Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN23192

               1      -     51
UN23192        --> ATGGGCTGTACCAAAAGGCCCATAGGCCCAAAATGTATACATTAAACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905033       <-- ..................................................
FD556380       <-- ..................................................
EX771900       <-- ..................................................
EV536031       <-- ..................................................
EV566726       <-- ..................................................
EV567335       <-- ..................................................
EV538534       <-- ..................................................
EV569145       <-- ..................................................
EX903393       <-- ..................................................
FD962844       <-- ..................................................
EY897474       <-- ..................................................
FD559104       <-- ..................................................
FD966160       <-- ..................................................
FD961929       <-- ..................................................
EV537475       <-- ..................................................
FD986085       --> ATGGGCTGTACCAAAAGGCCCATAGGCCCAAAATGTATACATTAAACAAA
EX759403       --> .........cCCAAAAG-CCCATAGGCCCAAAATGTATACATTAAACAAA
EX775973       --> ..................................................
FD554870       --> ..................................................
EV540565       --> ..................................................
FD537911       --> ..................................................
EV573738       --> ..................................................
EY902887       --> ..................................................
FD967810       --> ..................................................
FD968329       --> ..................................................
FD538234       --> ..................................................
FD966754       --> ..................................................
EV542521       --> ..................................................
FD537505       --> ..................................................
FD538369       --> ..................................................
EV541693       --> ..................................................
EX759014       --> ..................................................

               51     -    101
UN23192        --> GACTTTCTTTATTACAGACGGCAAGGTCACATATGGCGTCATTGTCATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905033       <-- ..................................................
FD556380       <-- ..................................................
EX771900       <-- ..................................................
EV536031       <-- ..................................................
EV566726       <-- ..................................................
EV567335       <-- ..................................................
EV538534       <-- ..................................................
EV569145       <-- ..................................................
EX903393       <-- ..................................................
FD962844       <-- ..................................................
EY897474       <-- ..................................................
FD559104       <-- ..................................................
FD966160       <-- ..................................................
FD961929       <-- ..................................................
EV537475       <-- ..................................................
FD986085       --> GACTTTCTTTATTACAGACGGCAAGGTCACATATGGCGTCATTGTCATGA
EX759403       --> GACTTTCTTTATTACAGACAGCAAGGTCACATATGGCGTCATTGTCATGA
EX775973       --> ..................................................
FD554870       --> ..................................................
EV540565       --> ..................................................
FD537911       --> ..................................................
EV573738       --> ..................................................
EY902887       --> ..................................................
FD967810       --> ..................................................
FD968329       --> ..................................................
FD538234       --> ..................................................
FD966754       --> ..................................................
EV542521       --> ..................................................
FD537505       --> ..................................................
FD538369       --> ..................................................
EV541693       --> ..................................................
EX759014       --> ..................................................

               101    -    151
UN23192        --> TTCAGAAGAAACATTTCTACCGTAAACAAAAAGTTTGTAGAAACTTATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905033       <-- ..................................................
FD556380       <-- ..................................................
EX771900       <-- ..................................................
EV536031       <-- ..................................................
EV566726       <-- ..................................................
EV567335       <-- ..................................................
EV538534       <-- ..................................................
EV569145       <-- ..................................................
EX903393       <-- ..................................................
FD962844       <-- ..................................................
EY897474       <-- ..................................................
FD559104       <-- ..................................................
FD966160       <-- ..................................................
FD961929       <-- ..................................................
EV537475       <-- ..................................................
FD986085       --> TTCAGAAGAAACATTTCTACCGTAAACAAAAAGTTTGTAGAAACTTATGG
EX759403       --> TTCAAAAGAAACATTTCTACCGTAAACAAAAAGTTTGTAGAAACTTATGG
EX775973       --> ......aaAAACATTTCTACCGTAAACAAAAAGTTTGTAAAAACTTATGG
FD554870       --> ............................................TTATGG
EV540565       --> ..................................................
FD537911       --> ..................................................
EV573738       --> ..................................................
EY902887       --> ..................................................
FD967810       --> ..................................................
FD968329       --> ..................................................
FD538234       --> ..................................................
FD966754       --> ..................................................
EV542521       --> ..................................................
FD537505       --> ..................................................
FD538369       --> ..................................................
EV541693       --> ..................................................
EX759014       --> ..................................................

               151    -    201
UN23192        --> ATCAAGAAACACATGCTTGATAATATCAACGACTATATACTGTCTTTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905033       <-- ATCAAGAAACACATGCTTGATAATATCAACGACTATATACTGTCTTTCTC
FD556380       <-- ..................................................
EX771900       <-- ..................................................
EV536031       <-- ..................................................
EV566726       <-- ..................................................
EV567335       <-- ..................................................
EV538534       <-- ..................................................
EV569145       <-- ..................................................
EX903393       <-- ..................................................
FD962844       <-- ..................................................
EY897474       <-- ..................................................
FD559104       <-- ..................................................
FD966160       <-- ..................................................
FD961929       <-- ..................................................
EV537475       <-- ..................................................
FD986085       --> ATCAAGAAACACATGCTTGATAATATCAACGACTATATACTGTCTTTCTC
EX759403       --> ATCAAGAAACACATGCTTGATAATATCAACGACTATATACTGTCTTTCTC
EX775973       --> ATCAAGAAACACATGCTTGATAATATCAACGACTATATACTGTCTTTCTC
FD554870       --> ATCAAGAAACACATGCTTGATAATATCAACGACTATATACTGTCTTTCTC
EV540565       --> ..............GCTTGATAATATCAACGACTATATACTGTCTTTCTC
FD537911       --> ..................GATAATATCAACGACTATATACTGTCTTTCTC
EV573738       --> .....................AATATCAACGACTATATACTGTCTTTCTC
EY902887       --> .....................AATATCAACGACTATATACTGTCTTTCTC
FD967810       --> .....................AATATCAACGACTATATACTGTCTTTCTC
FD968329       --> .....................gcTATCAACGACTATATACTGTCTTTCTC
FD538234       --> ........................ATCAACGACTATATACTGTCTTTCTC
FD966754       --> ...........................ggCGACTATATACTGTCTTTCTC
EV542521       --> .......................................CTGTCTTTCTC
FD537505       --> ...........................................CTTTCTC
FD538369       --> ..................................................
EV541693       --> ..................................................
EX759014       --> ..................................................

               201    -    251
UN23192        --> GCTTTATTTAACCATTATTTTGCCCAAGTGATCGGCTTCATTATTGGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905033       <-- GCTTTATTTAACCATTATTTTGCCCAAGTGATCGGCTTCATTATTGGATA
FD556380       <-- .............................................GGATA
EX771900       <-- ..................................................
EV536031       <-- ..................................................
EV566726       <-- ..................................................
EV567335       <-- ..................................................
EV538534       <-- ..................................................
EV569145       <-- ..................................................
EX903393       <-- ..................................................
FD962844       <-- ..................................................
EY897474       <-- ..................................................
FD559104       <-- ..................................................
FD966160       <-- ..................................................
FD961929       <-- ..................................................
EV537475       <-- ..................................................
FD986085       --> GCTTTATTTAACCATTATTTTGCCCAAGTGATCGGCTTCATCATTGGATA
EX759403       --> GCTTTATTTAACCATTATTTTGCCCAAGTGATCGGCTTCATTATTGGATA
EX775973       --> GCTTTATTTAACCATTATTTTGCCCAAGTGATCGGCTTCATCATTGGATA
FD554870       --> GCTTTATTTAACCATTATTTTGCCCAAGTGATCGGCTTCATCATTGGATA
EV540565       --> GCTTTATTTAACCATTATTTTGCCCAAGTGATCGGCTTCATTATTGGATA
FD537911       --> GCTTTATTTAACCATTATTTTGCCCAAGTGATCGGCTTCATTATTGGATA
EV573738       --> GCTTTATTTAACCATTATTTTGCCCAAGTGATCGGCTTCATCATTGGATA
EY902887       --> GCTTTATTTAACCATTATTTTGCCCAAGTGATCGGCTTCATTATTGGATA
FD967810       --> GCTTTATTTAACCATTATTTTGCCCAAGTGATCGGCTTCATTATTGGATA
FD968329       --> GCTTTGTTTAACCATTATTTTGCCCAAGTGATCGGCTTCATTATTGGATG
FD538234       --> GCTTTGTTTAACCATTATTTTGCCCAAGTGATCGGCTTCATTATTGGATA
FD966754       --> GCTTTGTTTAACCATTATTTTGCCCAAGTGATCGGCTTCATCATTGGATA
EV542521       --> GCTTTATTTAACCATTATTTTGCCCAAGTGATCGGCTTCATTATTGGATA
FD537505       --> GCTTTATTTAACCATTATTTTGCCCAAGTGATCGGCTTCATTATTGGATA
FD538369       --> ..................................................
EV541693       --> ..................................................
EX759014       --> ..................................................

               251    -    301
UN23192        --> CACACTAGTAGTTTAATTAGTTGTAGCAACAAAGTAGTTTCTTTTTATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905033       <-- CACACTAGTAGTTTAATTAGTTGTAGCAACAAAGTAGTTTCTTTTTATAA
FD556380       <-- CACACTAGTAGTTTAATTAGTTGTAGCAACAAAGTAGTTTCTTTTTATAA
EX771900       <-- ..................................................
EV536031       <-- ..................................................
EV566726       <-- ..................................................
EV567335       <-- ..................................................
EV538534       <-- ..................................................
EV569145       <-- ..................................................
EX903393       <-- ..................................................
FD962844       <-- ..................................................
EY897474       <-- ..................................................
FD559104       <-- ..................................................
FD966160       <-- ..................................................
FD961929       <-- ..................................................
EV537475       <-- ..................................................
FD986085       --> CACACTAGTAGTTTAATTAGTTGTAGCAACAAAGTAGTTTCTTTTTATAA
EX759403       --> CACACTAGTAGTTTAATTAGTTGTAGCAACAAAGTAGTTTCTTTTTATAA
EX775973       --> CACACTAGTAGTTTAATTAGTTGTAGCAACAAAGTAGTTTCTTTTTATAA
FD554870       --> CACACTAGTAGTTTAATTAGTTGTAGCAACAAAGTAGTTTCTTTTTACAA
EV540565       --> CACACTAGTAGTTTAATTAGTTGTAGCAACAAAGTAGTTTCTTTTTATAA
FD537911       --> CACACTAGTAGTTTAATTAGTTGTAGCAACAAAGTAGTTTCTTTTTATAA
EV573738       --> CACACTAGTAGTTTAATTAGTTGTAGCAACAAAGTAGTTTCTTTTTATAA
EY902887       --> CACACTAATAGTTTAATTAGTTGTAGCAACAAAGTAGTTTCTTTTTATAA
FD967810       --> CACACTAGTAGTTTAATTAGTTGTAGCAACAAAGTAGTTTCTTTTTATAA
FD968329       --> CACACTAGTAGTTTAATTAGTTGTAGCAACAAAGTAGTTTCTTTTTATAA
FD538234       --> CACACTAGTAGTTTAATTAGTTGTAGCAACAAAGTAGTTTCTTTTTATAA
FD966754       --> CACACTAGTAGTTTAATTAGTTGTAGCAGCAAAGTAGTTTCTTTTTATAA
EV542521       --> CACACTAGTAGTTTAATTAGTTGTAGCAACAAAGTAGTTTCTTTTTATAA
FD537505       --> CACACTAGTAGTTTAATTAGTTGTAGCAACAAAGTAGTTTCTTTTTATAA
FD538369       --> ..................AGTTGTAGCAACAAAGTAGTTTCTTTTTATAA
EV541693       --> ..............................................ATAA
EX759014       --> ..................................................

               301    -    351
UN23192        --> AGGCCATAAAAACGGCACGATGTTTTTACTCTGTTGTTGTACATAACTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905033       <-- AGGCCATAAAAACGGCACGATGTTTTTACTCTGTTGTTGTACATAACTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556380       <-- AGGCCATAAAAACGGCACGGTGTTTTTACTCTGTTGTTGTACATAACTTG  Raphanus raphanistrum subsp. landra
EX771900       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV536031       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566726       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV567335       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV538534       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569145       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX903393       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD962844       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY897474       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD559104       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD966160       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD961929       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV537475       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD986085       --> AGGCCATAAAAACGGCACGGTGTTTTTACTCTGTTGTTGTACATAACTTG  Raphanus raphanistrum subsp. landra
EX759403       --> AGGCCATAAAAACGGCACGATGTTTTTACTCTGTTGTTGTACATAACTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775973       --> AGGCCATAAAAACGGCACGGTGTTTTTACTCTGTTGTTGTACATAACTTG  Raphanus raphanistrum subsp. landra
FD554870       --> AGGCCATAAAAACGGCACGGTGTTTTTACTCTGTTGTTGTACATAACTTG  Raphanus raphanistrum subsp. landra
EV540565       --> AGGCCATAAAAACGGCACGATGTTTTTACTCTGTTGTTGTACATAACTCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537911       --> AGGCCATAAAAACGGCACGATGTTTTTACTCTGTTGTTGTACGTAACTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573738       --> AGGCCATAAAAACGGCACGGTGTTTTTACTCTGTTGTTGTACATAACTTG  Raphanus raphanistrum subsp. landra
EY902887       --> AGGCCATAAAAACGGCACGATGTTTTTACTCTGTTGTTGTACATAACTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967810       --> AGGCCATAAAAACGGCACGATGTTTTTACTCTGTTGTTGTACATAACTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968329       --> AGGCCATAAAAACGGCACGATGTTTTTACTCTGTTGTTGTACATAACTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538234       --> AGGCCATAAAAACGGCACGATGTTTTTACTCTGTTGTTGTACATAACTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966754       --> AGGCCATAAAAACGGCACGATGTTTTTACTCTGTTGTTGTACATAACTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542521       --> AGGCCATAAAAACGGCACGATGTTTTTACTCTGTTGTTGTACATAACTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537505       --> AGGCCATAAAAACGGCACGATGTTTTTACTCTGTTGTTGTACATAACTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538369       --> AGGCCATAAAAACGGCACGATGTTTTTACTCTGTTGTTGTACATAACTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541693       --> AGGCCATAAAAACGGCACGATGTTTTTACTCTGTTGTTGTACATAACTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759014       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               351    -    401
UN23192        --> TTGAAGAAGGAGAGAATCTCCTCCGAGACTTGTTTAGCCTTCTCTTGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905033       <-- TTGAAGAAGGAGAGAATCTCCTCCGAGACTTGTTTAGCCTTCTCTTGCTG
FD556380       <-- TTGAAGAAGGAGAGAATCTCCTCCGAGACTTGTTTAGCCTTCTCTTGCTG
EX771900       <-- ..................................................
EV536031       <-- ..................................................
EV566726       <-- ..................................................
EV567335       <-- ..................................................
EV538534       <-- ..................................................
EV569145       <-- ..................................................
EX903393       <-- ..................................................
FD962844       <-- ..................................................
EY897474       <-- ..................................................
FD559104       <-- ..................................................
FD966160       <-- ..................................................
FD961929       <-- ..................................................
EV537475       <-- ..................................................
FD986085       --> TTGAAGAAGGAGAGAATCTCCTCCGAGACTTGTTTAGCCTTCTCTTGCTG
EX759403       --> TTGAAGAAGGAGAGAATCTCCTCCGAGACTTGTTTAGCCTTCTCTTGCTG
EX775973       --> TTGAAAAAGGAGAGAATCTCCTCCGAGACTTGTTTAGCCTTCTCTTGCTG
FD554870       --> TTGAAGAAGGAGAGAATCTCCTCCGAGACTTGTTTAGCCTTCTCTTGTTG
EV540565       --> TTGAAGAAGGAGAGAATCTCCTCCGAGACTTGTTTAGCCTTCTCTTGCTG
FD537911       --> TTGAAGAAGGAGAGAATCTCCTCCGAGACTTGTTTAGCCTTCTCTTGCTG
EV573738       --> TTGAAGAAGGAGAGAATCTCCTCCGAGACTTGTTTAGCCTTCTCTTGCTG
EY902887       --> TTGAAAAAGGAaaaaa..................................
FD967810       --> TTGAAGAAGGAGAGAATCTCCTCCGAGACTTGTTTAGCCTTCTCTTGCTG
FD968329       --> TTGAAGAAGGAGAGAATCTCCTCCGAGACTTGTTTAGCCTTCTCTTGCTG
FD538234       --> TTGAAGAAGGAGAGAATCTCCTCCGAGACTTGTTTAGCCTTCTCTTGCTG
FD966754       --> TTGAAGAAGGAGAGAATCTCCTCCGAGACTTGTTTAGCCTTCTCTTGCTG
EV542521       --> TTGAAGAAGGAGAGAATCTCCTCCGAGACTTGTTTAGCCTTCTCTTGCTG
FD537505       --> TTGAAAAAGGAGAGAATCTCCTCCGAAACTTGTTTAGCCTTCTCTTGCTG
FD538369       --> TTGAAGAAGGAGAGAATCTCCTCCGAGACTTGTTTAGCCTTCTCTTGCTG
EV541693       --> TTGAAGAAGGAGAGAATCTCCTCCGAGACTTGCTTAGCCTTCTCTTGCTG
EX759014       --> ....................ccccaaaACTTGTTTAGCCTTCTCTTGCTG

               401    -    451
UN23192        --> GATAAAATGATGACCATCCTCAATTACAACAACTTCAACGTTTGGTACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905033       <-- GATAAAATGATGACCATCCTCAATTACAACAACCTCAACATTTGGTACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556380       <-- GATAAAATGATGACCACCCTCAATTACAATAACTTCAACGTTAGGTACAT  Raphanus raphanistrum subsp. landra
EX771900       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV536031       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566726       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV567335       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV538534       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569145       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX903393       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD962844       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY897474       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD559104       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD966160       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD961929       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV537475       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD986085       --> GATAAAATGATGACCACCCTCAATTACAACAACTTCAACGTTAGGTACAT  Raphanus raphanistrum subsp. landra
EX759403       --> GATAAAATGATGACCATCCTCAATTACAACAACCTCAACATTTGGTACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775973       --> GATAAAATGATGACCACCCTCAATTACAACAACTTCAACGTTAGGTACAT  Raphanus raphanistrum subsp. landra
FD554870       --> AATAAAATGATGACCACCCTCAATTACAACAACTTCAACGTTAGGTACAT  Raphanus raphanistrum subsp. landra
EV540565       --> GATAAAATGATGACCATCCTCAATTACGACAACCTCAACATTTGGTACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537911       --> GATAAAATGATGACCATCCTCAATTACAACAACCTCAACATTTGGTACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573738       --> GATAAAATGATGACCACCCTCAATTACAACAACTTCAACGTTAGGTACAT  Raphanus raphanistrum subsp. landra
EY902887       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967810       --> GATAAAATGATGACCATCCTCAATTACAACAACCTCAACATTTGGTACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968329       --> GATAAAATGATGACCATCCTCAATTACAACAACTTCAACGTTAGGTACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538234       --> GATAAAATGATGACCATCCTCAATTACAACAACTTCAACGTTAGGTACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966754       --> GATAAAATGATGACCATCCTCAATTACAACAACTTCAACGTTAGGTACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542521       --> GATAAAATGATGACCATCCTCAATTACAACAACCTCAACATTTGGTACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537505       --> GATAAAATGATGACCATCCTCAATTACAACAACCTCAACATTTGGTACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538369       --> GATAAAATGATGACCATCCTCAATTACAACAACTTCAACGTTAGGTACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541693       --> GATAAAATGATGACCATCCTCAATTACGACAACCTCAACATTTGGTACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759014       --> GATAAAATGATGACCATCCTCAATTACAACAACCTCAACATTTGGTACAT  Raphanus raphanistrum subsp. raphanistrum (MS)

               451    -    501
UN23192        --> GACTCTTGAACATCTCTCCCTTCACATACCCCATCGTTTCATTTGCTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905033       <-- GACTCTTGAACATCTCTCCCTTCACATACCCCATCGTTTCATTTGCTCCT
FD556380       <-- GACTCTTAAACATCTCTCCCTTCACATACCCCATCGTTTCATTTGCTCCT
EX771900       <-- ......................CACATACCC-ATCGTTTCATT-G-TC-T
EV536031       <-- ..................................................
EV566726       <-- ..................................................
EV567335       <-- ..................................................
EV538534       <-- ..................................................
EV569145       <-- ..................................................
EX903393       <-- ..................................................
FD962844       <-- ..................................................
EY897474       <-- ..................................................
FD559104       <-- ..................................................
FD966160       <-- ..................................................
FD961929       <-- ..................................................
EV537475       <-- ..................................................
FD986085       --> GACTCTTGAACATCTCTCCCTTCACATACCCCATCGTTTCATTTGCTCCT
EX759403       --> GACTCTTGAACATCTCTCCCTTCACATACCCCATCGTTTCATTTGCTCCT
EX775973       --> GACTCTTGAACATCTCTCCCTTCACATACCCCATCGTTTCATTTGCTCCT
FD554870       --> GACTCTTGAACATCTCTCCCTTCACATACCCCATCGTTTCATTTGCTCCT
EV540565       --> GACTCTTGAACATCTCTCCCTTCACATACCCCATCGTTTCATTTGCTCCT
FD537911       --> GACTCTTGAACATCTCTCCCTTCACATACCCCATCGTTTCATTTGCTCCT
EV573738       --> GACTCTTGAACATCTCTCCCTTCACATACCCCATCGTTTCATTTGCTCCT
EY902887       --> ..................................................
FD967810       --> GACTCTTGAACATCTCTCCCTTCACATACCCCATCGTTTCATTTGCTCCT
FD968329       --> GACTCTTGAACATCTCTCCCTTCACATACCCCATCGTTTCATTTGCTCCG
FD538234       --> GACTCTTGAACATCTCTCCCTTCACATACCCCATCGTTTCATTTGCTCCG
FD966754       --> GAATCTTGAACATCTCTCCCTTCACATACCCCATCGTTTCATTTGCTCCG
EV542521       --> GACTCTTGAACATCTCTCCCTTCACATACCCCATCGTTTCATTTGCTCCT
FD537505       --> GACTCTTGAACATCTCTCCCTTCACATACCCCATCGTTTCATTTGCTCCT
FD538369       --> GACTCTTGAACATCTCTCCCTTCACATACCCCATCGTTTCATTTGCTCCG
EV541693       --> GACTCTTGAACATCTCTCCCTTCACATACCCCATCGTTTCATTTGCTCCT
EX759014       --> GACTCTTGAACATCTCTCCCTTCACATACCCCATCGTTTCATTTGCTCCT

               501    -    551
UN23192        --> ATATCTTTGTCTCCGGCAATAAACTTTGTCGGAACAAGGATCTTGGAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905033       <-- ATATCTTTGTCTCCGGCAATAAACTTTGTCGGAACAAGGATCTTGGAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556380       <-- ATATCCTTGTCTCCGGCAATAAACTTTGTCGGAACAAGGATCTTGGAGCC  Raphanus raphanistrum subsp. landra
EX771900       <-- ATATC--TGTCTC-GGCA-TAA-CTT-GTCGGAACAAGGATCTTGGAGC-  Raphanus raphanistrum subsp. landra
EV536031       <-- ...................TAAACTTTGTCGGAACAAGGATCTTGGAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566726       <-- .......................CTTTGTCGGAACAAGGATCTTGGAGCC  Raphanus raphanistrum subsp. landra
EV567335       <-- .......................CTTTGTCGGAACAAGGATCTTGGAGCC  Raphanus raphanistrum subsp. landra
EV538534       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569145       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX903393       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD962844       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY897474       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD559104       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD966160       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD961929       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV537475       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD986085       --> ATATCCTTGTCTCCGGCAATAAACTTTGTCGGAACAAGGATCTTGGAGCC  Raphanus raphanistrum subsp. landra
EX759403       --> ATATCTTTGTCTCCGGCAATAAACTTTGTCGGAACAAGGATCTTGGAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775973       --> ATATCCTTGTCTCCGGCAATAAACTTTGTCGGAACAAGGATCTTGGAGCC  Raphanus raphanistrum subsp. landra
FD554870       --> ATATCCTTGTCTCCGGCAATAAACTTTGTCGGAACAAGGATCTTGGAGCC  Raphanus raphanistrum subsp. landra
EV540565       --> ATATCTTTGTCTCCGGCAATAAACTTTGTCGGAACAAGGATCTTGGAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537911       --> ATATCTTTGTCTCCGGCAATAAACTTTGTCGGAACAAGGATCTTGGAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573738       --> ATATCCTTGTCTCCGGCAATAAACTTTGTCGGAACAAGGATCTTGGAGCC  Raphanus raphanistrum subsp. landra
EY902887       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967810       --> ATATCTTTGTCTCCGGCAATAAACTTTGTCGGAACAAGGATCTTGGAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968329       --> ATATCTTTATCTCCGGCAATAAACTTTGTCGGAACAAGGATCTTGGAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538234       --> ATATCTTTATCTCTGGCAATAAACTTTGTCGGAACAAGGATCTTGGAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966754       --> ATATCTTTATCTCCGGCAATAAACTTTGTCGGAACAAGGATCTTGGAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542521       --> ATATCTTTGTCTCCGGCAATAAACTTTGTCGGAACAAGGATCTTGGAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537505       --> ATATCTTTGTCTCCGGCAATAAACTTTGTCGGAACAAGGATCTTGGAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538369       --> ATATCTTTATCTCCGGCAATAAACTTTGTCGGAACAAGGATCTTGGAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541693       --> ATATCTTTGTCTCCGGCAATAAACTTTGTCGGAACAAGGATCTTGGAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759014       --> ATATCTTTGTCTCCGGCAATAAACTTTGTCGGAACAAGGATCTTGGAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)

               551    -    601
UN23192        --> TTCCCACGGCGCCAATATCTCCCAGTTCAGATCCATGGCTCTGTAGTAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905033       <-- TTCCCACGGCGCCAATATCTCCCAGTTCAGATCCATGGCTCTGTAGTAAT
FD556380       <-- TTCCCACGGCGCCAATATCTCCCAATTCAGATCCATGGCTCTGTAGTAAT
EX771900       <-- TTCC-ACGGCGCCAATATCTCCCAAT-CAGATCCATG-CTCTGTAGTAAT
EV536031       <-- TTCCCACGGCGCCAATATCTCCCAGTTCAGATCCATGGCTCTGTAGTAAT
EV566726       <-- TTCCCACGGCGCCAATATCTCCCAATTCAGATCCATGGCTCTGTAGTAAT
EV567335       <-- TTCCCACGGCGCCAATATCTCCCAATTCAGATCCATGGCTCTGTAGTAAT
EV538534       <-- TTCCCACGGCGCCAATATCTCCCAGTTCAGATCCATGGCTCTGTAGTAAT
EV569145       <-- ...CCACGGCGCCAATATCTCCCAATTCAGATCCATGGCTCTGTAGTAAT
EX903393       <-- ..........................TCAGATCCATG-CTCTGTAGTAAT
FD962844       <-- ...........................CAGATCCATGGCTCTGTAGTAAT
EY897474       <-- ..................................................
FD559104       <-- ..................................................
FD966160       <-- ..................................................
FD961929       <-- ..................................................
EV537475       <-- ..................................................
FD986085       --> TTCCCACGGCGCCAATATCTCCCAATTCAGATCCATGGCTCTGTAGTAAT
EX759403       --> TTCCCACGGCGCCAATATCTCCCAGTTCAAATCCATGGCTCTGTAGTAAT
EX775973       --> TTCCCACGGCGCCAATATCTCCCAATTCAGATCCATGGCTCTGTAGTAAT
FD554870       --> TTCCCACGGCGCCAATATCTCCCAATTCAGATCCATGGCTCTGTAGTAAT
EV540565       --> TTCCCACGGCGCCAATATCTCCCAGTTCAGATCCATGGCTCTGTAGTAAT
FD537911       --> TTCCCACGGCGCCAATATCTCCCAATTCAGATCCATGGCTCTGTAGTAAT
EV573738       --> TTCCCACGGCGCCAATATCTCCCAATTCAGATCCATGGCTCTGTAGTAAT
EY902887       --> ..................................................
FD967810       --> TTCCCACGGCGCCAATATCTCCCAGTTCAGATCCATGGCTCTGTAGTAAT
FD968329       --> TTCCCACGGCGCCAATATCTCCCAGTTCAGATCCATGGCTCTGTAGTAAT
FD538234       --> TTCCCACGGCGCCAATATCTCCCAGTTCAGATCCATGGCTCTGTAGTAAT
FD966754       --> TTCCCACGGCGCCAATATCTCCCATTTC......................
EV542521       --> TTCCCACGGCGCCAATATCTCCCAGTTCAGATCCATGGCTCTGTAGTAAT
FD537505       --> TTCCCACGACGCCAATATCTCCCAGTTCAAATCCATGGCTCTGTAGTAAT
FD538369       --> TTCCCACGGCGCCAATATCTCCCAGTTCAGATCCATGGCTCTGTAGTAAT
EV541693       --> TTCCCACGGCGCCAATATCTCCCAGTTCAAATCCATGGCTCTGTAGTAAT
EX759014       --> TTCCCACGGCGCCAATATCTCCCAGTTCAAATCCATGGCTCTGTAGTAAT

               601    -    651
UN23192        --> TCAA-CGGTCCAGTGAATCC-AGATCTCTGAAACTTGTCTGCATAAACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905033       <-- TCAA-CGGGCCAGTGAATCC-AGATCTCTGAAACTTGTCTGCATAAACCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556380       <-- TCAA-CGGTCCAGTGAATTC-AGATCTCTGAAACTTGTCTGCATAAACCT  Raphanus raphanistrum subsp. landra
EX771900       <-- -CAA-CGGTCCAGTGAATCC-AGATCTCTGAAACT-GTCTGCATAAAC-T  Raphanus raphanistrum subsp. landra
EV536031       <-- TCAA-CGGGCCAGTGAATCC-AGATCTCTGAAACTTGTCTGCATAAACCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566726       <-- TCAAACGGTCCAGTGAATCC-AGATCTCTGAAACTTGTCTGCATAAACCT  Raphanus raphanistrum subsp. landra
EV567335       <-- TCAA-CGGTCCAGTGAATCC-AGATCTCTGAAACTTGTCTGCATAAACCT  Raphanus raphanistrum subsp. landra
EV538534       <-- TCAA-CGGGCCAGTGAATCC-AGATCTCTGAAACTTGTCTGCATAAACGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569145       <-- TCAA-CGGTCCAGTGAATCCCAGATCTCTGAAACTTGTCTGCATAAACCT  Raphanus raphanistrum subsp. landra
EX903393       <-- -CAA-CGGTCCAGTGA-TCC-AGATCTCTGAAACT-GTCTGCATAAAC-T  Raphanus sativus cv Rat-Tail Radish #3870
FD962844       <-- TCAA-CGGTCCAGTGAATCC-AGATCTCTGAAACT-GTCTGCATAAAC-T  Raphanus raphanistrum subsp. maritimus
EY897474       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD559104       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD966160       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD961929       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV537475       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD986085       --> TCAA-CGGTCCAGTGAATCC-AGATCTCTGAAACTTGTCTGCATAAACCT  Raphanus raphanistrum subsp. landra
EX759403       --> TCAA-CGGGCCAGTGAATCC-AGATCTCTGAAACTTGTCTGCATAAACCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775973       --> TCAA-CGGTCCAGTGAATCC-AGATCTCTGAAACTTGTCTGCATAAACCT  Raphanus raphanistrum subsp. landra
FD554870       --> TCAA-CGGTCCAGTGAATCC-AGATCTCTGAAACTTGTCTGCATAAACCT  Raphanus raphanistrum subsp. landra
EV540565       --> TCAA-CGGGCCAGTGAATCC-AGATCTCTGAAACTTGTCTGCATAAACCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537911       --> TCAA-CGGGCCAGTGAATCC-AGATCTCTGAAACTTGTCTGCATAAACCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573738       --> TCAA-CGGTCCAGTGAATCC-AGATCTCTGAAACTTGTCTGCATAAACCT  Raphanus raphanistrum subsp. landra
EY902887       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967810       --> TCAA-CGGGCCAGTGAATCC-AGATCTCTGAAACTTGTCTGCATAAACCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968329       --> TCAA-CGGACCAGTGAATCC-AGATCTCTGAAACTTGTCTGCATAAACCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538234       --> TCAA-CGGACCAGTGAATCC-AGATCTCTGAAACTTGTCTGCATAAACCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966754       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542521       --> TCAA-CGGGCCAGTGAATCC-AGATCTCTGAAACTTGTCTGCATAAACCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537505       --> TCAA-CGGGCCAGTGAATCC-AGATCTCTGAAACTTGTCTGCATAAACCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538369       --> TCAA-CGGACCAGTGAATCC-AGATCTCTGAAACTTGTCTGCATAAACCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541693       --> TCAA-CGGGCCAGTGAATCC-AGATCTCTGAAACTTGTCTGCATAAACCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759014       --> TCAA-CG...........................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               651    -    701
UN23192        --> GAATCTCCTCTTCTGTTATCCACTCTGGAATCTTCGTTGGAATCTCGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905033       <-- GAATCTCCTCTTCTGTTATCCACTCTGGAATCTTCGACGGAATCTCGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556380       <-- GAATCTCCTCTTCTGTTATCCACTCTGGAATCTTCGTTGGAATCTCGAGA  Raphanus raphanistrum subsp. landra
EX771900       <-- GAATCTCCTCTTCTGTTATCCACTCTGGAATCTTCGTTGGAATCTCGAGA  Raphanus raphanistrum subsp. landra
EV536031       <-- GAATCTCCTCTTCTGTTATCCACTCTGGAATCTTCGACGGAATCTCGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566726       <-- GAATCTCCTCTTCTGTTATCCACTCTGGAATCTTCGTTGGAATCTCGAGA  Raphanus raphanistrum subsp. landra
EV567335       <-- GAATCTACTCTTCTGTTATCCACTCTGGAATCTTCGTTGGAATCTCGAGA  Raphanus raphanistrum subsp. landra
EV538534       <-- GAATCTCCTCTTCTGTTATCCACTCTGGAATCTTCGACGGAATCTCGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569145       <-- GAATCTCCTCTTCTGTTATCCACTCTGGAATCTTCGTTGGAATCTCGAGA  Raphanus raphanistrum subsp. landra
EX903393       <-- GAATCTCCTCTTCTGTTATCCACTCTGGAATCTTCGTTGGAATCTCGAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD962844       <-- GAATCTCCTCTTCTGTTATCCACTCTGGAATCTTCGTTGGAATCTCGAGA  Raphanus raphanistrum subsp. maritimus
EY897474       <-- ..ATCTCCTCTTCTGTTATCCACTCTGGAATCTTCGTTGGAATCTCGAGA  Raphanus raphanistrum subsp. maritimus
FD559104       <-- ..............tgTATCCACTCTG-AATCTTCGTTGGAATCTCGAGA  Raphanus raphanistrum subsp. landra
FD966160       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD961929       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV537475       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD986085       --> GAATCTCCTCTTCTGTTATCCACTCTGGAATCTTCGTTGGAATCTCGAGA  Raphanus raphanistrum subsp. landra
EX759403       --> GAATCTCCTCTTCTGTTATCCACTCTGGAATCTTCGACGGAATCTCGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775973       --> GAATCTCCTCTTCTGTTATCCACTCTGGAATCTTCGTTGGAATCTCGAGA  Raphanus raphanistrum subsp. landra
FD554870       --> GAATCTCCTCTTCTGTTATCCACTCTG-AATCTTCGTTGGAATCTCGAGA  Raphanus raphanistrum subsp. landra
EV540565       --> GAATCTCCTCTTCTGTTATCCACTCTGGAATCTTCGACGGAATCTCGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537911       --> GAATCTCCTCTTCTGTTATCCACTCTGGAATCTTCGACGGAATCTCGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573738       --> GAATCTCCTCTTCTGTTATCCACTCTGGAATCTTCGTTGGAATCTCGAGA  Raphanus raphanistrum subsp. landra
EY902887       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967810       --> GAATCTCCTCTTCTGTTATCCACTCTGGAATCTTCGACGGAATCTCGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968329       --> GAATCTCCTCTTCTGTTATCCACTCTGGAATCTTCGGTGGAATCTCGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538234       --> GAATCTCCTCTTCTGTTATCCACTCTGGAATCTTCGGTGGAATCTCGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966754       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542521       --> GAATCTCCTCTTCTGTTATCCACTCTGGAATCTTCGACGGAATCTCGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537505       --> GAATCTCCTCTTCTGTTATCCACTCTGGAATCTTCGACGGAATCTCGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538369       --> GAATCTCCTCTTCTGTTATCCACTCTGGAATCTTCGGTGGAATCTCGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541693       --> GAATCTCCTCTTCTGTTATCCACTCTGGAATCTTCGACGGAATCTCGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759014       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               701    -    751
UN23192        --> TCATCGATGATCTCTGTACCGGGAGGAGCCACCATGAAATCTGTTCTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905033       <-- TCATCGATGATCTCTGTACCAGGAGGAGCCACCATGAAATCTGTTCTCGC
FD556380       <-- TCATCGATGATCTCTGTACCGGGAGGAGCCACCATGAAATCTGTTCTCGT
EX771900       <-- TCATCGATGATCTCTGTACCGGGAGGAGCCACCATGAAATCTGTTCTCGT
EV536031       <-- TCATCGATGATCTCTGTACCAGGAGGAGCCACCATGAAATCTGTTCTCGT
EV566726       <-- TCATCGATGATCTCTGTACCGGGAGGAGCCACCATGAAATCTGTTCTCGT
EV567335       <-- TCATCGATGATCTCTGTACCGGGAGGAGCCACCATGAAATCTGTTCTCGT
EV538534       <-- TCATCGATGATCCCTGTACCAGGAGGAGCCACCATGAAATCTGTTCTCGT
EV569145       <-- TCATCGATGATCTCTGTACCGGGAGGAGCCACCATGAAATCTGTTCTCGT
EX903393       <-- TCATCGATGATCTCTGTACCGGGAGGAGCCACCATGAAATCTGTTCTCGT
FD962844       <-- TCATCGATGATCTCTGTACCGGGAGGAGCCACCATGAAATCTGTTCTCGT
EY897474       <-- TCATCGATGATCTCTGTAACGGGAGGAGCCACCATGAAATCTGTTCTCGT
FD559104       <-- TCATCGATGATCTCTGTACCGGGAGGAGCCACCATGAAATCTGTTCTCGT
FD966160       <-- ..........TCTCTGTACCGGGAGGAGCCACCATGAAATCTGTTCTCGT
FD961929       <-- ..............TGTACCGGGAGGAGCCACCATGAAATCTGTTCTCGT
EV537475       <-- ..................................................
FD986085       --> TCATCGATGATCTCTGTACCGGGAGGAGCCACCATGAAATCTGTTCTCGT
EX759403       --> TCATCGATGATCTCTGTACCAGGAGGAGCCACCATGAAATCTGTTCTCGT
EX775973       --> TCATCGATGATCTCTGTACCGGGAGGAGCCACCATGAAATCTGTTCTCGT
FD554870       --> TCATCGATGATCTCTGTACCGGGAGGAGCCACCATGAAATCTGTTCTCGT
EV540565       --> TCATCGATGATCTCTGTACCAGGAGGAGCCACCATGAAATCTGTTCTCGT
FD537911       --> TCATCGATGATCTCTGTACCAGGAGGAGCCACCATGAAATCTGT......
EV573738       --> TCATCGATGATCTCTGTACCGGGAGGAGCCACCATGAAATCTGTTCTCGT
EY902887       --> ..................................................
FD967810       --> TCATCGATGATCTCTGTACCAGGAGGAGCCACCATGAAATCTGTTCTCGT
FD968329       --> TCATCGATGATCTCTGTACCGGGAGGAGCCACCATGAAATCTGTTCTCGT
FD538234       --> TCATCGATGATCTCTGTACCGGGAGGAGCCACCATGAAATCTGTTCTCGT
FD966754       --> ..................................................
EV542521       --> TCATCGATGATCCCTGTACCAGGAGGAGCCACCATGAAATCTGTTCTCGT
FD537505       --> TCATCGATGATCTCTGTACCAGGAGGAGCCACCATGAAATCTGTTCTCGT
FD538369       --> TCATCGATGATCTCTGTACCGGGAGGAGCCGCCATGAAATCTGTTCTCGT
EV541693       --> TCATCGATGATCTCTGTACCAGGAGGAGCCACCATGAAATCTGTTCTCGT
EX759014       --> ..................................................

               751    -    801
UN23192        --> CGTTAGCAAGAACTTCTTCATAACCGTCTTACAATCATGCTTGGCAAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905033       <-- CGTTAGCAAGAACTTCTTCATAACCGc.......................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556380       <-- CGTTAGCAAGAACTTCTTCATAACCGTCTTACAATCATGCTTGGCAAATG  Raphanus raphanistrum subsp. landra
EX771900       <-- CGTTAGCAAGAACTTCTTCATAAACGTCTTACAATCATGCTTGGCAAATG  Raphanus raphanistrum subsp. landra
EV536031       <-- CGTTAGCAAGAACTTCTTCATAACCGTCTTGCAATCATGCTTGGCAAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566726       <-- CGTTAGCAAGAACTTCTTCATAACCGTCTTACAATCATGCTTGGCAAATG  Raphanus raphanistrum subsp. landra
EV567335       <-- CGTTAGCAAGAACTTCTTCATAACCGTCTTACAATCATGCTTGGCAAATG  Raphanus raphanistrum subsp. landra
EV538534       <-- CGTTAGCAAGAACTTCTTCATAACCGTCTTGCAATCATGCTTGGCAAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569145       <-- CGTTAGCAAGAACTTCTTCATAACCGTCTTACAATCATGCTTGGCAAATG  Raphanus raphanistrum subsp. landra
EX903393       <-- CGTTAGCAAGAACTTCTTCATAACCGTCTTACAATCATGCTTGGCAAATG  Raphanus sativus cv Rat-Tail Radish #3870
FD962844       <-- CGTTAGCAAGAACTTCTTCATAACCGTCTTACAATCATGCTTGGCAAATG  Raphanus raphanistrum subsp. maritimus
EY897474       <-- CGTTAGCAAGAACTTCTTCATAACCGTCTTACAATCATGCTTGGCAAATG  Raphanus raphanistrum subsp. maritimus
FD559104       <-- CGTTAGCAAGAACTTCTTCATAACCGTCTTACAATCATGCTTGGCAAATG  Raphanus raphanistrum subsp. landra
FD966160       <-- CGTTAGCAAGAACTTCTTCATAACCGTCTTACAATCATGCTTGGCAAATG  Raphanus raphanistrum subsp. maritimus
FD961929       <-- CGTTAGCAAGAACTTCTTCATAACCGTCTTACAATCATGCTTGGCAAATG  Raphanus raphanistrum subsp. maritimus
EV537475       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD986085       --> CGTTAGCAAGAACTTCTTCATAACCGTCTTACAATCATGCTTG.......  Raphanus raphanistrum subsp. landra
EX759403       --> CGTTAGCAAGAACTTCTTCATAACCGTCTTGCAATCATGCTTGGCAAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775973       --> CGTTAGCAAGAACTTCTTCATAAACGTCTTACAATCATGCTTGGCAAATG  Raphanus raphanistrum subsp. landra
FD554870       --> CGTTAGCAAGAACTTCTTCATAACCGTCTTACAATCATGCTTGGCAAATG  Raphanus raphanistrum subsp. landra
EV540565       --> CGTTAGCAAGAACTTCTTCATAACCGTCTTGCAATCATGCTTGGCAAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537911       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573738       --> CGTTAGCAAGAACTTCTTCATAACCGTCTTACAATCATGCTTGGCAAATG  Raphanus raphanistrum subsp. landra
EY902887       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967810       --> CGTTAGCAAGAACTTCTTCATAACCGTCTTGCAATCATGCTTGGCAAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968329       --> TGTTAGCAAGAACTTCTTCATAACCGTCTTGCAATCATGCTTGGCAAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538234       --> TGTTAGCAAGAACTTCTTCATAACCGTCTTGCAATCATGCTTGGCAAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966754       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542521       --> CGTTAGCAAGAACTTCTTCATAACCGTCTTGCAATCATGCTTGGCAAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537505       --> CGTTAGCAAGAACTTCTTCATAACCGTCTTGCAATCATGCTTGGCAAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538369       --> TGTTAGCAAGAACTTCTTCATAACCGTCTTGCAATCATGCTTGGCAAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541693       --> CGTTAGCAAGAACTTCTTCATATCCGTCTTGCAATCATGCTTGGCAAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759014       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               801    -    851
UN23192        --> CAGCTTCAGCTCTTCCAGGTTTCTGAAACTGAGTGATGTATAACCCATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905033       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556380       <-- CAGCTTCAGCTCTTCCAGGTTTCTGAAACTGAGTGATGc...........  Raphanus raphanistrum subsp. landra
EX771900       <-- CAGCTTCAGCTCTTCCAGGTTTCTGAAACTGAGTGATGTATAACCCATCT  Raphanus raphanistrum subsp. landra
EV536031       <-- CAGCTTCAGCTCTTCCAGGTTTTTGAAACTGAGTGATGTATAGCCCATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566726       <-- CAGCTTCAGCTCTTCCAGGTTTCTGAAACTGAGTGATGTATAACCCATCT  Raphanus raphanistrum subsp. landra
EV567335       <-- CAGCTTCAGCTCTTCCAGGTTTCTGAAACTGAGTGATGTATAACCCATCT  Raphanus raphanistrum subsp. landra
EV538534       <-- CAGCTTCAGCTCTTCCAGGTTTTTGAAACTGAGTGATGTATAGCCCATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569145       <-- CAGCTTCAGCTCTTCCAGGTTTCTGAAACTGAGTGATGTATAACCCATCT  Raphanus raphanistrum subsp. landra
EX903393       <-- CAGCTTCAGCTCTTCCAGGTTTCTGAAACTGAGTGATGTATAACCCATCT  Raphanus sativus cv Rat-Tail Radish #3870
FD962844       <-- CAGCTTCAGCTCTTCCAGGTTTCTGAAACTGAGTGATGTATAACCCATCT  Raphanus raphanistrum subsp. maritimus
EY897474       <-- CAGCTTCAGCTCTTCCAGGTTTCTGAAACTGAGTGATGTATAACCCATCT  Raphanus raphanistrum subsp. maritimus
FD559104       <-- CAGCTTCAGCTCTTCCAGGTTTCTGAAACTGAGTGATGTATAACCCATCT  Raphanus raphanistrum subsp. landra
FD966160       <-- CAGCTTCAGCTCTTCCAGGTTTCTGAAACTGAGTGATGTATAACCCATCT  Raphanus raphanistrum subsp. maritimus
FD961929       <-- CAGCTTCAGCTCTTCCAGGTTTCTGAAACTGAGTGATGTATAACCCATCT  Raphanus raphanistrum subsp. maritimus
EV537475       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD986085       --> ..................................................  Raphanus raphanistrum subsp. landra
EX759403       --> CAGCTTCAGTTCTTCCAGGTTTTTGAAACTGAGTGATGTATA-GCCATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775973       --> CAGCTTCAGCTCTTCCAGGTTTCTGAAACTGAGTGATGTATA-CCCATCT  Raphanus raphanistrum subsp. landra
FD554870       --> CAGCTTCAGCTCTTCCAGGTTTCTGAAACTGAGTGATGTATAACCCATCT  Raphanus raphanistrum subsp. landra
EV540565       --> CAGCTTCAGCTCTTCCAGGTTTTTGAAACTGAGTGATGTATAGCCCATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537911       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573738       --> CAGCTTCAGCTCTTCCAGGTTTCTGAAACTGAGTGATGTATAACCCATCT  Raphanus raphanistrum subsp. landra
EY902887       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967810       --> CAGCTTCAGCTCTTCCAGGTTTTTGAAACTGAGTGATGTATAGCCCATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968329       --> CGGCCTCAGCTCT.....................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538234       --> CGGCCTCAGCTCTTCCAGGTTTCTGAAACTGAGTGATGTATAGCCCATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966754       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542521       --> CAGCTTCAGCTCTTCCAGGTTTTTGAAACTGAGTGATGTATAGCCCATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537505       --> CAGCTTCAGCTCTTCCAGGTTTTTGAAACTGAGTGAT.............  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538369       --> CGGCCTCAGCTCTTCCAGGTTTCTGAAACTGAGTGATGTATAGCCCATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541693       --> CAGCTTCAGCTCTTCCAGGTTTTTGAAACTGAGTGATGTATAGCCCATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759014       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               851    -    901
UN23192        --> CCAAAGGTTTTGGAAAACTCTGAAGGTTTGAGGTTTGGATCTCTTGGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905033       <-- ..................................................
FD556380       <-- ..................................................
EX771900       <-- CCAAAGGTTTTGGAAAACTCTGAAGGTTTGAGGTTTGGATCTCTTGGAGA
EV536031       <-- CCAAAGGTTTTGGAAAACTCTGAAGGTTTGAGGTTTGGATCTCTTGGAGA
EV566726       <-- CCAAAGGTTTTGGAAAACTCTGAAGGTTTGAGGTTTGGATCTCTTGGAGA
EV567335       <-- CCAAAGGTTTTGGAAAACTCTGAAGGTTTGAGGTTTGGATCTCTTGGAGA
EV538534       <-- CCAAAGGTTTTGGAAGACTCTGAAGGTTTGAGGTTTGGATCTCTTGGAGA
EV569145       <-- CCAAAGGTTTTGGAAAACTCTGAAGGTTTGAGGTTTGGATCTCTTGGAGA
EX903393       <-- CCAAAGGTTTTGGAAAACTCTGAAGGTTTGAGGTTTGGATCTCTTGGAGA
FD962844       <-- CCAAAGGTTTTGGAAAACTCTGAAGGTTTGAGGTTTGGATCTCTTGGAGA
EY897474       <-- CCAAAGGTTTTGGAAAACTCTGAAGGTTTGAGGTTTGGATCTCTTGGAGA
FD559104       <-- CCAAAGGTTTTGGAAAACTCTGAAGGTTTGAGGTTTGGATCTCTTGGAGA
FD966160       <-- CCAAAGGTTTTGGAAAACTCTGAAGGTTTGAGGTTTGGATCTCTTGGAGA
FD961929       <-- CCAAAGGTTTTGGAAAACTCTGAAGGTTTGAGGTTTGGATCTCTTGGAGA
EV537475       <-- ..................................................
FD986085       --> ..................................................
EX759403       --> C-AAA-GTTTTGGA....................................
EX775973       --> CCAAAG--TTTGGAAA-CTCTGAAG--TTGAGGTT-GGATCTCTTGGA..
FD554870       --> CC................................................
EV540565       --> CCAAAGGTTTTGGAAAACTCTGAAGGTTTGAGGTTTGGATCTCTTGGAGA
FD537911       --> ..................................................
EV573738       --> CCAAAGGTTTTGGAAAACTCTGAAGGTTTGAGGTTTGGATCTCTTGGAGA
EY902887       --> ..................................................
FD967810       --> CCAAAGGTTT........................................
FD968329       --> ..................................................
FD538234       --> CCAAAGGTTTTAGAAAACTCTGAAGGTTTGAGGTCTGGATCTCTTGGAGA
FD966754       --> ..................................................
EV542521       --> CCAAAGGTTTTGGAAGACTCTGAAGGTTTGAGGTTTGGATCTCTTGGAGA
FD537505       --> ..................................................
FD538369       --> CCAAAGGTTTTGGAAAACTCTGAAGGTTTGAGGTTTGGATCTCTTGGGGA
EV541693       --> CCAAAGGTTTTGGAAAACTCTGAAGGTTTGAGGTTTGGATCTCTTGGAGA
EX759014       --> ..................................................

               901    -    951
UN23192        --> ATACGGAACAGAGAGACTTATGAAACCTTTGACTCTGTCTGGTCTAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905033       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556380       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX771900       <-- ATACGGAACAGAGAGACTTATGAAACCTTTGACTCTGTCTGGTCTAAACA  Raphanus raphanistrum subsp. landra
EV536031       <-- ATATGGAACAGAGAGACTTATGAAACCTTTGACTCTGTCTGGTCTAAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566726       <-- ATACGGAACAGAGAGACTTATGAAACCTTTGACTCTGTCTGGTCTAAACA  Raphanus raphanistrum subsp. landra
EV567335       <-- ATACGGAACAGAGAGACTTATGAAACCTTTGACTCTGTCTGGTCTAAACA  Raphanus raphanistrum subsp. landra
EV538534       <-- ATATGGAACAGAGAGACTTATGAAACCTTTGACTCTGTCTGGTCTAAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569145       <-- ATACGGAACAGAGAGACTTATGAAACCTTTGACTCTGTCTGGTCTAAACA  Raphanus raphanistrum subsp. landra
EX903393       <-- ATACGGAACAGAGAGACTTATGAAACCTTTGACTCTGTCTGGTCTAAACA  Raphanus sativus cv Rat-Tail Radish #3870
FD962844       <-- ATACGGAACAGAGAGACTTATGAAACCTTTGACTCTGTCTGGTCTAAACA  Raphanus raphanistrum subsp. maritimus
EY897474       <-- ATACGGAACAGAGAGACTTATGAAACCTTTGACTCTGTCTGGTCTAAACA  Raphanus raphanistrum subsp. maritimus
FD559104       <-- ATACGGAACAGAGAGACTTATGAAACCTTTGACTCTGTCTGGTCTAAACA  Raphanus raphanistrum subsp. landra
FD966160       <-- ATACGGAACAGAGAGACTTATGAAACCTTTGACTCTGTCTGGTCTAAACA  Raphanus raphanistrum subsp. maritimus
FD961929       <-- ATACGGAACAGAGAGACTTATGAAACCTTTGACTCTGTCTGGTCTAAACA  Raphanus raphanistrum subsp. maritimus
EV537475       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD986085       --> ..................................................  Raphanus raphanistrum subsp. landra
EX759403       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775973       --> ..................................................  Raphanus raphanistrum subsp. landra
FD554870       --> ..................................................  Raphanus raphanistrum subsp. landra
EV540565       --> ATATGGAACAG.......................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537911       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573738       --> ATACGGAACAGAGAGACTTATGAAACCTTTGACTCTGTCTGGTCTAAACA  Raphanus raphanistrum subsp. landra
EY902887       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967810       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968329       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538234       --> ATATGGAACAGAGAGACTTATGAAACCTTTGACTCTGTCTGGTCTAA-CA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966754       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542521       --> ATATGGAACAGAGAGACTTATGAAACCTTTGACTCTGTCTGGTCTAAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537505       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538369       --> ATATGGAACAGA......................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV541693       --> ATATGGAA..........................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759014       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               951    -   1001
UN23192        --> AGCATAGAGACCAACCTATGACCGATCCCCAGTCATGTCCAGCCACAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905033       <-- ..................................................
FD556380       <-- ..................................................
EX771900       <-- AGCATAGAGACCAACCTATGACCGATCCCCAGTCATGTCCAGCCACAAAT
EV536031       <-- AGCATAGAGACCAACCTATAACTGATCCCCAGTCATGTCCAGCCACAAAT
EV566726       <-- AGCATAGAGACCAACCTATGACCGATCCCCAGTCATGTCCAGCCACAAAT
EV567335       <-- AGCATAGAGACCAACCTATGACCGATCCCCAGTCATGTCCAGCCACAAAT
EV538534       <-- AGCATAGAGACCAACCTATAACTGATCCCCAGTCATGTCCAGCCACAAAT
EV569145       <-- AGCATAGAGACCAACCTATGACCGATCCCCAGTCATGTCCAGCCACAAAT
EX903393       <-- AGCATAGAGACCAACCTATGACCGATCCCCAGTCATGTCCAGCCACAAAT
FD962844       <-- AGCATAGAGACCAACCTATGACCGATCCCCAGTCATGTCCAGCCACAAAT
EY897474       <-- AGCATAGAGACCAACCTATGACCGATCCCCAGTCATGTCCAGCCACAAAT
FD559104       <-- AGCATAGAGACCAACCTATGACCGATCCCCAGTCGTGTCCAGCCACAAAT
FD966160       <-- AGCATAGAGACCAACCTATGACCGATCCCCAGTCATGTCCAGCCACAAAT
FD961929       <-- AGCATAGAGACCAACCTATGACCGATCCCCAGTCATGTCCAGCCACAAAT
EV537475       <-- ..................................................
FD986085       --> ..................................................
EX759403       --> ..................................................
EX775973       --> ..................................................
FD554870       --> ..................................................
EV540565       --> ..................................................
FD537911       --> ..................................................
EV573738       --> AGCATAGAGACCAACCTATGACCGATCCCCAGTCATGTCCAGCCACAAAT
EY902887       --> ..................................................
FD967810       --> ..................................................
FD968329       --> ..................................................
FD538234       --> AGCATAGAGACCAACCTATaactga.........................
FD966754       --> ..................................................
EV542521       --> AGCATAGAGACCAACCTATAACTGATCCCCAGTCATGTCCAGCCACAAAT
FD537505       --> ..................................................
FD538369       --> ..................................................
EV541693       --> ..................................................
EX759014       --> ..................................................

               1001   -   1051
UN23192        --> GCCT----GAGCAGTGCCGTAGTGATCAAGCAAACCGATGGCATCAGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905033       <-- ..................................................
FD556380       <-- ..................................................
EX771900       <-- GCAT----GAGCAGTGCCGTAGTGACCAAGCAAACCGATGGCATCAGCGA
EV536031       <-- GCCT----GAGCAGTGCCGTAGTGATCAAGCAAACCGATGGCATCAGCGA
EV566726       <-- GCCT----GAGCAGTGCCGTAGTGATCAAGCAAACCGATGGCATCAGCGA
EV567335       <-- GCCT----GAGCAGTGCCGTAGTGATCAAGCAAACCGATGGCATCAGCGA
EV538534       <-- GCCT----GAGCAGTGCCGTAGTGATCAAGCAAACCGATGGCATCAGCGA
EV569145       <-- GCCT----GAGCAGTGCCGTAGTGATCAAGCAAACCGATGGCATCAGCGA
EX903393       <-- GCCTATCTGAGCAGTGCCGTAGTGATCAAGCAAACCGATGGCATCAGCGA
FD962844       <-- GCCT----GAGCAGTGCCGTAGTGATCAAGCAAACCGATGGCATCAGCGA
EY897474       <-- GCCT----GAGCAGTGCCGTAGTGATCAAGCAAACCGATGGCATCAGCGA
FD559104       <-- GCCT----GAGCAGTGCCGTAGTGATCAAGCAAACCGATGGCATCAGCGA
FD966160       <-- GCCT----GAGCAGTGCCGTAGTGATCAAGCAAACCGATGGCATCAGCGA
FD961929       <-- GCCT----GAGCAGTGCCGTAGTGATCAAGCAAACCGATGGCATCAGCGA
EV537475       <-- ..................................................
FD986085       --> ..................................................
EX759403       --> ..................................................
EX775973       --> ..................................................
FD554870       --> ..................................................
EV540565       --> ..................................................
FD537911       --> ..................................................
EV573738       --> GCCT----GAGCAGTGCCGTA.............................
EY902887       --> ..................................................
FD967810       --> ..................................................
FD968329       --> ..................................................
FD538234       --> ..................................................
FD966754       --> ..................................................
EV542521       --> GCCT----GAGCAGTGCCGTAGTGAT........................
FD537505       --> ..................................................
FD538369       --> ..................................................
EV541693       --> ..................................................
EX759014       --> ..................................................

               1051   -   1101
UN23192        --> CAAGGTGGCTGACAGTGTAAGACTCGTAGCTCGGAAGAAACTCGGAGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905033       <-- ..................................................
FD556380       <-- ..................................................
EX771900       <-- CAAGGTGGCTGACAGTGTAAGACTCGTAGCTCGGAAGAAACTCGGAGTCA
EV536031       <-- CAAGGTGGCTCACAGTGTAAGACTCGTAACTCGGAAGAAACTCGGAGTCG
EV566726       <-- CAAGGTGGCTGACAGTGTAAGACTCGTAGCTCGGAAGAAACTCGGAGTCA
EV567335       <-- CAAGGTGGCTGACAGTGTAAGACTCGTAGCTCGGAAGAAACTCGGAGTCA
EV538534       <-- CAAGGTGGCTCACAGTGTAAGACTCGTAACTCGGAAGAAACTCGGAGTCG
EV569145       <-- CAAGGTGGCTGACAGTGTAAGACTCGTAGCTCGGAAGGAACTCGGAGTCA
EX903393       <-- CAAGGTGGCTGACAGTGTAAGACTCGTAGCTCGGAAGAAACTCGGAGTCA
FD962844       <-- CAAGGTGGCTGACAGTGTAAGACTCGTAGCTCGGAAGAAACTCGGAGTCA
EY897474       <-- CAAGGTGGCTGACAGTGTAAGACTCGTAGCTCGGAAGAAACTCGGAGTCA
FD559104       <-- CAAGGTGGCTGACAGTGTAAGACTCGTAGCTCGGAAGAAACTCGGAGTCA
FD966160       <-- CAAGGTGGCTGACAGTGTAAGACTCGTAGCTCGGAAGAAACTCGGAGTCA
FD961929       <-- CAAGGTGGCTGACAGTGTAAGACTCGTAGCTCGGAAGAAACTCGGAGTCA
EV537475       <-- ..................................................
FD986085       --> ..................................................
EX759403       --> ..................................................
EX775973       --> ..................................................
FD554870       --> ..................................................
EV540565       --> ..................................................
FD537911       --> ..................................................
EV573738       --> ..................................................
EY902887       --> ..................................................
FD967810       --> ..................................................
FD968329       --> ..................................................
FD538234       --> ..................................................
FD966754       --> ..................................................
EV542521       --> ..................................................
FD537505       --> ..................................................
FD538369       --> ..................................................
EV541693       --> ..................................................
EX759014       --> ..................................................

               1101   -   1151
UN23192        --> CCGTAGCCTCTGAGATCTGGAGCGACCACGTGGTAGCCATGGCTAGACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905033       <-- ..................................................
FD556380       <-- ..................................................
EX771900       <-- CCGTAGCCTCTGAGATCTGGAGCGACCACGTGGTAGCCATGGCTAGACAA
EV536031       <-- CCGTAGCCTCTGAGGTCTGGAGCGACCACGTGGTAGCCATGGCTCGACAA
EV566726       <-- CCGTAGCCTCTGAGATCTGGAGCGACCACGTGGTAGCCATGGCTAGACAA
EV567335       <-- CCGTAGCCTCTGAGATCTGGAGCGACCACGTGGTAGCCATGGCTAGACAA
EV538534       <-- CCGTAGCCTCTGAGGTCTGGAGCGACCACGTGGTAGCCATGGCTCGACAA
EV569145       <-- CCGTAGCCTCTGAGATCTGGAGCGACCACGTGGTAGCCATGGCTAGACAA
EX903393       <-- CCGTAGCCTCTGAGATCTGGAGCGACCACGTGGTAGCCATGGCTAGACAA
FD962844       <-- CCGTAGCCTCTGAGATCTGGAGCGACCACGTGGTAGCCATGGCTAGACAA
EY897474       <-- CCGTAGCCTCTGAGATCTGGAGCGACCACGTGGTAGCCATGGCTAGACAA
FD559104       <-- CCGTAGCCTCTGAGATCTGGAGCGACCACGTGGTAGCCATGGCTAGACAA
FD966160       <-- CCGTAGCCTCTGAGATCTGGAGCGACCACGTGGTAGCCATGGCTAGATAA
FD961929       <-- CCGTAGCCTCTGAGATCTGGAGCGACCACGTGGTAGCCATGGCTAGACAA
EV537475       <-- ..............gTCTGGAGCGACCACGTGGTAGCCATGGCTCGACAA
FD986085       --> ..................................................
EX759403       --> ..................................................
EX775973       --> ..................................................
FD554870       --> ..................................................
EV540565       --> ..................................................
FD537911       --> ..................................................
EV573738       --> ..................................................
EY902887       --> ..................................................
FD967810       --> ..................................................
FD968329       --> ..................................................
FD538234       --> ..................................................
FD966754       --> ..................................................
EV542521       --> ..................................................
FD537505       --> ..................................................
FD538369       --> ..................................................
EV541693       --> ..................................................
EX759014       --> ..................................................

               1151   -   1201
UN23192        --> GAAATCGATCTGGTGACGCCACGAGAACCATGTCTCGGGGAAGCCATGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905033       <-- ..................................................
FD556380       <-- ..................................................
EX771900       <-- GAAATCGATCTGGTGACGCCACGAGAACCATGTCTCGGGGAAGCCATGAA
EV536031       <-- GAAATCGATCTGGTGACGCCACGAGAACCATGTCTCGGGGAAGCCATGGA
EV566726       <-- GAAATCGATCTGGTGACGCCACGAGAACCATGTCTCGGGGAAGCCATGAA
EV567335       <-- GAAATCGATCTGGTGACGCCACGAGAACCATGTCTCGGGGAAGCCATGAA
EV538534       <-- GAAATCGATCTGGTGACGCCACGAGAACCATGTCTCGGGGAAGCCATGGA
EV569145       <-- GAAATCGATCTGGTGACGCCACGAGAACCATGTCTCGGGGAAGCCATGAA
EX903393       <-- GAAATCGATCTGGTGACGCCACGAGAACCATGTCTCGGGGAAGCCATGAA
FD962844       <-- GAAATCGATCTGGTGACGCCACGAGAACCATGTCTCGGGGAAGCCATGAA
EY897474       <-- GAAATCGATCTGGTGACGCCACGAGAACCATGTCTCGGGGAAGCCATGAA
FD559104       <-- GAAATCGATCTGGTGACGCCACGAGAACCATGTCTCGGGGAAGCCATGAA
FD966160       <-- GAAATCGATCTGGTGACGCCACGAGAACCATGTCTCGGGGAAGCCATGAA
FD961929       <-- GAAATCGATCTGGTGACGCCACGAGAACCATGTCTCGGGGAAGCCATGAA
EV537475       <-- GAAATCAATCTGGTGACGCCACGAGAACCATGTCTCGGGGAAGCCATGGA
FD986085       --> ..................................................
EX759403       --> ..................................................
EX775973       --> ..................................................
FD554870       --> ..................................................
EV540565       --> ..................................................
FD537911       --> ..................................................
EV573738       --> ..................................................
EY902887       --> ..................................................
FD967810       --> ..................................................
FD968329       --> ..................................................
FD538234       --> ..................................................
FD966754       --> ..................................................
EV542521       --> ..................................................
FD537505       --> ..................................................
FD538369       --> ..................................................
EV541693       --> ..................................................
EX759014       --> ..................................................

               1201   -   1251
UN23192        --> GTAACAGAACCAAAGGTC-CTTCTTCGTCTCCTTTCTCAGCAACGTTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905033       <-- ..................................................
FD556380       <-- ..................................................
EX771900       <-- GTAACAGAACCAAAGGTC-CTTCTTCGTCTCCTTTCTCAGCAACGTTTAA
EV536031       <-- GTAACAGGACCAAAGGTC-CTCGTTCTTCTCCTTTCTCAGCAACGTTTAA
EV566726       <-- GTAACAGAACCAAAGGTC-CTTCTTCGTCTCCTTTCTCAGCAACGTTTAA
EV567335       <-- GTAACAGAACCAAAGGTC-CTTCTTCGTCTCCTTTCTCAGCAACGTTTAA
EV538534       <-- GTAACAGAACCAAAGGTC-CTCGTTCTTCTCCTTTCTCAGCAACGTTTAA
EV569145       <-- GTAACAGAACCAAAGGTC-CTTCTTCGTCTCCTTTCTCAGCAACGTTTAA
EX903393       <-- GTAACAGAACCAAAGGTC-CTTCTTCGTCTTCTTTCTCAGCAACGTTTAA
FD962844       <-- GTAACAGAACCAAAGGTCTCTTCTTCGTCTCCTTTCTCAGCAACGTTTAA
EY897474       <-- GTAACAGAACCAAAGGTC-CTTCTTCGTCTCCTTTCTCAGCAACGTTTAA
FD559104       <-- GTAACAGAACCAAAGGTC-CTTCTTCGTCTCCTTTCTCAGCAACGTTTAA
FD966160       <-- GTAACAGAACCAAAGGTC-CTTCTTCGTCTCCTTTCTCAGCAACGTTTAA
FD961929       <-- GTAACAGAACCAAAGGTC-CTTCTTCGTCTCCTTTCTCAGCAACGTTTAA
EV537475       <-- GTAACAGAACCAAAGGTC-CTCGTTCTTCTCCTTTCTCAGCAACGTTTAA
FD986085       --> ..................................................
EX759403       --> ..................................................
EX775973       --> ..................................................
FD554870       --> ..................................................
EV540565       --> ..................................................
FD537911       --> ..................................................
EV573738       --> ..................................................
EY902887       --> ..................................................
FD967810       --> ..................................................
FD968329       --> ..................................................
FD538234       --> ..................................................
FD966754       --> ..................................................
EV542521       --> ..................................................
FD537505       --> ..................................................
FD538369       --> ..................................................
EV541693       --> ..................................................
EX759014       --> ..................................................

               1251   -   1301
UN23192        --> CCAAATCCCGTTGGTCTTGAT-CTTCTTCTCTCTCACTAAGCTTGTTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905033       <-- ..................................................
FD556380       <-- ..................................................
EX771900       <-- CCAAATCCCGTTGGTCTTGAT-CTTCTTCTCTCTCACTAAGCTTGTTGTC
EV536031       <-- CCAAATCCCGTTGGTCTTGAT-CTTCTTCTCTCTCACTAAGCTTGTTGTC
EV566726       <-- CCAAATCCCGTTGGTCTTGAT-CTTCTTCTCTCTCACTAAGCTTGTTGTC
EV567335       <-- CCAAATCCCGTTGGTCTTGAT-CTTCTTCTCTCTCACTAAGCTTGTTGTC
EV538534       <-- CCAAATCCCGTTGGTCTTGAT-CTTCTTCTCTCTCACTAAGCTTGTTGTC
EV569145       <-- CCAAATCCCGTTGGTCTTGAT-CTTCTTCTCTCTCACTAAGCTTGTTGTC
EX903393       <-- CCAAATCCCGTTGGTCTTGAT-CTTCTTCTCTCTCACTAAGCTTGTTGTC
FD962844       <-- CCAAATCCCGTTGGTCTTGATACTTCTTCTCTCTCACTAAGCTTGTTGTC
EY897474       <-- CCAAATCCCGTTGGTCTTGAT-CTTCTTCTCTCTCACTAAGCTTGTTGTC
FD559104       <-- CCAAATCCCGTTGGTCTTGAT-CTTCTTCTCTCTCACTAAGCTTGTTGTC
FD966160       <-- CCAAATCCCGTTGGTCTTGAT-CTTCTTCTCTCTCACTAAGCTTGTTGTC
FD961929       <-- CCAAATCCCGTTGGTCTTGAT-CTTCTTCTCTCTCACTAAGCTTGTTGTC
EV537475       <-- CCAAATCCCGTTGGTCTTGAT-CTTCTTCTCTCTCACTAAGCTTGTTGTC
FD986085       --> ..................................................
EX759403       --> ..................................................
EX775973       --> ..................................................
FD554870       --> ..................................................
EV540565       --> ..................................................
FD537911       --> ..................................................
EV573738       --> ..................................................
EY902887       --> ..................................................
FD967810       --> ..................................................
FD968329       --> ..................................................
FD538234       --> ..................................................
FD966754       --> ..................................................
EV542521       --> ..................................................
FD537505       --> ..................................................
FD538369       --> ..................................................
EV541693       --> ..................................................
EX759014       --> ..................................................

               1301   -   1351
UN23192        --> ATGATTCTTGATCCTGATCC
                   ~~~~~~~~~~~~~~~~~~~~
EY905033       <-- ....................
FD556380       <-- ....................
EX771900       <-- ATGATTCTTGATatcc....
EV536031       <-- ATGATTCTTGATCCTGATCC
EV566726       <-- ATGATTCTTGATatcc....
EV567335       <-- ATGATTCTTcc.........
EV538534       <-- ATGATTCTTGATCCTGATCC
EV569145       <-- ATGATTCTTGATatcc....
EX903393       <-- ATGATTCTTGATatcc....
FD962844       <-- ATGATTCTTGATCCcct...
EY897474       <-- ATGATTCTTGATatcc....
FD559104       <-- ATGATTCTTGATatcc....
FD966160       <-- ATGATTCTTGATatcc....
FD961929       <-- ATGATTCTTGATCC......
EV537475       <-- ATGATTCTTGATCCTGATCC
FD986085       --> ....................
EX759403       --> ....................
EX775973       --> ....................
FD554870       --> ....................
EV540565       --> ....................
FD537911       --> ....................
EV573738       --> ....................
EY902887       --> ....................
FD967810       --> ....................
FD968329       --> ....................
FD538234       --> ....................
FD966754       --> ....................
EV542521       --> ....................
FD537505       --> ....................
FD538369       --> ....................
EV541693       --> ....................
EX759014       --> ....................