Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN23173

               1      -     51
UN23173        --> GGGTAAACAAACAAGAAGGAAGGAATCCGAGGAACACCCTAAAATAAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX909083       <-- ..................................................
EV571304       <-- ..................................................
EY944735       <-- ..................................................
EY918785       <-- ..................................................
EV566095       --> GGGTAAACAAACAAGAAGGAAGGAATCCGAGGAACACCCTAAGATAAAAG
EV549039       --> ..............ggAGGAAGGAATCCGAGGAACACCCTAAAATAAAAG
EX897304       --> .............gggAGGAAGGAATCCGAGGAACACCCTAAATTAAAAG
EY900356       --> ..............ggAGGAAGGAATCCGAGGAACACCCTAAAATAAAAG
FD561274       --> ..............ggAGGAAGGAATCCGAGGAACACCCTAAAATAAAAG
EY922911       --> .................GGAAGGAATCCGAGGAACACCCTAAATTAAAAG
FD561419       --> ................gGGAAGGAATCCGAGGAACACCCTAAAATAAAAG
FD580605       --> ..............gggGGAAGGAATCCGAGGAACACCCTAAAATAAAAG
EX905368       --> ....................AGGAATCCGAGGAACACCCTAAAATAAAAG
EY899986       --> ..................................................
EX754501       --> ..................................................
EY949173       --> ..................................................
EW723751       --> ..................................................

               51     -    101
UN23173        --> AAAGGTTAAAAACCCAAG--AGAGACGAAGCAAATCGAAAGAAAAAACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX909083       <-- ..................................................
EV571304       <-- ..................................................
EY944735       <-- ..................................................
EY918785       <-- ..................................................
EV566095       --> AAAGGTTAAAAACCCAAG--AGAGACGAAGCAAATCGAAAGAAAAAACGA
EV549039       --> AAAGGTTAAAAACCCAAG--AGAGACGAAGCAAATCGAAAGAAAAAACGA
EX897304       --> AAAGGTCAAAAACCCAAGCAAGAGACGAAGCAAATCGAAAGAAAAACCGA
EY900356       --> AAAGGTTAAAAACCCAAG--AGAGACGAAGCAAATCGAAAGAAAAAACGA
FD561274       --> AAAGGTTAAAAACCCAAG--AGAGACGAAGCAAATCGAAAGAAAAAACGA
EY922911       --> AAAGGTCAAAAACCCAAGCAAGAGACGAAGCAAATCGAAAGAAAAACCGA
FD561419       --> AAAGGTTAAAAACCCAAG--AGAGACGAAGCAAATCGAAAGAAAAAACGA
FD580605       --> AAAGGTTAAAAACCCAAG--AGAGACGAAGCAAATCGAAAGAAAAAACGA
EX905368       --> AAAGGTCAAAAACCCAAGCAAGAGACGAAGCAAATCGAAAGAAAAAGCGA
EY899986       --> ....................gGAGACGAAGCAAATCGAAAGAAAAAACGA
EX754501       --> ........................ggGAAGCAAATCGAAAGAAAAAACGA
EY949173       --> .......................aggGAAGCAAATCGAAAGAAAAAACGA
EW723751       --> ..............................................ggGA

               101    -    151
UN23173        --> GAGAGGTTTTCAGCTAAATCAAATTCCTAGCGAAGTTTCTCGTGATAAG-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX909083       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV571304       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY944735       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY918785       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV566095       --> GAGAGGTTTTCAGCTAAATCAAATTCCTAGCGAAGTTTCTCGTGATAAG-  Raphanus raphanistrum subsp. landra
EV549039       --> AAGAGGTTTTCAGCTAAATCAAATTCCTAGCGAAGTTTCTCGTGATAAG-  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897304       --> GAGAGGTTATCAGCTAAATCAA-TTCCTAGCGAACTTTCTCGTGATAAG-  Raphanus sativus cv Early Scarlet Globe
EY900356       --> GAGAGGTTTTCAGCTAAATCAAATTCCTAGCGAAGTTTCTCGTGATAAG-  Raphanus raphanistrum subsp. maritimus
FD561274       --> GAGAGGTTTTCAGCTAAATCAAATTCCTAGCGAAGTTTCTCGTGATAGG-  Raphanus sativus var. oleiformis
EY922911       --> GAGAGGTTATCAGCTAAATCAA-TTCCTAGCGAACTTTCTCGTGATAAGT  Raphanus raphanistrum subsp. landra
FD561419       --> GAGAGGTTTTCAGCTAAATCAAATTCCTAGCGAAGTTTCTCGTGATAAG-  Raphanus sativus var. oleiformis
FD580605       --> GAGAGGTTTTCAGCTAAATCAAATTCCTAGCGAAGTTTCTCGTGATAAG-  Raphanus sativus cv Rat-Tail Radish #3870
EX905368       --> GAGAGGTTATCAGCTAAATCAA-TTCCTAGCCAACTTTCTCGTGATAAGT  Raphanus sativus cv Rat-Tail Radish #3870
EY899986       --> GAGAGGTTTTCAGCTAAATCAAATTCCTAGCGAAGTTTCTCGTGATAAG-  Raphanus raphanistrum subsp. maritimus
EX754501       --> GAGAGGTTATCAGCTAAATCAATTCCCTAGCGAACTTTCTCGTGATAAG-  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949173       --> GAGAGGTTTTCAGCTAAATCAAATTCCTAGCGAAGTTTCTCGTGATAAG-  Raphanus sativus cv Rat-Tail Radish #3870
EW723751       --> GAGAGGTTATCAGCTAAATCAA-TTCCTAGCGAAGTTTCTCGTGATAAGT  Raphanus sativus cv Early Scarlet Globe

               151    -    201
UN23173        --> AAGAAAGAGAGTCGGTGGTGATATGAGTTCAAGTGAAGCTTTCCCCGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX909083       <-- ..................................................
EV571304       <-- ..................................................
EY944735       <-- ..................................................
EY918785       <-- ..................................................
EV566095       --> AAGAAAGAGAGTCGGTGGTGATATGAGTTCAAGTGAAGCTTTCTCCGTGA
EV549039       --> AAGAAAGAGAGTCGGTGGTGATATGAGTTCAAGTGAAGCTTTCCCCGTGA
EX897304       --> AAGAAAGAGAGTCGGTGGTGATATGAGTTCAAGTGAAGCT--CCCCGTGA
EY900356       --> AAGAAAGAGAGTCGGTGGTGATATGAGTTCAAGTGAAGCTTTCCCCGTGA
FD561274       --> AAGAAAGAGAGTCGGTGGTGATATGAGTTCAAGTGAAGCTTTCCCCGTGA
EY922911       --> TAGAAAGAGAGTCGGTGGTGATATGAGTTCAAGTGAAGCTTTTCCCGTGA
FD561419       --> AAGAAAGAGAGTCGGTGGTGATATGAGTTCAAGTGAAGCTTTCCCCGTGA
FD580605       --> AAGAAAGAGAGTCGGTGGCGATATGAGTTCAAGTGAAGCTTTTCCCGTGA
EX905368       --> TAGAAAGAGAGTCGGTGGTGATATGAGTTCAAGTGAAGCTTTTCCCGTGA
EY899986       --> AAGAAAGAGAGTCGGTGGTGATATGAGTTCAAGTGAAGCTTTCCCCGTGA
EX754501       --> AAGAAAGAGAGTCGGTGGTGATATGAGTTCAAGTGAAGCTTTTCCCGTGA
EY949173       --> AAGAAAGAGAGTCGGTGGTGATATGAGTTCAAGTGAAGCTTTTCCCGTGA
EW723751       --> TAGAAAGAGAGTCGGTGGTGATATGAGTTCAAGTGAAGCTTTTCCCGTGA

               201    -    251
UN23173        --> TGCAGGAAATCATGCTTGAGTTTCGTGCTGGTAAGATGTCTTTGCAGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX909083       <-- ..................................................
EV571304       <-- ..................................................
EY944735       <-- ..................................................
EY918785       <-- ..................................................
EV566095       --> TGCAGGAAATCATGCTTGAGTTTCGTGCTGGTAAGATGTCTTTGCAGGGA
EV549039       --> TGCAGGAAATCATGCTTGAGTTTCGTGCTGGTAAGATGTCTTTGCAGGGA
EX897304       --> TGCAGGAAATCATGCTTGAGTTTCGTGCTGGTAAGATGTCTTTGCAGGGA
EY900356       --> TGCAGGAAATCATGCTTGAGTTTCGTGCTGGTAAGATGTCTTTGCAGGGA
FD561274       --> TGCAGGAAATCATGCTTGAGTTTCGTGCTGGTAAGATGTCTTTGCAGGGA
EY922911       --> TGCAGGAAATCATGCTTGAGTTTCGTGCTGGTAAGATGTCTTTGCAGGGA
FD561419       --> TGCAGGAAATCATGCTTGAGTTTCGTGCTGGTAAGATGTCTTTGCAGGGA
FD580605       --> TGCAGGAAATCATGCTTGAGTTTCGTGCTGGTAAGATGTCTTTGCAGGGA
EX905368       --> TGCAGGAAATCATGCTTGAGTTTCGTGCTGGTAAGATGTCTTTGCAGGGA
EY899986       --> TGCAGGAAATCATGCTTGAGTTTCGTGCTGGTAAGATGTCTT-GCAGGGA
EX754501       --> TGCAGGAAATCATGCTTGAGTTTCGTGCTGGTAAGATGTCTTTGCAGGGA
EY949173       --> TGCAGGAAATCATGCTTGAGTTTCGTGCTGGTAAGATGTCTTTGCAGGGA
EW723751       --> TGCAGGAAATCATGCTTGAGTTTCGTGCTGGTAAGATGTCTTTGCAGGGA

               251    -    301
UN23173        --> ACAAGAGTTGTCCCTGATGCACGAAAAGGACTTGTCCGCATTGCTAGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX909083       <-- .......................................caTGCTAGAG-
EV571304       <-- ..................................................
EY944735       <-- ..................................................
EY918785       <-- ..................................................
EV566095       --> ACAAGAGTTGTCCCTGATGCACGAAAAGGACTTGTCCGCATTGCTAGAGG
EV549039       --> ACAAGAGTTGTCCCTGATGCACGAAAAGGACTTGTCCGCATTGCTAGAGG
EX897304       --> ACAAGAGTTGTCCCTGATGCACGAAAAGGACTTGTCCGCATTGCTAGAGG
EY900356       --> ACAAGAGTTGTCCCTGATGCACGAAAAGGACTTGTCCGCATTGCTAGAGG
FD561274       --> ACAAGAGTTGTCCCTGATGCACGAAAAGGACTTGTCCGCATTGCTAGAGG
EY922911       --> ACAAGAGTTGTCCCTGATGCACGAAAAGGACTTGTCCGCATTGCTAGAGG
FD561419       --> ACAAGAGTTGTCCCTGATGCACGAAAAGGACTTGTCCGCATTGCTAGAGG
FD580605       --> ACAAGAGTTGTCCCTGATGCACGAAAAGGACTTGTCCGCATTGCTAGAGG
EX905368       --> ACAAGAGTTGTCCCTGATGCACGAAAAGGACTTGTCCGCATTGCTAGAGG
EY899986       --> ACAAGAGTTGTCCCTGATGCACGAAAAGGACTTGTCCGCATTGCTAGAGG
EX754501       --> ACAAGAGTTGTCCCTGATGCACGAAAAGGACTTGTCCGCATTGCTAGAGG
EY949173       --> ACAAGAGTTGTCCCTGATGCACGAAAAGGACTTGTCCGCATTGCTAGAGG
EW723751       --> ACAAGAGTTGTCCCTGATGCACGAAAAGGACTTGTCCGTATTGCTAGAGG

               301    -    351
UN23173        --> TGAGGAGGGACTGGTTCATTTCCAGTGGCTTGATCGAACCCAGAATGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX909083       <-- TGAGGAGG-ACT--GTCATT-CCAGTGGCT-GATCGA-CCCAGAATGCTG
EV571304       <-- ..................................................
EY944735       <-- ..................................................
EY918785       <-- ..................................................
EV566095       --> TGAGGAGGGACTGGTTCATTTCCAGTGGCTTGATCGAACCCAGAATGCAG
EV549039       --> TGAGGAGGGACTGGTTCATTTCCAGTGGCTTGATCGAACCCAGAATGCAG
EX897304       --> TGAGGAGGGACTGGTTCATTTCCAGTGGCTTGATCGAACCCAGAATGCAG
EY900356       --> TGAGGAGGGACTGGTTCATTTCCAGTGGCTTGATCTAACCCAGAATGCAG
FD561274       --> TGAGGAGGGACTGGTTCATTTCCAGTGGCTTGATCGAACCCAGAATGCAG
EY922911       --> TGAGGAGGGACTGGTTCATTTCCAGTGGCTTGATCGAACCCAGAATGCTG
FD561419       --> TGAGGAGGGACTGGTTCATTTCCAGTGGCTTGATCGGACCCAGAATGCAG
FD580605       --> TGAGGAGGGACTGGTTCATTTCCAGTGGCTTGATCGAACCCAGAATGCAG
EX905368       --> TGAGGAGGGACTGGTTCATTTCCAGTGGCTTGATCGAACCCAGAATGCTG
EY899986       --> TGAGGAGGGACTGGTTCATTTTCAGTGGCTTGATCGAACCCAGAATGCAG
EX754501       --> TGAGGAGGGACTGGTTCATTTCCAGTGGCTTGATCGAACCCAGAATGCAG
EY949173       --> TGAGGAGGGACTGGTTCATTTCCAGTGGCTTGATCGAACCCAGAATGCAG
EW723751       --> TGAGGAGGGACTGGTTCATTTCCAGTGGCTTGATCGAACCCAGAATGCTG

               351    -    401
UN23173        --> TGGAAGATGATCAAATCGTTTTCCCTGATGAAGCTCTATTTGAAAAGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX909083       <-- TGGAAGATGATCAAATCGTT--TCCTGATGAAGCTCT-TTTGAAAAGGTT
EV571304       <-- ............................TGAAGCTCTATTTGAAAAGGTT
EY944735       <-- ................................................gt
EY918785       <-- ..................................................
EV566095       --> TGGAAGATGATCAAATCGTTTTCCCTGATGAAGCTCTATTTGAAAAGGTT
EV549039       --> TGGAAGATGATCAAATCGTTTTCCCTGATGAAGCTCTATTTGAAAAGGTT
EX897304       --> TGGAAGATGATCAAATCGTTTTCCCTGATGAAGCTCTATTTGAAAAGGTT
EY900356       --> TGGAAGATGATCAAATCGTTTTCCCTGATGAAGCTCTATTTGAAAAGGTT
FD561274       --> TGGAAGATGATCAAATCGTTTTCCCTGATGAAGCTCTATTTGAAAAGGTT
EY922911       --> TGGAAGATGATCAAATCGTTTTCCCTGATGAAGCTCTGTTTGAAAAGGTT
FD561419       --> TGGAAGATGATCAAATCGTTTTCCCTGATGAAGCTCTATTTGAAAAGGTT
FD580605       --> TGGAAGATGATCAAATCGTTTTCCCTGATGAAGCTCTATTTGAAAAGGTT
EX905368       --> TGGAAGATGATCAAATCGTTTTCCCTGATGAAGCTCTATTTGAAAAGGTT
EY899986       --> TGGAAGATGATCAAATCGTTTTCCCTGATGAAGCTCTATTTGAAAAGGTT
EX754501       --> TGGAAGATGATCAAATCGTTTTCCCTGATGAAGCTCTATTTGAAAAGGTT
EY949173       --> TGGAAGATGATCAAATCGTTTTCCCTGATGAAGCTCTATTTGAAAAGGTT
EW723751       --> TGGAAGATGATCAAATCGTTTTCCCTGATGAAGCTCTATTTGAAAAGGTT

               401    -    451
UN23173        --> AATCAATCATCAGACAGGGTGTACATTCTGAAGTTCAACAGTGATGACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX909083       <-- A-TCAATCATCAGACAGGGTGTACATTCTGAAGTTCAACAGTGATGACCG
EV571304       <-- AATCAATCATCAGACAGGGTGTACATTCTGAAGTTCAACAGTGATGACCG
EY944735       <-- tATCAATCATCAGACAGGGTGTACAT-CCGAAGTTCAACAGTGATGACCG
EY918785       <-- ..................................................
EV566095       --> AATCAATCATCAGACAGGGTGTACATTCTGAAGTTCAACAGTGATGACCG
EV549039       --> AATCAATCATCAGACAGGGTGTACATTCTGAAGTTCAACAGTGATGACCG
EX897304       --> AATCAATCATCAGACAGGGTGTACATTCTGAAGTTCAACAGTGATGACCG
EY900356       --> AATCAATCATCAGACAGGGTGTACATTCTGAAGTTCAACAGTGATGACCG
FD561274       --> AATCAATCGTCATACAGGGTGTACATTCTGAAGTTCAACAGTGATGACCG
EY922911       --> AATCAATCATCAGACAGGGTGTACATTCTGAAGTTCAACAGTGATGACCG
FD561419       --> AATCAATCATCAGACAGGGTGTACATTCTGAAGTTCAACAGTGATGACCG
FD580605       --> AATCAATCATCAGACAGGGTGTACATTCTGAAGTTCAACAGTGATGACCG
EX905368       --> AATCAATCATCAGACAGGGTGTACATTCTGAAGTTCAACAGTGATGACCG
EY899986       --> AATCAATCATCAGACAGGGTGTACATTCTGAAGTTCAACAGTGATGACCG
EX754501       --> AATCAATCATCAGACAGGGTGTACATTCTGAAGTTCAACAGTGATGACCG
EY949173       --> AATCAATCATCAGACAGGGTGTACATTCCGAAGTTCAACAGTGATGACCG
EW723751       --> AATCAATCATCAGACAGGGTGTACATTCTGAAGTTCAACAGTGATGACCG

               451    -    501
UN23173        --> CAAGCTATTCTTATGGATACAGGAGCCGAGAGCTGAAGGTGATGCAGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX909083       <-- CAAGCTATTCTTATGGATACAGGAGCCGAGAGCTGAAGGTGATGCAGATA
EV571304       <-- CAAGCTATTCTTATGGATACAGGAGCCGAGAGCTGAAGGTGATGCAGATA
EY944735       <-- CAAGCTATTCTTATGGATACAGGAGCCCAGAGCTGAAGGTGATGCAGATA
EY918785       <-- ..................................................
EV566095       --> CAAGCTATTCTTATGGATACAGGAGCCGAGAGCTGAAGGTGATGCAGATA
EV549039       --> CAAGCTATTCTTATGGATACAGGAGCCGAGAGCTGAAGGTGATGCAGATA
EX897304       --> CAAGCTATTCTTATGGATACAGGAGCCGAGAGCTGAAGGTGATGCAGATA
EY900356       --> CAAGCTATTCTTATGGATACAGGAGCCGAGAGCTGAAGGTGATGCAGATA
FD561274       --> CAAGCTATTCTTATGGATACAGGAGCCGAGAGCTGAAGGTGATGCAGATA
EY922911       --> CAAGCTTTTCTTATGGATACAGGAGCCGAGAGCTGAAGGTGATGCAGATA
FD561419       --> CAAGCTATTCTTATGGATACAGGAGCCGAGAGCTGAAGGTGATGCAGATA
FD580605       --> CAAGCTATTCTTATGGATACAGGAGCCCAGAGCTGAAGGTGATGCAGATA
EX905368       --> CAAGCTATTCTTATGGATACAGGAGCCGAGAGCTGAAGGTGATGCAGATA
EY899986       --> CAAGCTATTCTTATGGATACAGGAGCCGAGAGCTGAAGGTGATGCAGATA
EX754501       --> CAAGCTATTCTTATGGATAC--GAGCCAAGAGCTGAAGGTGATGCAGATA
EY949173       --> CAAGCTATTCTTATGGATACAGGAGCCCAGAGCTGAAGGTGATGCAGATA
EW723751       --> CAAGCTATTCTTATGGATACAGGAGCCGAGAGCTGAAGGTGATGCAGATA

               501    -    551
UN23173        --> TATGTTCTGCGGTCAATCAGTACCTTAATCAACCACTAGAGTTTGGTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX909083       <-- TATGTTCTGCGGTCAATCAGTACCTTAATCAACCACTAGAGTTTGGTGAA
EV571304       <-- TATGTTCTGCGGTCAATCAGTACCCTAATCAACCACTAGAGTTTGGTGAA
EY944735       <-- TATGTTCTGCGGTCAATCAGTACCTTAATCAACCACTAGAGTTTGGTGAA
EY918785       <-- ..................................................
EV566095       --> TATGTTCTGCGGTCAATCAGTACCCTAATCAACCACTAGAGTTTGGTGAA
EV549039       --> TATGTTCTGCGGTCAATCAGTACCTTAATCAACCACTAGAGTTTGGTGAA
EX897304       --> TATGTTCTGCGGTCAATCAGTACCTTAATCAACCACTAGAGTTTGGTGAA
EY900356       --> TATGTTCTGCGGTCAATCAGTACCTTAATCAACCACTAGAGTTTGGTGAA
FD561274       --> TATGTTCTGCGGTCAATCAGTACCTTAATCAACCACTAGAGTTTGGTGAA
EY922911       --> TATGTTCTGCGGTCAATCAGTACCTTAATCAACCACTAGAGTTTGGTGAA
FD561419       --> TATGTTCTGCGGTCAATCAGTACCTTAATCAACCACTAGAGTTTGGTGAA
FD580605       --> TATGTTCTGCGGTCAATCAGTACCTTAATCAACCACTAGAGTTTGGTGAA
EX905368       --> TATGTTCTGCGGTCAATCAGTACCTTAATCAACCACTAGAGTTTGGTGAA
EY899986       --> TATGTTCTGCGGTCAATCAGTACCTTAATCAACCACTAGAGTTTGGTGAA
EX754501       --> TATGTTCTGCGGTCAATCAGTACCTTAATCAACCACTAGAGTTTGGTGAA
EY949173       --> TATGTTCTGCGGTCAATCAGTACCTTAATCAACCACTAGAGTTTGGTGAA
EW723751       --> TATGTTCTGCGGTCAATCAGTACCTTAATCAACCACTAGAGTTTGGTGAA

               551    -    601
UN23173        --> G---------TTGCTGTGCCGGAGGATGTGGAAGACATGGCAGAAGACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX909083       <-- G---------TTGCTGTGCCGGAGGATGTGGAAGACATGGCAGAAGACGA
EV571304       <-- GGAGATGCAGTTGCTGTGCCGGAGGATGTGGAAGACATGGCAGAAGACGA
EY944735       <-- G---------TTGCTGTGCCGGAGGATGTGGAAGACATGGCAGAAGACGA
EY918785       <-- ..................................................
EV566095       --> GGAGATGCAGTTGCTGTGCCGGAGGATGTGGAAGACATGGCAGAAGACGA
EV549039       --> G---------TTGCTGTGCCGGAGGATGTGGAAGACATGGCAGAAGACGA
EX897304       --> G---------TTGCTGTGCCGGAGGATGTGGAAGACATGGCAGAAGACGA
EY900356       --> G---------TTGCTGTGCCGGAGGATGTGGAAGACATGGCAGAAGACGA
FD561274       --> G---------TTGCTGTGCCGGAGGATGTG....................
EY922911       --> G---------TTGCTGTGCCGGAGGATGTGGAAGACATGGCAGAAGACGA
FD561419       --> G---------TTGCTGTGCCGGAGGATGTGGAAGACATGGCAGAAGACGA
FD580605       --> G---------TTGCTGTGCCAGAGGATGTGGAAGACATGGCAGAAGACGA
EX905368       --> G---------TTGCTGTGCCGGAGGATGTGGAAGACATGGCAGAAGACGA
EY899986       --> G---------TTGCTGTGCCGGAGGATGTGGAAGACATGGCAGAAGACGA
EX754501       --> GGAGATGCAGTTGCTGTGCCGGAGGATGTGGAAGACATGGCAGAAGACGA
EY949173       --> G---------TTGCTGTGCCGGAGGATGTGGAAGACATGGCAGAAGACGA
EW723751       --> GGAGATGCAGTTGCTGTGCCGGAGGATGTGGAAGACATGGCAGAAGACGA

               601    -    651
UN23173        --> TGTTTCATCCAGAGCTGGAAACTTGGTTGTACCAAATGTGTCTACAGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX909083       <-- TGTTTCATCCAGAGCTGGAAACTTGGTTGTACCAAATGTGTCTACAGAGG
EV571304       <-- TGTTTCATCCAGAGCTGGAAACTTGGTTGTACCAAATGTGTCTACAGAGG
EY944735       <-- TGTTTCATCCAGAGCTGGAAACTTGGTTGTACCAAATGTGTCTACAGAGG
EY918785       <-- ..................................................
EV566095       --> TGTTTCATCCAGAGCTGGAAACTTGGTTGTACCAAATGTGTCTACAGAGG
EV549039       --> TGTTTCATCCAGAGCTGGAAACTTGGTTGTACCAAATGTGTCTACAGAGG
EX897304       --> TGTGTCATCCAG--CTGGAAACTTGGTTGTACCAAATGTGTCTACAGAGG
EY900356       --> TGTTTCATCCAGAGCCGGAAACTTGGTTGTACCAAATGTGTCTACAGAGG
FD561274       --> ..................................................
EY922911       --> TGTTTCATCCAGAGCTGGAAACTTGGTTGTACCAAATGTGTCTACAGAGG
FD561419       --> TGTTTCATCCAGAGCTGGAAACTTGGTTGTACCAAATGTGTCTACAGAGG
FD580605       --> TGTTTCATCCAGAGCTGGAAACTTGGTTGTACCAAATGTGTCTACAGAGG
EX905368       --> TGTTTCATCCAGAGCTGGAAACTTGGTTGTACCAAATGTGTCTACAGAGG
EY899986       --> TGTTTCATCCAGAGCTGGAAACTTGGTTGTACCAAATGTGTCTACAGAGG
EX754501       --> TGTTTCATCCAGAGCTGGAAACTTGGTTGTACCAAATGTGTCTACAGAGG
EY949173       --> TGTTTCATCCAGAGCTGGAAACTTGGTTGTACCAAATGTGTCTACAGAGG
EW723751       --> TGTTTCATCCAGAGCTGGAAACTTGGTTGTACCAAATGTGTCTACAGAGG

               651    -    701
UN23173        --> TGAGTGATGTGTCATCTTCGTCTGGACCAGTTAAGCTGGCAGACTTGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX909083       <-- TGAGTGATGTGTCATCTTCGTCTGGACCAGTTAAGCTGGCAGACTTGCAA
EV571304       <-- TGAGTGATGTGTCATCTTCGTCTGGACCAGTTAAGCTGGCAGACTTGCAA
EY944735       <-- TGAGTGATGTGTCATCTTCGTCTGGACCAGTTAAGTTGGCAGACTTGCAA
EY918785       <-- ......................TGGACCAGTTAAGCTGGCAGACTTGCAA
EV566095       --> TGAGTGATGTGTCATCTTCGTCTGGACCAGTTAAGCTGGCAGACTTGCAA
EV549039       --> TGAGTGATGTGTCATCTTCGTCTGGACCAGTTAAGCTGGCAGACTTGCAA
EX897304       --> TGAGTGATGTGTCATCTTCGTCTGGAC-AGTTAAGCTGGCAGACTTGCAA
EY900356       --> TGAGTGATGTGTCATCTTCGTCTGGACCAGTTAAGCTGGCAGACTTGCAA
FD561274       --> ..................................................
EY922911       --> TGAGTGATGTGTCATCTTCGTCTGGACCAGTTAAGCTGGCAGACTTGCAA
FD561419       --> TGAGTGATGTGTCATCTTCGTCTGGACCAGTTAAGCTGGCAGACTTGCAA
FD580605       --> TGAGT-ATGTGTCATCTTCGTCTGGACCAGTTAAGCTGGCAGACTTGCAA
EX905368       --> TGAGTGATGTGTCATCTTCGTCTGGACCAGTTAAGCTGGCAGACTTGCAA
EY899986       --> TGAGTGATGTGTCATCTTCGTCTGGACCAGTTAAGCTGGCAGACTTGCAA
EX754501       --> TGAGTGATGTGTCATCTTCGTCTGGACCAGTTAAGCTGGCAGACTTGCAA
EY949173       --> TGAGTGATGTGTCATCTTCGTCTGGACCAGTTAAGTTGGCAGACTTGCAA
EW723751       --> TGAGTGATGTGTCATCTTCGTCTGGACCAGTTAAGCTGGCAGACTTGCAA

               701    -    751
UN23173        --> AGAATTCTGAACAACCTCTCTTCTGGTCCTGTAG-TATCCCTGGAGATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX909083       <-- AGAATTTTGAACAACCTCTCTTCTGGTCCTGTAGGTATCCCTGGAGATGA
EV571304       <-- AGAATTCTGAACAACCTCTCTTCTGGTCCTGTAGGTATCCCTGGAGATGA
EY944735       <-- AGAATTCTGAACAACCTCTCTTCTGGTCCTGTAGGTATCCCTGGAGATGA
EY918785       <-- AGAATTTTGAACAACCTCTTTTCTGGTCCTGTAGGTATCCCTGGAGATGA
EV566095       --> AGAATTCTGAACAACCTCTCTTCTGGTCCTG...................
EV549039       --> AGAATTCTGAACAACCTCTCTTCTGGTCCTGT..................
EX897304       --> AGAttct...........................................
EY900356       --> AGAATTCTGAACAACCTCTCTTCTGGTC......................
FD561274       --> ..................................................
EY922911       --> AGAATTCTGAACAACCTCTCTTCTGGTCCTGTAG-TATCCCTGGAGATGA
FD561419       --> AGAATTCTGAACAACCTCTCTTCTGGTCCTGTAG-TATCCCTGGAGATGA
FD580605       --> AGAATTCTGAACAACCTCTCTTCTGGTCCTGTAG-TATCCCTGGAGAT..
EX905368       --> g.................................................
EY899986       --> AGAATTCTGAACAACCTCTCTTCTGGTCCTGTAGGTATCCCTGGAGATGA
EX754501       --> AGAATTCTGA-CAACCTCTCTTCTGGTCCTGTAG-TATCCCTGGAGATGA
EY949173       --> AGAATTCTGAACAACCTCTCTTCTGGTCCTGTAG-TATCCCTGGAGATGA
EW723751       --> AGAATTCTGAACAACCTCTCTTCTGGTCCTGTAGGTATCCCTGGAGATGA

               751    -    801
UN23173        --> A-GAGGAAG-CCTAGTATTAGGGGATATCCTGAAGCCTGAGTTGATTATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX909083       <-- A-GAGGAAGGCCTAGTATTAGGGGATATCCTGAAGCCTGAGTTGATTATG
EV571304       <-- A-GAGGAAGGCCTAGTATTAGGGGATATCCTGAAGCCTGAGTTGATTATG
EY944735       <-- A-GAGGAAGGCCTAGTATTAGGGGATATCCTGAAGCCTGAGTTGATTATG
EY918785       <-- A-GAGGAAGGCCTAGTATTAGGGGATATCCTGAAGCCTGAGTTGATTATG
EV566095       --> ..................................................
EV549039       --> ..................................................
EX897304       --> ..................................................
EY900356       --> ..................................................
FD561274       --> ..................................................
EY922911       --> ..................................................
FD561419       --> --GA-GAAG-CCTAGTATTAGGG-ATATCCTGAAGCCTGAGTTGAT-ATG
FD580605       --> ..................................................
EX905368       --> ..................................................
EY899986       --> A-GAGGAAG-CCTAGTATTAGGGGATATCCTGAAGCCTGAGTTGATTAT.
EX754501       --> ..................................................
EY949173       --> A-GAGGAAG-CCTAGTATTAGGG-ATATCCTGAAGCCTGAGTTGATTATG
EW723751       --> AAGAGGAAGGCCTAGTATTAGGGGATATCCTGAAGCCTGAGTTGATTATG

               801    -    851
UN23173        --> CCATTGCTTGAGATGTTACCGGTACAAGAACGATTGTCTTCCCATTTACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX909083       <-- CCATTGCTTGAGATGTTACCGGTACAAGAACGATTGTCTTCCCATTTACC
EV571304       <-- CCATTGCTTGAAATGTT-CCGGTACAAGAACGATTGTCTTCCCATTTACC
EY944735       <-- CCATTGCTTGAGATGTTACCGGTACAAGAACGATTGTCTTCCCATTTACC
EY918785       <-- CCATTGCTTGAGATGTTACCGGTACAAGAACGATTGTCTTCCCATTTACC
EV566095       --> ..................................................
EV549039       --> ..................................................
EX897304       --> ..................................................
EY900356       --> ..................................................
FD561274       --> ..................................................
EY922911       --> ..................................................
FD561419       --> -CATTGCTTGAGATGT..................................
FD580605       --> ..................................................
EX905368       --> ..................................................
EY899986       --> ..................................................
EX754501       --> ..................................................
EY949173       --> CCATTGCTTGAGATGTTACCGGTACA-GAACGATTGTCTTCCCATTTACC
EW723751       --> CCATTGCTTGAGATGTTACCGGTACAAGAACGATTGTCTTCCCATTTACC

               851    -    901
UN23173        --> TGAGGGTCACTATAGGGATGAAGATATACTGGAGTTGTTACAGAGCCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX909083       <-- TGAGGGTCACTGTAGGGATGAAGATATACTGGAGTTGTTACAGAGCCCTC
EV571304       <-- TGAGGGTCACTATAGGGATGAATATATACTGGAGTTGTTACAGAGCCCTC
EY944735       <-- TGAGGGTCACTATAGGGATGAAGATATACTGGAGTTGTTACAGAGCCCTC
EY918785       <-- TGAGGGTCACTATAGGGATGAAGATATACTGGAGTTGTTACAGAGCCCTC
EV566095       --> ..................................................
EV549039       --> ..................................................
EX897304       --> ..................................................
EY900356       --> ..................................................
FD561274       --> ..................................................
EY922911       --> ..................................................
FD561419       --> ..................................................
FD580605       --> ..................................................
EX905368       --> ..................................................
EY899986       --> ..................................................
EX754501       --> ..................................................
EY949173       --> TGAGGtca..........................................
EW723751       --> TGAGGGTCACTGTAGGGATGAAGATATACTGGAGTTGTTATAGAGCCCTC

               901    -    951
UN23173        --> CTTTTCGTCAGCAAGTAGATGCATTTACCTATGTACTTCGCACAGGACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX909083       <-- CTTTTCGTCAGCAAGTAGATGCATTTACCTACGTACTTCGCACAGGACAG
EV571304       <-- CTTTTCGTCAGCAAGTAGATGCATTTACCTATGTACTTCGCACAGGACAG
EY944735       <-- CTTTTCGTCAGCAAGTAGATGCATTTACCTATGTACTTCGCACAGGACAG
EY918785       <-- CTTTTCGTCAGCAAGTAGATGCATTTACCTATGTACTTCGCACAGGACAG
EV566095       --> ..................................................
EV549039       --> ..................................................
EX897304       --> ..................................................
EY900356       --> ..................................................
FD561274       --> ..................................................
EY922911       --> ..................................................
FD561419       --> ..................................................
FD580605       --> ..................................................
EX905368       --> ..................................................
EY899986       --> ..................................................
EX754501       --> ..................................................
EY949173       --> ..................................................
EW723751       --> CTTT-CGTCAGCAAGTAGATGCATTTACCTACGTACTTCGCACAG-ACAG

               951    -   1001
UN23173        --> ATAGATTTGACTCAGTTCGGTATTGACCCAAGTAAATATAAGTTCACAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX909083       <-- ATAGATTTGACTCAGTTCGGTATCGACCCAAGTAAATATAAGTTCACAGT
EV571304       <-- ATAGATTTGACTCAGTTCGGTATTGACCCAAGTAAATATAAGTTCACAGT
EY944735       <-- ATAGATTTGACTCAGTTCGGTATTGACCCAAGTAAATATAAGTTTACAGT
EY918785       <-- ATAGATTTGACTCAGTTCGGTATTGACCCAAGTAAATATAAGTTCACAGT
EV566095       --> ..................................................
EV549039       --> ..................................................
EX897304       --> ..................................................
EY900356       --> ..................................................
FD561274       --> ..................................................
EY922911       --> ..................................................
FD561419       --> ..................................................
FD580605       --> ..................................................
EX905368       --> ..................................................
EY899986       --> ..................................................
EX754501       --> ..................................................
EY949173       --> ..................................................
EW723751       --> ATAGATTT..........................................

               1001   -   1051
UN23173        --> TGTCTCATTCCTTGAGGCACTTGAGGACTCGGTTGCAACGCAATCAAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX909083       <-- TGTCTCATTCCTTGAGGCACTTGAGGACTCGGTTGCAACGCAATCAAACG
EV571304       <-- TGTCTCATTCCTTGAGGCACTTGAGGACTCGGTTGCAACGCAATCAAACG
EY944735       <-- TGTCTCATTCCTTGAGGCACTTGAGGACTCGGTTGCAACGCAATCAAACG
EY918785       <-- TGTCTCATTCCTTGAGGCACTTGAGGACTCGGTTGCAACGCAATCAAACG
EV566095       --> ..................................................
EV549039       --> ..................................................
EX897304       --> ..................................................
EY900356       --> ..................................................
FD561274       --> ..................................................
EY922911       --> ..................................................
FD561419       --> ..................................................
FD580605       --> ..................................................
EX905368       --> ..................................................
EY899986       --> ..................................................
EX754501       --> ..................................................
EY949173       --> ..................................................
EW723751       --> ..................................................

               1051   -   1101
UN23173        --> ACGCAATGGATGAGAGTTGATCTTTTCATAATGATTTTGTTTGAAGTTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX909083       <-- ACGCAATGGATGAGAGTTGATCTTTTCATAATGATTTTGTTTGAAGTTCG
EV571304       <-- ACGCAATGGATGAGAGTTGATCTTTTCATAATGATTTTGTTTGAAGTTCG
EY944735       <-- ACGCAATGGATGAGAGTTGATCTTTTCATAATGATTTTGTTTGAAGTTCG
EY918785       <-- ACGCAATGGATGAGAGTTGATCTTTTCATAATGATTTTGTTTGAAGTTCG
EV566095       --> ..................................................
EV549039       --> ..................................................
EX897304       --> ..................................................
EY900356       --> ..................................................
FD561274       --> ..................................................
EY922911       --> ..................................................
FD561419       --> ..................................................
FD580605       --> ..................................................
EX905368       --> ..................................................
EY899986       --> ..................................................
EX754501       --> ..................................................
EY949173       --> ..................................................
EW723751       --> ..................................................

               1101   -   1151
UN23173        --> ACCTTTCAACTAAGAAAATCATTTTCGTTGTTCGATGAATTTGGATTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX909083       <-- ACCTTTCAACTAAGAAAATCATTTCCGTTGTTCGATGAATTTGGGTTTAT
EV571304       <-- ACCTTTCAACTAAGAAAATCATTTTCGTTGTTCGATGAATTTGGATTTAT
EY944735       <-- ACCTGTCAACTAAGAAAATCATTTTCGTTGTTCGATGAATTTGGATTTAT
EY918785       <-- ACCTGTCAACTAAGAAAATCATTTTCGTTGTTCGATGAATTTGGATTTAT
EV566095       --> ..................................................
EV549039       --> ..................................................
EX897304       --> ..................................................
EY900356       --> ..................................................
FD561274       --> ..................................................
EY922911       --> ..................................................
FD561419       --> ..................................................
FD580605       --> ..................................................
EX905368       --> ..................................................
EY899986       --> ..................................................
EX754501       --> ..................................................
EY949173       --> ..................................................
EW723751       --> ..................................................

               1151   -   1201
UN23173        --> GAATTTTGTTGAAGTTTATGTGTTGGGATTTTATTTTGTCGAACACAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX909083       <-- GAATTTTGTTGAAGTTTATGTGTTGGGATTTTATTTTGTCGAACACAGGT
EV571304       <-- GAATTTTGTTGAAGTTTATGTGTTGGGATTTTATTTTGTCGAACACAGGT
EY944735       <-- GAATTTTGTTGAAGTTTATGTGTTGGGATTTTATTTTGTCAAACACAGGT
EY918785       <-- GAATTTTGTTGAAGTTTATGTGTTGGGATTTTATTTTGTCAAACACAGGT
EV566095       --> ..................................................
EV549039       --> ..................................................
EX897304       --> ..................................................
EY900356       --> ..................................................
FD561274       --> ..................................................
EY922911       --> ..................................................
FD561419       --> ..................................................
FD580605       --> ..................................................
EX905368       --> ..................................................
EY899986       --> ..................................................
EX754501       --> ..................................................
EY949173       --> ..................................................
EW723751       --> ..................................................

               1201   -   1251
UN23173        --> TTTCAAGCATTGTTATCAGCTTTTAGTTTATTATTCCATATAACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX909083       <-- TTTC..........................................
EV571304       <-- TTTCAAGCATTGTTATCAGCTTTTAGTTTATTATTCCATATAACAG
EY944735       <-- TTTCAAGC......................................
EY918785       <-- TTTCAAGCATTGTTATCAGCTTTTAGTTag................
EV566095       --> ..............................................
EV549039       --> ..............................................
EX897304       --> ..............................................
EY900356       --> ..............................................
FD561274       --> ..............................................
EY922911       --> ..............................................
FD561419       --> ..............................................
FD580605       --> ..............................................
EX905368       --> ..............................................
EY899986       --> ..............................................
EX754501       --> ..............................................
EY949173       --> ..............................................
EW723751       --> ..............................................