1      -     51
UN23144        --> GAAAATAATCATACCATTAAAACACCTTTGAAATCATCATATACAACACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755588       <-- ........TCATACCATTAAAACACCTTTGAAATCATCATATACAACACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765865       <-- ........TCATACCATTAAAACACCTTTGAAATC---ATATACAACACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562415       <-- ........TCATACCATTAAAACACCTTTGAAATTATCATATACAACACA  Raphanus sativus var. oleiformis
FD940360       <-- ........TCATACCATTAAAACACCTTTGAAATTATCATATACAACACA  Raphanus sativus var. oleiformis
EV538606       <-- .............................GAAATCATCATATACAACACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542728       <-- .............................GAAATCATCATATACAACACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW734951       <-- ..................................aATCATATACAACACA  Raphanus sativus cv Rat-Tail Radish #3870
EV538794       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD576212       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX902662       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX904989       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD970805       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909142       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954464       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD970151       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543194       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906709       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915829       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969900       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971581       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542727       --> GAAAATAATCATACCATTAAAACACCTTTGAAATCATCATATACAACACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD950721       --> GAAAATAATCATACCATTAAAACACCTTTGAAATTATCATATACAACACA  Raphanus sativus cv Rat-Tail Radish #3870
EW738423       --> ........TCATACCATTAAAACACCTTTGAAATCAT---ATACAACACA  Raphanus sativus cv Rat-Tail Radish #3870
EW738564       --> ........TCATACCATTAAAACACCTTTGAAATCAT---ATACAACACA  Raphanus sativus cv Rat-Tail Radish #3870
EX759636       --> ........TCATACCATTAAAACACCTTTGAAATCATCATATACAACACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX908159       --> ........TCATACCATTAAAACACCTTTGAAATCATCATATACAACACA  Raphanus sativus cv Rat-Tail Radish #3870
EY902810       --> ........TCATACCATTAAAACACCTTTGAAATCATCATATACAACACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904709       --> ........TCATACCATTAAAACCCCTTTGAAATCATCATATACAACACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911599       --> ........TCATACCATTAAAACACCTTTGAAATCAT---ATACAACACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538726       --> ........TCATACCATTAAAACACCTTTGAAATCATCATATACAACACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539080       --> ........TCATACCATTAAAACACCTTTGAAATCATCATATACAACACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD580751       --> ........TCATACCATTAAAACACCTTTGAAATTATCATATACAACACA  Raphanus sativus cv Rat-Tail Radish #3870
FD936261       --> ........TCATACCATTAAAACACCTTTGAAATTATCATATACAACACA  Raphanus sativus var. oleiformis
FD966392       --> ........TCATACCATTAAAACACCTTTGAAATCATCATATACAACACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967971       --> ........TCATACCATTAAAACACCTTTGAAATCATCATATACAACACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX908782       --> .............CCATTAAAACACCTTTGAAATTATCATATACAACACA  Raphanus sativus cv Rat-Tail Radish #3870

               51     -    101
UN23144        --> TAACAAGGAAAAGCTGAAATCAACAAAGGAAATAATAAAAA-GCCAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755588       <-- TAACAAGGAAAAGCTGAAATCAACAAAGGAAATAATAAAAA-GCCAACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765865       <-- TAACAAGGAAAAGCTGAAATCAACAAAGGAAATAATGAAAA-GCCAACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562415       <-- TAACAAGGAAAAGCTGAAATCAACAAAGGAAATAATAAAAA-GCCAACAA  Raphanus sativus var. oleiformis
FD940360       <-- TAACAAGGAAAAGCTGAAATCAACAAAGGAAATAATAAAAA-GCCAACAA  Raphanus sativus var. oleiformis
EV538606       <-- TAACAAGGAAAAGCTGAAATCAACAAAGGAAATAATAAAAA-GCCAACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542728       <-- TAACAAGGAAAAGCTGAAATCAACAAAGGAAATAATAAAAA-GCCAACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW734951       <-- TAACAAGGAAA-GCTGAAATCAACAAAGGAAATAATGAAAA-GCCAACAA  Raphanus sativus cv Rat-Tail Radish #3870
EV538794       <-- ....................................AAAAA-GCCAACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD576212       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX902662       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX904989       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD970805       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909142       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954464       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD970151       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543194       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906709       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915829       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969900       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971581       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542727       --> TAACAAGGAAAAGCTGAAATCAACAAAGGAAATAATAAAAA-GCCAACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD950721       --> TAACAAGGAAAAGCTGAAATCAACAAAGGAAATAATAAAAA-GCCAACAA  Raphanus sativus cv Rat-Tail Radish #3870
EW738423       --> TAACAAGGAAAAGCTGAAATCAACAAAGGAAATAATGAAAA-GCCAACAA  Raphanus sativus cv Rat-Tail Radish #3870
EW738564       --> TAACAAGGAAAAGCTGAAATCAACAAAGGAAATAATGAAAA-GCCAACAA  Raphanus sativus cv Rat-Tail Radish #3870
EX759636       --> TAACAAGGAAAAGCTGAAATCAACAAAGGAAATAATAAAAA-GCCAACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX908159       --> TAACAAGGGAAAGCTGAAATCAACAAAGGAAATAATAAAAAAGCCAACAA  Raphanus sativus cv Rat-Tail Radish #3870
EY902810       --> TAACAAGGAAAAGCTGAAATCAACAAAGGAAATAATAAAAA-GCCAACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904709       --> TAACAAGGAAAAGCGGAAATCAACAAAGGAAATAATAAAAA-GCCAACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911599       --> TAACAAGGAAAAGCTGAAATCAACAAAGGAAATAATGAAAA-GCCAACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538726       --> TAACAAGGAAAAGCTGAAATCAACAAAGGAAATAATAAAAA-GCCAACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539080       --> TAACAAGGAAAAGCTGAAATCAACAAAGGAAATAATAAAAA-GCCAACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD580751       --> TAACAAGGAAAAGCTGAAATCAACAAAGGAAATAATAAAAA-GCCAACAA  Raphanus sativus cv Rat-Tail Radish #3870
FD936261       --> TAACAAGGAAAAGCTGAAATCAACAAAGGAAATAATAAAAA-GCCAACAA  Raphanus sativus var. oleiformis
FD966392       --> TAACAAGGAAAAGCTGAAATCAACAAAGGAAATAATAAAAA-GCCAACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967971       --> TAACAAGGAAAAGCTGAAATCAACAAAGGAAATAATAAAAA-GCCAACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX908782       --> TAACAAGGAAAAGCTGAAATCAACAAAGGAAATAATAAAAA-GCCAACAA  Raphanus sativus cv Rat-Tail Radish #3870

               101    -    151
UN23144        --> ACTTCCAACAACACAAAAGCAAAAGATGATCATATCATTCAACACAA-GA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755588       <-- ACTTCCAACAACACAAAAGCAAAAGATGATCATATCATTCAACACAA-GA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765865       <-- ACTTCCAACAACACAAAAGCAAAAGATGATCA--TCATTCAACACAAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562415       <-- ACTTCCAACAACACAAAAGCAAAAGATGATCATATCATTCAACACAA-GA  Raphanus sativus var. oleiformis
FD940360       <-- ACTTC-AACAACACAAAAGCAAAAGATGATCATATCATTCAACACAA-GA  Raphanus sativus var. oleiformis
EV538606       <-- ACTTCCAACAACACAAAAGCAAAAGATGATCATATCATTCAACACAA-GA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542728       <-- ACTTCCAACAACACAAAAGCAAAAGATGATCA--TCATTCAACACAAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW734951       <-- ACTTCCAACAACACAAAAGCAAAAGATGATCA--TCATTCAACACAAAGA  Raphanus sativus cv Rat-Tail Radish #3870
EV538794       <-- ACTTACAACAACACAAAAGCAAAAGATGATCATATCATTCAACACAA-GA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD576212       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX902662       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX904989       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD970805       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909142       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954464       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD970151       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543194       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906709       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915829       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969900       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971581       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542727       --> ACTTACAACAACACAAAAGCAAAAGATGATCATATCATTCAACACAA-GA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD950721       --> ACTTCCAACAACACAAAAGCAAAAGATGATCATATCATTCAACACAA-GA  Raphanus sativus cv Rat-Tail Radish #3870
EW738423       --> ACTTCCAACAACACAGAAGCAAAAGATGATCAT--CATTCAACACAAAGA  Raphanus sativus cv Rat-Tail Radish #3870
EW738564       --> ACTTCCAACAACACAAAAGCAAAAGATGATCAT--CATTCAACACAAAGA  Raphanus sativus cv Rat-Tail Radish #3870
EX759636       --> ACTTCCAACAACACAAAAGCAAAAGATGATCATATCATTCAACACAA-GA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX908159       --> ACTTCCAACAACACAAAAGCAAAAGATGATCAT--CATTCAACAAAA-GA  Raphanus sativus cv Rat-Tail Radish #3870
EY902810       --> ACTTCCAACAACACAAAAGCAAAAGATGATCAT--CATTCAACACAAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904709       --> ACTTCCAACAACACAAAAGCAAAAAATGATCATATCATTCAACACAA-AA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911599       --> ACTTCCAACAACACAAAAGCAAAAGATGATCAT--CATTCAACACAAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538726       --> ACTTCCAACAACACAAAAGCAAAAGATGATCAT--CATTCAACACAAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539080       --> ACTTCCAACAACACAAAAGCAAAAGATGATCATATCATTCAACACAA-GA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD580751       --> ACTTCCAACAACACAAAAGCAAAAGATGATCATATCATTCAACACAA-GA  Raphanus sativus cv Rat-Tail Radish #3870
FD936261       --> ACTTC-AACAACACAAAAGCAAAAGATGATCATATCATTCAACACAA-GA  Raphanus sativus var. oleiformis
FD966392       --> ACTTCCAACAACACAAAAGCAAAAGATGATCATATCATTCAACACAA-GA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967971       --> ACTTCCAACAACACAAAAGCAAAAGATGATCAT--CATTCAACACAAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX908782       --> ACTTCCAACAACACAAAAGCAAAAGATGATCATATCATTCAACACAA-GA  Raphanus sativus cv Rat-Tail Radish #3870

               151    -    201
UN23144        --> ACACATCATGAT--TTCATATCTTTAATGATCATCCTTATCCTTCTTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755588       <-- ACACATCATGAT--TTCATATCTTTAATGATCATCCTTATCCTTCTTTTC
EX765865       <-- ACACATCATGAT--TTCATATCTTTAATGATCATCCTTATCCTTCTTTTC
FD562415       <-- ACACATCATGAT--TTCATATCTTTAATGATCATCCTTATCCTTCTTTTC
FD940360       <-- ACACATCATGAT--TTCATATCTTTAATGATCATCCTTATCCTTCTTTTC
EV538606       <-- ACACATCATGAT--TTCATATCTTTAATGATCATCCTTATCCTTCTTTTC
FD542728       <-- ACACATCATGAT--TTCATATCTTTAATGATCATCCTTATCTTTCTTTTC
EW734951       <-- ACACATCATGAT--TTCATATCTTTAATGATCATCTTTATCCTTCTTTTC
EV538794       <-- ACACATCATGAT--TTCATATCTTTAATGATCATC-TTATCATTCTTTTC
FD576212       <-- ............................................CTTTTC
EX902662       <-- .............................................TTTTC
EX904989       <-- .............................................TTTTC
FD970805       <-- .............................................TTTTC
EY909142       <-- ..............................................TTTC
FD954464       <-- ..................................................
FD970151       <-- ..................................................
FD543194       <-- ..................................................
EY906709       <-- ..................................................
EY915829       <-- ..................................................
FD969900       <-- ..................................................
FD971581       <-- ..................................................
EV542727       --> ACACATCATGAT--TTCATATCTTTAATGATCATCCTTATCCTTCTTTTC
FD950721       --> ACACATCATGAT--TTCATATCTTTAATGATCATCCTTATCCTTCTTTTC
EW738423       --> ACACATCATGAT--TTCATATCTTTAATGATCATCCTTATCCTTCTTTTC
EW738564       --> ACACATCATGAT--TTCATATCTTTAATGATCATCCTTATCCTTCTTTTC
EX759636       --> ACACATCATGAT--TTCATATCTTTAATGATCATCCTTATCCTTCTTTTC
EX908159       --> ACACATCATCATGATTCATATCTTTAATGATCATCCTTATCCTTCTTTTC
EY902810       --> ACACATCATGAT--TTCATATCTTTAATGATCATCCTTATCCTTCTTTTC
EY904709       --> ACACATCATGAT--TTCATATCTTTAATGATCATCCTTATCCTTCTTTTC
EY911599       --> ACACATCATGAT--TTCATATCTTTAATGATCATCCTTATCCTTCTTTTC
FD538726       --> ACACATCATGAT--TTCATATCTTTAATGATCATCCTTATCCTTCTTTTC
FD539080       --> ACACATCATGAT--TTCATATCTTTAATGATCATCCTTATCCTTCTTTTC
FD580751       --> ACACATCATGAT--TTCATATCTTTAATGATCATCCTTATCCTTCTTTTC
FD936261       --> ACACATCATGAT--TTCATATCTTTAATGATCATCCTTATCCTTCTTTTC
FD966392       --> ACACATCATGAT--TTCATATCTTTAATGATCATCCTTATCCTTCTTTTC
FD967971       --> ACACATCATGAT--TTCATATCTTTAATGATCATCCTTATCCTTCTTTTC
EX908782       --> ACACATCATGAT--TTCATATCTTTAATGATCATCCTTATCCTTCTTTTC

               201    -    251
UN23144        --> CTCCTCTACAGTCTTGGGATGGTAGCCTGGAAGCTTCTCCTTAATCTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755588       <-- CTCCTCTACAGTCTTGGGATGGTAGCCTGGAAGCTTCTCCTTAATCTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765865       <-- CTCCTCTACAGTCTTGGGATGGTAGCCTGGAAGCTTCTCCTTAATCTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562415       <-- CTCCTCTACAGTCATGGGATGGTACCCTGGAAGCTTCTCCTTAATCTTCT  Raphanus sativus var. oleiformis
FD940360       <-- CTCCTCTACAGTCTTGGGATGGTACCCTGGAAGCTTCTCCTTAATCTTCT  Raphanus sativus var. oleiformis
EV538606       <-- CTCCTCTACAGTCTTGGGATGGTAGCCTGGAAGCTTCTCCTTAATCTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542728       <-- CTCCTCTACAGTCTTGGGATGGTAGCCTGGAAGCTTCTCCTTGATCTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW734951       <-- CTCCTCTACAGTCTTGGGATGGTAGCCTGGAAGCTTCTCCTTAATCTTCT  Raphanus sativus cv Rat-Tail Radish #3870
EV538794       <-- CTCCTCTACAGTCTTGGGATGGTAGCCTGGAAGCTTCTCTTTAATCTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD576212       <-- CTCCTCTACAGTCTTGGGATGGTACCCTGGAAGCTTCTCCTTAATCTTCT  Raphanus sativus cv Rat-Tail Radish #3870
EX902662       <-- CTCCTCCACAGTCTTGGGATGGTAGCCTGGAAGCTTCTCCTTGATCTTCT  Raphanus sativus cv Rat-Tail Radish #3870
EX904989       <-- CTCCTCTACAGTCTTGGGATGGTACCCTGGAAGCTTCTCTTTAATCTTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD970805       <-- CTCCTCTACAGTCTTGGGATGGTAGCCTGGAAGCTTCTCCTTAATCTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909142       <-- CTCCTCTACGGTCTTGGGATGGTAGCCTGGAAGCTTCTCTTTAATCTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954464       <-- ...CTCTACAGTCTTGGGATGGTACCCTGGAAGCTTCTCTTTAATCTTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD970151       <-- ....TCTACAGTCTTGGGATGGTAGCCTGGAAGCTTCTCCTTAATCTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543194       <-- .............................................CTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906709       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915829       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969900       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971581       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542727       --> CTCCTCTACAGTCTTGGGATGGTAGCCTGGAAGCTTCTCCTTAATCTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD950721       --> CTCCTCTACAGTCTTGGGATGGTACCCTGGAAGCTTCTCCTTAATCTTCT  Raphanus sativus cv Rat-Tail Radish #3870
EW738423       --> CTCCTCTACAGTCTTGGGATGGTAGCCTGGAAGCTTCTCCTTAATCTTCT  Raphanus sativus cv Rat-Tail Radish #3870
EW738564       --> CTCCTCTACAGTCTTGGGATGGTAGCCTGGAAGCTTCTCCTTAATCTTCT  Raphanus sativus cv Rat-Tail Radish #3870
EX759636       --> CTCCTCTACAGTCTTGGGATGGTAGCCTGGAAGCTTCTCCTTAATCTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX908159       --> CTCCTCCACAGTCTTGGGATGGTAGCCTGGAAGCTTCTCCTTGATCTTCT  Raphanus sativus cv Rat-Tail Radish #3870
EY902810       --> CTCCTCTACAGTCTTGGGATGGTAGCCTGGAAGCTTCTCCTTGATCTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904709       --> CTCCTCTACGGTCTTGGGATGGTAGCCTGGAAGCTTCTCCTTAATCTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911599       --> CTCCTCTACAGTCTTGGGATGGTAGCCTGGAAGCTTCTCCTTAATCTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538726       --> CTCCTCTACAGTCTTGGGATGGTAGCCTGGAAGCTTCTCCTTGATCTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539080       --> CTCCTCTACAGTCTTGGGATGGTAGCCTGGAAGCTTCTCCTTAATCTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD580751       --> CTCCTCTACAGTCTTGGGATGGTACCCTGGAAGCTTCTCCTTAATCTTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD936261       --> CTCCTCTACAGTCTTGGGATGGTACCCTGGAAGCTTCTCCTTAATCTTCT  Raphanus sativus var. oleiformis
FD966392       --> CTCCTCTACAGTCTTGGGATGGTAGCCTGGAAGCTTCTCCTTAATCTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967971       --> CTCC-CTACAGTCTTGGGATGGTAGCCTGGAAGCTTCTCCTTGATCTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX908782       --> CTCCTCTACAGTCTTGGGATGGTACCCTGGAAGCTTCTCCTTAATCTTCT  Raphanus sativus cv Rat-Tail Radish #3870

               251    -    301
UN23144        --> CCAAGATCCCCTT-CTTCTCCGCCGGATGCGCTTCCTCCACCGGAGGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755588       <-- CCAAGATCCCCTT-CTTCTCCGCCGGATGCGCTTCCTCCACCGGAGGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765865       <-- CCAAGATCCCCTT-CTTCTCCGCCGGATGCGCTTCCTCCACCGGAGGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562415       <-- CCAAGATCCCCTT-CTTCTCCACCGGATGCGCTTCCTCCACCGGAGGTGC  Raphanus sativus var. oleiformis
FD940360       <-- CCAAGATCCCCTT-CTTCTCCACCGGATGCGCTTCCTCCACCGGAGGTGC  Raphanus sativus var. oleiformis
EV538606       <-- CCAAGATCCCCTT-CTTCTCCGCCGGATGCGCTTCCTCCACCGGAGGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542728       <-- CCAAGATCCCCTT-CTTCTCCGCCGGATGCGCTTCCTCCACCGGAGGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW734951       <-- CCAAGATCCCCTT-CTTCTCCGCCGGATGCGCTTCCTCCACCGGAGGAGC  Raphanus sativus cv Rat-Tail Radish #3870
EV538794       <-- CCAAGATCCCCTTTCTTCTCCGCCGGATGCGCTTCCTCCACCGGAGGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD576212       <-- CCAAGATCCCCTT-CTTCTCCACCGGATGCGCTTCCCCCACCGGAGGTGC  Raphanus sativus cv Rat-Tail Radish #3870
EX902662       <-- CCAAGATCCCCTT-CTTCTCCGCCGGATGCGCTTCCTCCACCGGAGGAGC  Raphanus sativus cv Rat-Tail Radish #3870
EX904989       <-- CCAAGATCCCCTT-CTTCTCCACCGGATGCGCTTCCTCCACCGGAGGTGC  Raphanus sativus cv Rat-Tail Radish #3870
FD970805       <-- CCAAGATCCCCTT-CTTCTCCGCCGGATGCGCTTCCTCCACCGGAGGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909142       <-- CCAAGATCCCTTT-CTTCTCCGCCGGATGCGCTTCCTCCACCGGAGGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954464       <-- CCAAGATCCCCTT-CTTCTCCACCGGATGCGCTTCCTCCACCGGAGGTGC  Raphanus sativus cv Rat-Tail Radish #3870
FD970151       <-- CCAAGATCCCCTT-CTTCTCCGCCGGATGCGCTTCCTCCACCGGAGGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543194       <-- CCAAGATCCCCTT-CTTCTCCGCCGGATGCGCTTCCTCCACCGGAGGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906709       <-- ..............CTTCTCCGCGGGATGCGCTTCCTCCACCGGAGGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915829       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969900       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971581       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542727       --> CCAAGATCCCCTT-CTTCTCCGCCGGATGCGCTTCCTCCACCGGAGGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD950721       --> CCAAGATCCCCTT-CTTCTCCACCGGATGCGCTTCCTCCACCGGAGGTGC  Raphanus sativus cv Rat-Tail Radish #3870
EW738423       --> CCAAGATCCCCTT-CTTCTCCGCCGGATGCGCTTCCTCCACCGGAGGAGC  Raphanus sativus cv Rat-Tail Radish #3870
EW738564       --> CCAAGATCCCCTT-CTTCTCCGCCGGATGCGCTTCCTCCACCGGAGGAGC  Raphanus sativus cv Rat-Tail Radish #3870
EX759636       --> CCAAGATCCCCTT-CTTCTCCGCCGGATGCGCTTCCTCCACCGGAGGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX908159       --> CCAAGATCCCCTT-CTTCTCCGCCGGATGCGCTTCCTCCACCGGAGGAGC  Raphanus sativus cv Rat-Tail Radish #3870
EY902810       --> CCAAGATCCCCTT-CTTCTCCGCCGGATGCGCTTCCTCCACCGGAGGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904709       --> CCAAAATCCCCTT-CTTCTCCGCCGGATGCCCTTCCTCCACCGGA.....  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911599       --> CCAAGATCCCCTT-CTTCTCCGCCGGATGCGCTTCCTCCACCGGAGGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538726       --> CCAAGATCCCCTT-CTTCTCCGCCGGATGCGCTTCCTCCACCGGAGGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539080       --> CCAAGATCCCCTT-CTTCTCCGCCGGATGCGCTTCCTCCACCGGAGGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD580751       --> CCAAGATCCCCTT-CTTCTCCACCGGATGCGCTTCCCCCACCGGAGGTGC  Raphanus sativus cv Rat-Tail Radish #3870
FD936261       --> CCAAGATCCCCTT-CTTCTCCACCGGATGCGCTTCCTCCACCGGAGGTGC  Raphanus sativus var. oleiformis
FD966392       --> CCAAGATCCCCT--CTTCTCCGCCGGATGCGCTTCCTCCACCGGAGGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967971       --> CCAAGATCCCCTT-CTTCTCCGCCGGATGCGCTTCCTCCACCGGAGGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX908782       --> CCAAGATCCCCTT-CTTCTCCACCGGATGCGCTTCCTCCACCGGAGGTGC  Raphanus sativus cv Rat-Tail Radish #3870

               301    -    351
UN23144        --> AACAACCGGTGCGGCTGGAG---CATCTTCAGGCTTCTTCCCGTGTCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755588       <-- AACAACCGGTGCGGGTGGAG---CATCTTCAGGCTTCTTCCCGTGTCCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765865       <-- GACAACCGGTGCGGGTGAAG---CATCTTCAGGCTTCTTTCCGTGTCCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562415       <-- AACAACCGGTGCGGCTGGAG---CATCTTCAGGCTTCTTCCCGTGTCCAG  Raphanus sativus var. oleiformis
FD940360       <-- AACAACCGGTGCGGCTGGAG---CATCTTCAGGCTTCTTCCCGTGTCCAG  Raphanus sativus var. oleiformis
EV538606       <-- AACAACCGGTGCGGGTGGAG---CATCTTCAGGCTTCTTCCCGTGTCCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542728       <-- GACAACCGGTGCGGCTGGAGTAGCATCTTCAGGCTTCTTCCCGTGTCCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW734951       <-- GACAACCGGTGCGGGTGAAG---CATCTTCAGGCTTCTTTCCGTGTCCAG  Raphanus sativus cv Rat-Tail Radish #3870
EV538794       <-- AACAACCGGTGCGGGTGGAG---CATCTTCAGGCTTCTTCCCGTGTCCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD576212       <-- AACAACCGGTGCGGCTGGAG---CATCTTCAGGCTTCTTCCCGTGTCCAG  Raphanus sativus cv Rat-Tail Radish #3870
EX902662       <-- AACAACCGGTGCGGCTGGAG---CATCTTCAGGCTTCTTTCCGTGTCCAG  Raphanus sativus cv Rat-Tail Radish #3870
EX904989       <-- AACAACCGGTGCGGCTGGAG---AATCTTCAGGCTTCTTCCCGTGTCCAG  Raphanus sativus cv Rat-Tail Radish #3870
FD970805       <-- AACAACCGGTGCGAGTGGAG---CATCTTCAGGCTTCTTCCCGTGTCCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909142       <-- AACAACCGGTGCGGGTGGAG---CATCTTCAGGCTTCTTCCCGTGTCCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954464       <-- AACAACCGGTGCGGCTGGAG---CATCTTCAGGCTTCTTCCCGTGTCCAG  Raphanus sativus cv Rat-Tail Radish #3870
FD970151       <-- AACAACCGGTGCGGGTGGAG---CATCTTCAGGCTTCTTCCCGTGTCCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543194       <-- AACAACCGGTGCGGGTGGAG---CATCTTCAGGCTTCTTCCCGTGTCCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906709       <-- GACAACCGGTGCGGCTGGAGTAGCATCTTCAGGCTTCTTCCCGTGTCCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915829       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969900       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971581       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542727       --> AACAACCGGTGCGGGTGGAG---CATCTTCAGGCTTCTTCCCGTGTCCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD950721       --> AACAACCGGTGCGGCTGGAG---CATCTTCAGGCTTCTTCCCGTGTCCAG  Raphanus sativus cv Rat-Tail Radish #3870
EW738423       --> GACAACCGGTGCGGGTGAAG---CATCTTCAGGCTTCTTTCCGTGTCCAG  Raphanus sativus cv Rat-Tail Radish #3870
EW738564       --> GACAACCGGTGCGGGTGAAG---CATCTTCAGGCTTCTTTCCGTGTCCAG  Raphanus sativus cv Rat-Tail Radish #3870
EX759636       --> AACAACCGGTGCGGGTGGAG---CATCTTCAGGCTTCTTCCCGTGTCCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX908159       --> AACAACCGGTGCGGCTGGAG---CATCTTCAGGCTTCTTTCCGTGTCCAG  Raphanus sativus cv Rat-Tail Radish #3870
EY902810       --> GACAACCGGTGCGGCTGGAGTAGCATCTTCAGGCTTCTTCCCGTGTCCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904709       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911599       --> GACAACCGGTGCGGGTGAAG---CATCTTCAGGCTTCTTTCCGTGTCCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538726       --> GACAACCGGTGCGGCTGGAGTAGCATCTTCAGGCTTCTTCCCGTGTCCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539080       --> AACAACCGGTGCGGGTGGAG---CATCTTCAGGCTTCTTCCCGTGTCCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD580751       --> AACAACCGGTGCGGCTGGAG---CATCTTCAGGCTTCTTCCCGTGTCCAG  Raphanus sativus cv Rat-Tail Radish #3870
FD936261       --> AACAACCGGTGCGGCTGGAG---CATCTTCAGGCTTCTTCCCGTGTCCAG  Raphanus sativus var. oleiformis
FD966392       --> AACAACCGGTGCGGGTGGAG---CATCTTCAGGCTTCTTCCCGTGTCCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967971       --> GACAACCGGTGCGGCTGGAGTAGCATCTTCAGGCTTCTTCCCGTGTCCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX908782       --> AACAACCGGTGCGGCTGGAG---AATCTTCAGGCTTCTTCCCGTGTCCAG  Raphanus sativus cv Rat-Tail Radish #3870

               351    -    401
UN23144        --> GAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755588       <-- GAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
EX765865       <-- GAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
FD562415       <-- GAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
FD940360       <-- GAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTCTTCTC-TCCTCCTCT
EV538606       <-- GAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
FD542728       <-- GAAGCTTCTCCTTCAACTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
EW734951       <-- GAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
EV538794       <-- GAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
FD576212       <-- GAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
EX902662       <-- GAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
EX904989       <-- GAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
FD970805       <-- GAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
EY909142       <-- GAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
FD954464       <-- GAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
FD970151       <-- GAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
FD543194       <-- GAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
EY906709       <-- GAAGCTTCTCCTTCAACTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
EY915829       <-- ..................................................
FD969900       <-- ..................................................
FD971581       <-- ..................................................
EV542727       --> GAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
FD950721       --> GAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
EW738423       --> GAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
EW738564       --> GAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
EX759636       --> GAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
EX908159       --> GAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
EY902810       --> GAAGCTTCTCCTTCAACTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
EY904709       --> ..................................................
EY911599       --> GAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
FD538726       --> GAAGCTTCTCCTTCAACTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
FD539080       --> GAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
FD580751       --> GAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
FD936261       --> GAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTCTTCTC-TCCTCCTCT
FD966392       --> GAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
FD967971       --> GAAGCTTCTCCTTCAACTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT
EX908782       --> GAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTCTTCTCCTCCTCCTCT

               401    -    451
UN23144        --> GTCTTCAC-T-TC-TCCTTCACTAGTTACCTTCTTCTTGTCCTTCTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755588       <-- GTCTTCACCTCTCCTCCTTCACTAGTTACCTTCTTCTTGTCCTTCTTCTT
EX765865       <-- GTCTTCAC-C-TC-TCCTccttcactac......................
FD562415       <-- GTCTTCAC-T-TC-TCCTTCGGTAGTTACCTTCTTCTTGTCCTTCT-CTT
FD940360       <-- GTCTTCAC-T-TC-TCCTTCGGTAGTTACCTTCTT-ATGTCCTTCTTCc.
EV538606       <-- GTCTTCACCTCTCCTCCTTCACTAGTTACCTTCTTCTTGTCCTTCTTCTT
FD542728       <-- GTCTTCAC-C-TC-TCCTTCGGTAGTTACCTTCTTCTTGTCCTTCTTCTT
EW734951       <-- GTCTTCACCTCTCCTCCTTCACTAGTTACCTTCTTCTTGTCCTTCTTCTT
EV538794       <-- GTCTTCACCTCTCCTCCTTCACTAGTTACCTTCTTCTTGTCCTTCTTCTT
FD576212       <-- GTCTTCAC-C-TC-TCCTTCACTAGTTACCTTCTTCTTGTTCTTCTTCTT
EX902662       <-- ATCTTCAC-C-TC-TCCTTCGGTAGTTACCTTCTTCTTGTCCTTCTTCTT
EX904989       <-- GTCTTCAC-C-TC-TCCTTCACTAGTTACCTTCTTCTTGTCCTTCTTCTT
FD970805       <-- GTCTTCACCTCTCCTCCTTCACTAGTTACCTTCTTCTTGTCCTTCTTCTT
EY909142       <-- GTCTTCACCTCTCCTCCTTCACTAGTTACCTTCTTCTTGTCCTTCTTCTT
FD954464       <-- GTCTTCAC-C-TC-TCCTTCACTAGTTACCTTCTTCTTGTCCTTCTTCTT
FD970151       <-- GTCTTCACCTCTCCTCCTTCACTAGTTACCTTCTTCTTGTCCTTCTTCTT
FD543194       <-- GTCTTCACCTCTCCTCCTTCACTAGTTACCTTCTTCTTGTCCTTCTTCTT
EY906709       <-- GTCTTCAC-C-TC-TCCTTCGGTAGTTACCTTCTTCTTGTCCTTCTTCTT
EY915829       <-- ........................agttCCTTCTTCTTGTCCTTCTTCTT
FD969900       <-- ..................................................
FD971581       <-- ..................................................
EV542727       --> GTCTTCACCTCTCCTCCTTCACTAGTTACCTTCTTCTTGTCCTTCTTCTT
FD950721       --> GTCTTCAC-C-TC-TCCTTCACTAGTTACCTTCTTCTTGTCCTTCTTCTT
EW738423       --> GTCTTCACCTCTCCTCCTTCACTAGTTACCTTCTTCTTGTCCTTCTTCTT
EW738564       --> GTCTTCACCTCTCCTCCTTCACTAGTTACCTTCTTCTTGTCCTTCTTCTT
EX759636       --> GTCTTCACCTCTCCTCCTTCACTAGTTACCTTCTTCTTGTCCTTCTTCTT
EX908159       --> ATCTTCAC-C-TC-TCCTTCGGTAGTTACCTTCTTCTTGTCCTTCTTCTT
EY902810       --> GTCTTCAC-C-TC-TCCTTCGGTAGTTACCTTCTTCTTGTCCTTCTTCTT
EY904709       --> ..................................................
EY911599       --> GTCTTCACCTCTCCTCCTTCACTAGTTACCTTCTTCTTGTCCTTCTTCTT
FD538726       --> GTCTTCAC-C-TC-TCCTTCGGTAGTTACCTTCTTCTTGTCCTTCTTCTT
FD539080       --> GTCTTCACCTCTCCTCCTTCACTAGTTACCTTCTTCTTGTCCTTCTTCTT
FD580751       --> GTCTTCAC-C-TC-TCCTTCACTAGTTACCTTCTTCTTGTTCTTCTTCTT
FD936261       --> GTCTTCAC-T-TC-TCCTTCGGTAGTTACCTTCTT-ATGTCCTTCTTCc.
FD966392       --> GTCTTCACCTCTCCTCCTTCACTAGTCACCTTCTTCTTGTCCTTCTTCTT
FD967971       --> GTCTTCAC-C-TC-TCCTTCGGTAGTTACCTTCTTCTTGTCCTTCTTCTT
EX908782       --> GTCTTCAC-C-TC-TCCTTCACTAGTTACCTTCTTCTTGTCCTTCTTCTT

               451    -    501
UN23144        --> CTTCCTCTTCACACCATCTTCGCCTTCTTCCTCGCTTGAGGAGCTTGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755588       <-- CTTCCTCTTCACACCATCTTCGCCTTCTTCCTCGCTTGAGGAGCTTGAAG
EX765865       <-- ..................................................
FD562415       <-- CTTCCTCTTCACACCATCTTCGCCc.........................
FD940360       <-- ..................................................
EV538606       <-- CTTCCTCTTCACACCATCTTCGCCTTCTTCCTCGCTTGAGGAGCTTGAAG
FD542728       <-- CTTCCTCTTCACACCATCTTCGCCTTCTTCCTCGCTTGAGGAGCTTGAAG
EW734951       <-- CTTCCTCTTCACACCATCTTCGCCTTCTTCCTCGCTTGAGGAGCTTGAAG
EV538794       <-- CTTCCTCTTCACACCATCTTCGCCTTCTTCCTCGCTTGAGGAGCTTGAAG
FD576212       <-- CTTCCTCTTCACACCATCTTCGCCTTCTTCCTCGCTTGAGGAGCTTGAAG
EX902662       <-- CTTCCTCTTCACACCATCTTCGCCTTCTTCCTCGCTTGAGGAGCTTGAAG
EX904989       <-- CTTCCTCTTCACACCATCTTCGCCTTCTTCCTCGCTTGAGGAGCTTGGAG
FD970805       <-- CTTCCTCTCCACACCATCTTCGCCTTCTTCCTCGCTTGAGGAGCTTGAAG
EY909142       <-- CTTCCTCTTCACACCATCTTCGCCTTCTTCCTCGCTTGAGGAGCTTGAAG
FD954464       <-- CTTCCTCTTCACACCATCTTCGCCTTCTTCCTCGCTTGAGGAGCTTGAAG
FD970151       <-- CTTCCTCTTCACACCATCTTCGCCTTCTTCCTCGCTTGAGGAGCTTGAAG
FD543194       <-- CCTCCTCTTCACACCATCTTCGCCATCTACCTCGCTTGAGGAGCTTGAAG
EY906709       <-- CTTCCTCTTCACACCATCTTCGCCTTCTTCCTCGCTTGAGGAGCTTGAAG
EY915829       <-- CTTCCTCTTCACACCATCTTCGCCTTCTTCCTCGCTTGAGGAGCTTGAAG
FD969900       <-- .........................TCTTCCTCGCTTGAGGAGCT-GAAG
FD971581       <-- ..................................................
EV542727       --> CTTCCTCTTCACACCATCTTCGCCTTCTTCCTCGCTTGAGGAGCTTGAAG
FD950721       --> CTTCCTCTTCACACCATCTTCGCCTTCTTCCTCGCTTGAGGAGCTTGAAG
EW738423       --> CTTCCTCTTCACACCATCTTCGCCTTCTTCCTCGCTTGAGGAGCTTGAAG
EW738564       --> CTTCCTCTTCACACCATCTTCGCCTTCTTCCTCGCTTGAGGAGCTTGAAG
EX759636       --> CTTCCTCTTCACACCATCTTCGCCTTCTTCCTCGCTTGAGGAGCTTGAAG
EX908159       --> CTTCCTCTTCACACCATCTTCGCCTTCTTCCTCGCTTGAGGAGCTTGAAG
EY902810       --> CTTCCTCTTCACACCATCTTCGCCTTCTTCCTCGCTTGAGGAGCTTGA..
EY904709       --> ..................................................
EY911599       --> CTTCCTCTTCACACCATCTTCGCCTTCTTCCTCGCTTGAGGAGCTTGAAG
FD538726       --> CTTCCTCTTCACACCATCTTCGCCTTCTTCCTCGCTTGAGGAGCTTGAAG
FD539080       --> CCTCCTCTTCACACCATCTTCGCCATCTACCTCGCTTGAGGAGCTTGAAG
FD580751       --> CTTCCTCTTCACACCATCTTCGCCTTCTTCCTCGCTTGAGGAGCTTGAAG
FD936261       --> ..................................................
FD966392       --> CTTCCTCTTCACACCATCTTCGCCTTCTTCCTCGCTTGAGGAGCTTGAAG
FD967971       --> CTTCCTCTTCACACCATCTTCGCCTTCTTCCTCGCTTGAGGAGCTTGAAG
EX908782       --> CTTCCTCTTCACACCATCTTCGCCTTCTTCCTCGCTTGAGGAGCTTGGAG

               501    -    551
UN23144        --> AGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGACTATGATGCTTCTTCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755588       <-- AGCTGTTGCTGCGGTG..................................
EX765865       <-- ..................................................
FD562415       <-- ..................................................
FD940360       <-- ..................................................
EV538606       <-- AGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGATTATGATGCTTCTCCTCT
FD542728       <-- AGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGACTATGATGCTTCTTCTCT
EW734951       <-- AGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGACTATGATGCTTCTTCTCT
EV538794       <-- AGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGACTATGATGCTTCTTCTCT
FD576212       <-- AGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGACTATGATGCTTCTTCTCT
EX902662       <-- AGCTGTCGCTGCAGTGAAGCTTCTCGAGGAGACTATGATGCTTCTTCTCT
EX904989       <-- AGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGACTATGATGCTTCTTCTCT
FD970805       <-- AGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGACTATGGTGCTTCTTCTCT
EY909142       <-- AGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGACTATGATGCTTCTTCTCT
FD954464       <-- AGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGACTATGATGCTTCTTCTCT
FD970151       <-- AGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGACTATGATGCTTCTTCTCT
FD543194       <-- AGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGACTATGATGCTTCTTCTCT
EY906709       <-- AGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGACTATGATGCTTCTTCTCT
EY915829       <-- AGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGACTATGATGCTTCTTCTCT
FD969900       <-- AGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGACTATGATGCTTCTTCTCT
FD971581       <-- ..........................................TCTTCTCT
EV542727       --> AGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGACTATGATGCTTCTTCTCT
FD950721       --> AGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGACTATGATGCTTCTTCTCT
EW738423       --> AGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGACTATGATGCTTCTTCTCT
EW738564       --> AGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGACTATGATGCTTCTTCTCT
EX759636       --> AGCTGTTGCTGCGGTG..................................
EX908159       --> AGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGACTATGATGCTTCTTCTCT
EY902810       --> ..................................................
EY904709       --> ..................................................
EY911599       --> AGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGACTATGATGCTTCTTCTCT
FD538726       --> AGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGACTATGATGCTTCTTCTCT
FD539080       --> AGCTGTCGCTGCGGTG..................................
FD580751       --> AGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGACTATGATGCTTCTTCTCT
FD936261       --> ..................................................
FD966392       --> AGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGACTATGATGCTTCTTCTCT
FD967971       --> AGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGACTATGATGCTTCTTCTCT
EX908782       --> AGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGACTATGATGCTTCTTCTCT

               551    -    601
UN23144        --> TCTTCTTCTTCCTCGTGTTTAACCTCAGGCGCCGGCTCTGAGACGTGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755588       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765865       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562415       <-- ..................................................  Raphanus sativus var. oleiformis
FD940360       <-- ..................................................  Raphanus sativus var. oleiformis
EV538606       <-- TCTTCTTCTTCCTCGTGTTTAACCTCAGGCGCCGGCTCTGAGACGTGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542728       <-- TCTTCTTCTTCCTCGTGTTTAACCTCAGGCGCCGGCTCCGAGACGTGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW734951       <-- TCTTCT---TCCACGTGTTTAACCTCAGGCGCCGGCTCTGAGACGTGAGC  Raphanus sativus cv Rat-Tail Radish #3870
EV538794       <-- TCTTCTTCTTCCTCGTGTTTAACCTCAGGCGCCGGCTCTGAGACGTGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD576212       <-- TCTTCTTCTTTCTCGTGCTTAACCTCAGGCGCCGGCTCTGAGACGTGAAC  Raphanus sativus cv Rat-Tail Radish #3870
EX902662       <-- TCTTCTTCTTTCTCGTGCTTAACCTCAGGCGCCGGCTCTGAGACGTGAAC  Raphanus sativus cv Rat-Tail Radish #3870
EX904989       <-- TCTTCTTCTTTCTCGTGCTTAACCTCAGGCGCCGGCTCTGAGACGTGAAC  Raphanus sativus cv Rat-Tail Radish #3870
FD970805       <-- TCTTCTTCTTCCTCGTGTTTAACCTCAGGCGCCGGCTCTGAGACGTGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909142       <-- TCTTCTTCTTCCTCGTGTTTAACCTCAGGCGCCGGCTCTGAGACGTGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954464       <-- TCTTCTTCTTTCTCGTGCTTAACCTCAGGCGCCGGCTCTGAGACGTGAAC  Raphanus sativus cv Rat-Tail Radish #3870
FD970151       <-- TCTTCTTCTTCCTCGTGTTTAACCTCAGGCGCCGGCTCTGAGACGTGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543194       <-- TCTTCTTCTTCCTCGTGTTTAACCTCAGGCGCCAGCTCTGAGACGTGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906709       <-- TCTTCT---TCCTCGTGTTTAACCTCAGGCGCCGGCTCCGAGACGTGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915829       <-- TCTTCTTCTTCCACGTGTTTAACCTCAGGCGCCGGCTCTGAGACGTGAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969900       <-- TCTTCTTCTTCCTCGTGTTTAACCTCAGGCGCCGGCTCTGAGACGTGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971581       <-- TCTTCTTCTTCCTCGTGTTTA-CCTCAGGCGCCGGCTCTGAGACGTGA-C  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542727       --> TCTTCTTCTTCCTCGTGTTTAACCTCAGGCGCCGGCTCTGAGACGTGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD950721       --> TCTTCTTCTTTCTCGTGCTTAACCTCAGGCGCCGGCTCTGAGACGTGAAC  Raphanus sativus cv Rat-Tail Radish #3870
EW738423       --> TCTTCTTC---CACGTGTTTAACCTCAGGCGCCGGCTCTGAGACGTGAAC  Raphanus sativus cv Rat-Tail Radish #3870
EW738564       --> TCTTCTTC---CACGTGTTTAACCTCAGGCGCCGGCTCTGAGACGTGAGC  Raphanus sativus cv Rat-Tail Radish #3870
EX759636       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX908159       --> TCTTCTTCTTTCTCGTGCTTAACCTCAGGCGCCGGCTCTGAGACGTGAAC  Raphanus sativus cv Rat-Tail Radish #3870
EY902810       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904709       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY911599       --> TCTTCTTCTTCCACGTGTTTAACCTCAGGCGCCGGCTCTG..........  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538726       --> TCTTCTTCTTCCTCGTGTTTAACCTCAGGCGCCGGCTC............  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539080       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD580751       --> TCTTCTTCTTTCTCGTGCTTAACCTCAGGCGCCGGCTCTGAGACGTGAAC  Raphanus sativus cv Rat-Tail Radish #3870
FD936261       --> ..................................................  Raphanus sativus var. oleiformis
FD966392       --> TCTTCTTCTTCCTCGTGTTTAACCTCAGGCGCCGGCTCTGAGACGTGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967971       --> TCTTCTTCTTCCTC....................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX908782       --> TCTTCTTCTTTCTCGTGCTTAACCTCAGGCGCCGGCTCTGAGACGTGAAC  Raphanus sativus cv Rat-Tail Radish #3870

               601    -    651
UN23144        --> CTTTTGCTCAAACTCAGACGCTATGGCGGTCTCCTCTGGTTTTGTTTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755588       <-- ..................................................
EX765865       <-- ..................................................
FD562415       <-- ..................................................
FD940360       <-- ..................................................
EV538606       <-- CTTTTGCTCAAACTCAGACGCTATGGCGGTCTCCTCTGGTTTTGTTTCAT
FD542728       <-- CTTTTGCTCAAACTCAGACGCTATGGCGGTCTCCTCTGGTTTTGTTTCAT
EW734951       <-- CTTTTGCTCAAACTCAGACGCTATGGCGGTCTCCTCTGGTTTTGTTTCAT
EV538794       <-- CTTTTGCTCAAACTCAGACGCTATGGCGGTCTCCTCTGGTTTTGTTTCAT
FD576212       <-- CTTTTGCTCAAACTCAGACGCTATGGCGGTCTCCTCTGGTTTTGTTTCAT
EX902662       <-- CTTTTGCTCAAACTCAGACGCTATGGCGGTCTCCTCTGGTTTTGTTTCAT
EX904989       <-- CTTTTGCTCAAACTCAGACGCTATGGCGGTCTCCTCTGGTTTTGTTTCAT
FD970805       <-- CTTTTGCTCAAACTCAGACGCTATGGCGGTCTCCTCTGGTTTTGTTTCAT
EY909142       <-- CTTTTGCTCAAACTCAGACGCTCTGGCGGTCTCCTCTGGTTTTGTTTCAT
FD954464       <-- CTTTTGCTCAAACTCAGACGCTATGGCGGTCTCCTCTGGTTTTGTTTCAT
FD970151       <-- CTTTTGCTCAAACTCAGACGCTATGGCGGTC---TCTGGTTTTGTTTCAC
FD543194       <-- CTTTTGCTCAAACTCAGACGCTATGGCGGTCTCCTCTGGTTTTGTTTCAT
EY906709       <-- CTTTTGCTCAAACTCAGACGCTATGGCGGTCTCCTCTGGTTTTGTTTCAT
EY915829       <-- CTTTTGCTCAAACTCAGACGCTATGGCGGTCTCCTCTGGTTTTGTTTCAT
FD969900       <-- CTTTTGCTCAAACTCAGACGCTATGGCGGTCTCCTCTGGTTTTGTTTCAT
FD971581       <-- CTTTTGCTCAAACTCAGACGCTATGGCGGTCTCCTCTGGTTTTGTTTCAT
EV542727       --> CTTTTGCTCAAACTCAGACGCTATGGCGGTCTCCTCTGGTTTTGTTTCAT
FD950721       --> CTTTTGCTCAAACTCAGACGCTATGGCGGTCTCCTCTGGTTTTGTTTCAT
EW738423       --> CTTTTGCTCAAACTCAGACGCTATGGCGGTCTCCTCTGGTTTTGTTTCAT
EW738564       --> CTTTTGCTCAAACTCAGACGCTATGGCGGTCTCCTCTGGTTTTGTTTCAT
EX759636       --> ..................................................
EX908159       --> CTTTTGCTCAAACTCAGACGCTATGGCGGTCTCCTCTGGTTTTGTTTCAT
EY902810       --> ..................................................
EY904709       --> ..................................................
EY911599       --> ..................................................
FD538726       --> ..................................................
FD539080       --> ..................................................
FD580751       --> CTTTTGCTCAAACTCAGACGCTATGGCGGTCTCCTCTGGTTTTGT.....
FD936261       --> ..................................................
FD966392       --> CTTTTGCTCAAACTCAGACGCTATGGCGGTCTCCTCTGGTTTTGTTTCAT
FD967971       --> ..................................................
EX908782       --> CTTTTGCTCAAACTCAGACGCTATGGCGGTCTCCTCTGGTTTTGTTTCAT

               651    -    701
UN23144        --> CTTTCTTCTTCCCCAAGAAATCGAACAGTCCACGATCTGTGACCTCTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755588       <-- ..................................................
EX765865       <-- ..................................................
FD562415       <-- ..................................................
FD940360       <-- ..................................................
EV538606       <-- CTTTCTTCTTCCCCAAGAAATCGAACAGTCCACGATCTGTGACCTCTGTG
FD542728       <-- CTTTCTTCTTCCCCAAGAAATCGAACAGTCCACGATCTGTAACCTCTGTG
EW734951       <-- CTTTCTTCTTCCCCAAGAAATCGAACAGTCCACGATCTGTAACCTCTGTG
EV538794       <-- CTTTCTTCTTCCCCAAGAAATCGAACAGTCCACGATCTGTGACCTCTGTG
FD576212       <-- CTTTCTTCTTCCCCAAGAAATCGAACAGTCCACGATCTGTGACCTCTGTG
EX902662       <-- CTTTCTTCTTCCCCAAGAAATCGAACAGTCCACGATCTGTAACCTCTGTG
EX904989       <-- CTTTCTTCTTCCCCAAGAAATCGAACAGTCCACGATCTGTGACATCTGTG
FD970805       <-- CTTTCTTCTTCCCCAAGAAATCGAACAGTCCACGATCTGTGACCTCTGTG
EY909142       <-- CTTTCTTCTTCCCCAAGAAATCGAACAGTCCACGATCTGTGACCTCTGTG
FD954464       <-- CTTTCTCCTTCCCCAAGAAATCGAACAGTCCACGATCTGTGACCTCTGTG
FD970151       <-- CTTTCTTCTTCCCCAAGAAATCGAACAGTCCACGATCTGTGACCTCTGTG
FD543194       <-- CTTTCTTCTTCCCCAAGAAATCGAACAGTCCACGATCTGTGACCTCTGTG
EY906709       <-- CTTTCTTCTTCCCCAAGAAATCGAACAGTCCACGATCTGTAACCTCTGTG
EY915829       <-- CTTTCTTCTTCCCCAAGAAATCGAACAGTCCACGATCTGTAACCTCTGTG
FD969900       <-- CTTTCTTCTTCCCCAAGAAATCGAACAGTCCACGATCTGTGACCTCTGTG
FD971581       <-- CTTTCTTCTTCCCCAAGAAATCGAACAGTCCACGATCTGTGACCTCTGTG
EV542727       --> CTTTCTTCTTCCCCAAGAAATCGAACAGTCCACGATCTGTGACCTCTGTG
FD950721       --> CTTTCTCCTTCCCCAAGAAATCGAACAGTCCACGATCTGTGACCTCTGTG
EW738423       --> CTTTCTTCTTCCCCAAGAAATCGAACAGTCCACGATCTGTAACCTCTGTG
EW738564       --> CTTTCTTCTTCCCCAAGAAATCGAACAGTCCACGATCTGTAACCTCTGTG
EX759636       --> ..................................................
EX908159       --> CTTTCTTCTTCCCCAAGAAATCGAACAGTCCACGATCTGTAACCTCTGTG
EY902810       --> ..................................................
EY904709       --> ..................................................
EY911599       --> ..................................................
FD538726       --> ..................................................
FD539080       --> ..................................................
FD580751       --> ..................................................
FD936261       --> ..................................................
FD966392       --> CTTTCTTCTTCCCCAAGAAATCGAACAGTCCACGATCTGTGACCTCTGTG
FD967971       --> ..................................................
EX908782       --> CTTTCTTCTTCCCCAAGAAATCGAACAGTCCACGATCTGTGACATCTGTG

               701    -    751
UN23144        --> GCCGCTGCTGATGATTCCTCCGACTCTACCTTTGGCACCTCAACGTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755588       <-- ..................................................
EX765865       <-- ..................................................
FD562415       <-- ..................................................
FD940360       <-- ..................................................
EV538606       <-- GCCGCTGCTGATGATTCCTCCGACTCTACCTTTGGCACCTCAACGTTCTT
FD542728       <-- GCCGCTGCTGATGATTCCTCCGACTCTACCTTTGGCACCTCAACGTTCTT
EW734951       <-- GCCGCTGCTGATGATTCCTCCGACGCTACCTTTGGCACCTCAACGTTCTT
EV538794       <-- GCCGCTGCTGATGATTCCTCCGACTCTACCTTTGGCACCTCAACGTTCTT
FD576212       <-- GCCGCTGCTGATGATTCCTCCGACGCTACCTTTGGCACCTCAACGTTCTT
EX902662       <-- GCCCCTGCTGATGATTCCTCCGACGCCACCTTTGGCACCTCAACGTTCTT
EX904989       <-- GCCGCTGCTGATGATTCCTCCGACGCTACCTTTGGCACCTCAACGTTCTT
FD970805       <-- GCCGCCGCTGATGATTCCTCCGACTCTACCTTTGGCACCTCAACGTTCTT
EY909142       <-- GCCGCTGCTGATGATTCCTCCGACTCTACCTTTGGCACCTCAACGTTCTT
FD954464       <-- GCCGCTGCTGATGATTCCTCCGACGCTACCTTTGGCACCTCAACGTTCTT
FD970151       <-- GCCGCTGCTGATGATTCCTCCGACTCTACCTTTGGCACCTCAACGTTCTT
FD543194       <-- GCCGCTGCTGATGATTCCTCCGACTCTACCTTTGGCACCTCAACGTTCTT
EY906709       <-- GCCGCTGCTGATGATTCCTCCGACTCTACCTTTGGCACCTCAACGTTCTT
EY915829       <-- GCCGCTGCTGATGATTCCTCCGACGCTACCTTTGGCACCTCAACGTTCTT
FD969900       <-- GCCGCTGCTGATGATTCCTCCGACTCTACCTTTGGCACCTCAACGTTCTT
FD971581       <-- GCCGCTGCTGATGATTCCTCCGACTCTACCTTTGGCACCTCAACGTTCTT
EV542727       --> GCCGCTGCTGATGATTCCTCCGACTCTACCTTTGGCACCTCAACGTTCTT
FD950721       --> GCCGCTGCTGATGATTCCTCCGACGCTACCTTTGGCACCTCAACGTTCTT
EW738423       --> GCCGCTGCTGATGATTCCTCCGACGCTACCTTTGGCACCTCAACGTTCTT
EW738564       --> GCCGCTGCTGATGATTCCTCCGACGCTACCTTTGGCACCTCAACGTTCTT
EX759636       --> ..................................................
EX908159       --> GCCCCTGCTGATGATTCCTCCGACGCCACCTTTGGCACCTCAACGTT...
EY902810       --> ..................................................
EY904709       --> ..................................................
EY911599       --> ..................................................
FD538726       --> ..................................................
FD539080       --> ..................................................
FD580751       --> ..................................................
FD936261       --> ..................................................
FD966392       --> GCCGCTGCTGATGATTCCTCCGACTCTACCTTTGGCACCTCAACGTTCTT
FD967971       --> ..................................................
EX908782       --> GCCGCTGCTGATGATTCCTCCGACGCTACCTTTGGCACCTCAACGTTCTT

               751    -    801
UN23144        --> GGTTTCCTCTGCCATAGTTATCGAGAAAAAAGTTTT-G-TTTGCTCTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755588       <-- ..................................................
EX765865       <-- ..................................................
FD562415       <-- ..................................................
FD940360       <-- ..................................................
EV538606       <-- GGTTTCCTCTGCCATAGTTATCGAGAAAAAAGTTTT-G-TTTGCTCTGCT
FD542728       <-- GGTTTCCTCTGCCATAGTTATCGAGAAAAAAGTTTT-G-TTTGCTCTGCT
EW734951       <-- GGTTTCCTCTGCCATGGTTATCGAG.........................
EV538794       <-- GGTTTCCTCTGCCATAGTTATCGAGAAAAAAGTTTT-G-TTTGCTCTGCT
FD576212       <-- GGTTTCCTCTGCCATAATTATCGAGAAA--AGTTTTGG-TTTGCTCTGCT
EX902662       <-- GGTTTCCTCTGCCATAGTTATCG--AAAAAAGTTTT-C-TTTGCTCTGCT
EX904989       <-- GGTTTCCTCTACCATAATTATCGAGAAA--AGTTTTGG-TTTGCTCTGCT
FD970805       <-- GGTTTCCTCTGCCATAGTTATCGAGAAAAAAGTATT-G-TTTGCTCTGCT
EY909142       <-- GGTTTCCTCTGCCATAGTTATCAAGAAAAAAGTTTT-G-TTTGCTCTGCT
FD954464       <-- GGTTTCCTCTGCCATAATTATCGAGAAA--AGTTTT-GATTTGCTCTGCT
FD970151       <-- GGTTTCCTCTGCCATAGTTATCGAGAAAAAAGTTTT-G-TTTGCTCTGCT
FD543194       <-- GGTTTCCTCTGCCATAGTTATCGAGAAAAAAGTTTT-G-TTTGCTCTGCT
EY906709       <-- GGTTTCCTCTGCCATAGTTATCGAGAAAAAAGTTTT-G-TTTGCTCTGCT
EY915829       <-- GGTTTCCTCTGCCATGGTTATCGAGAAAAAAGTTTT-G-TTTGCTCTGCT
FD969900       <-- GGTTTCCTCTGCCATAGTTATCGAGAAAAAAGTTTT-G-TTTGCTCTGCT
FD971581       <-- GGTTTCCTCTGCCATAGTTATCGAGAAAAAAGTTTT-G-TTTGCTCTGCT
EV542727       --> GGTTTCCTCTGCCATAGTTATCGAGAAAAAAGTTTT-G-TTTGCTCTGCT
FD950721       --> GGTTTCCTCTGCCATAATTATCGAGAAAAgtt..................
EW738423       --> GGTTTCCTCT........................................
EW738564       --> GGTTTCCTCTGCCATGGTTATCGAG.........................
EX759636       --> ..................................................
EX908159       --> ..................................................
EY902810       --> ..................................................
EY904709       --> ..................................................
EY911599       --> ..................................................
FD538726       --> ..................................................
FD539080       --> ..................................................
FD580751       --> ..................................................
FD936261       --> ..................................................
FD966392       --> GGTTTCCTCTGC......................................
FD967971       --> ..................................................
EX908782       --> GGTTTCCTCTacc.....................................

               801    -    851
UN23144        --> GATGAGAATACGAAACGATCAAA-GTATACTTAAGATGATTT-GTAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755588       <-- ..................................................
EX765865       <-- ..................................................
FD562415       <-- ..................................................
FD940360       <-- ..................................................
EV538606       <-- GATGAGAATACGAAACGATCAAA-GTATACTTAAGATGATTT-GTAAGAG
FD542728       <-- GATGAGAATACGAAACGATCAAA-GTATACTTccc...............
EW734951       <-- ..................................................
EV538794       <-- GATGAGAATACGAAACGATCAAA-GTATACTTAAGATGATTT-GTAAGAG
FD576212       <-- GATGAGAATACGAAACGATCAAAAGTATACTTAAGATGATTT-GTAAGAG
EX902662       <-- GATGAGAATACGAAACGATCAAATGTATACTTGAGATGATTT-GTAAGAG
EX904989       <-- GATGAGAATACGAAACGATCAAAAGTATACTTAAGATGATTT-GTAAGAG
FD970805       <-- GATGAGAATACGAAACGATCAAA-GTATACTTAAGATGATTT-GTAAGAG
EY909142       <-- GATGAGAATACGAAACGATCAAA-GTATACTTAAGATGATTT-GTAAGAG
FD954464       <-- GATGAGAATACGAAACGATCAAAAGTATACTTAAGATGATTT-GTAAGAG
FD970151       <-- GATGAGAATACGAAACGATCAAA-GTATACTTAAGATGATTT-GTAAGAG
FD543194       <-- GATGAGAATACGAAACGATCAAA-GTATACTTAAGATGATTT-GTAAGAG
EY906709       <-- GATGAGAATACGAAACGATCAAA-GTATACTTAAGATGATTT-GTAAGAG
EY915829       <-- GATGAGAATACGAAACGATCAAT-ATATAGTTGAGATGATTTTGTAAGAG
FD969900       <-- GATGAGAATACGAAACGATCAAA-GTATACTTAAGATGATTT-GTAAGAG
FD971581       <-- GATGAGAATACGAAACGATCAAA-GTATACTTAAGATGATTT-GTAAGAG
EV542727       --> GATGAGAATACGAAACGATCAAA-GTATACTTAAGATGATTT-GTAAGAG
FD950721       --> ..................................................
EW738423       --> ..................................................
EW738564       --> ..................................................
EX759636       --> ..................................................
EX908159       --> ..................................................
EY902810       --> ..................................................
EY904709       --> ..................................................
EY911599       --> ..................................................
FD538726       --> ..................................................
FD539080       --> ..................................................
FD580751       --> ..................................................
FD936261       --> ..................................................
FD966392       --> ..................................................
FD967971       --> ..................................................
EX908782       --> ..................................................

               851    -    901
UN23144        --> ACGAATGATCC
                   ~~~~~~~~~~~
EX755588       <-- ...........
EX765865       <-- ...........
FD562415       <-- ...........
FD940360       <-- ...........
EV538606       <-- ACGAATcc...
FD542728       <-- ...........
EW734951       <-- ...........
EV538794       <-- ACcc.......
FD576212       <-- ACGAATcc...
EX902662       <-- ACGAAaaa...
EX904989       <-- ATGAATGATCC
FD970805       <-- ACGAATGATCC
EY909142       <-- ACGAATc....
FD954464       <-- ATGAATcc...
FD970151       <-- ACGAATGATCC
FD543194       <-- ACGAATGATCC
EY906709       <-- ACGAATGATCC
EY915829       <-- Aatcc......
FD969900       <-- ACcc.......
FD971581       <-- ACGAATcc...
EV542727       --> ACc........
FD950721       --> ...........
EW738423       --> ...........
EW738564       --> ...........
EX759636       --> ...........
EX908159       --> ...........
EY902810       --> ...........
EY904709       --> ...........
EY911599       --> ...........
FD538726       --> ...........
FD539080       --> ...........
FD580751       --> ...........
FD936261       --> ...........
FD966392       --> ...........
FD967971       --> ...........
EX908782       --> ...........