1      -     51
UN23217        --> GAAAATATTAAAACACAATTAATATAAATATAATTTGATTTATTACAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540108       <-- ..................................TTGATTTATTACAAAG
FD542479       <-- ..............................aatatattgattaTACAAAG
EW731325       <-- ..................................................
FD576507       <-- ..................................................
EV551463       <-- ..................................................
EV547806       <-- ..................................................
FD954938       <-- ..................................................
EX902300       <-- ..................................................
EY913173       <-- ..................................................
FD561493       <-- ..................................................
EX772932       <-- ..................................................
EY906549       <-- ..................................................
FD950182       <-- ..................................................
FD938773       <-- ..................................................
EW717917       <-- ..................................................
EX756931       <-- ..................................................
FD580991       --> GAAAATATTAAAACACAATTAATATAAATATAATTTGATTTATCACAAAG
EV543613       --> ...AATATTAAAACACAATTAATATAAATATAATTTGATTTATTACAAAG
EW735890       --> ......ataAAAACACAATTAATATAAATATAATTTGATTTATTACAAAG
EW736194       --> ......ataAAAACACAATTAATATAAATATAATTTGATTTATTACAAAG
EX906606       --> ......ataAAAACACAATTAATATAAATATAATTTGATTTATTACAAAG
FD951081       --> ......acaAAAACACAATTAATATAAATATAATTTGATTTATTACAAAG
EV546556       --> .........................AAATATAATTTGATTTATTACAAAG
EX760634       --> ..................................TTGATTTATTACAAAG
EX776783       --> ..................................TTGATTTATTACAAAG
FD538545       --> ..................................TTGATTTATTACAAAG
EX900075       --> ....................................GATTTATCACAAAG
EY919114       --> ....................................GATTTATTACAAAG
FD565644       --> ....................................GATTTATTACAAAG
FD945717       --> ....................................GATTTATCACAAAG
EY902702       --> ..................................................
EW728091       --> ..................................................
EY909455       --> ..................................................
EW737593       --> ..................................................

               51     -    101
UN23217        --> TAAACCAATGCATTATTTTTACACATTCTT-GTTTTAAGACGCCCACATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540108       <-- TAAACCAATGCATTATTTTTACACATTCTT-GTTTTAAGACGCCCACATT
FD542479       <-- TAA-CCAATGCATTATT--TACACAT-CT--GTTT-AAGACGCCCACATT
EW731325       <-- ...............................tgTTTAAGACGCCCACATT
FD576507       <-- ......................tacacattttaTTTAGGACGCCCACATT
EV551463       <-- ........................................CGCCCACATT
EV547806       <-- ..................................................
FD954938       <-- ..................................................
EX902300       <-- ..................................................
EY913173       <-- ..................................................
FD561493       <-- ..................................................
EX772932       <-- ..................................................
EY906549       <-- ..................................................
FD950182       <-- ..................................................
FD938773       <-- ..................................................
EW717917       <-- ..................................................
EX756931       <-- ..................................................
FD580991       --> TAAACCAATGCATTCTTTTTACACATTTTT-ATTTTAGGACGCCCACATT
EV543613       --> TAAACCAATGCATTATTTTTACACATTCTT-GTTTTAAGACGCCCACATT
EW735890       --> TAAACCAATGCATTATTTTTACACATTCTTAGTTTTAAGACGCCCACATT
EW736194       --> TAAACCAATGCATTATTTTTACACATTCTT-GTTTTAAGACGCCCACATT
EX906606       --> TAAACCAACGCATTATTTTTACACATTCTT-GTTTTAAAACGCCCACATT
FD951081       --> TAAACCAATGCATTATTTTTACACATTCTT-GTTTTAAGACGCCCACATT
EV546556       --> TAAACCAATGCATTATTTTTACACATTCTT-GTTTTAAGACGCCCACATT
EX760634       --> TAAACCAATGCATTATTTTTACACATTCTT-GTTTTAAGACGCCCACATT
EX776783       --> TAAACCAATGCATTATTTTTACACATTCTT-GTTTTAAGACGCCCACATT
FD538545       --> TAAACCAATGCATTATTTTTACACATTCTT-GTTTTAAGACGCCCACATT
EX900075       --> TAAACCAATGCATTCTTTTTACACATTTTT-ATTTTAGGACGCCCACATT
EY919114       --> TAAACCAATGCATTATTTTTACACATTCTT-GTTTTAAGACGTCCACATT
FD565644       --> TAAACCCATGCATTATTTTTACACATTCTT-GTTTTAAGACGCCCACATT
FD945717       --> TAAACCAATGCATTCTTTTTACACATTTTT-ATTTTAGGACGCCCACATT
EY902702       --> ....................................AAGACGCCCACATT
EW728091       --> ......................................GACGCCCACATT
EY909455       --> ..................................................
EW737593       --> ..................................................

               101    -    151
UN23217        --> CCTCATGGACTTGCACGCTTT-GAACTCAAATAAGAACAGAAAAACGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540108       <-- CCTCATGGACTTGCACGGTTT-GAACTCAAATAAGAACAGAAAAACGCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542479       <-- C-TCATGGACT-GCACGGTT--GA-CTCAAATAAGAACAGAAAA-CGCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731325       <-- CCTCATGGACTTGCACGCTTT-GAACTCAAATAAGAACAGAAAAACGCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD576507       <-- CCTCATGGACTTGCACGCTTT-GAACTCAAATAAGAACA-AAAAACGCAA  Raphanus sativus cv Rat-Tail Radish #3870
EV551463       <-- CCTCATGGACTTGCACGCTTT-GAACTCAAATGAGAACAGAAAAACGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547806       <-- ....ATGGACTTGCACGCTTT-GAACTCAAATGAGAACAGAAAAACGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD954938       <-- ........................ACTCAAATAAGAACAGAAAA-CGCAA  Raphanus sativus cv Rat-Tail Radish #3870
EX902300       <-- ..............................ATAAGAACAGAAAA-CGCAA  Raphanus sativus cv Rat-Tail Radish #3870
EY913173       <-- ..................................GAACA-AAAAACGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561493       <-- ..................................................  Raphanus sativus var. oleiformis
EX772932       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY906549       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD950182       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD938773       <-- ..................................................  Raphanus sativus var. oleiformis
EW717917       <-- ..................................................  Raphanus sativus var. oleiformis
EX756931       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD580991       --> CCTCATGGACTTGCACGCTTTTGAACTCAAATAAGAACAAAAAAACGCAA  Raphanus sativus cv Rat-Tail Radish #3870
EV543613       --> CCTCATGGACTTGCACGCTTT-GAACTCAAATGAGAACAGAAAAACGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW735890       --> CCTCATGGACTTGCACGCTTT-GAACTCAAATAAGAACAGAAAAACGCAA  Raphanus sativus cv Rat-Tail Radish #3870
EW736194       --> CCTCATGGACTTGCACGCTTT-GAACTCAAATAAGAACAGAAAAACGCAA  Raphanus sativus cv Rat-Tail Radish #3870
EX906606       --> CCTCATGGACTTGCACGCTTT-GAACTCAAATAAAAACAGAAAAACGCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD951081       --> CCTCATGGACTTGCACGCTTT-GAACTCAAATAAGAACAGAAAAACGCAA  Raphanus sativus cv Rat-Tail Radish #3870
EV546556       --> CCTCATGGACTTGCACGCTTT-GAACTCAAATGAGAACAGAAAAACGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760634       --> CCTCATGGACTTGCACGGTTT-GAACTCAAATAAGAACAGAAAAACGCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776783       --> CCTCATGGACTTGCACGCTTT-GAACTCAAATAAGAACGGAAAAACGCAA  Raphanus raphanistrum subsp. landra
FD538545       --> CCTCATGGACTTGCACGGTTT-GAACTCAAATAAAAACAGAAAAACGCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900075       --> CCTCATGGACTTGCACGCTTTTGAACTCAAATAAGAACAAAAAAACGCAA  Raphanus sativus cv Early Scarlet Globe
EY919114       --> CCTCATGGACTTGCACGCTTT-GAACTCAAATAAGAACAGAAAAACGCAA  Raphanus raphanistrum subsp. landra
FD565644       --> CCTCATGGACTTGCACGCTTT-GAACTCAAATAAGAACAGAAAAACGCAA  Raphanus sativus var. oleiformis
FD945717       --> CCTCATGGACTTGCACGCTTTTGAACTCAAATAAGAACAAAAAAACGCAA  Raphanus sativus cv Early Scarlet Globe
EY902702       --> CCTCATGGACTTGCACGCTTT-GAACTCAAATAAGAACAGAAAAACGCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW728091       --> CCTCATGGACTTGCACGCTTTTGAACTCAAATAAGAACAAAAAAACGCAA  Raphanus sativus cv Early Scarlet Globe
EY909455       --> ......................GAACTCAAATAAGAACAAAAAAACGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737593       --> ................................AAGAACAGAAAAACGCAA  Raphanus sativus cv Rat-Tail Radish #3870

               151    -    201
UN23217        --> AAGAGTTTACTACATGACCAGTTTGAGATCCTTT-CACTGACCAGTTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540108       <-- AAGAGTTTACTACATGACCAGTTTGAGATCCTTT-CACTGACCAGTTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542479       <-- AAGAGTTTACTACATGACCAGTTTGAGATC-TTT-CACTGACCAGTTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731325       <-- AAGAGTTTACTACATGACCAGTTTGAGATCCATT-CACTGACCAGTTTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD576507       <-- AAGAGTTTACTACATAACCAGTTTGAGATCCTTTTCACTGACCAGTTT-C  Raphanus sativus cv Rat-Tail Radish #3870
EV551463       <-- AAGAGTTTACTACATGACCAGTTTGAGATCCTTT-CACTGACCAGTTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547806       <-- AAGAGTTTACTACATGACCAGTTTGAGATCCTTT-CACTGACCAGTTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD954938       <-- AAGAGTTTACTACATGACCAGTTTGAGATC-TTT-CACTGACCAGTTTTG  Raphanus sativus cv Rat-Tail Radish #3870
EX902300       <-- AAGAGTTTACTACTTGACCAGTTTGAGATCCTTT-CACTGACCAGTTCTG  Raphanus sativus cv Rat-Tail Radish #3870
EY913173       <-- AAGAGTTTACTACATAACCAGTTTGAGATCCTTTTCACTGACCAGTTT-C  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561493       <-- ...............................................TTG  Raphanus sativus var. oleiformis
EX772932       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY906549       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD950182       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD938773       <-- ..................................................  Raphanus sativus var. oleiformis
EW717917       <-- ..................................................  Raphanus sativus var. oleiformis
EX756931       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD580991       --> AAGAGTTTACTACATAACCAGTTTGAGATCCTTTTCACTGACCAGTTT-C  Raphanus sativus cv Rat-Tail Radish #3870
EV543613       --> AAGAGTTTACTACATGACCAGTTTGAGATCCTTT-CACTGACCAGTTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW735890       --> AAGAGTTTACTACATGACCAGTTTGAGATCCATT-CACTGACCAGTTTTG  Raphanus sativus cv Rat-Tail Radish #3870
EW736194       --> AAGAGTTTACTACATGACCAGTTTGAGATCCATT-CACTGACCAGTTTTG  Raphanus sativus cv Rat-Tail Radish #3870
EX906606       --> AAAAGTTTACTACTTGACCAGTTTGAGATCCTTT-CACTGACCAGTTCTG  Raphanus sativus cv Rat-Tail Radish #3870
FD951081       --> AAGAGTTTACTACATGACCAGTTTGAGATCCTTT-CACTGACCAGTTTTG  Raphanus sativus cv Rat-Tail Radish #3870
EV546556       --> AAGAGTTTACTACATGACCAGTTTGAGATCCTTT-CACTGACCAGTTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760634       --> AAGAGTTTACTACATGACCAGTTTGAGATCCTTT-CACTGACCAGTTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776783       --> AAGAGTTTACTACATGACCAGTTTGAGATCCTTT-CACTGACCAGTTTTG  Raphanus raphanistrum subsp. landra
FD538545       --> AAGAGTTTACTACATGACCAGTTTGAGATCCTTT-CACTGACCAGTTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900075       --> AAGAGTTTACTACATAACCAGTTTGAGATCCTTTTCACTGACCAGTTT-C  Raphanus sativus cv Early Scarlet Globe
EY919114       --> AAGAGTTTACTACATGACCAGTTTGAGATCCTTT-CACTGACCAGTTTTG  Raphanus raphanistrum subsp. landra
FD565644       --> AAGAGTTTACTACATGACCAGTTTGAGATCCTTT-CACTGACCGGTTTTG  Raphanus sativus var. oleiformis
FD945717       --> AAGAGTTTACTACATAACCAGTTTGAGATCCTTTTCACTGACCAGTTT-C  Raphanus sativus cv Early Scarlet Globe
EY902702       --> AAGAGTTTACTACATGACCAGTTTGAGACCCTTT-CACTGACCAGTTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW728091       --> AAGAGTTTACTACATAACCAGTTTGAGATCCTTTTCACTGACCAGTTT-C  Raphanus sativus cv Early Scarlet Globe
EY909455       --> AAGAGTTTACTACATAACCAGTTTGAGATCCTTTTCACTGACCAGTTT-C  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737593       --> AAGAGTTTACTACATGACCAGTTTGAGATCCTTT-CACTGACCAGTTTTG  Raphanus sativus cv Rat-Tail Radish #3870

               201    -    251
UN23217        --> AACAACGCCTTAGTTCTAATTTCTTAACCATGTATGCATGCACAAGGGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540108       <-- AACAACGCCTTAGTTCTAATTTCTTAACCATGTATGCATGCACAAGGGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542479       <-- AACAACGCATTAGTTCTAATTTCTTAACCATGTATGCATGCACAAGGGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731325       <-- GACAACGCCTTAGTTCTAATTTCTTAACCATGTATGCATGCACAAGGGAC  Raphanus sativus cv Rat-Tail Radish #3870
FD576507       <-- AACAACGCCTTAGTTCTAATTTCTTAACCATGTATGCATGCACAACGGAC  Raphanus sativus cv Rat-Tail Radish #3870
EV551463       <-- AACAACGCCTTAGTTCTAATTTCTTAACCATGTATGCATGCACAAGGGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547806       <-- AACAACGC-TTAGTTGTAATTTCTTAACCATGTATGCATGCACAAGGGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD954938       <-- GACAACGCTTTAGTTCTAATTTCTTAACCATGTATGCATGCACAAGGGAC  Raphanus sativus cv Rat-Tail Radish #3870
EX902300       <-- GACAACGC-TTAGTTCTAATTTCTTAACCATGTATGCATGCACAAGGGAC  Raphanus sativus cv Rat-Tail Radish #3870
EY913173       <-- AACAACGC-TTAGTTCTAATTTCTTAACCATGTATACATGCACAACGGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561493       <-- GACAACGCTTTAGTTCTAATTTCTTAACCATGTATGCATGCACAAGGGAC  Raphanus sativus var. oleiformis
EX772932       <-- ............GTTCTAATTTCTTAACCATGTATGCATGCACAAGGGAC  Raphanus raphanistrum subsp. landra
EY906549       <-- ..............TCTAATTTCTTAACCATGTATGCATGCACAAGGGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD950182       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD938773       <-- ..................................................  Raphanus sativus var. oleiformis
EW717917       <-- ..................................................  Raphanus sativus var. oleiformis
EX756931       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD580991       --> AACAACGCCTTAGTTCTAATTTCTTAACCATGTATGCATGCACAACGGAC  Raphanus sativus cv Rat-Tail Radish #3870
EV543613       --> AACAACGCCTTAGTTCTAATTTCTTAACCATGTATGCATGCACAAGGGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW735890       --> GACAACGCCTTAGTTCTAATTTCTTAACCATGTATGCATGCACAAGGGAC  Raphanus sativus cv Rat-Tail Radish #3870
EW736194       --> GACAACGCCTTAGTTCTAATTTCTTAACCATGTATGCATGCACAAGGGAC  Raphanus sativus cv Rat-Tail Radish #3870
EX906606       --> GACAACGCCTTAGTTCTAATTTCTTAACCATGTATGCATGCACAAGGGAC  Raphanus sativus cv Rat-Tail Radish #3870
FD951081       --> GACAACGCCTTAGTTCTAATTTCTTAACCATGTATGCATGCACAAGGGAC  Raphanus sativus cv Rat-Tail Radish #3870
EV546556       --> AACAACGCCTTAGTTCTAATTTCTTAACCATGTATGCATGCACAAGGGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760634       --> AACAACGCCTTAGTTCTAATTTCTTAACCATGTATGCATGCACAAGGGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776783       --> GACAACGCCTTAGTTCTAATTTCTTAACCATGTATGCATGCACAAGGGAC  Raphanus raphanistrum subsp. landra
FD538545       --> AACAACGCCTTAGTTCTAATTTCTTAACCATGTATGCATGCACAAGGGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900075       --> AACAACGCCTTAGTTCTAATTTCTTAACCATGTATGCATGCACAACGGAC  Raphanus sativus cv Early Scarlet Globe
EY919114       --> GACAACGCCTTAGTTCTAATTTCTTAACCCTGTATGCATGCACAAGGGAC  Raphanus raphanistrum subsp. landra
FD565644       --> GACAACGCCTTAGTTCTAATTTCTTAACCATGTATGCATGCACAAGGGAC  Raphanus sativus var. oleiformis
FD945717       --> AACAACGCCTTAGTTCTAATTTCTTAACCATGTATGCATGCACAACGGAC  Raphanus sativus cv Early Scarlet Globe
EY902702       --> AACAACGCCTTAGTTCTAATTTCTTAACCATGTATGCATGCACAAGGGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW728091       --> AACAACGCCTTAGTTCTAATTTCTTAACCATGTATGCATGCACAACGGAC  Raphanus sativus cv Early Scarlet Globe
EY909455       --> AACAACGCCTTAGTTCTAATTTCTTAACCATGTATACATGCACAACGGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737593       --> GACAACGCCTTAGTTCTAATTTCTTAGCCCTGTATGCATGCACAAGGGAC  Raphanus sativus cv Rat-Tail Radish #3870

               251    -    301
UN23217        --> TAAGGATGGGGTCGATGGCCTTAAATACCCTTTGAACCGGGAACCTCGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540108       <-- TAAGGATGGGGTCGATGGCCTTAAATACCCTTTGAACCGGGAACCTCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542479       <-- TAAGGATGGGGTCGATGGCCTTAAATACCCTT-GAACCGGGAACCTCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731325       <-- TAAGGATGGGGTCGATGGCCTTAAATACCCTTTGAACCGGGAACCTCGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD576507       <-- TAAGGATGGGATCGATGGCCTTATATCCCCTTTGAACCGGGAACCTCGAT  Raphanus sativus cv Rat-Tail Radish #3870
EV551463       <-- TAAGGATGGGGTCGATGGCCTTAAATACCCTTTGAACCGGGAACCTCGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547806       <-- TAAGGATGGGGTCGATGGCCTTAAATACCCTTTGAACCGGGAACCTCGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD954938       <-- TAAGGATGGGGTCGATGGCTTTAAATACCCTTTGAACCGGGAACCTCGAT  Raphanus sativus cv Rat-Tail Radish #3870
EX902300       <-- TAAGGATGGGGTCGATGGCCTTAAATACCCTTTGAACCGGGAACCTCGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY913173       <-- TAAGGATGGGATCGATGGCCTTATATCCCCTTTGAACCGGGAACCTCGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561493       <-- TAAGGATGGGGTCGATGGCTTTAAATACCCTTTGAACCGGGAACCCCGAT  Raphanus sativus var. oleiformis
EX772932       <-- TAAGGATGGGGTCGATGGCCTTAAATACCCTTTGAACCGGGAACCTCGAT  Raphanus raphanistrum subsp. landra
EY906549       <-- TAAGGATGGGGCCGATGGCCTTAAATACCCTTTGAACCGGGAACC-CGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD950182       <-- .......................tatcCCCTTTGAACCGGGAACCTCGAT  Raphanus sativus cv Early Scarlet Globe
FD938773       <-- .................................GAACCGGGAACCTCGAT  Raphanus sativus var. oleiformis
EW717917       <-- ..................................................  Raphanus sativus var. oleiformis
EX756931       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD580991       --> TAAGGATGGGATCGATGGCCTTATATCCCCTTTGAACCGGGAACCTCGAT  Raphanus sativus cv Rat-Tail Radish #3870
EV543613       --> TAAGGATGGGGTCGATGGCCTTAAATACCCTTTGAACCGGGAACCTCGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW735890       --> TAAGGATGGGGTCGATGGCCTTAAATACCCTTTGAACCGGGAACCTCGAT  Raphanus sativus cv Rat-Tail Radish #3870
EW736194       --> TAAGGATGGGGTCGATGGCCTTAAATACCCTTTGAACCGGGAACCTCGAT  Raphanus sativus cv Rat-Tail Radish #3870
EX906606       --> TAAGGATGGGGTCGATGGCCTTAAATACCCTTTGAACCGGGAACCTCGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD951081       --> TAAGGATGGGGTCGATGGCCTTAAATACCCTTTGAACCGGGAACCTCGAT  Raphanus sativus cv Rat-Tail Radish #3870
EV546556       --> TAAGGATGGGGTCGATGGCCTTAAATACCCTTTGAACCGGGAACCTCGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760634       --> TAAGGATGGGGTCGATGGCCTTAAATACCCTTTGAACCGGGAACCTCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776783       --> TAAGGATGGGGTCGATGGCCTTAAATACCCTTTGAACCGGGAACCTCGAT  Raphanus raphanistrum subsp. landra
FD538545       --> TAAGGATGGGGTCGATGGCCTTAAATACCCTTTGAACCGGGAACCTCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900075       --> TAAGGATGGGATCGATGGCCTTATATCCCCTTTGAACCGGGAACCTCGAT  Raphanus sativus cv Early Scarlet Globe
EY919114       --> TAAGGATGGGGTCGATGGCCTTAAATACCCTTCGAACCGGGAACCTCGAT  Raphanus raphanistrum subsp. landra
FD565644       --> TAAGGATGGGGTCGATGGCCTTAAATACCCTTTGAACCGGGAACCCCGAT  Raphanus sativus var. oleiformis
FD945717       --> TAAGGATGGGATCGATGGCCTTATATCCCCTTTGAACCGGGAACCTCGAT  Raphanus sativus cv Early Scarlet Globe
EY902702       --> TAAGGATGGGGCCGATGGCCTTAAATACCCTTTGAACCGGGAACC-CGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW728091       --> TAAGGATGGGATCGATGGCCTTATATCCCCTTTGAACCGGGAACCTCGAT  Raphanus sativus cv Early Scarlet Globe
EY909455       --> TAAGGATGGGATCGATGGCCTTATATCCCCTTTGAACCGGGAACCTCGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737593       --> TAAGGATGGGGTCGATGGCCTTAAATACCCTTTGAACCGGGAACCTCGAT  Raphanus sativus cv Rat-Tail Radish #3870

               301    -    351
UN23217        --> CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACGTGCTGGAGTCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540108       <-- CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACGTGCTGGAGTCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542479       <-- CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACGTGCTGGAGTCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731325       <-- CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACGTGCTGGAGTCTAA  Raphanus sativus cv Rat-Tail Radish #3870
FD576507       <-- CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACATTCTGGAGTCTAA  Raphanus sativus cv Rat-Tail Radish #3870
EV551463       <-- CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACGTGCTGGAGTCTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547806       <-- CCACTCGAGCTGTAGCTCGACCTCTCCACGCTCCACGTGCTGGAGTCTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD954938       <-- CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACGTGCTGGAGTCTAA  Raphanus sativus cv Rat-Tail Radish #3870
EX902300       <-- CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACGTGCTGGAGTCTAA  Raphanus sativus cv Rat-Tail Radish #3870
EY913173       <-- CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACATTCTGGAGTCTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561493       <-- CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACGTGCTGGAGTCTAA  Raphanus sativus var. oleiformis
EX772932       <-- CCACTCGAGCTGTAGCTCGACCTCTCCACCCTCCACGTGCTGGAGTCTAA  Raphanus raphanistrum subsp. landra
EY906549       <-- CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACGTGCTGGAGTCTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD950182       <-- CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACATTCTGGAGTCTAA  Raphanus sativus cv Early Scarlet Globe
FD938773       <-- CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACATTCTGGAGTCTAA  Raphanus sativus var. oleiformis
EW717917       <-- ................................CCACGTGCTGGAGTCTAA  Raphanus sativus var. oleiformis
EX756931       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD580991       --> CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACATTCTGGAGTCTAA  Raphanus sativus cv Rat-Tail Radish #3870
EV543613       --> CCACTCGAGCTGTAGCTCGACCTCTCCACGCTCCACGTGCTGGAGTCTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW735890       --> CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACGTGCTGGAGTCTAA  Raphanus sativus cv Rat-Tail Radish #3870
EW736194       --> CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACGTGCTGGAGTCTAA  Raphanus sativus cv Rat-Tail Radish #3870
EX906606       --> CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACGTGCTGGAGTCTAA  Raphanus sativus cv Rat-Tail Radish #3870
FD951081       --> CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACGTGCTGGAGTCTAA  Raphanus sativus cv Rat-Tail Radish #3870
EV546556       --> CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACGTGCTGGAGTCTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760634       --> CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACGTGCTGGAGTCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776783       --> CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACGTGCTGGAGTCTAA  Raphanus raphanistrum subsp. landra
FD538545       --> CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACGTGCTGGAGTCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900075       --> CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACATTCTGGAGTCTAA  Raphanus sativus cv Early Scarlet Globe
EY919114       --> CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACGTGCTGGAGTCTAA  Raphanus raphanistrum subsp. landra
FD565644       --> CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACGTGCTGGAGTCTAA  Raphanus sativus var. oleiformis
FD945717       --> CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACATTCTGGAGTCTAA  Raphanus sativus cv Early Scarlet Globe
EY902702       --> CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACGTGCTGGAGTCTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW728091       --> CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACATTCTGGAGTCTAA  Raphanus sativus cv Early Scarlet Globe
EY909455       --> CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACATTCTGGAGTCTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737593       --> CCACTCGAGCTGTAGCTCGACCTCTCCACACTCCACGTGCTGGAGTCTAA  Raphanus sativus cv Rat-Tail Radish #3870

               351    -    401
UN23217        --> GGAACATATTCTGCACAAGCTTCCCTTGGCTCAACACAATATGGCTCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540108       <-- GGAACATATTCTGCACAAGCTTCCCTTGGCTCAACACAATATGGCTCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542479       <-- GGAACATATTCTGCACAAGCTTCCCTTGGCTCAACACAATATGGCTCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731325       <-- GGAACATATTCTGCACAAGCTTGCCTTGGCTCAACACAATATGGCTCTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD576507       <-- GGAACATATTCTGCACAAGCTTCCCTTGGCTCAACACAATATGGCTCTCT  Raphanus sativus cv Rat-Tail Radish #3870
EV551463       <-- GGAACATATTCTGCACAAGCTTCCCTTGGCTCAACACAATATGGCTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547806       <-- GGAACATATTCTGCACAAGCTTCCCTTGGCTCAACACAATATGGCTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD954938       <-- GGAACATATTCTGCACAAGCTTGCCTTGGCTCAACACAATATGGCTCTCT  Raphanus sativus cv Rat-Tail Radish #3870
EX902300       <-- GGAACATATTCTGCACAAGCTTGCCTTGGCTCAACTCAATATGGCTCTCT  Raphanus sativus cv Rat-Tail Radish #3870
EY913173       <-- GGAACATATTCTGCACAAGCTTCCCTTGGCTCAACACAATATGGCTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561493       <-- GGAACATATTCTGCACAAGCTTGCCTTGGCTCAACACAATATGGCTCTCT  Raphanus sativus var. oleiformis
EX772932       <-- GGAACATATTCTGCACAAGCTTGCCTTGGCTCAACACAATATGGCTCTCT  Raphanus raphanistrum subsp. landra
EY906549       <-- GGAACATATTCTGCACAAGCTTCCCTTGGCTCAACACAATATGGCTCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD950182       <-- GGAACATATTCTGCACAAGCTTCCCTTGGCTCAACACAATATGGCTCTCT  Raphanus sativus cv Early Scarlet Globe
FD938773       <-- GGAACATATTCTGCACAAGCTTCCCTTGGCTCAACACAATATGGCTCTCT  Raphanus sativus var. oleiformis
EW717917       <-- GGAACATATTCTGCACAAGCTTCCCTTGGCTCGACACAATATGGCTCTCT  Raphanus sativus var. oleiformis
EX756931       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD580991       --> GGAACATATTCTGCACAAGCTTCCCTTGGCTCAACACAATATGGCTCTCT  Raphanus sativus cv Rat-Tail Radish #3870
EV543613       --> GGAACATATTCTGCACAAGCTTCCCTTGGCTCAACACAATATGGCTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW735890       --> GGAACATATTCTGCACAAGCTTGCCTTGGCTCAACACAATATGGCTCTCT  Raphanus sativus cv Rat-Tail Radish #3870
EW736194       --> GGAACATATTCTGCACAAGCTTGCCTTGGCTCAACACAATATGGCTCTCT  Raphanus sativus cv Rat-Tail Radish #3870
EX906606       --> GGAACATATTCTGCACAAGCTTGCCTTGGCTCAACTCAATATGGCTCTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD951081       --> GGAACATATTCTGCACAAGCTTGCCTTGGCTCAACACAATATGGCTCTCT  Raphanus sativus cv Rat-Tail Radish #3870
EV546556       --> GGAACATATTCTGCACAAGCTTCCCTTGGCTCAACACAATATGGCTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760634       --> GGAACATATTCTGCACAAGCTTCCCTTGGCTCAACACAATATGGCTCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776783       --> GGAACATATTCTGCACAAGCTTGCCTTGGCTCAACACAATATGGCTCTCT  Raphanus raphanistrum subsp. landra
FD538545       --> GGAACATATTCTGCACAAGCTTCCCTTGGCTCAACACAATATGGCTCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900075       --> GGAACATATTCTGCACAAGCTTCCCTTGGCTCAACACAATATGGCTCTCT  Raphanus sativus cv Early Scarlet Globe
EY919114       --> GGAACATATTCTGCACAAGCTTGCCTTGGCTCAACACAATATGGCTCTCT  Raphanus raphanistrum subsp. landra
FD565644       --> GGAACATATTCTGCACAAGCTTGCCTTGGCTCAACACAATATGGCTCTCT  Raphanus sativus var. oleiformis
FD945717       --> GGAACATATTCTGCACAAGCTTCCCTTGGCTCAACACAATATGGCTCTCT  Raphanus sativus cv Early Scarlet Globe
EY902702       --> GGAACATATTCTGCACAAGCTTCCCTTGGCTCAACACAATATGGCTCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW728091       --> GGAACATATTCTGCACAAGCTTCCCTTGGCTCAACACAATATGGCTCTCT  Raphanus sativus cv Early Scarlet Globe
EY909455       --> GGAACATATTCTGCACAAGCTTCCCTTGGCTCAACACAATATGGCTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737593       --> GGAACATATTCTGCACAAGCTTGCCTTGGCTCAACACAATATGGCTCTCT  Raphanus sativus cv Rat-Tail Radish #3870

               401    -    451
UN23217        --> TCAGACAAACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540108       <-- TCAGACAGACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542479       <-- TCAGACAGACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731325       <-- TCAGACAAACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus sativus cv Rat-Tail Radish #3870
FD576507       <-- TCAGACAAACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus sativus cv Rat-Tail Radish #3870
EV551463       <-- TCAGACAAACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547806       <-- TCAGACAAACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD954938       <-- TCAGACAAACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus sativus cv Rat-Tail Radish #3870
EX902300       <-- TCAGACAAACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus sativus cv Rat-Tail Radish #3870
EY913173       <-- TCAGACAAACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561493       <-- TCAGACAAACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus sativus var. oleiformis
EX772932       <-- TCAGACAAACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus raphanistrum subsp. landra
EY906549       <-- TCAGACAGACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD950182       <-- TCAGACAAACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus sativus cv Early Scarlet Globe
FD938773       <-- TCAGACAAACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus sativus var. oleiformis
EW717917       <-- TCAGACAGACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus sativus var. oleiformis
EX756931       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD580991       --> TCAAACAAACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus sativus cv Rat-Tail Radish #3870
EV543613       --> TCAGACAAACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW735890       --> TCAGACAAACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus sativus cv Rat-Tail Radish #3870
EW736194       --> TCAGACAAACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus sativus cv Rat-Tail Radish #3870
EX906606       --> TCAGACAAACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus sativus cv Rat-Tail Radish #3870
FD951081       --> TCAGACAAACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus sativus cv Rat-Tail Radish #3870
EV546556       --> TCAAACAAACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760634       --> TCAGACAGACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776783       --> TCAAACAAACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus raphanistrum subsp. landra
FD538545       --> TCAAACAGACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900075       --> TCAGACAAACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus sativus cv Early Scarlet Globe
EY919114       --> TCAAACAGA-AGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus raphanistrum subsp. landra
FD565644       --> TCAGACAAACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus sativus var. oleiformis
FD945717       --> TCAGACAAACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus sativus cv Early Scarlet Globe
EY902702       --> TCAGACAGACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW728091       --> TCAAACAAACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus sativus cv Early Scarlet Globe
EY909455       --> TCAGACAAACAGTTTTGTCTGGTCGGTTGTACCTTCATGATTATGGTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737593       --> TCAGACAGACAGTTTTGTCTGGTCGGTTGTACCTTCATGACTATGGTTCC  Raphanus sativus cv Rat-Tail Radish #3870

               451    -    501
UN23217        --> GTTGGGAAGTCCACCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540108       <-- GTTGGGAAGTCCTCCTTCAAGCTTATGGCGTAGc................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542479       <-- GTTGGGAAGTCCTCCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731325       <-- GTTGGGAAGTCCACCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD576507       <-- GTTGGGAAGTCCACCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus sativus cv Rat-Tail Radish #3870
EV551463       <-- GTTGGGAAGTCCTCCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547806       <-- GTTGGGAAGTCCTCCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD954938       <-- GTTGGGAAGTCCACCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus sativus cv Rat-Tail Radish #3870
EX902300       <-- GTTGGGAAGTCCACCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY913173       <-- GTTGGGAAGTCCACCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561493       <-- GTTGGGAAGTCCACCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus sativus var. oleiformis
EX772932       <-- GTTGGGAAGTCCACCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus raphanistrum subsp. landra
EY906549       <-- GTTGGGAAGTCCTCCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD950182       <-- GTTGGGAAGTCCACCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus sativus cv Early Scarlet Globe
FD938773       <-- GTTGGGAAGTCCACCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus sativus var. oleiformis
EW717917       <-- GTTGGGAAGTCCTCCTTCAAGCTTATGACGTAGTTTAATGGCTTCAAGAT  Raphanus sativus var. oleiformis
EX756931       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD580991       --> GTTGGGAAGTCCACCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus sativus cv Rat-Tail Radish #3870
EV543613       --> GTTGGGAAGTCCTCCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW735890       --> GTTGGGAAGTCCACCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus sativus cv Rat-Tail Radish #3870
EW736194       --> GTTGGGAAGTCCACCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus sativus cv Rat-Tail Radish #3870
EX906606       --> GTTGGGAAGTCCACCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD951081       --> GTTGGGAAGTCCACCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus sativus cv Rat-Tail Radish #3870
EV546556       --> GTTGGGAAGTCCTCCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760634       --> GTTGGGAAGTCCTCCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776783       --> GTTGGGAAGTCCACCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus raphanistrum subsp. landra
FD538545       --> GTTGGGAAGTCCTCCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900075       --> GTTGGGAAGTCCACCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus sativus cv Early Scarlet Globe
EY919114       --> GTTGGGAAGTCCTCCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus raphanistrum subsp. landra
FD565644       --> GTTGGGAAGTCCACCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus sativus var. oleiformis
FD945717       --> GTTGGGAAGTCCACCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus sativus cv Early Scarlet Globe
EY902702       --> GTTGGGAAGTCCTCCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW728091       --> GTTGGGAAGTCCACCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus sativus cv Early Scarlet Globe
EY909455       --> GTTGGGAAGTCCACCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737593       --> GTTGGGAAGTCCTCCTTCAAGCTTATGGCGTAGTTTAATGGCTTCAAGAT  Raphanus sativus cv Rat-Tail Radish #3870

               501    -    551
UN23217        --> ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATCCGCCGAGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540108       <-- ..................................................
FD542479       <-- ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATCCGCCGAGAAC
EW731325       <-- ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATCCGCCGAGAAC
FD576507       <-- ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATCCGCCGAGAAC
EV551463       <-- ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTGTCATCCGCCGAGAAC
EV547806       <-- ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATCCGCCGAGAAC
FD954938       <-- ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATCCGCCGAGAAC
EX902300       <-- ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATCCGCCGAGAAC
EY913173       <-- ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATAC-CCGAGAAC
FD561493       <-- ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATCCGCCGAGAAC
EX772932       <-- ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATCCGCCGAGAAC
EY906549       <-- ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATCCGCCGAGAAC
FD950182       <-- ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATCCGCCGAGAAC
FD938773       <-- ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATCCGCCGAGAAC
EW717917       <-- ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATCCGCCGAGAAC
EX756931       <-- ......................................TCCGCCGAGA-C
FD580991       --> ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATCCGCCGAGAAC
EV543613       --> ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATCCGCCGAGAAC
EW735890       --> ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATCCGCCGAGAAC
EW736194       --> ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATCCGCCGAGAAC
EX906606       --> ATGGAGCAATGCCAAACTCTGCTTCTCCCATC..................
FD951081       --> ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATCCGCCGAGAAC
EV546556       --> ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTGTCATCCGCCGAGAAC
EX760634       --> ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATCCGCCGAGAAC
EX776783       --> ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATCCGCCGAGAAC
FD538545       --> ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATCCGCCGAGAAC
EX900075       --> ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATACGCCGAGAAC
EY919114       --> ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATCCGCCGAGAAC
FD565644       --> ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATCCGCCGAGAAC
FD945717       --> ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATCCGCCGAGAAC
EY902702       --> ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATCCGCCGAGAAC
EW728091       --> ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATACGCCGAGAAC
EY909455       --> ATGGAGCAATGCCAAACTCTGCTTCTCCCATCTTATCATAC-CCGAGAAC
EW737593       --> ATGGAGCAATGCCAAACTCTGTTTCTCCCATCTTATCATCCGCCGAGAAC

               551    -    601
UN23217        --> AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540108       <-- ..................................................
FD542479       <-- AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
EW731325       <-- AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
FD576507       <-- AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
EV551463       <-- AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
EV547806       <-- AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
FD954938       <-- AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
EX902300       <-- AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
EY913173       <-- AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
FD561493       <-- AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
EX772932       <-- AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
EY906549       <-- AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
FD950182       <-- AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
FD938773       <-- AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
EW717917       <-- AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
EX756931       <-- AAGTCCTTGTCGTAAACCGTAAGTTTA-CAGTGAGGTTTGGATCTGTA-C
FD580991       --> AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
EV543613       --> AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
EW735890       --> AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
EW736194       --> AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
EX906606       --> ..................................................
FD951081       --> AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
EV546556       --> AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
EX760634       --> AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
EX776783       --> AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
FD538545       --> AAGTCCTTGTCGTAAACCGTAAGTTTA.......................
EX900075       --> AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
EY919114       --> AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
FD565644       --> AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
FD945717       --> AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
EY902702       --> AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
EW728091       --> AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
EY909455       --> AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC
EW737593       --> AAGTCCTTGTCGTAAACCGTAAGTTTAACAGTGAGGTTTGGATCTGTAAC

               601    -    651
UN23217        --> AGAAAGAGTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540108       <-- ..................................................
FD542479       <-- AGAAAGAGTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
EW731325       <-- AGAAAGAGTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
FD576507       <-- AGAAAGAGTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
EV551463       <-- AGAAAGAGTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
EV547806       <-- AGAAAGAGTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
FD954938       <-- AGAAAGAGTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
EX902300       <-- AGAAAGAGTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
EY913173       <-- AGAAAGAGTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
FD561493       <-- AGAAAGAGTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
EX772932       <-- AGAAA--GTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
EY906549       <-- AGAAAGAGTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
FD950182       <-- AGAAAGAGTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
FD938773       <-- AGAAAGAGTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
EW717917       <-- AGAAAGAGTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
EX756931       <-- AGAAAGAGTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
FD580991       --> AGAAAGAGTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
EV543613       --> AGAAAGAGTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
EW735890       --> AGAAAGAGTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
EW736194       --> AGAAAGAGTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
EX906606       --> ..................................................
FD951081       --> AGAAAGAGTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
EV546556       --> AGAAAGAGTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
EX760634       --> AGAAAGAGTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
EX776783       --> AGAAAG--TTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
FD538545       --> ..................................................
EX900075       --> AGAAAGAGTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
EY919114       --> AGAAAGAGTTAAATAGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
FD565644       --> AGAAAGAGTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
FD945717       --> AGAAAGAGTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
EY902702       --> AGAAAGAGTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
EW728091       --> AGAAAGAGTTAAATCGTCGTTCCA..........................
EY909455       --> AGAAAGAGTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA
EW737593       --> AGAAAGAGTTAAATCGTCGTTCCATTCCGGGTTTATACTATGTTTGATTA

               651    -    701
UN23217        --> CACGGGTTTTAAGCTTCTGTTTTCCTGAGCGAAAGACGATGTAAGGATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540108       <-- ..................................................
FD542479       <-- CACGGGTTTTAAGCTTCTGTTTTCCTGAGCGAAAGACGATGTAAGGATCG
EW731325       <-- CACGGGTTTTAAGCTTCTGTTTTCCTGAGCGAAAGACGATGTAAGGATCG
FD576507       <-- CACGGGTTTTAAGCTTCTGTTTTCCTGAGCGAAAGACGATGTAAGGATCG
EV551463       <-- CACGGGTTTTAAGCTTCTGTTTTCCTGAGCGAAAGACGATGTAAGGATCG
EV547806       <-- CACGGGTTTTAAGCTTCTGTTTTCCTGAGCGAAAGACGATGTAAGGATCG
FD954938       <-- CACGGGTTTTAAGCTTCTGTTTTCCTGAGCGAAAGACGATGTAAGGATCG
EX902300       <-- CACGGGTTTTAAGCTTCTGTTTTCCTGAGCGAAAGACGATGTAAGGATCG
EY913173       <-- CACGGGTTTTAAGCTTCTGTTTTCCTGAGCGAAAGACGATGTAAGGATCG
FD561493       <-- CACGGGTTTTAAGCTTCTGTTTTCCTGAGCGAAAGACGATGTAAGGATCG
EX772932       <-- CACGGGTTTTAAGCTTCTGTTTTCCTGAGCGAAAGACGATGTAAGGATCG
EY906549       <-- CACGGGTTTTAAGCTTCTGTTTTCCTGAGCGAAAGACGATGTAAGGATCG
FD950182       <-- CACGGGTTTTAAGCTTCTGTTTTCCTGAGCGAAAGACGATGTAAGGATCG
FD938773       <-- CACGGGTTTTGAGCTTCTGTTTTCCTGAGCGAAAGACGATGTAAGGATCG
EW717917       <-- CACGGGTTTTAAGCTTCTGTTTTCCTGAGCGAAAGACGATGTAAGGATCG
EX756931       <-- CACGGGTTTTAAGCTTCTGTTTTCCTGAGCGAAAGACGATGTAAGGATCG
FD580991       --> CACGGGTTTTAAGCTTCTGTTTTCCTGAGCGAAAGACGATGTAAGGATCG
EV543613       --> CACGGGTTTT........................................
EW735890       --> CACGGGTTTTAAGCTTCTGTTTTCCTGAGCGAAAGACGATGTAAGGATCG
EW736194       --> CACGGGTTTTAAGCTTCTGTTTTCCTGAGCGAAAGACGATGTAAGGATCG
EX906606       --> ..................................................
FD951081       --> CACGGGTTTTAAGCTTCTGTTTTCCTGAGCGAAAGACGATGTAAGGATCG
EV546556       --> CACGGGTTTTAAGCTTCTGTTTTCCTGAGCGAAAGACGATGTAAGGATCG
EX760634       --> CACGGGTTTTAAGCTTCTGTTTTCCTGAGCGAAAGACGATGTAAGGATCG
EX776783       --> CACGGGTTTTAAGCTTCTGTTTTCCTGAGCGAAAGACGATGTAAGGATCG
FD538545       --> ..................................................
EX900075       --> CACGGGTTTTAAGCTTCTGTTTTCCTGAGCGAAAGACGATGTAAGGATCG
EY919114       --> CACGGGTTTTAAGCTTCTGTTTTCCTGAGCGAAAGATGATGTAAGGATCG
FD565644       --> CACGGGTTTTAAGCTTCTGTTTTCCTGAGCGAAAGACGATGTAAGGATCG
FD945717       --> CACGGGTTTTAAGCTTCTGTTTTCCTGAGCGAAAGACGATGTAAGGATCG
EY902702       --> CACGGGTTTTAAGCTTCTGTTTTCCTG.......................
EW728091       --> ..................................................
EY909455       --> CACGGGTTTTAAGCTTCTGTTTTCCTGAGCGAAAGACGATGTAAGGATCG
EW737593       --> CACGGGTTTTAAGCTTCTGTTTTCCTGAGCGAAAGACGATGTAAGGATCG

               701    -    751
UN23217        --> CTGCTTGAGGTATCTCTAATGGCGAGATTCACACCTCTCTTCACATGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540108       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542479       <-- CTGCTTGAGGTATCTCTAATGGCGAGATTCACACCTCTCTTCACATGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731325       <-- CTGCTTGAGGTATCTCTAATGGCGAGATTCACACCTCTCTTCACATGAAT  Raphanus sativus cv Rat-Tail Radish #3870
FD576507       <-- CTGCTTGAGGTATCCCTAATGGCGAGATTCACACCTCTCTTCACGTGAAT  Raphanus sativus cv Rat-Tail Radish #3870
EV551463       <-- CTGCTTGAGGTATCTCTAATGGCGAGATTCACACCTCTCTTCACATGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547806       <-- CTGCTTGAGGTATCTCTAATGGCGAGATTCACACCTCTCTTCACATGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD954938       <-- CTGCTTGAGGTATCTCTAGTGGCGAGATTCACACCTCTCTTCACATGAAT  Raphanus sativus cv Rat-Tail Radish #3870
EX902300       <-- CTGCTTGAGGTATCTCTAATGGCGAGATTCACACCTCTCTTCACATGAAT  Raphanus sativus cv Rat-Tail Radish #3870
EY913173       <-- CTGCTTGAGGTATCTCTAATGGCGAGATTCACACCTCTCTTCACGTGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561493       <-- CTGCTTGAGGTATCTCTAATGGCGAGATTCACACCTCTCTTCACATGAAT  Raphanus sativus var. oleiformis
EX772932       <-- CTGCTTGAGGTATCTCTAATGGCGAGATTCACACCTCTCTTCACATGAAT  Raphanus raphanistrum subsp. landra
EY906549       <-- CTGCTTGAGGTATCTCTAATGGCGAGATTCACACCTCTCTTCACATGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD950182       <-- CTGCTTGAGGTATCTCTAATGGCGAGATTCACACCTCTCTTCACGTGAAT  Raphanus sativus cv Early Scarlet Globe
FD938773       <-- CTGCTTGAGGTATCTCTAATGGCGAGATTCACACCTCTCTTCACGTGAAT  Raphanus sativus var. oleiformis
EW717917       <-- CTGCTTGAGGTATCTCTAATGGCGAGATTCGCACCTCTCTTCACATGAAT  Raphanus sativus var. oleiformis
EX756931       <-- CTGCTTGAGGTATCTCTAATGGCGAGATTCACACCTCTCTTCACATGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD580991       --> CTGCTTGAGGTATCCCTAATGGCGAGATTCACACCTCTCTTCACgt....  Raphanus sativus cv Rat-Tail Radish #3870
EV543613       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW735890       --> CTGCTTGAGGTATCTCTAATGGCGAGATTCACACCTCTCTTCACATGAAT  Raphanus sativus cv Rat-Tail Radish #3870
EW736194       --> CTGCTTGAGGTATCTCTAATGGCGAGATTCACACCTCTCTTCACATGAAT  Raphanus sativus cv Rat-Tail Radish #3870
EX906606       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD951081       --> CTGCTTGAGGTATCTCTAGTGGCGAGATTCACACCTCTCTT.........  Raphanus sativus cv Rat-Tail Radish #3870
EV546556       --> CTGCTTGAGGTATCTCTAATGGCGAGATTCACACCTCTCTTCACATGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760634       --> CTGCTTGAGGTATCTCTAATGGCGAGATTCACACCTCTCTTCACATGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776783       --> CTGCTTGAGGTATCTCTAATGGCGAGATTCACACCTCTCTTCACATGAAT  Raphanus raphanistrum subsp. landra
FD538545       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900075       --> CTGCTTGAGGTATCTCTAATGGCGAGATTCACACCTCTCTTCACGTGAAT  Raphanus sativus cv Early Scarlet Globe
EY919114       --> CTGCTTGAGGTATATCTAATGGCGAGATTCACACCTCTCTTCACATGAAT  Raphanus raphanistrum subsp. landra
FD565644       --> CTGCTTGAGGTATCTCTAATGGCGAGATTCACACCTCTCTTCACATGAAT  Raphanus sativus var. oleiformis
FD945717       --> CTGCTTGAGGTATCTCTAATGGCGAGATTCACACCTCTCTTCACGTGAAT  Raphanus sativus cv Early Scarlet Globe
EY902702       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW728091       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY909455       --> CTGCTTGAGGTATCTCTAATGGCGAGATTCACACCTCTCTTCACGTGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737593       --> CTGCTTGAGGTATATCTAATGGCGAGATTCACACCTCTCTTCACATGAAT  Raphanus sativus cv Rat-Tail Radish #3870

               751    -    801
UN23217        --> TCTCAGAAGACCCAGTAGATTCTCCATTTTTGGGTCAATTGCAAGATGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540108       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542479       <-- TCTCAGAAGACCCAGTAGATTCTCCATTTTTGGGTCAATTGCAAGATGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731325       <-- TCTCAGAAGACCCAGTAGATTCTCCATTTTTTGGTCAATTGCAAGATGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD576507       <-- TCTCAGAAGACCCAGCAGATTCTCCATTTTTGGGTCAATTGCAAGATGCA  Raphanus sativus cv Rat-Tail Radish #3870
EV551463       <-- TCTCAGAAGACCCAGTAGATTCTCCATTTTTGGGTCAATTGCAAGATGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547806       <-- TCTCAAAAGACCCAGTAGATTCTCCATTTTTGGGTCAATTGCAAGATGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD954938       <-- TCTCAGAAGACCCAGTAGATTCTCCATTTTTTGGTCAATTGCAAGATGCA  Raphanus sativus cv Rat-Tail Radish #3870
EX902300       <-- TCTCAGAAGACCCAGTAGATTCTCCATTTTTTGGTCAATTGCAAGATGCA  Raphanus sativus cv Rat-Tail Radish #3870
EY913173       <-- TCTCAGAAGACCCAGCAGATTCTCCATTTTTGGGTCAATTGTAAGATGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561493       <-- TCTCAGAAGACCCAGTAGATTCTCCATTTTTTGGTCAATTGCAAGATGCA  Raphanus sativus var. oleiformis
EX772932       <-- TCTCAGAAGACCCAGTAGATTCTCCATTTTTTGGTCAATTGCAAGATGCA  Raphanus raphanistrum subsp. landra
EY906549       <-- TCTCAGAAGACCCAGTAGATTCTCCATTTTTGGGTCAATTGCAAGATGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD950182       <-- TCTCAGAAGACCCAGCAGATTCTCCATTTTTGGGTCAATTGCAAGATGCA  Raphanus sativus cv Early Scarlet Globe
FD938773       <-- TCTCAGAAGACCCAGTAGATTCTCCATTTTTGGGTCAATTGCAAGATAAA  Raphanus sativus var. oleiformis
EW717917       <-- TCTCAGAAGACCCAGCAGATTCTCCATTTTTGGGTCAATAGCAAGATGCA  Raphanus sativus var. oleiformis
EX756931       <-- TCTCAGAAGACCCAGTAGATTCTCCATTTTTGGGTCAATTGCAAGATGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD580991       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV543613       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW735890       --> TCTCAGAAGACCCAGTAGATTCTCCATTTTTTGGTCAATTGCAAGATGCA  Raphanus sativus cv Rat-Tail Radish #3870
EW736194       --> TCTCAGAAGACCCAGTAGATTCTCCATTTTTTGGTCAATTGCAAGATGCA  Raphanus sativus cv Rat-Tail Radish #3870
EX906606       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD951081       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV546556       --> TCTCAGAAGACCCAGTAGATTCTCCATTTTTGGGTCAATTGCAAGATGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760634       --> TCTCAGAAGACCCAGTAGATTCTC..........................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776783       --> TCTCAGAAGACCCAGTAGATTCTCCATTTTTTGGTCAATTGCAAGATGCA  Raphanus raphanistrum subsp. landra
FD538545       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900075       --> TCTCAGAAGACCCAGCAGATTCTCCATTTTTGGGTCAATTGCAga.....  Raphanus sativus cv Early Scarlet Globe
EY919114       --> TCTCAGAAGACCCAGTAGATTCTCCATTTTTTGGTCAATT..........  Raphanus raphanistrum subsp. landra
FD565644       --> TCTCAGAAGACCCAGTAGATTCTCCATTTTTTGGTCAATTGCAAGATGCA  Raphanus sativus var. oleiformis
FD945717       --> TCTCAGAAGACCCAGCAGATTCTCCATTTTTGGGTCAATTGCAAGATGCA  Raphanus sativus cv Early Scarlet Globe
EY902702       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW728091       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY909455       --> TCTCAGAAGACCCAGCAGATTCTCCATTTTTGGGTCAATTGTAAGATGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737593       --> TCTCAGAAGACCCAGTAGATTCTCCATTTTTTGGTCAATTGCAAGATGCA  Raphanus sativus cv Rat-Tail Radish #3870

               801    -    851
UN23217        --> AA-GTTGGTTTCTGGTAGAAACTGTGCTTTTGGACTTTGGAAAGCTGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540108       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542479       <-- AA-GTTGGTTTCTGGTAGAAACTGTGCTTTTGGACTTTGGAAAGCTGCcc  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731325       <-- AA-GTTGGTTTCTGGTAGAAACTGTGCTTTTGGACTTTGGAAAGCTGCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD576507       <-- AA-GTTGGTTTCTTGTAGAAACTGTGGTTTTGGACTTTGAAAAa......  Raphanus sativus cv Rat-Tail Radish #3870
EV551463       <-- AA-GTTGGTTTCTGGTAGAAACTGTGCTTTTGGACTTTGGAAAGCTGCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547806       <-- AA-GTTGGTTTCTGGTAGAAACTGTGCTTTTGGACTTTGGAAAGCTcc..  Raphanus raphanistrum subsp. raphanistrum (NY)
FD954938       <-- AA-GTTGGTTTCTGGTAGAAACTGTGCTTTTGGACTTTGGAAAGCTGCGA  Raphanus sativus cv Rat-Tail Radish #3870
EX902300       <-- AA-GTTGGTTTCTGGTAGAAACTGTGCTTTTGGACTTTGGAAAGCTGCGA  Raphanus sativus cv Rat-Tail Radish #3870
EY913173       <-- AA-GTTGGTTTCTTGTAGAAACTGTGGTTTTGGACTTTGAAAAa......  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561493       <-- AA-GTTGGTTTCTGGTAGAAACTGTGCTTTTGGACTTTGGAAAGCTGCAA  Raphanus sativus var. oleiformis
EX772932       <-- AA-GTTGGTTTCTGGTAGAAACTGTGCTTTTGGACTTTGGAAAGCTGCGA  Raphanus raphanistrum subsp. landra
EY906549       <-- AA-GTTGGTTTCTGGTAGAAACTGTGCTTTTGGACTTTGGAAAGCTcc..  Raphanus raphanistrum subsp. raphanistrum (MS)
FD950182       <-- AA-GTTGGTTTCTTGTAGAAACTGTGGTTTTGGACTTTGAAAAa......  Raphanus sativus cv Early Scarlet Globe
FD938773       <-- AAGGTTGGTTTCTTGTAGAAACTGTGCTTTAGGACTTTGGAAAACTGtcc  Raphanus sativus var. oleiformis
EW717917       <-- AA-GTTGGTTGCTGGTAGAAACTGTGCTTTTGGACTTTGGAAAGCTGCGA  Raphanus sativus var. oleiformis
EX756931       <-- AA-GTTGGTTTCTGGTAGAAACTGTGCTTTTGGACTT-GGAAAGCTcc..  Raphanus raphanistrum subsp. raphanistrum (MS)
FD580991       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV543613       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW735890       --> AA-GTTGGTTTCTGGTAGAAACTGTGCTTTTGGACTTTGGAAAGCTGCGA  Raphanus sativus cv Rat-Tail Radish #3870
EW736194       --> AA-GTTGGTTTCTGGTAGAAACTGTGCTTTTGGACTTTGGAAAGCTGC..  Raphanus sativus cv Rat-Tail Radish #3870
EX906606       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD951081       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV546556       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760634       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776783       --> AA-GTTGGTTTCTGGTAGAAACTGTGCTTT-GGACTTTGGAAAGCTGCGA  Raphanus raphanistrum subsp. landra
FD538545       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900075       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY919114       --> ..................................................  Raphanus raphanistrum subsp. landra
FD565644       --> AA-GTTGGTTTCTGGTAGAAACTGTGCTTT-GGACTTTGGAAAGCTGCAA  Raphanus sativus var. oleiformis
FD945717       --> AA-GTTGGTTTCTt....................................  Raphanus sativus cv Early Scarlet Globe
EY902702       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW728091       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY909455       --> AA-GTTGGTTTCTTGTAGAAACTGTGGTTTTGGACTT.............  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737593       --> AA-GTTGGTTTCTGGTAGAAACTGTGCTTTTGGACTTTGGAAAGCTGCGA  Raphanus sativus cv Rat-Tail Radish #3870

               851    -    901
UN23217        --> TCC
                   ~~~
FD540108       <-- ...
FD542479       <-- c..
EW731325       <-- TCC
FD576507       <-- ...
EV551463       <-- TCC
EV547806       <-- ...
FD954938       <-- TCC
EX902300       <-- TCC
EY913173       <-- ...
FD561493       <-- TCC
EX772932       <-- TCC
EY906549       <-- ...
FD950182       <-- ...
FD938773       <-- ...
EW717917       <-- TCC
EX756931       <-- ...
FD580991       --> ...
EV543613       --> ...
EW735890       --> TCC
EW736194       --> ...
EX906606       --> ...
FD951081       --> ...
EV546556       --> ...
EX760634       --> ...
EX776783       --> TC.
FD538545       --> ...
EX900075       --> ...
EY919114       --> ...
FD565644       --> TC.
FD945717       --> ...
EY902702       --> ...
EW728091       --> ...
EY909455       --> ...
EW737593       --> TCC