RadishBase

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Alignment for radish unigene UN23187

               1      -     51
UN23187        --> CAAGGATGATAAGTTTTCTTCAAATCCAAACTCTTAACGTTTTGTAGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX747935       <-- ..................................................
EW734289       <-- ..................................................
FD541194       <-- ..................................................
EY933314       <-- ..................................................
FD938118       <-- ..................................................
EV549817       <-- ..................................................
EY938339       <-- ..................................................
FD537534       --> CAAGGATGATAAGTTTTCTTCAAATCCAAACTCTTAACGTTTTGTAGTAA
EX752008       --> ....................CAAAACCAAACTCTTAACGTTTTGTAGTAA
EY928820       --> ...................................AACGTTTTGTAGTAA
FD934578       --> ...................................AACGTTTTGTAGTAA
FD945044       --> .......................................aacgttttgta
EV545211       --> ..................................................
FD547736       --> ..................................................

               51     -    101
UN23187        --> CAAGCAGTGATAGTGTTTAGCGGTTGTATTGCCACAACCAGATGAAACGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX747935       <-- ..................................................
EW734289       <-- ..................................................
FD541194       <-- ..................................................
EY933314       <-- ..................................................
FD938118       <-- ..................................................
EV549817       <-- ..................................................
EY938339       <-- ..................................................
FD537534       --> CAAGCAGTGAAAGTGTTT-GCGGTTGTTTTGCCACAACCAGATGAAACGC
EX752008       --> CAAGCAGTGATAGTGTTTAGCGGTTGTTTTGCTACAACCAGATGAAACGC
EY928820       --> CAAGCAGTGATAGTGTTTAGCGGTTGTATTGCCACAACCAGATGAAACGC
FD934578       --> CAAGCAGTGATAGTGTTTAGCGGTTGTATTGCCACAACCAGATGAAACGC
FD945044       --> ttaatAGTGATAGTGTTTAGCGGTTGTATTGCCACAACCAGATGAAACGC
EV545211       --> ........................................GATGAAACGC
FD547736       --> ..................................................

               101    -    151
UN23187        --> TCACGGCAATTTTAACAACCAAACCTTTGACCTGATCAACCAACTACCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX747935       <-- ..................................................
EW734289       <-- ..................................................
FD541194       <-- ..................................................
EY933314       <-- ..................................................
FD938118       <-- ..................................................
EV549817       <-- ..................................................
EY938339       <-- ..................................................
FD537534       --> TCACGGCAATTTTAACAACCCAACCTTTGACCTGATCAAACAACTACCAT
EX752008       --> TCACGGCAATTTTAACAACCAAACCTTTGACCTGATCAACCAACTACCAT
EY928820       --> TCACGGCAATTTTAACAACCAAACCTTTGACCTGATCAACCAACTACCAT
FD934578       --> TCACGGCAATTTTAACAACCAAACCTTTGACCTGATCAACCAACTACCAT
FD945044       --> TCACGGCAATTTTAACAACCAAACCTTTGACCTGATCAACCAACTACCAT
EV545211       --> TCACGGCAATTTTAACAACCAAACCTTTGACCTGATCAACCAACTACCAT
FD547736       --> ............................ggCCTGATCAACCAACTACCAT

               151    -    201
UN23187        --> ACAGGAACAAGTTT-TAAAGAATCTGTAGTTTCAGTTGTAAAGTAACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX747935       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW734289       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD541194       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933314       <-- ..................................................  Raphanus sativus var. oleiformis
FD938118       <-- ..................................................  Raphanus sativus var. oleiformis
EV549817       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938339       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD537534       --> ACAGGAACAAGTTT-CAAAGAATCTGTAGTTTCAGTTGTAAAGTAACAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752008       --> ATAGGAACAAGTTTCGAAAGAATCTGTAGTTTCAGTTGTAAAGTAACAAA  Raphanus raphanistrum subsp. maritimus
EY928820       --> ACAGGAACAAGTTT-TAAAGAATCTGTAGTTTCAGTTGTAAAGTAACAAA  Raphanus sativus var. oleiformis
FD934578       --> ACAGGAACAAGTTT-TAAAGAATCTGTAGTTTCAGTTGTAAAGTAACAAA  Raphanus sativus var. oleiformis
FD945044       --> ACAGGAACAAGTTT-TAAAGAATCTGTAGTTTCAGTTGTAAAGTAACAAA  Raphanus sativus cv Early Scarlet Globe
EV545211       --> ATAGGAACAAGTTTCGAAAGAATCTGTAGTTTCAGTTGTAAAGTAACAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547736       --> ATAGGAACAAGTTTCGAAAGAATCTGTAGTTTCAGTTGTAAAGTAACAAA  Raphanus raphanistrum subsp. raphanistrum (NY)

               201    -    251
UN23187        --> AATGCTTAAAGCACATTATCTGGAGGATATGGAGAAGAGCCGGACGCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX747935       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW734289       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD541194       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933314       <-- ..................................................  Raphanus sativus var. oleiformis
FD938118       <-- ..................................................  Raphanus sativus var. oleiformis
EV549817       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938339       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD537534       --> AATGCTTAAAGCACATTATCTGGAGGATATGGAGAAGAGCCGGACGCTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752008       --> AATGCTTAAAGCACATTATCTGGAGGATATAGAGAAGAGCCGGACGCTTG  Raphanus raphanistrum subsp. maritimus
EY928820       --> AATGCTTAAAGCACATTATCTGGAGGATATGGAGAAGAGCCGGACGCTTG  Raphanus sativus var. oleiformis
FD934578       --> AATGCTTAAAGCACATTATCTGGAGGATATGGAGAAAAGCCGGACGCTTG  Raphanus sativus var. oleiformis
FD945044       --> AATGCTTAAAGCACATTATCTGGAGGATATGGAGAAGGGCCG........  Raphanus sativus cv Early Scarlet Globe
EV545211       --> AATGCTTAAAGCACATTATCTGGAGGATATAGAGAAGAGCCGGACGCTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547736       --> AATGCTTAAAGCACATTATCTGGAGGATATAGAGAAGAGCCGGACGCTTG  Raphanus raphanistrum subsp. raphanistrum (NY)

               251    -    301
UN23187        --> AGCGGTCATACGAATGCATATACGGTAAAAGCTCATACGGAGGCTTAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX747935       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW734289       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD541194       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933314       <-- ..................................................  Raphanus sativus var. oleiformis
FD938118       <-- ..................................................  Raphanus sativus var. oleiformis
EV549817       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938339       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD537534       --> AGCGGTCATACGAATGCATATACGGTAAAAGCTCAAACGGAGGCTTAAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752008       --> AGCGGTCATACGAATGCATATACGGTAAAAGCTCATACGGAGGCTTAAGT  Raphanus raphanistrum subsp. maritimus
EY928820       --> AGCGGTCATACGAATGCATATACGGTAAAAGCTCAAACGGAGGCTTAAGT  Raphanus sativus var. oleiformis
FD934578       --> AGCGGTCATACGAATGCATATACGGTAAAAGCTCAAACGGAGGCTTAAGT  Raphanus sativus var. oleiformis
FD945044       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV545211       --> AGCGGTCATACGAATGCATATACGGTAAAAGCTCATACGGAGGCTTAAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547736       --> AGCGGTCATACGAATGCATATACGGTAAAAGCTCATACGGAGGCTTAAGT  Raphanus raphanistrum subsp. raphanistrum (NY)

               301    -    351
UN23187        --> TCTTCCGTCAAGTCTGTGATGGAAAGGTTCATCTGATCCACAAGTGTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX747935       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW734289       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD541194       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933314       <-- ..................................................  Raphanus sativus var. oleiformis
FD938118       <-- ..................................................  Raphanus sativus var. oleiformis
EV549817       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938339       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD537534       --> TCTTCCGTCAAGTCTGTGGTGGAAAGGTTCATCTGATCCACAAGTGTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752008       --> TCTTCCGTCAAGTCCGTGATGGAAAGGTTCATCTGATCCAAAAGTGTCAA  Raphanus raphanistrum subsp. maritimus
EY928820       --> TCTTCAGTCAAGTCTGTGATGGAAAGGTTCATCTGGTCCACAAGTGTCAA  Raphanus sativus var. oleiformis
FD934578       --> TCTTCAGTCAAGTCTGTGATGGAAAGGTTCATCTGGTCCACAAGTGTCAA  Raphanus sativus var. oleiformis
FD945044       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV545211       --> TCTTCCGTCAAGTCCGTGATGGAAAGGTTCATCTGATCCAAAAGTGTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547736       --> TCTTCCGTCAAGTCCGTGATGGAAAGGTTCATCTGATCCAAAAGTGTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)

               351    -    401
UN23187        --> GAACGCATTGAAAGTGTCTGCATTGCGGATCACAGATGCGATATAAGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX747935       <-- ..................................................
EW734289       <-- ..................................................
FD541194       <-- ..................................................
EY933314       <-- ..................................................
FD938118       <-- ..................................................
EV549817       <-- ..................................................
EY938339       <-- ..................................................
FD537534       --> GAACGCATTGAAAGTGTCTGCATTGCGGATCACAGATGCGATATAAGCCA
EX752008       --> GAACGCATTGAAAGTGTCTGCATTGCGGATCACAGATGCGATATAAGCCA
EY928820       --> GAACGCATTGAAAGTGTCTGCATTGCGGATCACAGATGCGATATAAGCCA
FD934578       --> GAACGCATTGAAAGTGTCTGCATTGCGGATCACAGATGCGATATAAGCCA
FD945044       --> ..................................................
EV545211       --> GAACGCATTGAAAGTGTCTGAATTGCGGATCACAGATGCGATATAAGCCA
FD547736       --> GAACGCATTGAAAGTGTCTGCATTGCGGATCACAGATGCGATATAAGCCA

               401    -    451
UN23187        --> CTGCAGG-C-GCTGCTTCCTTCAGTCTCGAGAGAGCCATTGTCTCTTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX747935       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW734289       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD541194       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933314       <-- ..................................................  Raphanus sativus var. oleiformis
FD938118       <-- ..................................................  Raphanus sativus var. oleiformis
EV549817       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938339       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD537534       --> CTGCAGG-C--CTGCTTCCTTCAGTCTCGAGACAGCCATTGTCTCTTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752008       --> CTGCAGG---GCTGCTTCCTTCAGTCTCGAGAGAGCCATTGTCTCTTTTG  Raphanus raphanistrum subsp. maritimus
EY928820       --> CTGCAGGGCTGCTGCTTCCTTCAGTCTCGAGAGAGCCATTGTCTCTTTTG  Raphanus sativus var. oleiformis
FD934578       --> CTGCAGGGCTGCTGCTTCCTTCAGTCTCGAGAGAGCCATTGTCTCTTTTG  Raphanus sativus var. oleiformis
FD945044       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV545211       --> CTGCAGG---GCTGCTTCCTTCAGTCTCGAGAGAGCCATTGTCTCTTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547736       --> CTGCAGG---GCTGCTTCCTTCAGTCTCGAGAGAGCCATTGTCTCTTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)

               451    -    501
UN23187        --> GTTGGTCTCCTTAAAAGGGCTACTAGAACTCGAAGTAGATGAGGGAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX747935       <-- ..................................................
EW734289       <-- ..................................................
FD541194       <-- ..................................................
EY933314       <-- ..................................................
FD938118       <-- ..................................................
EV549817       <-- ..................................................
EY938339       <-- ..................................................
FD537534       --> GTTGGTCTCCTTAAAAGGGCTACTAGAACTCGAAGTAGATGAGGGAAACA
EX752008       --> GTTGGTCTCCTTAAAAGGGCTACTAGAACTCGAAGTAGATGAGGGAAACA
EY928820       --> GTTGATCTCCTTAAAAGGGCTACTAAAACCCGAAGTAGATGAGGGAAACA
FD934578       --> GTTGATCTCCTTAAAAGGGCTACTAGAACCCGAAGTAGATGAGGGAAACA
FD945044       --> ..................................................
EV545211       --> GTTGGTCTCCTTAAAAGGGCTACTAGAACTCGAAGTAGATGAGGGAAACA
FD547736       --> GTTGGTCTCCTTAAAAGGGCTACTAGAACTCGAAGTAGATGAGGGAAACA

               501    -    551
UN23187        --> TGACGGATCATAGATTACATCTGCGCCTAGAACAATATCTGGACGATACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX747935       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW734289       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD541194       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933314       <-- ..................................................  Raphanus sativus var. oleiformis
FD938118       <-- ..................................................  Raphanus sativus var. oleiformis
EV549817       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938339       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD537534       --> TGACGGATCATAGATTACATCTGCGCCTAGAACAATATCTGGACGATACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752008       --> TGACGGATCATAGATTACATCTGCACCTAGAACAATATCTGGACGATACT  Raphanus raphanistrum subsp. maritimus
EY928820       --> TGACGGATCATAGATTACATCTGCGCCTAGAACAATATCTGGACGATACT  Raphanus sativus var. oleiformis
FD934578       --> TGACGGATCATAGATTACATCTGCGCCTAGAACAATATCTGGACGATACT  Raphanus sativus var. oleiformis
FD945044       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV545211       --> TGACGGATCATAGATTACATCTGCACCTAGAACAATATCTGGACGATACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547736       --> TGACGGATCATAGATTACATCTGCACCTAGAACAATATCTGGACGATACT  Raphanus raphanistrum subsp. raphanistrum (NY)

               551    -    601
UN23187        --> CGCTCACTTCACTATCCGATGCAGTTTCCCATGGGAGATGGATGCATTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX747935       <-- ....................GCAGTT-CCCATGGGAGGTGGATGCATT-A
EW734289       <-- ..........................................TGCATT-A
FD541194       <-- ..................................................
EY933314       <-- ..................................................
FD938118       <-- ..................................................
EV549817       <-- ..................................................
EY938339       <-- ..................................................
FD537534       --> CGCTCACTTCACTATCCGATGCAGTTTCCCATGGGAGATGGATGCATTTA
EX752008       --> CGCTCACTTCACTATCCGATGCAGTTTCCCATGGGAGGTGGATGCATTTA
EY928820       --> CGCTCACTTCACTATCCGATGCAGTTTCCCATGGGAGATGGATGCATTTA
FD934578       --> CGCTCACTTCACTATCCGATGCAGTTTCCCATGGGAGATGGATGCATTTA
FD945044       --> ..................................................
EV545211       --> CGCTCACTTCACTATCCGATGCAGTTTCCCATGGGAGATGGATGCATTTA
FD547736       --> CGCTCACTTCACTATCCGATGCAGTTTCCCATGGGAGATGGATGCATTTA

               601    -    651
UN23187        --> ACTCGTGAGTTCTCAGCTTCTCCGTGTTGTTTGAGCAGCTCGTCCTCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX747935       <-- ACTCGTGAGTTCTCAGCTTCTCCGTGT-GTTTGAGCAGCTCGTC-TCATA  Raphanus raphanistrum subsp. maritimus
EW734289       <-- ACTCGTGAGTTCTCAGCTTCTCCGTGT-G-TTGAGCAGCTCGTC-TCATA  Raphanus sativus cv Rat-Tail Radish #3870
FD541194       <-- ............................tgTTGAGCAGCTCGTC-TCATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933314       <-- ..................................................  Raphanus sativus var. oleiformis
FD938118       <-- ..................................................  Raphanus sativus var. oleiformis
EV549817       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938339       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD537534       --> ACTCGTGAGCTCTCAGCCTCTCCGTGTTGTTTGAGCAGCTCGTCCTCATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752008       --> ACTCGTGAGTTCTCAGCTTCTCCGTGTTGTTTGAGCAGCTCGTCCTCATA  Raphanus raphanistrum subsp. maritimus
EY928820       --> ACTCGTGAGCTCTCAGCTTCTCCGTGTTGTTTGAGCAGCTCGTCCTCATA  Raphanus sativus var. oleiformis
FD934578       --> ACTCGTGAGCTCTCAGCTTCTCCGTGTTGTTTGAGCAGCTCGTCCTCATA  Raphanus sativus var. oleiformis
FD945044       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV545211       --> ACTCGTGAGTTCTCAGCTTCTCCGTGTTGTTTGAGCAGCTCGTCCTCATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547736       --> ACTCGTGAGTTCTCAGCTTCTCCGTGTTGTTTGAGCAGCTCGTCCTCATA  Raphanus raphanistrum subsp. raphanistrum (NY)

               651    -    701
UN23187        --> GTTTAAGTGATTCCTCTCCAAGTTAAGCTTCATGTTAGATAGAGTTAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX747935       <-- GTTTAAGTGAT-CCTCTCCAAGTTAAGCTTCATGTTAGAGAGAGTTAAGA  Raphanus raphanistrum subsp. maritimus
EW734289       <-- GTTTAAGTGAT-CCTCTCCAAGTTAAGCTTCATGTTAGAGAGAGTTAAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD541194       <-- GTT-AAGTGATTCCTCTCCAAGTTAAGCTTCATGTTAGATAGAGTTAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933314       <-- ............................TTCATGT-AGATAGAGTTAAGA  Raphanus sativus var. oleiformis
FD938118       <-- ..................................................  Raphanus sativus var. oleiformis
EV549817       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938339       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD537534       --> GTTTAAGTGATTCCTCTCCAAGTTAAGCTTCATGTTAGATAGAGTTAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752008       --> GTTTAAGTGATTCCTCTCCAAGTTAAGCTTCATGTTAGAGAGAGTTAAGA  Raphanus raphanistrum subsp. maritimus
EY928820       --> GTTTAAGTCATTCCTCTCCAAGTTAAGCTTCATGTTAGATAGAGTTAAGA  Raphanus sativus var. oleiformis
FD934578       --> GTTTAAGTCATTCCTCTCCAAGTTAAGCTTCATGTTAGATAGAGTTAAGA  Raphanus sativus var. oleiformis
FD945044       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV545211       --> GTTTAAGTGATTCCTCTCCAAGTTAAGCTTCATGTTAGAGAGAGTTAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547736       --> GTTTAAGTGATTCCTCTCCAAGTTAAGCTTCATGTTAGAGAGAGTTAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)

               701    -    751
UN23187        --> GATCTCCGTCTGTTAATATCACCTTCTTTGCCTTTACATGTGCAAGACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX747935       <-- GATCTCCGTCTGTTAATATCACCTTATTTGCCTTTACATGTGCAAGACAA  Raphanus raphanistrum subsp. maritimus
EW734289       <-- GATCTCCGTCTGTTAATATCACCTTATTTGCCTTTACATGTGCAAGACAA  Raphanus sativus cv Rat-Tail Radish #3870
FD541194       <-- GATCTCCGTCTGTTAATATCACCTTCTTTGCCTTTACATGTGCAAGACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933314       <-- GATCTC-GTCTGTTAATATCAC-TTCTTTGCCTTTACATGTGCAAGACAA  Raphanus sativus var. oleiformis
FD938118       <-- ..........TGTTAATATCACTTTCTTTGCCTTTACATGTGCAAGACAA  Raphanus sativus var. oleiformis
EV549817       <-- ............TTAATATCACCTTATTTGCCTTTACATGTGCAAGACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938339       <-- .........................CTTTGCCTTTACATGTGCAAGACAA  Raphanus sativus cv Early Scarlet Globe
FD537534       --> GATCTCCGTCTGTTAATATCACCTTCTTTGCCTTTACATGTGCAA.....  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752008       --> GATCTCCGTCTGTTAATATCACCTTATTTGCCTTTACATGTGCAAGACAA  Raphanus raphanistrum subsp. maritimus
EY928820       --> GATCTCCGTCTGTTAATATCACCTTCTTTGCCTTTACATGTGCAAGACAA  Raphanus sativus var. oleiformis
FD934578       --> GATCTCCGTCTGTTAATATCACCTTCTTTGCCTT................  Raphanus sativus var. oleiformis
FD945044       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV545211       --> GATCTCCGTCTGTTAATATCACCTTATTTGCCTTTACATGTGCAAGACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547736       --> AATCTCCGTCTGTTAATATCACCTTATTTGCCTTTACATGTGCAAGACAA  Raphanus raphanistrum subsp. raphanistrum (NY)

               751    -    801
UN23187        --> ATTCCGACCAAACCAA-CTCCAGAACCAACCTCAAAACACGATTTATCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX747935       <-- ATTCCGACCAAACCAAACTCCAGAACCAACCTCAAAACACGATTTATCAG  Raphanus raphanistrum subsp. maritimus
EW734289       <-- ATTCCGACCAAACCAA-CTCCAGAACCAACCTCAAAACACGATTTATCAG  Raphanus sativus cv Rat-Tail Radish #3870
FD541194       <-- ATTCCGACCAAACCAA-CTCCAGAACCAACCTCAAAACAGGATTTATCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933314       <-- ATTCCAACCAAACCAA-CTCCAGAACCAACCTCAAAACACGATTTATCAG  Raphanus sativus var. oleiformis
FD938118       <-- ATTCCAACCAAACCAA-CTCCAGAACCAACCTCAAAACACGATTTATCAG  Raphanus sativus var. oleiformis
EV549817       <-- ATTCCGACCAAACCAA-CTCCAGAACCAACCTCAAAACACGATTTATCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938339       <-- ATTCCAACCAAACCAA-CTCCAGAACCAACCTCAAAACAGGATTTATCAG  Raphanus sativus cv Early Scarlet Globe
FD537534       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752008       --> ATTCCGACCAAACCAA-CTCCAGAACCAACCTCAAAACACGATTTATCAG  Raphanus raphanistrum subsp. maritimus
EY928820       --> ATTCCAACCAAACCAA-CTCCAGAACCAACCTCAAAACACGATTTATCAG  Raphanus sativus var. oleiformis
FD934578       --> ..................................................  Raphanus sativus var. oleiformis
FD945044       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV545211       --> ATTCCGACCAAACCAA-CTCCAGAACCAACCTCAAAACACGATTTATCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547736       --> ATTCCGACCAAACCAA-CTCCAGAACCAAACTCAAAACACGATTTATCAG  Raphanus raphanistrum subsp. raphanistrum (NY)

               801    -    851
UN23187        --> TGAATAACTCTGGATATGACAGAACAAACTCTGACAAAAACAAACTCGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX747935       <-- TGAATAACTCTGGATATGACAGAACAAACTCTGACAAAAACAAACTCGAA
EW734289       <-- TGAATAACTCTGGATATGACAGAACAAACTCTGACAAAAACAAACTCGAA
FD541194       <-- CGAACAACTCTGGATATGACAGAACAAACTCTGACAAAAACAAACTCGAA
EY933314       <-- TGAATAACTCTGGATATGACAGAACAAACTCTGACAAAAACAAACTTGAA
FD938118       <-- TGAATAACTCTGGATATGACAGAACAAACTCTGACAAAAACAAACTTGAA
EV549817       <-- TGAATAACTCTGGATATGACAGAACAAACTCTGACAAAAACAAACTCGAA
EY938339       <-- TGAATAACTCTGGATATGACAGAACAAACTCTGATAAAAACAAACTTGAA
FD537534       --> ..................................................
EX752008       --> TGAATAACTCTGGATATGACAGAACAAACTCTGACAAAAAaaa.......
EY928820       --> TGAATAACTCTGGATATGACAGAACAAACTCTGA................
FD934578       --> ..................................................
FD945044       --> ..................................................
EV545211       --> TGAATAACTCTGGATATGACAGAACAAACTCTGAC...............
FD547736       --> TGAATAACTCTGGATATGACAGAACAAACTCTGACAAAAA..........

               851    -    901
UN23187        --> GGCCAGATTGAACACCCGGTATCTCCTTCAAGCATGTTCAATGAACACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX747935       <-- GGCCAGATTGAACACCCGGTATCTCCTTCAAGCATGTTCAATGAACACTG
EW734289       <-- GGCCAGATTGAACACCCGGTATCTCCTTCAAGCATGTTCAATGAACACTG
FD541194       <-- GGCCAGATTGAACACCCGGTATCTCCTTCAAGCATGTTCAATGAACACTG
EY933314       <-- GGCCAGATTGAACACCCGGTATCTCCTTCAAGCATGTTCAATGAACACTG
FD938118       <-- GGCCAGATTGAACACCCGGTATCTCCTTCAAGCATGTTCAATGAACACTG
EV549817       <-- GGCCAGATTGAACACCCGGTATCTCCTTCAAGCATGTTCAATGAACACTG
EY938339       <-- GGCCAGATTGAACACCCGGTATCTCCTTCAAGCATGTTCAATGAACACTG
FD537534       --> ..................................................
EX752008       --> ..................................................
EY928820       --> ..................................................
FD934578       --> ..................................................
FD945044       --> ..................................................
EV545211       --> ..................................................
FD547736       --> ..................................................

               901    -    951
UN23187        --> CAGCGGAACAACTAACTTCCTTGAACTTGGACAACTTGGATGTTCGTATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX747935       <-- CAGCGGAACAACAAACTTCCTTGAACTTGGACAACTTGGATGTTCGTATA
EW734289       <-- CAGCGGAACAACAAACTTCCTTGAACTTGGACAACTTGGATGTTCGTATA
FD541194       <-- CAGCGGAACAACTAACTTCCTTGAACTTGGACAACTTGGATGTTCGTATA
EY933314       <-- CAGCGGAACAACTAACTTCCTTGAACTTGGACAACTTGGATGTCCGTATA
FD938118       <-- CAGCGGAACAACTAACTTCCTTGAACTTGGACAACTTGGATGTCCGTATA
EV549817       <-- CAGCGGAACAACAAACTTCCTTGAAATTGGACAACTTGGATGTTCGTATA
EY938339       <-- CAGCGGAACAACTAACTTCCTTGAACTTGGACAACTTGGATGTTCGTATA
FD537534       --> ..................................................
EX752008       --> ..................................................
EY928820       --> ..................................................
FD934578       --> ..................................................
FD945044       --> ..................................................
EV545211       --> ..................................................
FD547736       --> ..................................................

               951    -   1001
UN23187        --> AACCT---TCAGGGAAAAGAAAAGAGATGAACTTGGTGATCCTTATGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX747935       <-- AACCTACTTCAGGGAAAAGAAAAGAGATGAACCTGGTGATCCTTATGTTT
EW734289       <-- AACCT---TCAGGGAAAAGAAAAGAGATGAACTTGGTGATCCTTATGTTT
FD541194       <-- AAACT---TCAGGGAAAAGAAAAGAGATGAACTTGGTGATCCTTATGTTT
EY933314       <-- AACCT---TCTGGGAAAAGAAAAGAGATGAACTTGGTAATCCTTATGTTT
FD938118       <-- AACCT---TCTGGGAAAAGAAAAGAGATGAACTTGGTAATCCTTATGTTT
EV549817       <-- AACCT---TCAGGGAAAAGAAAAGAGATGAACTTGGTGATCCTTATGTTT
EY938339       <-- AACCT---TCTGGGAAAAGAAAAGAGATGAACTTGGTGATCCTTATGTTT
FD537534       --> ..................................................
EX752008       --> ..................................................
EY928820       --> ..................................................
FD934578       --> ..................................................
FD945044       --> ..................................................
EV545211       --> ..................................................
FD547736       --> ..................................................

               1001   -   1051
UN23187        --> TCTTTCACCAATGCATCCTCCTTAGAAGCCGCTGACATGTAAAGAGCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX747935       <-- TCTTTCACCAATGCATCCTCCTTAGAAGCCGCTGACATGTGAAGAGCATA
EW734289       <-- TCTTTCACCAATGCATCCTCCTTAGAAGCCGCTGACATGTGAAGAGCATA
FD541194       <-- TCTTTCACCAATGCATCCTCCTTAGAAGCCGCTGACATGTAAAGAGCATA
EY933314       <-- TCTTTCACCAATGCATCCTCCTTAGAAGCCGCTGACATGTAAAGAGCATA
FD938118       <-- TCTTTCACCAATGCATCCTCCTTAGAAGCCGCTGACATGTAAAGAGCATA
EV549817       <-- TCTTTCACCAATGCATCCTCCTTAGAAGCCGCTGACATGTGAAGAGCATA
EY938339       <-- TCTTTCACCAATGCATCCTCCTTAGAAGCCGCTGACATGTAAAGAGCATA
FD537534       --> ..................................................
EX752008       --> ..................................................
EY928820       --> ..................................................
FD934578       --> ..................................................
FD945044       --> ..................................................
EV545211       --> ..................................................
FD547736       --> ..................................................

               1051   -   1101
UN23187        --> CTCTTCATACACTTCATCTAACACTTCACCTTTCTCCAACTCAACTTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX747935       <-- CTCTTCATACACTTCATCTAACACTTCACCTTTCTCCAACTCAACTTCAG
EW734289       <-- CTCTTCATACACTTCATCTAACACTTCACCTTTCTCCAACTCAACTTCAG
FD541194       <-- CTCTTCGTACACTTCATCTAACACTTCACTTTTCTCCAACTCAACTTCAG
EY933314       <-- CTCTTCATACACTTCATCTAACACTTCACCTTTCTCCAACTCAACTTCAG
FD938118       <-- CTCTTCATACACTTCATCTAACACTTCACCTTTCTCCAACTCAACTTCAG
EV549817       <-- CTCTTCATACACTTCATCTAACACTTCACCTTTCTCCAACTCAACTTCAG
EY938339       <-- CTCTTCATACACTTCATCTAACACTTCACTTTTCTCCAACTCAACTTCAG
FD537534       --> ..................................................
EX752008       --> ..................................................
EY928820       --> ..................................................
FD934578       --> ..................................................
FD945044       --> ..................................................
EV545211       --> ..................................................
FD547736       --> ..................................................

               1101   -   1151
UN23187        --> TTATGAGTTTCTTCAGTAACTTTTTCGCGTATGATGCGTTACCATTGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX747935       <-- TTATGAGTTTCTTCAGTAACTTTTTCGCGTATGATGCGTTACCATTGGCA
EW734289       <-- TTATGAGTTTCTTCAGTAACTTTTTCGCGTATGATGCGTTACCATTGGCA
FD541194       <-- TTATAAGTTTCTTCAGTAACTTTTTCGCGTATGATGCGTTACCATTGGCA
EY933314       <-- TTATGAGTTTCTTCAGTAACTTTTTCGCGTATGATGCGTTACCATTGGCA
FD938118       <-- TTATGAGTTTCTTCAGTAACTTTTTCGCGTATGATGCGTTACCATTGGCA
EV549817       <-- TTATGAGTTTCTTCAGTAACTTTTTCGCGTATGATACGTTACCATTGGCA
EY938339       <-- TTATGAGTTTCTTCAGCAACTTTTTCGCGTATGATGCGTTACCATTGGCA
FD537534       --> ..................................................
EX752008       --> ..................................................
EY928820       --> ..................................................
FD934578       --> ..................................................
FD945044       --> ..................................................
EV545211       --> ..................................................
FD547736       --> ..................................................

               1151   -   1201
UN23187        --> GCAGCTTTGACGCAAACCTCCCACAGAAACCTCTGGACACTCTCCGTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX747935       <-- GCAGCTTTGACGCAAACCTCCCACAGAAACCTCTGCACACTCTCCGTGAG
EW734289       <-- GCAGCTTTGACGCAAACCTCCCACAGAAACCTCTGCACACTCTCCGTAAG
FD541194       <-- GCAGCTTTGGCGCAAACCTCCCACAGAAACCTCTGGACACTCTCCGTAAG
EY933314       <-- GCAGCTTTGACGCAAACCTCCCACAGAAACCTCTGGACACTCTCCGTAAG
FD938118       <-- GCAGCTTTGACGCAAACCTCCCACAGAAACCTCTGGACACTCTCCGTAAG
EV549817       <-- GCAGCTTTGACGCAAACCTCCCACAGAAACCTCTGCACACTCTCCGTGAG
EY938339       <-- GCAGCTTTGACGCAAACCTCCCACAGAAACCTCTGGACACTCTCCGTAAG
FD537534       --> ..................................................
EX752008       --> ..................................................
EY928820       --> ..................................................
FD934578       --> ..................................................
FD945044       --> ..................................................
EV545211       --> ..................................................
FD547736       --> ..................................................

               1201   -   1251
UN23187        --> TGATCCTCCGGAACACCCTCTCGCGAGAGCAATGACGGAGTCCACCGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX747935       <-- TGATCCTCCTGAACACCCTCTCGCGAGAGCAATGACGGAGTCCACCGGTT
EW734289       <-- TGATCCTCCTGAACACCCTCTCGCGAGAGCAATGACGGAGTCCACCGGTT
FD541194       <-- TGATCCTCCGGAACAGCCTCTCGCTAGAGCAATGACGGAGTCCACCGGTT
EY933314       <-- TGATCCTCCGGAACACCCTCTCGCGAGAGCAATGACGGAGTCCACCGGTT
FD938118       <-- TGATCCTCCGGAACACCCTCTCGCGAGAGCAATGACGGAGTCCACCGGTT
EV549817       <-- TGATCCTCCTGAACACCCTCTCGCGAGAGCAATGACGGAGTCCACCGGTT
EY938339       <-- TGATCCTCCGGAACACCCTCTCGCGAGAGAAATGACGGAGTCCACCGGTT
FD537534       --> ..................................................
EX752008       --> ..................................................
EY928820       --> ..................................................
FD934578       --> ..................................................
FD945044       --> ..................................................
EV545211       --> ..................................................
FD547736       --> ..................................................

               1251   -   1301
UN23187        --> CCATTGCGAGGAAAGCGGAGAGTACATGAAGGTACTGCTGTGACTCTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX747935       <-- CCACTGCGAGGAAAGCGGAGAGTACATGAAGGTACTGCTGTGACTCTGCC
EW734289       <-- CCACTGCGAGGAAAGCGGAGAGTGCATGAAGGTACTGCTGTGACTCTGCC
FD541194       <-- CCATTGCGAGGAAAGCAGAGAGTACATGAAGGTAC---TGTGACTCTGCC
EY933314       <-- CCATTGCGAGGAAAGCAGATAGTACATGAAGGTACTGCTGTGACTCTGCC
FD938118       <-- CCATTGCGAGGAAAGCAGATAGTACATGAAGGTACTGCTGTGACTCTGCC
EV549817       <-- CCACTGCGAGGAAAGCGGAGAGTACATGAAGGTACTGCTGTGACTCTGCC
EY938339       <-- CCATTGCGAGGAAAGCGGAGAGTACATGAAGGTACTGCTGTGACTCTACC
FD537534       --> ..................................................
EX752008       --> ..................................................
EY928820       --> ..................................................
FD934578       --> ..................................................
FD945044       --> ..................................................
EV545211       --> ..................................................
FD547736       --> ..................................................

               1301   -   1351
UN23187        --> TCCGTCGAGTTCTCGCTCGCCGCCATGACTTCGCCGTGCCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX747935       <-- TCCGTCGAGTTCTCGCTCGCCGCCATGACTTCGCCGTGCCCC
EW734289       <-- TCCGTCGAGTTCTCGCTCGCCGCCATGACTTCGCCGTcc...
FD541194       <-- TCTGTCGAGTTCTCGCTCGCCGCCATGACTTCGCCGTct...
EY933314       <-- TCCGTCGAGTTCTCGCTCGCCGCCATGACTTCGCCGTGCCCC
FD938118       <-- TCCGTCGAGTTCTCGCTCGCCGCCATGACTTCGCCGTGCCCC
EV549817       <-- TCCGTCGAGTTCTCGCTCGCCGCCATGACTTCGCCGTcc...
EY938339       <-- TCCGTCGAGTTCTCGCTCGCCGCCATGACTTCGCCGTcc...
FD537534       --> ..........................................
EX752008       --> ..........................................
EY928820       --> ..........................................
FD934578       --> ..........................................
FD945044       --> ..........................................
EV545211       --> ..........................................
FD547736       --> ..........................................