv Early Scarlet Globe
EX899692       <-- GCAGATGTGGATTGCTAAGGCAGAGTATGACGAGTCAGGCCCGTCTATTG  Raphanus sativus cv Early Scarlet Globe
EV541304       <-- GCAGATGTGGATTGCTAAGGCAGAGTATGACGAGTCAGGCCCGTCTATTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547742       <-- GCAGATGTGGATTGCTAAGGCAGAGTATGACGAGTCAGGCCCGTCCATTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD568036       <-- GCAGATGTGGATTGTTAAGGCAGAGTATGACGAGTCAGGCCCGTCCATTG  Raphanus sativus var. oleiformis
FD539919       <-- GCAGATGTGGATTGCTAAGGCAGAGTATGACGAGTCAGGCCCGTCTATTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564586       --> ..................................................  Raphanus sativus var. oleiformis
FD579771       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX895645       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX896865       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY896701       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD543571       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946761       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD970117       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981146       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528677       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY947373       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD564274       --> ..................................................  Raphanus sativus var. oleiformis
EV536969       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538043       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544270       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889584       --> ..................................................  Raphanus sativus var. oleiformis
EV538830       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542732       --> GCAGATGTGGATTGCTAAGGCAGAGTATGACGAGTCAGGCCCGTCTATTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714932       --> GCAGATGTGGATTGCTAAGGCAGAGTATGACGAGTCAGGCCCGTCCATTG  Raphanus sativus var. oleiformis

               1151   -   1201
UN23136        --> TTCACAGGAAGTGCTTCTAA-GTA-TGAAGTTCATCATTTTTCAGACAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542759       <-- TTCACAGGAAGTGCTTCTAA-GTA-TGAAGTTCATCATTTTTCAGACAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893279       <-- TTCACAGGAAGTGCTTCTAA-GTAATGAAGTTCATCATTTTTCAGACAAG  Raphanus sativus var. oleiformis
FD966557       <-- TTCACAGGAAGTGCTTCTAA-GTA-TGAAGTTCATCATTTTTCAGACAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542142       <-- TTCACAGGAAGTGCTTCTAA-GTA-TGAAGTTCATCATTTTTCAGACAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976925       <-- TTCACAGGAAGTGCTTTTAA-GTAATGAAGTTCATCATTTTTCAGACAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893186       <-- TTCACAGGAAGTGCTTTTAA-GTAATGAAGTTCATCATTTTTCAGACAAG  Raphanus raphanistrum subsp. maritimus
FD583696       <-- TTCACAGGAAGTGCTTTTAA-GTAATGAAGTTCATCATTTTTTAGACAAG  Raphanus sativus cv Rat-Tail Radish #3870
FD942820       <-- TTCACAGGAAGTGCTTCTAAAGTA-TGAAGTTCATCATTTTTCAGACAAG  Raphanus sativus cv Early Scarlet Globe
EX899692       <-- TTCACAGGAAGTGCTTCTAAAGTA-TGAAGTTCATCATTTTTCAGACAAG  Raphanus sativus cv Early Scarlet Globe
EV541304       <-- TTCACAGGAAGTGCTTCTAA-GTA-TGAAGTTCATCATTTTTCAGACAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547742       <-- TTCACAGGAAGTGCTTCTAA-GTAATGAAGTTCATCATTTTTCAGACAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD568036       <-- TTCACAGGAAGTGCTTTTAA-GTAATGAAGTTCATCATTTTTCAGACAAG  Raphanus sativus var. oleiformis
FD539919       <-- TTCACAGGAAGTGCTTCTAA-GTA-TGAAGTTCATCATTTTTCAGACAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564586       --> ..................................................  Raphanus sativus var. oleiformis
FD579771       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX895645       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX896865       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY896701       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD543571       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946761       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD970117       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981146       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528677       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY947373       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD564274       --> ..................................................  Raphanus sativus var. oleiformis
EV536969       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538043       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544270       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889584       --> ..................................................  Raphanus sativus var. oleiformis
EV538830       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542732       --> TTCACAGGAAGTGCTTCTAA-GTA-TGAAGTTCATCATTTTTCAGACAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714932       --> TTCACAGGAAGTGCTTCTAA-GTAGTGAAGTTCATCATTTTTCAGACAAG  Raphanus sativus var. oleiformis

               1201   -   1251
UN23136        --> AAGCAAGCTACTCTTT-GTTTT-GGTT-CTTTTATATTCATTTTATTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542759       <-- AAGCAAGCTACTCTTT-GTTTT-GGTT-CTTTTATATTCATTTTATTTGA
EX893279       <-- AAGCAAGCTACTCTTT-GTTTT-GGTT-CTTTTATATTCATTTTATTTGA
FD966557       <-- AAGCAAGCTACTCTTT-GTTTT-GGTT-CTTTTATATTCATTTTATTTGA
EV542142       <-- AAGCAAGCTACTCTTT-GTTTT-GGTT-CTTTTATATTCATTTTATTTGA
FD976925       <-- AAGCGAGCTACTCTTT-GTTTT-GGTTTCTTTTATATTCATTTTATTTGA
EY893186       <-- AAGCGAGCTACTCTTT-GTTTT-GGTTTCTTTTATATTCATTTTATTTGA
FD583696       <-- AAGCAAGCTACTCTTT-GTTTT-GGTT-CTTTTATATTCATTTTATTTGA
FD942820       <-- AAGCAAGCTACTCTTT-GTTTT-GGTT-CTTTTATATTCATTTTATTTGA
EX899692       <-- AAGCAAGCTACTCTTT-GTTTT-GGTT-CTTTTATATTCATTTTATTTGA
EV541304       <-- AAGCAAGCTACTCTTT-GTTTT-GGTT-CTTTTATATTCATTTTATTTGA
FD547742       <-- AAGCGAGCTACTCTTT-GTTTT-GGTTTCTTTTATATTCATTTTATTTGA
FD568036       <-- AAGCAAGCTACTCTTT-GTTTT-GGTT-TTTTTATATTCATTTTATTTGA
FD539919       <-- AAGCAAGCTACTCTTT-GTTTT-GGTT-CTTTTATATTCATTTTATTTGA
FD564586       --> ..................................................
FD579771       --> ..................................................
EX895645       --> ..................................................
EX896865       --> ..................................................
EY896701       --> ..................................................
FD543571       --> ..................................................
FD946761       --> ..................................................
FD970117       --> ..................................................
FD981146       --> ..................................................
EV528677       --> ..................................................
EY947373       --> ..................................................
FD564274       --> ..................................................
EV536969       --> ..................................................
EV538043       --> ..................................................
FD544270       --> ..................................................
EX889584       --> ..................................................
EV538830       --> ..................................................
FD542732       --> AAGCAAGCTACTCTTT-GTTTT-GGTT-CTTTTATATTCATTTTATTTGA
EW714932       --> AAGCAAGCTACTCTTTTGTTTTTGGTT-CTTTTATATTCATTTTATTTGA

               1251   -   1301
UN23136        --> GTTCAACTTTCTTTTGAGTTAATAATGATTGATGACACATCTTTCTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542759       <-- GTTCAACTTTCTTTTGAGTTAATAATGATTGATGACACATCTTTCTCTTT
EX893279       <-- GTTCAACTTTCTTTTGAGTTAATAATGATTGATGACACATCTTTCTCTTT
FD966557       <-- GTTCAACTTTCTTTTGAGTTAATAATGATTGATGATACATCTTTCTCTTT
EV542142       <-- GTTCAACTTTCTTTTGAGTTAATAATGATTGATGACACATCTTTCTCTTT
FD976925       <-- GTTCAACTTTCTTTTGAGTTAATAATGATTGATGACACATCTTTCTCTTT
EY893186       <-- GTTCAACTTTCTTTTGAGTTAATAATGATTGATGACACATCTTTCTCTTT
FD583696       <-- GTTCAACTTTCTTTTGAGTTAATAATGATTGATGACACATCTTTCTCTTT
FD942820       <-- GTTCAACTTTCTTTTGAGTTAATAATGATTGATGACACATCTTTCTCTTT
EX899692       <-- GTTCAACTTTCTTTTGAGTTAATAATGATTGATGACACATCTTTCTCTTT
EV541304       <-- GTTCAACTTTCTTTTGAGTTAATAATGATTGATGACACATCTTTCTCTTT
FD547742       <-- GTTCAACTTTCTTTTGAGTTAATAATGATTGATGACACATCTTTCTCTTT
FD568036       <-- GTTCAACTTTTTTTTGAGTTAATAATGATTGATGACACATttt.......
FD539919       <-- GTTCAACTTTCTTTTGAGTTAATAATGATTGATGAC..............
FD564586       --> ..................................................
FD579771       --> ..................................................
EX895645       --> ..................................................
EX896865       --> ..................................................
EY896701       --> ..................................................
FD543571       --> ..................................................
FD946761       --> ..................................................
FD970117       --> ..................................................
FD981146       --> ..................................................
EV528677       --> ..................................................
EY947373       --> ..................................................
FD564274       --> ..................................................
EV536969       --> ..................................................
EV538043       --> ..................................................
FD544270       --> ..................................................
EX889584       --> ..................................................
EV538830       --> ..................................................
FD542732       --> GTTCAACTTTCTTTTGAGT-AATAATGATTGATGACACATCTTTCTCTTT
EW714932       --> GTTCAACTTTCTTTTGAGTAAATAATGATTGATGACACATCTTTCTCTTT

               1301   -   1351
UN23136        --> TAACTATTTTATAGCAATGTGGTTCATGTGCTATGTCTGTTTTATATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542759       <-- TAACTATTTTATAGCAATGTGGTTCATGTGCc..................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893279       <-- TAACTATTATATAGCAATGTGGTTCATGTGC...................  Raphanus sativus var. oleiformis
FD966557       <-- TAACTATTTTATAGCAATGTGGTTCATGTGCT..................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542142       <-- TAACTATTTTATAGCAATGTGGTTCATGTGC...................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976925       <-- TAACTATTat........................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893186       <-- TAACTATTATATTGCAATGTGGTTCATGTGCTATGTCTGTTTTATATTTT  Raphanus raphanistrum subsp. maritimus
FD583696       <-- TAACTATTATATAGCAATGTGGTTCATGTGCTATGTCTGTTTTATATTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD942820       <-- TAACTATTTTGTAGCAATGTGGTTCATGTGCTATGTCTGTTTTCTATTTT  Raphanus sativus cv Early Scarlet Globe
EX899692       <-- TAACTATTTTGTAGCAATGTGGTTCATGTGCTATGTCTGTTTTCTATTTT  Raphanus sativus cv Early Scarlet Globe
EV541304       <-- TAACTATTTTATAGCAATGTGGTTCGTGTac...................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547742       <-- TAACTATTATATTGCAATGTGGTTCATGTGCTATGTCTGTTTTATATTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD568036       <-- ..................................................  Raphanus sativus var. oleiformis
FD539919       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564586       --> ..................................................  Raphanus sativus var. oleiformis
FD579771       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX895645       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX896865       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY896701       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD543571       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946761       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD970117       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD981146       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV528677       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY947373       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD564274       --> ..................................................  Raphanus sativus var. oleiformis
EV536969       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538043       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544270       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889584       --> ..................................................  Raphanus sativus var. oleiformis
EV538830       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542732       --> TA-CTATTTTATAGCAATGTGGTTCA........................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714932       --> TAACTATTATATAGCAATGTGGTTCATGT.....................  Raphanus sativus var. oleiformis

               1351   -   1401
UN23136        --> CTACACTTTTA-TCAATTAAAGTTGCGAACAATTGAAACTTTTTCATGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542759       <-- ..................................................
EX893279       <-- ..................................................
FD966557       <-- ..................................................
EV542142       <-- ..................................................
FD976925       <-- ..................................................
EY893186       <-- CTACACTTTTA-TCAATTAAAGTTttgaacg...................
FD583696       <-- CTA--CTTTTA-TCAATTAAAGTTGCGAACAATTGAAACTTTTTCATGCC
FD942820       <-- CTACACTTTTAATCAATTAAAGTTctgaact...................
EX899692       <-- CTACACTTTTAATCAATTAAAGTTctg.......................
EV541304       <-- ..................................................
FD547742       <-- CTACACTTTTA-TCAATTAAAGTTttg.......................
FD568036       <-- ..................................................
FD539919       <-- ..................................................
FD564586       --> ..................................................
FD579771       --> ..................................................
EX895645       --> ..................................................
EX896865       --> ..................................................
EY896701       --> ..................................................
FD543571       --> ..................................................
FD946761       --> ..................................................
FD970117       --> ..................................................
FD981146       --> ..................................................
EV528677       --> ..................................................
EY947373       --> ..................................................
FD564274       --> ..................................................
EV536969       --> ..................................................
EV538043       --> ..................................................
FD544270       --> ..................................................
EX889584       --> ..................................................
EV538830       --> ..................................................
FD542732       --> ..................................................
EW714932       --> ..................................................

               1401   -   1451
UN23136        --> TACACTCAA
                   ~~~~~~~~~
EV542759       <-- .........
EX893279       <-- .........
FD966557       <-- .........
EV542142       <-- .........
FD976925       <-- .........
EY893186       <-- .........
FD583696       <-- TACACTCAA
FD942820       <-- .........
EX899692       <-- .........
EV541304       <-- .........
FD547742       <-- .........
FD568036       <-- .........
FD539919       <-- .........
FD564586       --> .........
FD579771       --> .........
EX895645       --> .........
EX896865       --> .........
EY896701       --> .........
FD543571       --> .........
FD946761       --> .........
FD970117       --> .........
FD981146       --> .........
EV528677       --> .........
EY947373       --> .........
FD564274       --> .........
EV536969       --> .........
EV538043       --> .........
FD544270       --> .........
EX889584       --> .........
EV538830       --> .........
FD542732       --> .........
EW714932       --> .........