RadishBase

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Alignment for radish unigene UN23281

               1      -     51
UN23281        --> TTTCAATAGTTGTTTTATTATATTAAGAAGAGAAA--AAAAAACTAATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432810       <-- ..................................................
FD946103       <-- ..................................................
EV549550       <-- ..................................................
FD579044       <-- ..................................................
FD986930       <-- ..................................................
FD982123       <-- ..................................................
EY923403       <-- ..................................................
FD940807       <-- ..................................................
EY907359       <-- ..................................................
FD986663       <-- ..................................................
FD954052       <-- ..................................................
EY897493       <-- ..................................................
FD583097       --> TTTCAATAGTTGTTTTATTATATTAAGAAGAGAAA--AAAAAACTAATTA
EX759221       --> ...CAATAGTTGTTTTATTATATTAAGAAGAGAAA--AAAAAACTAATTA
FD983082       --> ...CAATAGTTGTGTTATTATATTAAGAAGAGAAAGAAAAAAACTAATTG
FD950377       --> ............................gagaAAA--AAAAAACTAATTA
FD982877       --> ..................................A--AAAAAACTAATTG
EY893801       --> ......................................AAAAACTAATTG
EY919196       --> ......................................AAAAACTAATTG
FD936601       --> .............................................gATTA
EV545002       --> ..................................................
FD553733       --> ..................................................
EX891647       --> ..................................................

               51     -    101
UN23281        --> ACAGACTAGACAGAATTTTCTCAGAAACATAAGACAGATTAGTCATAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432810       <-- ..................................................
FD946103       <-- ..................................................
EV549550       <-- ..................................................
FD579044       <-- ..................................................
FD986930       <-- ..................................................
FD982123       <-- ..................................................
EY923403       <-- ..................................................
FD940807       <-- ..................................................
EY907359       <-- ..................................................
FD986663       <-- ..................................................
FD954052       <-- ..................................................
EY897493       <-- ..................................................
FD583097       --> ACTGACTAGACAGAATTTTC-CAGAAACATAAGACAGATTAGTCATAGAA
EX759221       --> ACAGACTAGACAGAATTTTC-CAGAAACATAAGACAGATTAGTCATAGAA
FD983082       --> ACAGACTAGACAGAATATTCTCAGAAACATAAGACAGATTAGTCATAGAA
FD950377       --> ACAGACTAGACAGAATTTTC-CAGAAACATAAGACAGATTAGTCATAGAA
FD982877       --> ACAGACTAGACAGAATATTCTCAGAAACATAAGACAGATTAGTCATAGAA
EY893801       --> ACAGACTAGACAGAATATTCTCAGAAACATAAGACAGATTAGTCATAGAA
EY919196       --> ACAGACTAGACAGAATATTCTCAGAAACATAAGACAGATTAGTCATAGAA
FD936601       --> ACAGACTAGACAGAATTTTC-CAGAAACATAAGACAGATTAGTCATAGAA
EV545002       --> ...................gTCAGAAACATAAGACAGATTAGTCATAGAA
FD553733       --> .....................cgGAAACATAAGACAGATTAGTCATAGAA
EX891647       --> ....................ttaaAAACATAAGACAGATTAGTCATAGAA

               101    -    151
UN23281        --> TTTAAACATTAACAGCAAAATAAAATAAAATAAAAAA-GCACAAAGACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432810       <-- ..................................................
FD946103       <-- ..................................................
EV549550       <-- ..................................................
FD579044       <-- ..................................................
FD986930       <-- ..................................................
FD982123       <-- ..................................................
EY923403       <-- ..................................................
FD940807       <-- ..................................................
EY907359       <-- ..................................................
FD986663       <-- ..................................................
FD954052       <-- ..................................................
EY897493       <-- ..................................................
FD583097       --> TTTAAACATTAACAGCAAAATAAAATAAAATAAAAAAAGCACAAAGACAT
EX759221       --> TTTAAACATTAACAGCAAAATA---TAAATAAAAAAA-GCACAAAGACAT
FD983082       --> TTTAAACATTAACAGCAAAATAAAATAAAATAAAAAG-GCACAAAGACAT
FD950377       --> TTTAAACATTAACAGCAAAATAAAATAAAATAAAAAAAGCACAAAGACAT
FD982877       --> TTTAAACATTAACAGCAAAATAAAATAAAATAAAAAA-GCACAAAGACAT
EY893801       --> TTTAAACATTAACAGCAAAATAAAATAAAATAAAAAA-GCACAAAGACAT
EY919196       --> TTTAAACATTAACAGCAAAATAAAATAAAATAAAAAA-GCACAAAGACAT
FD936601       --> TTTAAACATTAACAGCAAAATAAAATAAAATAAAAAA-GCACAAAGACAT
EV545002       --> TTTAAACATTAACAGCAAAATAAAATAAAATAAAAAA-GCACAAAGACAT
FD553733       --> TTTAAACATTAACAGCAAAATAAAATAAAATAAAAAAAGCACAAAGACAT
EX891647       --> TTTAAACATTAACAGCAAAATAAAATAAAATAAAAAA-GCACAAAGACAT

               151    -    201
UN23281        --> AACTAACTGCAAAGCTGTCTAAATCCCATTAAGACTACACAATCAAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432810       <-- ..................................................
FD946103       <-- ..................................................
EV549550       <-- ..................................................
FD579044       <-- ..................................................
FD986930       <-- ..................................................
FD982123       <-- ..................................................
EY923403       <-- ..................................................
FD940807       <-- ..................................................
EY907359       <-- ..................................................
FD986663       <-- ..................................................
FD954052       <-- ..................................................
EY897493       <-- ..................................................
FD583097       --> AACTAACTGCAAAGCTGTCTAAATCCCATTAAGACTACACAATCAAAAGC
EX759221       --> AACTAACTGCAAAGCTGTCTAAATCCCATTAAGACTACACAATCAAAAGC
FD983082       --> AACTAACTGCAAAGCTGTCTAAATCCCATTAAGACTACACAATCAAAAGC
FD950377       --> AACTAACTGCAAAGCTGTCTAAATCCCATTAAGACTACACAATCAAAAGC
FD982877       --> AACTAACTGCAAAGCTGTCTAAATCCCATTAAGACTACACAATCAAAAGC
EY893801       --> AACTAACTGCAAAGCTGTCTAAATCCCATTAAGACTACACAATCAAAAGC
EY919196       --> AACTAACTGCAAAGCTGTCTAAATCCCATTAAGACTACACAATCAAAAGC
FD936601       --> AACTAACTGCAAAGCTGT-----TCCCATTAAGACTACACAATCAAAAGC
EV545002       --> AACTAACTGCAAAGCTGTCTAAATCCCATTAAGACTACACAATCAAAAGC
FD553733       --> AACTAACTGCAAAGCTGTCTAAATCCCATTAAGACTACACAATCAAA-GC
EX891647       --> AACTAACTGCAAAGCTGT-----TCCCATTAAGACTACACAATCAAAAGC

               201    -    251
UN23281        --> CTTTTT-GGTTCTTCTTCTCC-TTCTCCTCA--CAACTGTGAAAACTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432810       <-- .......................tcctcatA--CAACTGTGAAAACTTTA  Raphanus sativus cv GSK3-1
FD946103       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV549550       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579044       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD986930       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD982123       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923403       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD940807       <-- ..................................................  Raphanus sativus var. oleiformis
EY907359       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD986663       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD954052       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY897493       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583097       --> CTTTTT-GGTTCTTCTTCTCC-TTCTCCTCA--CAACTGTGAAAACTTTA  Raphanus sativus cv Rat-Tail Radish #3870
EX759221       --> CTTTTT-GGTTCTTCTTCTCC-TTCTCCTCA--CAACTGTGAAAACTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD983082       --> CTTTTT-GGTTCTTCTTCTCCCTTCTCCTCA--CAACTGTGAAAACTTTA  Raphanus raphanistrum subsp. landra
FD950377       --> CTTTTT-GGTTCTTCTTCTCC-TTCTCCTCA--CAACTGTGAAAACTCTA  Raphanus sativus cv Rat-Tail Radish #3870
FD982877       --> CTTTTT-GGTTCTTCTTCTCCCTTCTCCTCA--CAACTGTGAAAACTTTA  Raphanus raphanistrum subsp. landra
EY893801       --> CTTTTT-GGTTCTTCTTCTCCCTTCTCCTCA--CAACTGTGAAAACTTTA  Raphanus raphanistrum subsp. maritimus
EY919196       --> CTTTTT-GGTTCTTCTTCTCCCTTCTCCTCA--CAACTGTGAAAACTTTA  Raphanus raphanistrum subsp. landra
FD936601       --> CTTTTTTGGTTCTTCTTCTTC-TCCTCCTCATACAACTGTGAAAACTTTA  Raphanus sativus var. oleiformis
EV545002       --> CTTTTT-GGTTCTTCTTCTCCCTTCTCCTCA--CAACTGTGAAAACTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553733       --> CTTTTT-GGTTCTTCTTCTCCCTTCTCCTCA--CAACTGTGAAAACTTTA  Raphanus raphanistrum subsp. landra
EX891647       --> CTTTTTTGGTTCTTCTTCTTC-TCCTCCTCATACAACTGTGAAAACTTTA  Raphanus sativus var. oleiformis

               251    -    301
UN23281        --> TCCT-CTTTCACAGTCCCTACTGTTATTATCAC--CTTCATTTCAAGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432810       <-- TCCT-CTTTCACAGTCCCTACTGTTATTATCAC--CTTCATTTCAAGCTC  Raphanus sativus cv GSK3-1
FD946103       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV549550       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579044       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD986930       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD982123       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923403       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD940807       <-- ..................................................  Raphanus sativus var. oleiformis
EY907359       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD986663       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD954052       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY897493       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583097       --> TCCT-CTTTCACAGTCCCTACTGTTATTATCACACCTTCA-TTCAAGCTC  Raphanus sativus cv Rat-Tail Radish #3870
EX759221       --> TCCTTCTTTCACAGTCCCTACTGTTATTATCAC--CTTCATTTCAAGCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD983082       --> TCCT-CTTTCACAGTCCCTACTGTTATTACCAC--TTTCATT-CAAGCTC  Raphanus raphanistrum subsp. landra
FD950377       --> TCCT-CTTTCACAGTCCCTACTGTTATTATCACACCTTCA-TTCAAGCTC  Raphanus sativus cv Rat-Tail Radish #3870
FD982877       --> TCCT-CTTTCACAGTCCCTACTGTTATTACCAC--TTTCATT-CAAGCTC  Raphanus raphanistrum subsp. landra
EY893801       --> TCCT-CTTTCACAGTCCCTACTGTTATTACCAC--TTTCATT-CAAGCTC  Raphanus raphanistrum subsp. maritimus
EY919196       --> TCCT-CTTTCACAGTCCCTACTGTTATTACCAC--TTTCATT-CAAGCTC  Raphanus raphanistrum subsp. landra
FD936601       --> TCCT-CTTTCACAGTCCCTACTGTTATTATCAC--CTTCATTTCAAGCTC  Raphanus sativus var. oleiformis
EV545002       --> TCCT-CTTTCACAGTCCCTACTGTTATTACCAC--TTTCATT-CAAGCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553733       --> TCCT-CTTTCACAGTCCCTA..............................  Raphanus raphanistrum subsp. landra
EX891647       --> TCCT-CTTTCACAGTCCCTACTGTTATTATCAC--CTTCATTTCAAGCTC  Raphanus sativus var. oleiformis

               301    -    351
UN23281        --> TCATCTTCTTGCTGGTACTGCAAGTCGGACACTTGTAGTGTTTGATGTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432810       <-- TCATCTTCTTGCTGGTACTGCAAGTCGGACACTTGTAGTGTTTGATGTGC
FD946103       <-- ...............................CTTGTAGTGTTTGATGTGC
EV549550       <-- ..................................................
FD579044       <-- ..................................................
FD986930       <-- ..................................................
FD982123       <-- ..................................................
EY923403       <-- ..................................................
FD940807       <-- ..................................................
EY907359       <-- ..................................................
FD986663       <-- ..................................................
FD954052       <-- ..................................................
EY897493       <-- ..................................................
FD583097       --> TCATCTTCTTGCTGGTACTGCAAGTCGGACACTTGTAGTGTTTGATGTGC
EX759221       --> TCATCTTCTTGCTGGTACTGCAAGTCGGACACTTGTAGTGTTTGATGTGC
FD983082       --> ACATCTTCTTGCTGGTACTGCAAGTCGGACACTTGTAGTGTTTGATGTGC
FD950377       --> TCATCTTCTTGCTGGTACTGCAAGTCGGACACTTGTAGTGTTTGATGTGC
FD982877       --> TCATCTTCTTGCTGGTACTGCAAGTCGGACACTTGTAGTGTTTGATGTGC
EY893801       --> TCATCTTCTTGCTGGTACTGCAAGTCGGACACTTGTAGTGTTTGATGTGC
EY919196       --> TCATCTTCTTGCTGGTACTGCAAGTCGGACACTTGTAGTGTTTGATGTGC
FD936601       --> TCATCTTCTTGCTGGTACTGCAAGTCGGACACTTGTAGTGTTTGATGTGC
EV545002       --> TCATCTTCTTGCTGGTACTGCAAGTCGGAAACTTGTAGTGTTTGATGTGC
FD553733       --> ..................................................
EX891647       --> TCATCTTCTTGCTGGTACTGCAAGTCGGACACTTGTAGTGTTTGATGTGC

               351    -    401
UN23281        --> TCAGCCTTGGCGGGTGTGATCTTCACGCATTTTCCATGGAACCATTTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432810       <-- TCAGCCTTGGCAGGTGTGATCTTCACGCATTTTCCATGGAACCATTTCTC  Raphanus sativus cv GSK3-1
FD946103       <-- TCAG--CTGGCAGGTGTGATCTTCACACATTT-CCATGGAACCATT-CTC  Raphanus sativus cv Early Scarlet Globe
EV549550       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579044       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD986930       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD982123       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923403       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD940807       <-- ..................................................  Raphanus sativus var. oleiformis
EY907359       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD986663       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD954052       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY897493       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583097       --> TCAGCCTTGGCAGGGGTGATCTTCACACATTTTCCGTGGAACCATTTCTC  Raphanus sativus cv Rat-Tail Radish #3870
EX759221       --> TCAGCCTTGGCGGGTGTGATCTTCACGCATTTTCCATGGAACCATTTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD983082       --> TCAGCCTTGGCGGGTGTGATCTTCACGCATTTTCCATGGAACCATTTCTC  Raphanus raphanistrum subsp. landra
FD950377       --> TCAGCCTTGGCAGGTGTGATCTTCACACATTTTCCGTGGAACCATTTCTC  Raphanus sativus cv Rat-Tail Radish #3870
FD982877       --> TCAGCCTTGGCGGGTGTGGTCTTCACGCATTTTCCATGGAATCATTTCTC  Raphanus raphanistrum subsp. landra
EY893801       --> TCAGCCTTGGCGGGTGTGATCTTCACGCATTTTCCATGGAACCATTTCTC  Raphanus raphanistrum subsp. maritimus
EY919196       --> TCAGCCTTGGCGGGTGTGATCTTCACGCATTTTCCATGGAACCATTTCTC  Raphanus raphanistrum subsp. landra
FD936601       --> TCAGCCTTGGCAGGTGTGATCTTCACACATTTTCCATGGAACCATTTCTC  Raphanus sativus var. oleiformis
EV545002       --> TCAGCCTTGGCGGGTGTGATCTTCACGCATTTTCCATGGAACCATTTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553733       --> ..................................................  Raphanus raphanistrum subsp. landra
EX891647       --> TCAGCCTTGGCAGGTGTGATCTTCACACATTTTCCATGGAACCATTTCTC  Raphanus sativus var. oleiformis

               401    -    451
UN23281        --> ACAAGCGTCACAACATATCCAGAAGTCATCATAGTTCTCTCCACACGCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432810       <-- ACAAGCATCGCAACATATCCAGAAGTCATCATAGTTCTCTCCACACGCAC  Raphanus sativus cv GSK3-1
FD946103       <-- ACAAGCGTCACA-CATATCCAGAAGTCATCATAGT-CTCTCCACACGCAT  Raphanus sativus cv Early Scarlet Globe
EV549550       <-- .....caTCACAACATATCCAGAAGTCATCATAGTTCTCTCCACACGCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579044       <-- .............CATATCCAGAAGTCATCATAGT-CTCTCCACACGCAC  Raphanus sativus cv Rat-Tail Radish #3870
FD986930       <-- ......................................CTCCACACGCAC  Raphanus raphanistrum subsp. landra
FD982123       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923403       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD940807       <-- ..................................................  Raphanus sativus var. oleiformis
EY907359       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD986663       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD954052       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY897493       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583097       --> ACAAGCGTCACAACATATCCAGAAGTCATCATAGTTCTCTCCACACGCAC  Raphanus sativus cv Rat-Tail Radish #3870
EX759221       --> ACAAGCGTCACAACATATCCAGAAGTCATCATAGTTCTCTCCACACGCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD983082       --> ACAAGCATCACAACATATCCAGAAGTCATCATAGTTCTCTCCACACGCAC  Raphanus raphanistrum subsp. landra
FD950377       --> ACAAGCGTCACAACATATCCAGAAGTCATCATAGTTCTCTCCACACGCAC  Raphanus sativus cv Rat-Tail Radish #3870
FD982877       --> ACAAGCATCACAACATATCCAGAAGTCATCATAGTTCTCTCCACACGCAC  Raphanus raphanistrum subsp. landra
EY893801       --> ACAAGCATCACAACATATCCAGAAGTCATCATAGTTCTCTCCACACGCAC  Raphanus raphanistrum subsp. maritimus
EY919196       --> ACAAGCATCACAACATATCCAGAAGTCATCATAGTTCTCTCCACACGCAC  Raphanus raphanistrum subsp. landra
FD936601       --> ACAAGCGTCACAACATATCCAGAAGTCATCATAGTTCTCTCCACACGCAC  Raphanus sativus var. oleiformis
EV545002       --> ACAAGCATCACAACATATCCAGAAGTCATCATAGTTCTCTCCACACGCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553733       --> ..................................................  Raphanus raphanistrum subsp. landra
EX891647       --> ACAAGCGTCGCAACATATCCAGAAGTCATCATAGTTCTCTCCACACGCAC  Raphanus sativus var. oleiformis

               451    -    501
UN23281        --> CACAAACCGCACCTT-GTTCATCATCTTCCTCGTCTTCTCCGCTCTCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432810       <-- CACAAACCGCACCTT-GTTCATCATCTTCCTCATCTTCTCCGCTCTCATC  Raphanus sativus cv GSK3-1
FD946103       <-- CACAAACAGCAC-TT-GTTCATCATCT-CCTCGTCTTCTCCGCTCTCATC  Raphanus sativus cv Early Scarlet Globe
EV549550       <-- CACAAACCGCACCTTTGCTCATCATCTTCCTCATCTTCTCCGCTCTCATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579044       <-- CACAAACAGCAC-TT-GTTCATCATCTTCCTCGTCTTCTCCGCTCTCATC  Raphanus sativus cv Rat-Tail Radish #3870
FD986930       <-- CACAAACCGCAC-TT-GTTCATCATCT-CCTCATCTTCTCCGCTCTCATC  Raphanus raphanistrum subsp. landra
FD982123       <-- ..................cCATCATCTTCCTCGTCTTCTCCGCTCTCATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923403       <-- ......................catcatctctcatcTCTCCGCTCTCATC  Raphanus raphanistrum subsp. landra
FD940807       <-- ..................................................  Raphanus sativus var. oleiformis
EY907359       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD986663       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD954052       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY897493       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583097       --> CACAAACAGCACCTT-GTTCATCATCTTCCTCGTCTTCTCCGCTCTCATC  Raphanus sativus cv Rat-Tail Radish #3870
EX759221       --> CACAAACCGCACCTT-GCTCATCATCTTCCTCGTCTTCTCCGCTCTCATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD983082       --> CACAAACCGCACCTT-GTTCATCATCTTCCTCATCTTCTCCGCTCTCATC  Raphanus raphanistrum subsp. landra
FD950377       --> CACAAACAGCACCTT-GTTCATCATCTTCCTCGTCTTCTCCGCTCTCATC  Raphanus sativus cv Rat-Tail Radish #3870
FD982877       --> CACAAACCGCACCTT-GTTCATCATCTTCCTCATCTTCTCCGCTCTCATC  Raphanus raphanistrum subsp. landra
EY893801       --> CACAAACCGCACCTT-GTTCATCATCTTCCTCATCTTCTCCGCTCTCATC  Raphanus raphanistrum subsp. maritimus
EY919196       --> CACAAACCGCACCTT-GTTCATCATCTTCCTCATCTTCTCCGCTCTCATC  Raphanus raphanistrum subsp. landra
FD936601       --> CACAAACAGCACCTT-GTTCATCATATTCCTCGTCTTCTCCGCTCTCATC  Raphanus sativus var. oleiformis
EV545002       --> CACAAACCGCACCTT-GCTCATCATCTTCCTCATCTTCTCCGCTCTCATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553733       --> ..................................................  Raphanus raphanistrum subsp. landra
EX891647       --> CACAAACAGCACCTT-GTTCATCATCTTCCTCGTCTTCTCCGCTCTCATC  Raphanus sativus var. oleiformis

               501    -    551
UN23281        --> ATCTTCTCTTGGTGGTGGAGACATCTTTGAAGCCTTGGTGTGAGACTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432810       <-- ATCTTCTCTTGGTGGTGGAGACATCTTTGAAGCCTTAGTGTGAGACTCAG
FD946103       <-- ATCTTCTCTTGGTGGTGGAGACATCTTTGAGGCCTTGGTGTGAGACTCAG
EV549550       <-- ATCTTCTCTTGGTGGTGGAGACATCTTTGAAGCCTTGGTGTGAGACTCAG
FD579044       <-- ATCTTCTCTTGGTGGTGGAGACATCTTTGAAGCCTTGGTGTGAGACTCAG
FD986930       <-- ATCTTCTCTTGGTGGTGGAGGCATCTTTGAAGC-TTGGTGTGAGACTCAG
FD982123       <-- ATCTTCTCTTGGTGGTGGAGACATCTTTGAAGCCTTGGTGTGAGACTCAG
EY923403       <-- ATCTTCTCTTGGTGGTGGAGACATCTTTGAAGCCTTGGTGTGAGACTCAG
FD940807       <-- ..................................TTGGTGTGAGACTCAG
EY907359       <-- .....................................GTGTGAGACTCAG
FD986663       <-- .....................................GTGTGAGACTCAG
FD954052       <-- ..................................................
EY897493       <-- ..................................................
FD583097       --> ATCTTCTCTTGGTGGTGGAGACATCTTTGAAGCCTTGGTGTGAGACTC..
EX759221       --> ATCTTCTCTTGGTGGTGGAGACATCTTTGAAGCCTTGGTGTGAGACTCAG
FD983082       --> ATCTTCTCTTGGTGGTGGAGGCATCTTTGAAGCCTTGGTGTGAGACTCAG
FD950377       --> ATCTTCTCTTGGTGGTGGAGACATCTTTGAAGCCTTGGTGTGAGACTCAG
FD982877       --> ATCTTCTCTTGGTGGTGGA--CATCTTTGAAGCCTTGGTGTGAGACTCAG
EY893801       --> ATCTTCTCTTGGTGGTGGAGACATCTTTGAAGTCTTGGTGTGAGACTCAG
EY919196       --> ATCTTCTCTTGGTGGTGGAGACATCTTTGAAGCCTTGGTGTGAGACTCAG
FD936601       --> ATCTTCTCTTGGTGGTGGAGACATCTTTGAAGCCTTGGTGTGAGACTCAG
EV545002       --> ATCTTCTCTTGGTGGTGGAGACATCTTTGAAGCCTTGGTGTGAGACTCAG
FD553733       --> ..................................................
EX891647       --> ATCTTCTCTTGGTGGTGGAGACATCTTTGAAGCCTTGGTGTGAGACTCAA

               551    -    601
UN23281        --> ATTGACGAGGCTTGACACCACTAGGTTTGCTTCTGCTACTGTTGTTGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432810       <-- ATTGACGAGGCTTGACACCAGTAGGTTTGCTTCTGCTACTGTTGTTGTGG
FD946103       <-- ATTGACGAGGCTTGACACCACTAGGTTTGCTTCTGCTACTGTTGTTGTGG
EV549550       <-- ATTGACGAGG-GTGACACCACTAGGTTTGCTTCTGCTACTGTTGTTGTGG
FD579044       <-- ATTGACGAGGCTTGACACCACTAGGTTTGCTTCTGCTACTGTTGTTGTGG
FD986930       <-- ATTGACGAGGCTTGACACCACTAGGTTTGCTTCTGCTACTGTTGTTGTGG
FD982123       <-- ATTGACGAGGCTTGACACCACTAGGTTTGCTTCTGCTACTGTTGTTGTGG
EY923403       <-- ATTGACGAGGCTTGACACCACTAGGTTTGCTTCTGCTACTGTTGTTGTGG
FD940807       <-- ATTGACGAGGCTTGACACCACTAGGTTTGCTTCTGCTACTGTTGTTGTGG
EY907359       <-- ATTGACGAGGCTTGACACCACTAGGTTTGCTTCTGCTACTGTTGTTGTGG
FD986663       <-- ATTGACGAGGCTTGACACCACTAGGTTTGCTTCTGCTACTGTTGTTGTGG
FD954052       <-- .....................................ACTGTTGTTGTGG
EY897493       <-- ..................................................
FD583097       --> ..................................................
EX759221       --> ATTGACGAGGCTTGACACCACTAGGTTTGCTTCTGCTACTGTTGTTGTGG
FD983082       --> ATTGACGAGGCTTGACACCACTAGGTTTGCTTCTGCTACTGTTGTTGTGG
FD950377       --> ATTGACGAGGCTTGACACCACTAGGTTTGCTTCTGCTACTGTTGTTGTGG
FD982877       --> ATTGACGAGGCTTGACACCACTAGGTTTGCTTCTGCTA............
EY893801       --> ATTGACGAGGCTTGACACCACTAGGTTTGCTTCTGCTACTGTTGTTGTGG
EY919196       --> ATTGACGAGGCTTGACACCACTAGGTTTGCTTCTGCTACTGTTGTTGTGG
FD936601       --> ATTGACGAGGCTTGACACCACTAGGTTTGCTTCTGCTACTGTTGTTGTGG
EV545002       --> ATTGACGAGG-GTGACACCACTAGGTTTGCTTCTGCTACTGTTGTTGTGG
FD553733       --> ..................................................
EX891647       --> ATTGACGAGGCTTGACACCACTAGGTTTGCTTCTGCTACTGTTGTTGTGG

               601    -    651
UN23281        --> TTAGCAGATTGGTCTTTCGATTGCTTTGCATTGCCAGTTATAACCTCGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432810       <-- TTAGCAGATTGGTCCTTGGATTGCTTTGCATTGCCAGTTATAACCTCGAA  Raphanus sativus cv GSK3-1
FD946103       <-- TTAGCAGATTGGTCCTTGGATTGCTTTGCATTGCCAGTTATAACCTCGAA  Raphanus sativus cv Early Scarlet Globe
EV549550       <-- TTAGCAGAATGGTCTTTCGATTGCTTTGCGTTGCCAGTTATAACCTCGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579044       <-- TTAGCAGATTGGTCTTTCGATTGCTTTGCATTGCCAGTTATAACCTCGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD986930       <-- TTAGTAGATTGGTCTTTCGATTGCTTTGCATTGCCAGTTATAACCTCGAA  Raphanus raphanistrum subsp. landra
FD982123       <-- TTAGCAGATAGGTCCTTGGATTGCTTTGCATTGCCAGTTATGACCTCGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923403       <-- TTAGCAGATTGGTCTTTCGATTGCT-----TTGCCAGTTATAACCTCGAA  Raphanus raphanistrum subsp. landra
FD940807       <-- TTAGCAGATTGGTCCTTGGATTGCTTTGCATTGCCAGTTATAACCTCGAA  Raphanus sativus var. oleiformis
EY907359       <-- TTAGCAGATTGGTCCTTGGATTGCTTTGCATTGCCAGTTATAACCTCGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD986663       <-- TTAGCAGATTGGTCTTTCGATTGCTTTGCATTGCCAGTTATAACCTCGAA  Raphanus raphanistrum subsp. landra
FD954052       <-- TTAGCAGATTGGTCTTTCGATTGCTTTGCATTGCCAGTTATAACCTCGAA  Raphanus sativus cv Rat-Tail Radish #3870
EY897493       <-- ...................................AGTTATAACCTCGAA  Raphanus raphanistrum subsp. maritimus
FD583097       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX759221       --> TTAGCAGATTGGTCCTTGGATTGCTTTGCATTGCCAGTTATAACCTCGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD983082       --> TTAGTAGATTGGTCTTTCGATTGCTTTGCATTGCCAGTTATAACCTCGAA  Raphanus raphanistrum subsp. landra
FD950377       --> TTAGCAGATTGGTCTTTCGATTGCTTTGCATTGCCAGTTATAACCTCGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD982877       --> ..................................................  Raphanus raphanistrum subsp. landra
EY893801       --> TTAGCAGATTGGTCTTTCGATTGCTTTGCATTGCCAGTTATAACCTCGAA  Raphanus raphanistrum subsp. maritimus
EY919196       --> TTAGCAGATTGGTCTTTCGATTGCTTTGC-----CAGTTATAACCTCGAA  Raphanus raphanistrum subsp. landra
FD936601       --> TTAGCAGATTGGTCCTTGGATTGCTTTGCATTGCCAGTTATAACCTCGAA  Raphanus sativus var. oleiformis
EV545002       --> TTAGCAGAATGGTCTTTCGATTGCTTTGCGTTGCCAGTTATAACCTCGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553733       --> ..................................................  Raphanus raphanistrum subsp. landra
EX891647       --> TTAGCAAATTGGTCCTTGGATTGCTTTGCATTGCCAGTTATAACCTCGAA  Raphanus sativus var. oleiformis

               651    -    701
UN23281        --> AAGGGTTGGGAGATCATTTATCATCTGGAAAAGCCTCTTCCTCTCGTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432810       <-- CAGGGTTGGGAGATCATTAATCATCTGGAAAAGCCTCTTCCTCTCGTTTT  Raphanus sativus cv GSK3-1
FD946103       <-- AAGGGTTGGGAGATCATTTATCATCTGGAAGAGCCTCTTCCTCTCGTTTT  Raphanus sativus cv Early Scarlet Globe
EV549550       <-- AAGGGTTGGGAGATCATTTATCATCTGGAAAAGCCTCTTCCTCTCGTTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579044       <-- AAGGGTTGGGAGATCATTTATCATCTGGAAAAGCCTTTTCCTCTCGTTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD986930       <-- AAGGGTTGGGAGATCATTTATCATCTGGAAAAGCCTCTTCCTCTCGTTTT  Raphanus raphanistrum subsp. landra
FD982123       <-- AAGGGTTGGCAGATCATTTATCATCTGGAAGAGCCTCTTCCTCTCGTTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923403       <-- AAGGGTTGGGAGATCATTTATCATCTGGAAAAGCCTCTTCCTCTCGTTTT  Raphanus raphanistrum subsp. landra
FD940807       <-- AAGGGTTGGGAGATCATTTATCATCTGGAAGAGCCTCTTCCTCTCGTTTT  Raphanus sativus var. oleiformis
EY907359       <-- AAGGGTTGGGAGATCATTTATCATCTGGAAGAGCCTCTTCCTCTCGTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD986663       <-- AAGGGTTGGGAGATCATTTATCATCTGGAAAAGCCTCTTCCTCTCGTTTT  Raphanus raphanistrum subsp. landra
FD954052       <-- AAGGGTTGGGAGATCATTTATCATCTGGAAAAGCCTCTTCCTCTCGTTTT  Raphanus sativus cv Rat-Tail Radish #3870
EY897493       <-- AAGGGTTGGGAGATCATTTATCATCTGGAAAAGCCTCTTCCTCTCGTTTT  Raphanus raphanistrum subsp. maritimus
FD583097       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX759221       --> AAGGGTTGGGAGATCATTTATCATCTGGAAGAGCCTCTTCCTCTCGTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD983082       --> AAGGGTTGGGAGATCATTTATCATCTGGAAAAGCCTCTTCCTCTCGTTTT  Raphanus raphanistrum subsp. landra
FD950377       --> AAGGGTTGGGAGATCATTTATCATCTGGAAAAGCCTCTTCCTCTCGTTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD982877       --> ..................................................  Raphanus raphanistrum subsp. landra
EY893801       --> AAGGGTTGGGAGATCATTTATCATCTGGAAA...................  Raphanus raphanistrum subsp. maritimus
EY919196       --> AAGGGTTGGGAGATCATTTATCATCTGGAAAAGCCTCTTCCTCTCGTTTT  Raphanus raphanistrum subsp. landra
FD936601       --> AAGGGTTGGGAGATCATTTATCATCTGGAAGAGCCTCTTCCTCTCGTTTT  Raphanus sativus var. oleiformis
EV545002       --> AAGGGTTGGGAGATCATTTATCATCTGGAAAAGCCTCTTCCTCTCGTTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553733       --> ..................................................  Raphanus raphanistrum subsp. landra
EX891647       --> AAGGGTTGGGAGATCATTTATCATCTGGAAGAGCCTCTTCCTCTCGTTTT  Raphanus sativus var. oleiformis

               701    -    751
UN23281        --> TACCAAACCCGAAACGGGCACCGAAGTAAAAGGCAACAGAGATGAGCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432810       <-- TACCAAACCCGAAACGTGCGCCGAAGTAAAAGGCAACAGAGATGAGCCAA
FD946103       <-- TACCAAACCCGAAACGGGCACCGAAGTAAAAGGCAACAGAGATGAGCCAA
EV549550       <-- TACCAAACCCGAAACGGGCACCGAAGCAAAAGGCAACAGAGATGAGCCAA
FD579044       <-- TACCAAACCCGAAACGGGCACCGAAGTAAAAGGCAACAGAGATAAGCCAA
FD986930       <-- TACCAAACCCGAAACGGGCACCGAAGTAAAAGGCAACAGAGATGAGCCAA
FD982123       <-- TACCAAACCCGAAACGAGCACCGAAGTAAAAGGCAACAGAGATGAGCCAT
EY923403       <-- TACCAAACCCGAAACGGGCACCGAAGTAAAAGGCAACAGAGATGAGCCAA
FD940807       <-- TACCAAACCCGAAACGGGCACCGAGGTAAAAGGCAACAGAGATGAGCCAA
EY907359       <-- TACCAAACCCGAAACGGGCACCGAAGTAAAAGGCAACAGAGATGAGCCAA
FD986663       <-- TACCAAACCCGAAACGGGCACCGAAGTAAAAGGCAACAGAGATGAGCCAA
FD954052       <-- TACCAAACCCGAAACGGGCACCGAAGTAAAAGGCAACAGAGATGAGCCAA
EY897493       <-- TACCAAACCCGAAACGGGCACCGAAGTAAAAGGCAACAGAGATGAGCCAA
FD583097       --> ..................................................
EX759221       --> TACCAAACCCGAAACGGGCACCGAAGTAAAAGGCAACAGAGATGAGCCAA
FD983082       --> TACCAAACCCGAAACGGGCACCGAAGTAAAAGGCAACAGAGATGAGCCAA
FD950377       --> TACCAAACCCGAAACGGGCACCGAAGTAAAAGGCAACAGAGATGAGCCAA
FD982877       --> ..................................................
EY893801       --> ..................................................
EY919196       --> TACCAAACCCGAAACGGGCACCGAAGTAAAAGGCAACAGAGATG......
FD936601       --> TACCAAACCCGAAACGGGCACCGAGGTAAAAGGCAACAGAGATGAGCCAA
EV545002       --> TACCAAACCCGAAACGGGCACCGAAGCAAAAGGCAACAGAGATGAGCCAA
FD553733       --> ..................................................
EX891647       --> TACCAAACCCGAAACGGGCACCGAAGTAAAAGGCAACAGAGATGAGCCAA

               751    -    801
UN23281        --> GAGTCACTGTGGACAGCAACCAAAGTAATCCAGTCTTTTTCAGGCATTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432810       <-- GAGTCACTGTGAACAGCAACCAAGGTAATCCAGTCTTTTTCAGGCATCCC  Raphanus sativus cv GSK3-1
FD946103       <-- GAGTCACTGTGGACAGCAACCAAAGTAATCCAGTCTTTTTCAGGCATCCC  Raphanus sativus cv Early Scarlet Globe
EV549550       <-- GAGTCACTGTGGACAGCAACCAAAGTAATCCAGTCTTTTTCAGGCATTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579044       <-- GAGTCACTGTGGACAGCAACCAAAGTAATCCAGTCTTTTTCAGGCATTCC  Raphanus sativus cv Rat-Tail Radish #3870
FD986930       <-- GAGTCACTGTGGACAGCAACCAAAGTAATCCAGTCTTTTTCAGGCATTCC  Raphanus raphanistrum subsp. landra
FD982123       <-- GAGTCGCTGTGGACAGCAACCAAAGTAATCCAGTCTTTTTCAGGCATCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923403       <-- GAGTCACTGTGGACAGCAACCAAAGTAATCCAGTCTTTTTCAGGCATTAC  Raphanus raphanistrum subsp. landra
FD940807       <-- GAGTCACTGTGGACAGCAACCAAAGTAATCCAGTCTTTTTCAGGCATCCC  Raphanus sativus var. oleiformis
EY907359       <-- GAGTCGCTGTGGACAGCAACCAAAGTAATCCAGTCTTTTTCAGGCATTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD986663       <-- GAGTCACTGTGGACAGCAACCAAAGTAATCCAGTCTTTTTCAGGCATTCC  Raphanus raphanistrum subsp. landra
FD954052       <-- GAGTCACTGTGGACAGCAACCAAAGTAATCCAGTCTTTTTCAGGCATTCC  Raphanus sativus cv Rat-Tail Radish #3870
EY897493       <-- GAGTCACTGTGGACAGCAACCAAAGTAATCCAGTCTTTTTCAGGCATTCC  Raphanus raphanistrum subsp. maritimus
FD583097       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX759221       --> GAGTCGCTGTGGACAGCAACCAAAGTAATCCAGTCT..............  Raphanus raphanistrum subsp. raphanistrum (MS)
FD983082       --> GAGTCACTGTGGACAGCAACCAA...........................  Raphanus raphanistrum subsp. landra
FD950377       --> GA................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD982877       --> ..................................................  Raphanus raphanistrum subsp. landra
EY893801       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY919196       --> ..................................................  Raphanus raphanistrum subsp. landra
FD936601       --> GAGTCACTGTGGACAGCAACCAAAGTAATCCAGTCTTTTTCAG-CATCCC  Raphanus sativus var. oleiformis
EV545002       --> GAGTCACTGTGGACAGCAACCAAAGTAATCCAGTCTTTTTCAGGCATTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553733       --> ..................................................  Raphanus raphanistrum subsp. landra
EX891647       --> GAGTCACTGTGGACAGCAACCAAAGTAATCCAGTCTTTT...........  Raphanus sativus var. oleiformis

               801    -    851
UN23281        --> GTTCCTTGCAAAGTTGATGCCTAAAGCTGGTTCAGGAAGCTCGGGAGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432810       <-- GTTCCTTGCAAAGTTGATGCCTAGAGCTGGTTCAGGGAGCTCGGGAGGGA
FD946103       <-- GTTCCTTGCAAAGTTGATGCCTAAAGCTGGTTCAGGAAGCTCGGGAGGGA
EV549550       <-- GTTCCTTGCAAAGTTGATGCCTAAAGCTGGTTCAGGAAGCTCGGGAGGGA
FD579044       <-- GTTCCTTGCAAAGTTGATGCCTAAAGCTGGTTCAGGAAGCTCGGGAGGGA
FD986930       <-- GTTCCTTGCAAAGTTGATGCCTAAAGCTGGTTCAGGAAGCTCGGGAGGGA
FD982123       <-- GTTCCTTGCAAAGTTGATGCCTAAAGCTGGTTCAGGAAGCTCGGGAGGGA
EY923403       <-- GTTCCTTGCAAAGTTGATGCCTAAAGCTGGTTCAGGAAGCTCGGGAGGGA
FD940807       <-- GTTCCTTGCAAAGTTGATGCCTAAAGCTGGTTCAGGAAGCTCGGGAGGGA
EY907359       <-- GTTCCTTGCAAAGTTGATGCCTAAAGCTGGTTCAGGAAGCTCGGGAGGGA
FD986663       <-- GTTCCTTGCAAAGTTGATGCCTAAAGCTGGTTCAGGAAGCTCGGGAGGGA
FD954052       <-- GTTCCTTGCAAAGTTGATGCCTAAAGCTGGTTCAGGAAGCTCGGGAGGGA
EY897493       <-- GTTCCTTGCAAAGTTGATGCCTAAAGCTGGTTCAGGAAGCTCGGGAGGGA
FD583097       --> ..................................................
EX759221       --> ..................................................
FD983082       --> ..................................................
FD950377       --> ..................................................
FD982877       --> ..................................................
EY893801       --> ..................................................
EY919196       --> ..................................................
FD936601       --> GTTCCTTGCAAAGTTGATGCCTAAAGCTGGTTCAG-AAGCTCGGGAGGGA
EV545002       --> GTTCCTTGCAAAGTTGATGCCTAAAGCTGGTTCAGGAAGCTCGGGAGGGA
FD553733       --> ..................................................
EX891647       --> ..................................................

               851    -    901
UN23281        --> CCTCATCGACAGGAAGGTTAACCTCCCATGTCTCGTTAGGAAGTCCATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432810       <-- CCTCATCCACAGGAAGGTTAACCTCCCATGTCTCGTTAGGAAGTCCATAA
FD946103       <-- CCTCATCGACAGGAAGGTTAACCTCCCATGTCTCGTTAGGAAGTCCATAA
EV549550       <-- CCTCATCGACAGGAAGGTTAACCTCCCATGTCTCGTTAGGAAGTCCATAA
FD579044       <-- CCTCATCGACAGGAAGGTTAACCTCCCATGTCTCGTTAGGAAGTCCATAA
FD986930       <-- CCTCATCGACAGGAAGGTTAACCTCCCATGTCTCGTTAGGAAGTCCATAA
FD982123       <-- CCTCATCGACAGGAAGGTTAACCTCCCATGTCTCGTTAGGAAGTCCATAA
EY923403       <-- CCTCATCGACAGGAAGGTTAACCTCCCATGTCTCGTTAG-AAGTCCATAA
FD940807       <-- CCTCATCGACAGGAAGGTTAACCTCCCATATCTCGTTAGGAAGTCCATAA
EY907359       <-- CCTCATCGACAGGAAGGTTAACCTCCCATGTCTCGTTAGGAAGTCCATAA
FD986663       <-- CCTCATCGACAGGAAGGTTAACCTCCCATGTCTCGTTAGGAAGTCCATAA
FD954052       <-- CCTCATCGACAGGAAGGTTAACCTCCCATGTCTCGTTAGGAAGTCCATAA
EY897493       <-- CCTCATCGACAGGAAGGTTAACCTCCCATGTCTCGTTAGGAAGTCCATAA
FD583097       --> ..................................................
EX759221       --> ..................................................
FD983082       --> ..................................................
FD950377       --> ..................................................
FD982877       --> ..................................................
EY893801       --> ..................................................
EY919196       --> ..................................................
FD936601       --> CCTCATCGACAGG.....................................
EV545002       --> CCTCATCGACAGGAAGGTTAACCTCCCATGTCTCGTTAGGAAGTCCATAA
FD553733       --> ..................................................
EX891647       --> ..................................................

               901    -    951
UN23281        --> AGACACAAGTTTTCCTTGTCAGGGTCACACTGGAGGTAAAACTGCTGCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432810       <-- AGACACAAGTTTTCCTTGTCAGGGTCACACTGAAGGTAAAACTGCTGCCC
FD946103       <-- AGACACAAGTTTTCCTTGTCAGGGTCACACTGGAGGTAAAACTGCTGCCC
EV549550       <-- AGACACAAGTTTTCCTTGTCAGGGTCACACTGGAGGTAAAACTGCTGCCC
FD579044       <-- AGACACAAGTTTTCCTTGTCAGGGTCACACTGGAGGTAAAACTGCTGCCC
FD986930       <-- AGACACAAGTTTTCCTTGTCAGGGTCACACTGGAGGTAAAACTGCTGCCC
FD982123       <-- AGACACAAGTTTTCCTTGTCAGGGTCACACTGAAGGTAAAACTGCTGCCC
EY923403       <-- AGACACAAGTTTTCCTTGTCAGGGTCACACTGGAGGTAAAACTGCTGCCC
FD940807       <-- AGACACAAGTTTTCCTTGTCAGGGTCACACTGGAGGTAAAACTGCTGCCC
EY907359       <-- AGACACAAGTTTTCCTTGTCAGGGTCACACTGGAGGTAAAACTGCTGCCC
FD986663       <-- AGACACAAGTTTTCCTTGTCAGGGTCACACTGGAGGTAAAACTGCTGCCC
FD954052       <-- AGACACAAGTTTTCCTTGTCAGGGTCACACTGGAGGTAAAACTGCTGCCC
EY897493       <-- AGACACAAGTTTTCCTTGTCAGGGTCACACTGGAGGTAAAACTGCTGCCC
FD583097       --> ..................................................
EX759221       --> ..................................................
FD983082       --> ..................................................
FD950377       --> ..................................................
FD982877       --> ..................................................
EY893801       --> ..................................................
EY919196       --> ..................................................
FD936601       --> ..................................................
EV545002       --> AGACACAAGTTTTCCTTGTCAGG-TCACACTGGAG-T-AAACTGCTGCCC
FD553733       --> ..................................................
EX891647       --> ..................................................

               951    -   1001
UN23281        --> ATCTGATGTGAGAGCCTTGAGGAGACCAGCTCTACGACCCTTAAAGTCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432810       <-- ATCTGATGTGAGAGCCTTGAGGAGACCAGCTCTACGACCCTTAAAGTCGC
FD946103       <-- ATCCGATGTGAGAGCCTTGAGGAGACCAGCTCTACGACCCTTAAAGTCGC
EV549550       <-- ATCTGATGTGAGAGCCTTGAGGAGACCAGCTCTACGACCCTTAAAGTCGC
FD579044       <-- ATCTGATGTGAGAGCCTTGAGGAGACCAGCTCTACGACCCTTAAAGTCGC
FD986930       <-- ATCTGATGTGAGAGCCTTGAGGAGACCAGCTCTACGACCCTTAAAGTCGC
FD982123       <-- ATCTGATGTGAGAGCTTTGAGGAGACCAGCTCTACGACCCTTAAAGTCGC
EY923403       <-- ATCTGATGTGAGAGCCTTGAGGAGACCAGCTCTACGACCCTTAAAGTCGC
FD940807       <-- ATCTGATGTGAGAGCCTTGAGGAGACCAGCTCTACGACCCTTAAAGTCGC
EY907359       <-- ATCTGATGTGAGAGCCTTGAGGAGACCAGCTCTACGACCCTTAAAGTCGC
FD986663       <-- ATCTGATGTGAGAGCCTTGAGGAGACCAGCTCTACGACCCTTAAAGTCGC
FD954052       <-- ATCTGATGTGAGAGCCTTGAGGAGACCAGCTCTACGACCCTTAAAGTCGC
EY897493       <-- ATCTGATGTGAGAGCCTTGAGGAGACCAGCTCTACGACCCTTAAAGTCGC
FD583097       --> ..................................................
EX759221       --> ..................................................
FD983082       --> ..................................................
FD950377       --> ..................................................
FD982877       --> ..................................................
EY893801       --> ..................................................
EY919196       --> ..................................................
FD936601       --> ..................................................
EV545002       --> ATCTGATGTGAGAGCCTTGAG-AGA-CAGCTCTACGACCCTTAAAGTCGC
FD553733       --> ..................................................
EX891647       --> ..................................................

               1001   -   1051
UN23281        --> TAAACACCTCTTCGACAGTGCGGTGGATAGGATTCTGTATTCCCTCCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432810       <-- TAAAGACCTCTTCGACAGTGCGGTGGATAGGATTCTGTATTCCCTCCATA
FD946103       <-- TAAAGACCTCTTCGACAGTGCGGTGGATAGGATTCTGTATTCCCTCCATA
EV549550       <-- TAAACACCTCTTCGACAGTGCGGTGGATAGGATTCTGTACTCCCTCCATA
FD579044       <-- TAAACACCTCTTCGACAGTGCGGTGGATAGGATTCTGTATTCCCTCCATA
FD986930       <-- TAAACACCTCTTCGACAGTGCGGTGGATAGGATTCTGTATTCCCTCCATA
FD982123       <-- TAAACACCTCTTCGACAGTGCGGTGGATAGGATTCTGTATTCCCTCCATA
EY923403       <-- TAAACACCTCTTCGACAGTGCGGTGGATAGGATTCTGTATTCCCTCCATA
FD940807       <-- TAAAGACCTCTTCGACAGTGCGGTAGATAGGATTCTGTATTCCCTCCATA
EY907359       <-- TAAAGACCTCTTCGACAGTGCGGTGGATAGGATTCTGTATTCCCTCCATA
FD986663       <-- TAAACACCTCTTCGACAGTGCGGTGGATAGGATTCTGTATTCCCTCCATA
FD954052       <-- TAAACACCTCTTCGACAGTGCGGTGGATAGGATTCTGTATTCCCTCCATA
EY897493       <-- TAAACACCTCTTCGACAGTGCGGTGGATAGGATTCTGTATTCCCTCCATA
FD583097       --> ..................................................
EX759221       --> ..................................................
FD983082       --> ..................................................
FD950377       --> ..................................................
FD982877       --> ..................................................
EY893801       --> ..................................................
EY919196       --> ..................................................
FD936601       --> ..................................................
EV545002       --> TAA...............................................
FD553733       --> ..................................................
EX891647       --> ..................................................

               1051   -   1101
UN23281        --> TCAATACGAATCAGCTTCGTTC-G-GA--AAATCACGCCGGCGGTGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432810       <-- TCAATATGAATCAGCTTCGTTCCGAGA--AAAACACGCCGGCGGTGAGAG
FD946103       <-- TCAATATGAATCAGCTTCGTTC-G-GACAAAAACACGCCGGCGGTGAGAG
EV549550       <-- TCAATACGAATCAGCTTCGTTC-G-GA--AAATCACGCCGGCGGTGAGAG
FD579044       <-- TCAATACGAATCAGCTTCGTTC-G-GA--AAATCACGCCGGCGGTGAGAG
FD986930       <-- TCAATACGAATCAGCTTCGTTC-G-GA--AAATCACGCCGGCGGTGAGAG
FD982123       <-- TCAATATGAA........................................
EY923403       <-- TCAATACGAATCAGCTTCGTTC-G-GA--AAATCACGCCGGCGGTGAGAG
FD940807       <-- TCAATATGAATCAGCTTCGTTC-G-GACAAAAACACGCCGGCGGTGAGAG
EY907359       <-- TCAATATGAATCAGCTTCGTTC-G-GAGAAAAACACGCCGGCGGTGAGAG
FD986663       <-- TCAATACGAATCAGCTTCGTTC-G-GA--AAATCACGCCGGCGGTGAGAG
FD954052       <-- TCAATACGAATCAGCTTCGTTC-G-GA--AAATCACGCCGGCGGTGAGAG
EY897493       <-- TCAATACGAATCAGCTTCGTTC-G-GA--AAATCACGCCGGCGGTGAGAG
FD583097       --> ..................................................
EX759221       --> ..................................................
FD983082       --> ..................................................
FD950377       --> ..................................................
FD982877       --> ..................................................
EY893801       --> ..................................................
EY919196       --> ..................................................
FD936601       --> ..................................................
EV545002       --> ..................................................
FD553733       --> ..................................................
EX891647       --> ..................................................

               1101   -   1151
UN23281        --> ACTGCGTCTGAGAAGAGA--AAAGCCAAGATCGGCTTTTTTTT--CTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432810       <-- AC................................................
FD946103       <-- ACTGCGTC-GAGAAGAGAGAAAAGCCAAGATCGGCTTTTTTTT--CTTTT
EV549550       <-- ACTGCGTCTGAGAAGAGA--AAAGCCAAGATCGGCTTTTTTTT--CTTTT
FD579044       <-- ACTGCGTCTGAGAAGAGA--AAAGCCAAGATCGGCTTTTTTTT--CTTTT
FD986930       <-- ACTGCGTCTGAGAAGAGA--AAAGCCAAGATCGGCTTTTTTTT-TCTTTT
FD982123       <-- ..................................................
EY923403       <-- ACTGCGTCTGAGAAGAGA--AAAGCCAAGATCGGCTTTTTTTTTTCTTTT
FD940807       <-- ACTGCGTC-GAGAAGAGAGAAAAGCCAAGATCGGCTTTTTTTT--CTTTT
EY907359       <-- ACTGCGTC-GAGAAGAGAGAAAAGCCAAGATCGGCTTTTTTTTTTCTTTT
FD986663       <-- ACTGCGTCTGAGAAGAGA--AAAGCCAAGATCGGCTTTTTTTTTTCTTTT
FD954052       <-- ACTGCGTCTGAGAAGAGA--AAAGCCAAGATCGGCTTTTTTTT--CTTTT
EY897493       <-- ACTGCGTCTGAGAAGAGA--AAAGCCAAGATCGGCTTTTTTTT-TCTTTT
FD583097       --> ..................................................
EX759221       --> ..................................................
FD983082       --> ..................................................
FD950377       --> ..................................................
FD982877       --> ..................................................
EY893801       --> ..................................................
EY919196       --> ..................................................
FD936601       --> ..................................................
EV545002       --> ..................................................
FD553733       --> ..................................................
EX891647       --> ..................................................

               1151   -   1201
UN23281        --> CCCTTTGGAGAGCAAATTTGTTTACTTTGTTTTTCGGACCC......
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432810       <-- ...............................................
FD946103       <-- CCCTTTGGAGAGCAAATTTGTTTc.......................
EV549550       <-- CCCTTTGGAGAGCAAATTTGTTTACTTTGTTTTTCGGACCC......
FD579044       <-- CCCTTTGGAGAGCAAGTTTGTTTACTTTGTTTTTCGGACagcc....
FD986930       <-- CCCTTTGGAGAGCAAATTTGTTTACTTTGTTTTTCGGACagagaccc
FD982123       <-- ...............................................
EY923403       <-- CCCTTTGGAGAGCAAATTTGTTTACTTTGTTTTTCGGACCC......
FD940807       <-- CCCTTTGGAGAGCAAATTTGTTTACTTTGTTTTTCGGACCC......
EY907359       <-- CCCCTTGGAGAGCAAATTTGTTTACTTTGTTATTCGGACCC......
FD986663       <-- CCCTTTGGAGAGCAAATTTGTTTACTTTGTTTTTCGGACac......
FD954052       <-- ACCTTTGGAGAGCAAGTTTGTTTACTTTGTTTTTCGGACCC......
EY897493       <-- CCCTTTGGAGAGCAAATTTGTTTccccccc.................
FD583097       --> ...............................................
EX759221       --> ...............................................
FD983082       --> ...............................................
FD950377       --> ...............................................
FD982877       --> ...............................................
EY893801       --> ...............................................
EY919196       --> ...............................................
FD936601       --> ...............................................
EV545002       --> ...............................................
FD553733       --> ...............................................
EX891647       --> ...............................................