Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN23235

               1      -     51
UN23235        --> CGGCGTGGAAGATTCTATTTTGTATACAACACAATAGTCATGTAAAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534905       <-- .gaCGTGGAAGATTCGATTT-GTATACAACACAATAGTCATGTAAAGAGA
EX762606       <-- ..........................................TAAAGAGA
EY913361       <-- ..................................................
EW724216       <-- ..................................................
EW732063       <-- ..................................................
FD948294       <-- ..................................................
EY897437       <-- ..................................................
EX750400       <-- ..................................................
FD564866       --> CGGCGTGGAAGATTCTATTTTGTATACAACATAATAGTCATGTAAAGAGA
EV539704       --> ................ATTTTGTATACAACACAATAGTCATGTAAAGAGA
EW728815       --> .....................gcATACAACACGATAGTCATGTAAAGAGA
EX766829       --> ...................................cGTCATGTAAAGAGA
EY909606       --> ..................................................
FD944110       --> ..................................................
EX901156       --> ..................................................

               51     -    101
UN23235        --> TCTTTAAACGAGTCACACGATGACTTACAATACAATATTGTTTAATGGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534905       <-- TCTTTAAACGAGTCACACGATGACTTACAATACAATATTGTTTAATGGGC
EX762606       <-- TCTT-AAACGAGTCACACGATGACT-ACAATACAATAT-G-TTAATGGGC
EY913361       <-- ..................................................
EW724216       <-- ..................................................
EW732063       <-- ..................................................
FD948294       <-- ..................................................
EY897437       <-- ..................................................
EX750400       <-- ..................................................
FD564866       --> TCTTTAAACGAGTCACACGATGACTTACAATACAATATTGTTTAATGGGC
EV539704       --> TCTTTAAACGAGTCACACGATGACTTACAATACAATATTGTTTAATGGGC
EW728815       --> TCTTTAAACGAGTCACACGATGACTTACGATACAATATTGTTTAATGGGC
EX766829       --> TCTTTAAACGAGTCACACGATGACTTACAATACAATATTGTTTAATGGGC
EY909606       --> ................ACGATGACCTACAATACAATATTGTTTAATGGGC
FD944110       --> ..........................acgATACAATATTGTTTAATGGGC
EX901156       --> ..................................................

               101    -    151
UN23235        --> TTGGGCCTCATATGAGTCTACACATCATTTGCTTTCTTTAACAACCACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534905       <-- TTGGGCCTCATATGAGTCTACACATCATTTGCTTTCTTTAACAACCACTG
EX762606       <-- TTG--GCTCATATGAGTCTACACATCATTTGCTTTCTTTAACAACCACTG
EY913361       <-- ........CATATGAGTCTACACATCATTTGCTTTCTTTAACAACCAATG
EW724216       <-- ..................................................
EW732063       <-- ..................................................
FD948294       <-- ..................................................
EY897437       <-- ..................................................
EX750400       <-- ..................................................
FD564866       --> TTGGGCCTCATATGAGTCTACACATCATTTGCTTTCTTTAACAACCACTG
EV539704       --> TTGGGCCTCATATGAGTCTACACATCATTTGCTTTCTTTAACAACCACTG
EW728815       --> TTGGGCCTCATATGAGTCTACACATCATTTACTTTCTTTAACAACCACTG
EX766829       --> TTGGGCCTCATATGAGTCTACACATCATTTGCTTTCTTTAACAACCACTG
EY909606       --> TTGGGCCTCATATGAGTCTACACATCATTTGCTTTCTTTAACAACCAATG
FD944110       --> TTGGGCCTCATATGAGTCTACACATCATTTACTTTCTTTAACAACCACTG
EX901156       --> ..........................ATTTACTTTCTTTAACAACCACTG

               151    -    201
UN23235        --> TGAAACCCTTTTGTTCTGTATATCTATGAGAGCTTACATGAGCTTCTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534905       <-- TGAAACCCTTTTGTTCTGTATATCTATGAGAGCTTACATGAGCTTCTTCT
EX762606       <-- TGAAACC-TTTTGTTCTGTATATCTATGAGAGCTTAAATGAGCTTCTTCT
EY913361       <-- TGAA-CCCTTTTGTTCTGTATATCTATGAGAGCTTACATGAGCTTCTTCT
EW724216       <-- ............tTTCTGTATATCTATGAGAGCTTACATGAGCTTCTTCT
EW732063       <-- ...............CTGTATATCTATGAGAGCTTACATGAGCTTCTTCT
FD948294       <-- ..................................................
EY897437       <-- ..................................................
EX750400       <-- ..................................................
FD564866       --> TGAAACCCTTTTGTTCTGTATATCTATGAGAGCTTACATGAGCTTCTTCT
EV539704       --> TGAAACCCTTTTGTTCTGTATATCTATGAGAGCTTACATGAGCTTCTTCT
EW728815       --> TGAAACCCTTTT-TTCTGTATATCTATGAGAGCTTACATGAGCTTCTTCT
EX766829       --> TGAAACCCTTTTGTTCTGTATATCTATGAGAGCTTAAATGAGCTTCTTCT
EY909606       --> TGAAACCCTTTTGTTCTGTATATCTATGAGAGCTTACATGAGCTTCTTCT
FD944110       --> TGAAACCCTTTT-TTCTGTATATCTATGAAAGCTTACATGAGCTTCTTCT
EX901156       --> TGAAACCCTTTT-TTCTGTATATCTATGAGAGCTTACATGAGCTTCTTCT

               201    -    251
UN23235        --> TGTTCTGTTTCTCTTCTCTCC-ATTCCTTGATATCATTCTCTATCCTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534905       <-- TGTTCTGTTTCTCTTCTCTCC-ATTCCTTGATATCATTCTCTATCCTGCA
EX762606       <-- TGTTCTGTTTCTCTTCTCTCC-ATTCCTTGATATCATTCTCTATCCTGCA
EY913361       <-- TGTTCTGTTTCTCTTCTCTCC-ATTCCTTGATATCATTCTCTATCCTGCA
EW724216       <-- TGTTCTGTTTCTCTTCTCTCCCATTCCTTGATATCATTCTCTATCCTGCA
EW732063       <-- TGTTCTGTTTCTCTTCTCTCC-ATTCCTTGATATCATTCTCTATCCTGCA
FD948294       <-- .....TGTTTCTCTTCTCTCC-ATTCCTTGATATCATTCTCTATCCTGCA
EY897437       <-- ................................................CA
EX750400       <-- ..................................................
FD564866       --> TGTTCTGTTTCTCTTCTCTCC-ATTCCTTGATATCATTCTCTATCCTGCA
EV539704       --> TGTTCTGTTTCTCTTCTCTCC-ATTCCTTGATATCATTCTCTATCCTGCA
EW728815       --> TGTTCTGTTTCTCTTCTCTCC-ATTCCTTGATATCATTCTCTATCCTGCA
EX766829       --> TGTTCTGTTTCTCTTCTCTCC-ATTCCTTGATATCATTCTCTATCCTGCA
EY909606       --> TGTTCTGTTTCTCTTCTCTCC-ATTCCTTGATATCATTCTCTATCCTGCA
FD944110       --> TGTTCTGTTTCTCTTCTCTCC-ATTCCTTGATATCATTCTCTATCCTGCA
EX901156       --> TGTTCTGTTTCTCTTCTCTCC-ATTCCTTGATATCATTCTCTATCCTGCA

               251    -    301
UN23235        --> GTCAACGCGTGCTTTAAATCCAGGGTATGGCTCGTATCCAAAACCAGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534905       <-- GTCAACGCGTGCTTTAAATCCAGGGTATGGCTCGTATCCAAAACCAGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762606       <-- GTCAACGCGTGCTTTAAATCCAGGGTATGGTTCGTATCCAAAACCAGACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY913361       <-- GTCAACGCGTGCTTTAAATCCAGGGTATGGTTCGTATCCAAAACCAGACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724216       <-- GTCAACGCGTGCTTTAAATCCAGGGTATGGCTCGTATCCAAAACCAGACT  Raphanus sativus cv Early Scarlet Globe
EW732063       <-- GTCAACGCGTGCTTTAAATCCAGGGTATGGCTCGTATCCAAA--------  Raphanus sativus cv Rat-Tail Radish #3870
FD948294       <-- GTCAACGCGTGCTTTAAATCCAGGGTATGGCTCGTATCCAAAACCAGACT  Raphanus sativus cv Early Scarlet Globe
EY897437       <-- GTCAACGCGTGCTTTAAATCCAGGGCATGGCTCGTATCCAAAACCAGACT  Raphanus raphanistrum subsp. maritimus
EX750400       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD564866       --> GTCAACGCGTGCTTTAAATCCAGGGTATGGCTCGTATCCAAAACCAGACT  Raphanus sativus var. oleiformis
EV539704       --> GTCAACGCGTGCTTTAAATCCAGGGTATGGCTCGTATCCAAAACCAGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW728815       --> GTCAACGCGTGCTTTAAATCCAGGGTATGGCTCGTATCCAAAACCAGACT  Raphanus sativus cv Early Scarlet Globe
EX766829       --> GTCAACGCGTGCTTTAAATCCAGGGTATGGTTCGTATCCAAAACCAGACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909606       --> GTCAACGCGTGCTTTAAATCCAGGGTATGGTTCGTATCCAAAACCAGACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD944110       --> GTCAACGCGTGCTTTAAATCCAGGGTATGGCTCGTATCCAAAACCAGACT  Raphanus sativus cv Early Scarlet Globe
EX901156       --> GTCAACGCGTGCTTTAAATCCAGGGTATGGCTCGTATCCAAAACCAGACT  Raphanus sativus cv Early Scarlet Globe

               301    -    351
UN23235        --> GCATCACCTCGAGCAACACGAAGAAAGGACCCATCAGAAAAGCTTGGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534905       <-- GCATCACCTCGAGCAACACGAAGAAAGGACCCATCAGAAAAGCTTGGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762606       <-- GCATCACCTCAAGCAACACGAAGAAAGGACCCATCAGAAAAGCTTGCACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY913361       <-- GCATCACCTCAAGCAACACGAAGAAAGGACCCATCAGAAAAGCTTGCACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724216       <-- GCATCACCTCGAGCAACACGAAGAAAGGACCCATCAGAAAAGCTTGGACT  Raphanus sativus cv Early Scarlet Globe
EW732063       <-- -ACCAGACTCGAGCAACACGAAGAAAGGACCCATCAGAAAAGCTTGGACT  Raphanus sativus cv Rat-Tail Radish #3870
FD948294       <-- GCATCACCTCGAGCAACACGAAGAAAGGACCCATCAGAAAAGCTTGGACT  Raphanus sativus cv Early Scarlet Globe
EY897437       <-- GCATCACCTCGAGCAACACGAAGAAAGGACCCATCAGAAAAGCTTGGACT  Raphanus raphanistrum subsp. maritimus
EX750400       <-- .............................................GGACT  Raphanus raphanistrum subsp. maritimus
FD564866       --> GCATCACCTCGAGCAACACGAAAAAAGGACCCATCAAAAAAGCTTGGACT  Raphanus sativus var. oleiformis
EV539704       --> GCATCACCTCGAGCAACACGAAGAAAGGACCCATCAGAAAAGCTTGGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW728815       --> GCATCACCTCGAGCAACACGAAGAAAGGACCCATCAGAAAAGCTTGGACT  Raphanus sativus cv Early Scarlet Globe
EX766829       --> GCATCACCTCAAGCAACACGAAGAAAGGACCCATCAGAAAAGCTTGCACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909606       --> GCATCACCTCAAGCAACACGAAGAAAGGACCCATCAGAAAAGCTTGCACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD944110       --> GCATCACCTCGAGCAACACGAAAAAAGGACCCATCAAAAAA.........  Raphanus sativus cv Early Scarlet Globe
EX901156       --> GCATCACCTCGAGCAACACGAAGAAAGGACCCATCAAAAAAGCTTGGACT  Raphanus sativus cv Early Scarlet Globe

               351    -    401
UN23235        --> AGATTGTCTAGAAGCGCAGGAGCTCGTTTCTCAAACAAGCCGTGACCGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534905       <-- AGATTGTCTAGAAGCGCAGGAGCTCGTTTCTCAAACAAGCCGTGACCGAG
EX762606       <-- AGATTGTCTAGAAGCGCAGGAGCTCGTTTCTCAAACAAGCCGTGACCGAG
EY913361       <-- GGATTGTCTAGAAGCGCAGGAGCTCGTTTCTCAAACAAGCCGTGACCGAG
EW724216       <-- AGATTGTCTAGAAG-GCAGGAGCTCGTTTCTCAAACAAGCCGTGACCGAG
EW732063       <-- AGATTGTCTAGAAGCGCAGGAGCTCGTTTCTCAAACAAGCCGTGACCGAG
FD948294       <-- AGATTGTCTAGAAGCGCAGGAGCTCGTTTCTCAAACAAGCCGTGACCGAG
EY897437       <-- AGATTGTCTAGAAGCGCAGGAGCTCGTTTCTCAAACAAGCCGTGACCGAG
EX750400       <-- AGATTGTCTAGAA-CGCAGGAGCTCGTTT-TCAAACAAGCCGTGACCGAG
FD564866       --> AAATTGTCTAGAAGCGCAGGAGCTCGTTTCTCAAACAAGCCGTGACCGAG
EV539704       --> AGATTGTCTAGAAGCGCAGGAGCTCGTTTCTCAAACAAGCCGTGACCGAG
EW728815       --> AGATTGTCTAGAAG-GCAGGAGCTCGTTTCTCAAACAAGCCGTGACCGAG
EX766829       --> AGATTGTCTAGAAGCGCAGGAGCTCGTTTCTCAAACAAGCCGTGACCGAG
EY909606       --> GGATTGTCTAGAAGCGCAGGAGCTCGTTTCTCAAACAAGCCGTGACCGAG
FD944110       --> ..................................................
EX901156       --> AGATTGTCTAGAAGCGCAGGAGCTCGTTTCTCAAACAAGCCGTGACCGAG

               401    -    451
UN23235        --> GAACTGACCGGTCCAGCATAGGAGCTGAGAAGCTACTCCAACCTTCAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534905       <-- GAACTGACCGGTCCAGCATAGGAGCTGAGAAGCTACTCCAACCTTCAAGG
EX762606       <-- GAACTGACCGGTCCAGCATAGGAGCTGAGAAGCTACTCCAACCTTCAAGG
EY913361       <-- GAACTGACCGGTCCAGCATAGGAGCTGAGAAGCTACTCCAACCTTCAAGG
EW724216       <-- GAACTGACCGGTCCAGCATAGGAGCTGAGAAGCTACTCCAACCTTCAAGG
EW732063       <-- GAACTGACCGGTCCAGCATAGGAGCTGAGAAGCTACTCCAACCTTCAAGG
FD948294       <-- GAACTGACCGGTCCAGCATAGGAGCTGAGAAGCTACTCCAACCTTCAAGG
EY897437       <-- GAACTGACCGGTCCAGCATAGGAGCTGAGAAGCTACTCCAACCTTCAAGG
EX750400       <-- GAACTGACCGGTCCAGCATAGGAGCTGAGAAGCTA-TCCAACCTTCAAGG
FD564866       --> GAACTGACCGGTCCAGCATAGGAGCTGAAAAACTAATCCAACCTTCAAGG
EV539704       --> GAACTGACCGGTCCAGCATAGGAGCTGAGAAGCTACTCCAACCTTCAAGG
EW728815       --> GAACTGACCGGTCCAGCATAGGAGCTGAAAAGCTACTCCAACCTTCAAGG
EX766829       --> GAACTGACCGGTCCAGCATAGGAGCTGAGAAGCTACTCCAACCTTCAAGG
EY909606       --> GAACTGACCGGTCCAGCATAGGAGCTGAGAAGCTACTCCAACCTTCAAGG
FD944110       --> ..................................................
EX901156       --> GAACTGACCGGTCCAGCATAGGAGATGAGAAGCTACTCCAACCTTCAAGG

               451    -    501
UN23235        --> TCAAGGAATGTCCTAGACGAGCTGCGAGAAAGCTGGAGCCGATCCAGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534905       <-- TCAAGGAATGTCCTAAACGAGCTGCGAGAAAGCTGGAGCCGATCCAGCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762606       <-- TCAAGGAATGTCCTAGACGAGATGCGAGAAAGCTGGAGCCGATCCAGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY913361       <-- TCAAGGAATGTCCTAGACGAGATGCGAGAAAGCTGGAACCGATCCAGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724216       <-- TCAAGGAATGTCCTAGACGAGCTGCGAGAAAGCTGGAGCCGATCCAGCAA  Raphanus sativus cv Early Scarlet Globe
EW732063       <-- TCAAGGAATGTCCTAGACGAGCTGCGAGAAAGCTGGAGCCGATCCAGCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD948294       <-- TCAGGGAATGTCCTAGACGAGCTGCGAGAAAGCTG-AGCCGATCCAGCAA  Raphanus sativus cv Early Scarlet Globe
EY897437       <-- TCGAGGAATGTCCTAGACGAGCTGCGAGAAAGCTGGAGCCGATCCAGCAA  Raphanus raphanistrum subsp. maritimus
EX750400       <-- TCGAGGAATGTCCTAGACGAGCTGCGAGAAAGCTGGAGCCGATCCAGCAA  Raphanus raphanistrum subsp. maritimus
FD564866       --> TCAAGGAATGTCCTAAACGAGCTGCGAGAAAGCTGGAGCCGATCCAGCAA  Raphanus sativus var. oleiformis
EV539704       --> TCAAGGAATGTCCTAAACGAGCTGCGAGAAAGCTGGAGCCGATCCAGCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW728815       --> TCAAGGAATGTCCTAGACGAGCTGCGAGAAAGCTGGAGCCGATCCAGCAA  Raphanus sativus cv Early Scarlet Globe
EX766829       --> TCAAGGAATGTCCTAAACGAGATGCGAGAAAGCTGGAGCCGATCCAGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909606       --> TCAAGGAATGTCCTAGACGAGATGCGAGAAAGCTGGAACCGATCCAGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD944110       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX901156       --> TCAAGGGATGTC......................................  Raphanus sativus cv Early Scarlet Globe

               501    -    551
UN23235        --> GAGAAACATAACAGAGCAGCTAAAACTCCAGACTTCTTATCCAAACATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534905       <-- GAGAAACATAACAGAGCAGCTAAAACTCCAGACTTCTTATCCAAACATAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762606       <-- GAGAAACATAGCAGAGCAGCTAAAACTCCAGACTTCTTATCCAAACATAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY913361       <-- GAGAAACATAGCAGAGCAGCTAAAACTCCAGACTTCTTATCCAAACATAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724216       <-- GAGAAACATAACAGAGCAGCTAAAACTCCAGACTTCTTATCCAAACATAT  Raphanus sativus cv Early Scarlet Globe
EW732063       <-- GAGAAACATAACAGAGCAGCTAAAGCTCCAGACTTCTTATCCAAACATAT  Raphanus sativus cv Rat-Tail Radish #3870
FD948294       <-- GAGAAACATAACAGAGCAGCTAAAACTCCAGACTTCTTATCCAAACATAT  Raphanus sativus cv Early Scarlet Globe
EY897437       <-- GAGAAACATAACAGAGCAGCTAAAACTCCAGAATTCTTATCCAAACATAT  Raphanus raphanistrum subsp. maritimus
EX750400       <-- GAGAAACATAACAGAGCAGCTAAAACTCCAGAATTCTTATCCAAACATAT  Raphanus raphanistrum subsp. maritimus
FD564866       --> GAAAAACATAACAAAGCAGCTAAAACTCCAGACTTCTTATCCAAACATAT  Raphanus sativus var. oleiformis
EV539704       --> GAGAAACATAACAGAGCAGCTAAAA.........................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW728815       --> GAGAAACATAACAGAGCAGCTAAAACTCCAGACTTCTTATCCAAACATAT  Raphanus sativus cv Early Scarlet Globe
EX766829       --> GAGAAACATAGCAAAGCAGCTAAAACTCCAGACTTCTTATCCAAACATAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909606       --> GAGAAACATAGCAGAGCAGCTAAAACTCCAGACTTCTTATCCAAACATAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD944110       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX901156       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               551    -    601
UN23235        --> GTAGAAGAAAGCATAGATCAGAGTGAGAATAAAACCAATGTCCAAGCGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534905       <-- GTAGAAGACAGCATAGATCAGAGTGAGGATAAAACCAACGTCCAAGCGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762606       <-- GTAGAAGAAAGCATAGATCAGAGTGAGAATAAAACCAATGTCCAAGCGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY913361       <-- GTAGAAGAAAGCATAGATCAGAGTGAGAATAAAACCAATGTCCAAGCGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724216       <-- GTAGAAGAAAGCATAGATCACAGTGAGAATAAAACCAATATCCAAGCGTA  Raphanus sativus cv Early Scarlet Globe
EW732063       <-- GTAGAAGACAGCATAGATCAGAGTGAGAATAAAACCAATGTCCAAGCGTA  Raphanus sativus cv Rat-Tail Radish #3870
FD948294       <-- GTAGAAGAAAGCATAGATCACAGTGAGAATAAAACCAATATC--CGCGTA  Raphanus sativus cv Early Scarlet Globe
EY897437       <-- GTAGAAGACAGCATAGATCACAGTGAGAATAAAACCAATGTCCAAGCGTA  Raphanus raphanistrum subsp. maritimus
EX750400       <-- GTAGAAGACAGCATAGATCACAGTGAGAATAAAACCAATGTCCAAGCGTA  Raphanus raphanistrum subsp. maritimus
FD564866       --> GTAGAAGAAAGCATAGATCACAGTGAGAATAAAACCAATGTCCAATCGTA  Raphanus sativus var. oleiformis
EV539704       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW728815       --> GTAGAAGAAAGCATAGATCACAGTGAGAATAAAACCAATATCCAAGCGTA  Raphanus sativus cv Early Scarlet Globe
EX766829       --> GTAGAAGAAAGCATAGATCAGAGTGAGAATAAAACCAATGTCCAAGCGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909606       --> GTAGAAGAAAGCATAGATCAGAGTGAGAATAAAACCAATGTCCAAGCGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD944110       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX901156       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               601    -    651
UN23235        --> GGACACTGTCAAAGGTCAACGCTTCGATGAACCCTAATTGAGATGGATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534905       <-- GGACACTGTCAAAGGTCAACGCTTCGATGAACCCTAATTGAGATGGATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762606       <-- GGACACCGTGAAAGGTCAACGCTTCGATGAACCCTAGTTGAGAGAGATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY913361       <-- GGACACCGTGAAAGGTCAACGCTTCGATGAACCCTAGTTGAGAGAGATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724216       <-- GGACACTGTCAAAGGTCAACGCTTCGATGAACCCTAATTGAGATGGATCA  Raphanus sativus cv Early Scarlet Globe
EW732063       <-- GGACACTGTCAAAGGTCAACGCTTCGGTGAATCCTAATTGAGATGGATCA  Raphanus sativus cv Rat-Tail Radish #3870
FD948294       <-- GGACACTGTCAAAGGTCAACGCTTCGATGAACCCTAATTGAGATGGATCA  Raphanus sativus cv Early Scarlet Globe
EY897437       <-- GGGCACTGTCGAAGGTCAACGCTTCGATTAACCCTAATTGAGATGGATCA  Raphanus raphanistrum subsp. maritimus
EX750400       <-- GGGCACTGTCGAAGGTCAACGCTTCGATGAACCCTAATTGAGATGGATCA  Raphanus raphanistrum subsp. maritimus
FD564866       --> GGACACTGTCAAAGGTCAACGCTTCGc.......................  Raphanus sativus var. oleiformis
EV539704       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW728815       --> GGACACTGTCAAAGGTCAACGCTTCGATGAACCCTAATTGAGATGGATCA  Raphanus sativus cv Early Scarlet Globe
EX766829       --> GGACACCGTGAAAGGTCAACGCTTCGATGAACCCTAGTTGAGAGAGATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909606       --> GGACACCGTGAAAGGTCAACGCTTCGATGAACCCTAGTTGAGAGAGATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD944110       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX901156       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               651    -    701
UN23235        --> AGAATCGGTTGCGTACAGTAGAGGCAAAGTAGGGTGGCGAAGACGTTAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534905       <-- AGAATCGGTTGCGTACAGTAGAGGCAAAGTAGGGTGGCGAAGACGTTAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762606       <-- ATAATCGGTTGCGTACAGTAGAGGCAAAGTAGGGTGGCGAAGACGTTAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY913361       <-- ATAATCGGTTGCGTACAGTAGAGGCAAAGTAGGGTGGCGAAGACGTTAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724216       <-- AGAATCGGTTGCGTACAGTAGAGGCAAAGTAGGGTGGCGAAGACGTTAGG  Raphanus sativus cv Early Scarlet Globe
EW732063       <-- AGAATCGGTTGCGTACAGTAGAGGCAAAGTAGGGTGGCGAAGACGTTAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD948294       <-- AGAATCGGTTGCGTACAGTAGAGGCAAAGTAGGGTGGCGAAGACGTTAGG  Raphanus sativus cv Early Scarlet Globe
EY897437       <-- AGAATCGGTTGCGTACAGTAGAGGCAA--AAGGGTGGCGAAGACGTTAGG  Raphanus raphanistrum subsp. maritimus
EX750400       <-- AGAATCGGTTGCGTACAGTAGAGGCAAAGTAGGGTGGCGAAGACGTTAGG  Raphanus raphanistrum subsp. maritimus
FD564866       --> ..................................................  Raphanus sativus var. oleiformis
EV539704       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW728815       --> AGAATCGGTTGCGTACAGTAGAGGCAAAGTAGGGTGGCGAAGACGTTAGG  Raphanus sativus cv Early Scarlet Globe
EX766829       --> ATAATCGGTTGCGTACAGTAGAGGCAAAGTAGGGTGGCGAAGACGTTAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909606       --> ATAATCGGTTGCGTACAGTAGAGGCAAAGTAGGGTGGCGAAGACGTTAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD944110       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX901156       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               701    -    751
UN23235        --> CCATACGAATAGTGTGTGGATGATTATGTTCACGTGGTTGTTGTGATAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534905       <-- CCATACGAATAGTGTGTGGATGATTATGTTCACGTGGTTGTTGTGATAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762606       <-- CCATACGAATAGTGTGTGGATGATTATGTTCACGTGGTTGTTGTGATAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY913361       <-- CCATACGAATAGTGTGTGGATGATTATGTTCACGTGGTTGTTGTGATAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724216       <-- CCATACGAACAGTGTGTGGATGATTATGTTCACGTGGTTGCTGTGATAAG  Raphanus sativus cv Early Scarlet Globe
EW732063       <-- CCATACGAACAGTGTGTGGATGATTATGTTCACGTGGTTGCTGTGATAAG  Raphanus sativus cv Rat-Tail Radish #3870
FD948294       <-- CCATACGAACAGTGTGTGGATGATTATGTTCACGTGGTTGCTGTGATAAG  Raphanus sativus cv Early Scarlet Globe
EY897437       <-- CCATACGAATAGTGTGTGGATGATTATGTTCACGTGGTTGTTGTGATAAG  Raphanus raphanistrum subsp. maritimus
EX750400       <-- CCATACGAATAGTGTGTGGATGATTATGTTCACGTGGTTGTTGTGATAAG  Raphanus raphanistrum subsp. maritimus
FD564866       --> ..................................................  Raphanus sativus var. oleiformis
EV539704       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW728815       --> CCATACGAACAGTGTGTGGATGATTATGTTCACGTGGTTGCTGTGATAAG  Raphanus sativus cv Early Scarlet Globe
EX766829       --> CCATACGAATAGTGTGTGGATGATTATGTTCACGTGGTTGTTGTGATAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909606       --> CCATACGAATAGTGTGTGGATGATTATGTTCACGTGGTTGTTGTGATAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD944110       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX901156       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               751    -    801
UN23235        --> CTCCGTAGAAGGCGAAATGCTTCTCTAGATCGAGTAAACCGTTACGGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534905       <-- CTCCGTAGAAGGCGAAATGCTTCTCTAGATCGAGTAAACCGATACGGTT.  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762606       <-- CTCCGTAGAAGGCGAAATGCTTCTCTAGATCGAGTAAACCGATACGGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY913361       <-- CTCCGTAGAAGGCGAAATGCTTCTCTAGATCGAGTAAACCGATACGGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724216       <-- CTCCGTAGAAGGCGAAATGCTTCTCTAGATCGAGTAAACCGTTACGGTTG  Raphanus sativus cv Early Scarlet Globe
EW732063       <-- CTCCGTAGAAGGCGAAATGCTTCTCTAGATCGAGTAAACCGTTACGGTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD948294       <-- CTCCGTAGAAGGCGAAATGCTTCTCTAGATCGAGTAAACCGTTACGGTTG  Raphanus sativus cv Early Scarlet Globe
EY897437       <-- CTCCGTAGAAGGCGAAATGCTTCTCTAGATCGAGTAAACCGTTGCGGTTG  Raphanus raphanistrum subsp. maritimus
EX750400       <-- CTCCGT............................................  Raphanus raphanistrum subsp. maritimus
FD564866       --> ..................................................  Raphanus sativus var. oleiformis
EV539704       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW728815       --> CTCCGTAGAAGGCGAAATGCTTCTCTAGATCGAGTAAACCGTTACGGTTG  Raphanus sativus cv Early Scarlet Globe
EX766829       --> CTCCGTAGAAGGCGAAATGCTTCTCTAGATCGAGTAAACCGa........  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909606       --> CTCCGTAGAAAGCGAAATGCTTCTCTAGATCGAGTAAACCGATACG-TTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD944110       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX901156       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               801    -    851
UN23235        --> CTCATGATTTTTTAAGGTTTCGGACAACTTTCTATGTTATTGTCGGAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534905       <-- ..................................................
EX762606       <-- CTCATGATTTTTTAAGGTTTCGGACcc.......................
EY913361       <-- CTCATGATTTTTTAAGGTTTCGGACAACTTTCTATcc.............
EW724216       <-- CTCATGATTTTTTAAGGTTTCGGACAACTTTCTATGTTATT.........
EW732063       <-- CTCATGATTTTTTAAGGTTTCGGACAACTTTCTATGTTATTGTCGGcc..
FD948294       <-- CTCATGATTTTTTAAGGTTTCGGACAACTTTCTATGTTATTGTCGGAAGG
EY897437       <-- CTCATGATTTTTTAAGGTTTCGGACAGCTTTCTATcc.............
EX750400       <-- ..................................................
FD564866       --> ..................................................
EV539704       --> ..................................................
EW728815       --> CTCATGATTTTTTAAGGTTTCGGACAACTTTCTATGTTATTGTC......
EX766829       --> ..................................................
EY909606       --> CTCATGATT.........................................
FD944110       --> ..................................................
EX901156       --> ..................................................

               851    -    901
UN23235        --> AAAAAAAGAAAAGCAGGGCAGGGAGAAGAAAGGAGAAGACTTTTTATGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534905       <-- ..................................................
EX762606       <-- ..................................................
EY913361       <-- ..................................................
EW724216       <-- ..................................................
EW732063       <-- ..................................................
FD948294       <-- AAAAAAAGAAAAGCAGGGCAGGGAGAAGAAAGGAGAAGACTTTTTATGAA
EY897437       <-- ..................................................
EX750400       <-- ..................................................
FD564866       --> ..................................................
EV539704       --> ..................................................
EW728815       --> ..................................................
EX766829       --> ..................................................
EY909606       --> ..................................................
FD944110       --> ..................................................
EX901156       --> ..................................................

               901    -    951
UN23235        --> ACC
                   ~~~
EV534905       <-- ...
EX762606       <-- ...
EY913361       <-- ...
EW724216       <-- ...
EW732063       <-- ...
FD948294       <-- ACC
EY897437       <-- ...
EX750400       <-- ...
FD564866       --> ...
EV539704       --> ...
EW728815       --> ...
EX766829       --> ...
EY909606       --> ...
FD944110       --> ...
EX901156       --> ...