RadishBase

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Alignment for radish unigene UN23300

               1      -     51
UN23300        --> GGGTTATTTTAAATTCAACAAAATCAATAGATAATTGATTATTTATACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898218       <-- ........TTAAATTCAACAAAATCAATAGATAATTGATTATTTATACAT
FD941317       <-- ..........................................TTATACAT
FD942025       <-- ..........................................TTATACAT
FY433386       <-- ..................................................
EV537332       <-- ..................................................
EV566250       <-- ..................................................
EV526905       <-- ..................................................
EX772246       <-- ..................................................
EV567630       <-- ..................................................
EV549994       <-- ..................................................
EY937660       <-- ..................................................
EY950421       <-- ..................................................
EX765411       <-- ..................................................
FD989217       <-- ..................................................
EY949581       <-- ..................................................
EY933929       --> GGGTTATTTTAAGTTCAACAAAATCAATAGATAATTGATTATTTATACAT
EV572532       --> ..........AAATTCAACAAAATCAATAGATAATTGATTATTTATACAT
EV531272       --> ..........................................TTATACAT
EV545362       --> ..........................................TTATACAT
EV571424       --> ..........................................TTATACAT
EX769199       --> ..........................................TTATACAT
FD545603       --> ..........................................TTATACAT
FD985031       --> ..........................................TTATACAT
EX751699       --> ............................................ATACAT
EX776243       --> ............................................ATACAT
EY893926       --> ............................................ATACAT
EY902026       --> ..................................................
EV531352       --> ..................................................
FD545212       --> ..................................................

               51     -    101
UN23300        --> AAAACAGAATCAT--CAAAGAGCTACAACATGTTCTCTTTGATCACAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898218       <-- AAAACAGAATCAT--CAAAGAGCTACAACATGTTCTCTTTGATCAAAACA  Raphanus raphanistrum subsp. maritimus
FD941317       <-- AAAACAGAATCAT--CAAAGAGCTACAACATGTTATCTTTGATCACAACA  Raphanus sativus var. oleiformis
FD942025       <-- AAAACAGAATCAT--CAAAGAGCTACAACATGTTATCTTTGATCACAACA  Raphanus sativus var. oleiformis
FY433386       <-- ..................................................  Raphanus sativus cv GSK3-1
EV537332       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566250       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV526905       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX772246       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV567630       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV549994       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937660       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY950421       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX765411       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989217       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY949581       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY933929       --> AAAACAGAATCAT--CAAAGAGCTACAACATGTTCTCTTTGATCACAACA  Raphanus sativus cv Early Scarlet Globe
EV572532       --> AAAACAGAATCAT--CAAAGAGCTACAACATGTTCTCTTTGATCAAAACA  Raphanus raphanistrum subsp. landra
EV531272       --> AAAACAGAATCAT--CAAAGAGCTACAACATGTTCTCTTTGATCAAAACA  Raphanus raphanistrum subsp. maritimus
EV545362       --> AAAACAGAATCAT--CAAAGAGCTACAACATGTTATCTTTGATCACAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571424       --> AAAACAGAATCAT--CAAAGAGCTACAACATGTTATCTTTGATCACAACA  Raphanus raphanistrum subsp. landra
EX769199       --> AAAACAGAATCAT--CAAAGAGCTACAACATGTTATCTTTGATCACAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545603       --> AAAACAGAATCAT--CAAAGAGCTACAACATGTTATCTTTGATCACAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985031       --> AAAACAGAATCAT--CAAAGAGCTACAAAATGTTATCTTTGATCACAACA  Raphanus raphanistrum subsp. landra
EX751699       --> AAAACAGAATCAT--CAAAGAGCTACAACATGTTCTCTTTGATCAAAACA  Raphanus raphanistrum subsp. maritimus
EX776243       --> AAAACAGAATCAT--CAAAGAGCTACGACATGTTCTCTTTGATCAAAACA  Raphanus raphanistrum subsp. landra
EY893926       --> AAAACAGAATCAT--CAAAGAGCTACAACATGTTCTCTTTGATCAAAACA  Raphanus raphanistrum subsp. maritimus
EY902026       --> .AAACAGAATCATATCAAAGAGCTACAACATGTTCTCTTTGATCAAAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531352       --> ........................................GATCACAACA  Raphanus raphanistrum subsp. maritimus
FD545212       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               101    -    151
UN23300        --> ACTTCATGACTAAGTTAAAACACAAAGATGAACTTTTAAGACTACAAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898218       <-- ACTTCATGACTAAGTTAAAACACAAAGATCGACTTTTAAGACTACAAATG
FD941317       <-- ACTTCATGACTAAGTTAAAACACAAAGATGAACTTTTAAGACTACAAATG
FD942025       <-- ACTTCATGACTAAGTTAAAACACAAAGATGAACTTTTAAGACTACAAATG
FY433386       <-- ..................................................
EV537332       <-- ..................................................
EV566250       <-- ..................................................
EV526905       <-- ..................................................
EX772246       <-- ..................................................
EV567630       <-- ..................................................
EV549994       <-- ..................................................
EY937660       <-- ..................................................
EY950421       <-- ..................................................
EX765411       <-- ..................................................
FD989217       <-- ..................................................
EY949581       <-- ..................................................
EY933929       --> ACTTCATGACTAAGTTAAAACACCAAGATCGACTTTTAAGACTACAAATG
EV572532       --> ACTTCATGACTAAGTTAAAACACAAAGATCGACTTTTAAGACTACAAATG
EV531272       --> ACTTCATGACTAAGTTAAAACACAAAGATCGACTTTTAAGACTACAAATG
EV545362       --> ACTTCATGACTAAGTTAAAACACAAAGATGAACTTTTAAGACTACAAATG
EV571424       --> ACTTCATGACTAAGTTAAAACACAAAGATGAACTTTTAAAACTACAAATG
EX769199       --> ACTTCATGACTAAGTTAAAACACAAAGATGAACTTTTAAGACTACAAATG
FD545603       --> ACTTCATGACTAAGTTAAAACACAAAGATGAACTTTTAAGACTACAAATG
FD985031       --> ACTTCATGACTAAGTTAAAACACAAAGATGAACTTTTAAGACTACAAATG
EX751699       --> ACTTCATGACTAAGTTAAAACACAAAGATCAACTTTTAAGACTACAAATG
EX776243       --> ACCTCATGACTAAGTTAAAACACAAAGATCGACTTTTAAGACTACAAATG
EY893926       --> ACTTCATGACTAAGTTAAAACACAAAGATCGACTTTTAAGACTACAAATG
EY902026       --> ACTTCATGACTAAGTTAAAACACAAAGATCGACTTTTAAGACTACAAATG
EV531352       --> ACTTCATGACTAAGTTAAAACACAAAGATGAACTTTTAAGACTACAAATG
FD545212       --> .............................GAACTTTTAAGACTACAAATG

               151    -    201
UN23300        --> GCGATGGTGTTGGCACTCAAGAGGAGTAACAGGAAACCTCGCAGCATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898218       <-- GCGATGGTGTTGGCACTCAAGAGGAGTAACAGGAAACCTCGCAGCATCAA
FD941317       <-- GCGATGGTGTT--GACTCAAGAGGAGTAACAGGAAACCTCGCAGCATCAA
FD942025       <-- GCGATGGTGTT--GACTCAAGAGGAGTAACAGGAAACCTCGCAGCATCAA
FY433386       <-- .......................................CGCAGCATCAA
EV537332       <-- ..................................................
EV566250       <-- ..................................................
EV526905       <-- ..................................................
EX772246       <-- ..................................................
EV567630       <-- ..................................................
EV549994       <-- ..................................................
EY937660       <-- ..................................................
EY950421       <-- ..................................................
EX765411       <-- ..................................................
FD989217       <-- ..................................................
EY949581       <-- ..................................................
EY933929       --> GCGATGGTGTTGGCACTCAAGAGGAGTAACAGGAAACCTCGCAGCATCAA
EV572532       --> GCGATGGTGTTGGCACTCAAGAGGAGTGACAGGAAACCTCGCAGCATCAA
EV531272       --> GCGATGGT--TGGCACTCAAGAGGAGTAACAGGAAACCTCGCAGCATCAA
EV545362       --> GCGATGGTGTTGGCACTCAAGAGGAGTAACAGGAAACCTCGCAGCATCAA
EV571424       --> GCGATGGTGTTGGCACTCAAGAGGAGTAACAGGAAACCTCGCAGCATCAA
EX769199       --> GCGATGGTGTTGGCACTCAAGAGGAGTAACAGGAAACCTCGCAGCATCAA
FD545603       --> GCGATGGTGTTGGCACTCAAGAGGAGTAACAGGAAACCTCGCAGCATCAA
FD985031       --> GCGATGGTGTTGGCACTCAAGAGGAGTAACAGGAAACCTCGCAGCATCAA
EX751699       --> GCGATGGTGTTGGCACTCAAGAGGAGTAACAGGAAACCTCGCAGCATCAA
EX776243       --> GCGATGGTGTTGGCACTCAAGAGGAGTGACAGGAAACCTCGCAACATCAA
EY893926       --> GCGATGGTGTTGGCACTCAAGAGGAGTAACAGGAAACCTCGCAGCATCAA
EY902026       --> GCGATGGTGTTGGCACTCAAGAGGAGTAACAGGAAACCTCGCAGCATCAA
EV531352       --> GCGATGGTGTTGGCACTCAAGAGGAGTAACAGGAAACCTCGCAGCATCAA
FD545212       --> GCGATGGTGTTGGCACTCAAGAGGAGTAACAGGAAACCTCGCAGCATCAA

               201    -    251
UN23300        --> AACAATAATCATAGATTATATGGTTAGCTCGAACCCAAATAAGCTGGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898218       <-- AACAATAATCATAGATTATATGGTTAGCTCGAACCCAAATAAGCTGGTGA  Raphanus raphanistrum subsp. maritimus
FD941317       <-- AACAATAATCATAGATTATATGGTTAGCTCGAACCCAAATAAGCTGGTGA  Raphanus sativus var. oleiformis
FD942025       <-- AACAATAATCATAGATTATATGGTTAGCTCGAACCCAAATAAGCTGGTGA  Raphanus sativus var. oleiformis
FY433386       <-- AACAATAATCATAGATTATATGGTTAGCTCGAACCCAAATAAGCTGGTGA  Raphanus sativus cv GSK3-1
EV537332       <-- ........TCATAAATTATATGGTTAGCTCGAACCCAAATCAGCTGGTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566250       <-- .............................................GGTGA  Raphanus raphanistrum subsp. landra
EV526905       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX772246       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV567630       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV549994       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937660       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY950421       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX765411       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989217       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY949581       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY933929       --> AACAATAATCATAAATTATATGGTTAGCTCGAACCCAAGTCAGCTGGTGA  Raphanus sativus cv Early Scarlet Globe
EV572532       --> AACAATAATCATAGATTATATGGTTAGCTCGAACCCAAATAAGCTGGTGA  Raphanus raphanistrum subsp. landra
EV531272       --> AACAATAATCATAGATTATATGGTTAGCTCGAACCCAAATAAGCTGGTGA  Raphanus raphanistrum subsp. maritimus
EV545362       --> AACAATAATCATAAATTATATGGTTAGCTCTAACCCAAATAAGCTGGTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571424       --> AACAATAATCATAGATTATATGGTTAGCTCGAACCCAAATAAGCTGGTGA  Raphanus raphanistrum subsp. landra
EX769199       --> AACAATAATCATAAATTATATGGTTAGCTCTAACCCAAATAAGCTGGTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545603       --> AACAATAATCATAAATTATATGGTTAGCTCTAACCCAAATAAGCTGGTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985031       --> AACAATAATCATAAATTATATGGTTAGCTCGAACCCAGATAAGCTGGTGA  Raphanus raphanistrum subsp. landra
EX751699       --> AACAATAATCATAGATTATATGGTTAGCTCGAACCCAAATAAGCTGGTGA  Raphanus raphanistrum subsp. maritimus
EX776243       --> AACAATAATCATAGATTATATGGTTAGCTCGAACCCAAATAAGCTGGTGA  Raphanus raphanistrum subsp. landra
EY893926       --> AACAATAATCATAGATTATATGGTTAGCTCGAACCCAAATAAGCTGGTGA  Raphanus raphanistrum subsp. maritimus
EY902026       --> AACAATAATCATAAATTATATGGTTAGCTCGAACCCAAATAAGTTGATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531352       --> AACAATAATCATAGATTATATGGTTAGCTCGAACCCAAATAAGCTGGTGA  Raphanus raphanistrum subsp. maritimus
FD545212       --> AACAATAATCATAGATTATATGGTTAGCTCGAACCCAAATAAGCTGGTGA  Raphanus raphanistrum subsp. raphanistrum (NY)

               251    -    301
UN23300        --> TTCTGATGAAGACTCAACTCAGACACAGTTGGCTCATCCCACCAGAATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898218       <-- TTCTGATGAAGACTCAACTCAGACACAGTTGGCTCATCCCACCAGAATCT
FD941317       <-- TTCTGATGAAGACTCAACTCAGACACAGTTGGCTCATCCCACCAGAATCT
FD942025       <-- TTCTGATGAAGACTCAACTCAGACACAGTTGGCTCATCCCACCAGAATCT
FY433386       <-- TTCTGATGAAGACTCAACTCAGACACAGTTGGCTCATCCCACCAGAATCT
EV537332       <-- CTCTGATGAAGACTCAACTCAGACACAGTTGGCTCATCCCACCAGAATCT
EV566250       <-- TTCTGATGAAGACTCAACTCAGACACAGTTGGCTCATCCCACCAGAATCT
EV526905       <-- ....GATGAAGACTCAACTCAGACACAGTTGGCTCATCCCACCAGAATCT
EX772246       <-- ..................................................
EV567630       <-- ..................................................
EV549994       <-- ..................................................
EY937660       <-- ..................................................
EY950421       <-- ..................................................
EX765411       <-- ..................................................
FD989217       <-- ..................................................
EY949581       <-- ..................................................
EY933929       --> TTCTGATGAAGACTCAACTCAGACACAGTTGGCTCGTCCCACCAGAATCT
EV572532       --> TTCTGATGAAGACTCAACTCAGACACAGTTGGCTCATCCCACCAGAATCT
EV531272       --> TTCTGATGAAGACTCAACTCAGACACAGTTGGCTCATCCCACCAGAATCT
EV545362       --> TTCTGATGAAGACTCAACTCAAACACAGTTGGCTCATCCCACCAGAATCT
EV571424       --> TTCTGATGAAAACTCAACTCAAACACAGTTGGCTCATCCCACCAAAATCT
EX769199       --> TTCTGATGAAGACTCAACTCAGACACAGTTGGCTCATCCCACCAGAATCT
FD545603       --> TTCTGATGAAGACTCAACTCAAACACAGTTGACTCATCCCACCAAAATCT
FD985031       --> TTCTGATGAAGACTCAACTCAGACACAGTTGGCTCATCCCACCAGAATCT
EX751699       --> TTCTGATGAAGACTCAACTCAGACACAGTTGGCTCATCCCACCAGAATCT
EX776243       --> TTCTGATGAAGACTCAACTCAGACACAGTTGGCTCATCCCACCAGAATCT
EY893926       --> TTCTGATGAAGACTCAACTCAGACACAGTTGGCTCATCCCACCAGAATCT
EY902026       --> TTCTGATGAAGACTCAACTCAGATACAGTTGGCTCATCCCACCAGAATCT
EV531352       --> TTCTGATGAAGACTCAACTCAGACACAGTTGGCTCATCCC--CAGAATCT
FD545212       --> TTCTGATGAAGACTCAACTCAGACACAGTTGGCTCATCCCACCAGAATCT

               301    -    351
UN23300        --> CTGGTCTTCTCCATTACACTTGCTTAGATCAGTTGTCGTCGGAACCTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898218       <-- CTGGTCTTCTCCATTACACTTGCTTAGATCAGTTGTCGTCGGAACCTCAC
FD941317       <-- CTGGTCTTCTCCATTACACTTGCTTAGATCAGTTGTTGTAGGAACCTCAC
FD942025       <-- CTGGTCTTCTCCATTACACTTGCTTAGATCAGTTGTTGTAGGAACCTCAC
FY433386       <-- CTGGTCTTCTCCATTACACTTGCTTAGATCAGTTGTCGTCGGAACCTCAC
EV537332       <-- CTGGTCTTCTCCATTGCACTTGCTTAGATCGGTTGTCGTCGGAACCTCAC
EV566250       <-- CTGGTCTTCTCCATTGCACTTGCTTAGATCAGTTGTCGTCGGAACCTCAC
EV526905       <-- CTGGTCTTCTCCATTACACTTGCTTAGATCAGTTGTCGTCGGAACCTCAC
EX772246       <-- ...................cTGCTTAGATCAGT-GTCGT-AGAA-CTCAC
EV567630       <-- ......................................taGGAACCTCAC
EV549994       <-- ................................................AC
EY937660       <-- ..................................................
EY950421       <-- ..................................................
EX765411       <-- ..................................................
FD989217       <-- ..................................................
EY949581       <-- ..................................................
EY933929       --> CTGGTCTTCTCCATTACACTTGCTTAGATCAGTTATCGTCGGAACCTCAC
EV572532       --> CTGGTCTTCTCCATTGCACTTGCTTAGATCAGTTGTCGTAGGAACCTCAC
EV531272       --> CTGGTCTTCTCCATTACACTTGCTTAGATCAGTTGTCGTCGGAACCTCAC
EV545362       --> CTGGTCT---CCATTACACTTGCTTAGATCAGTTGTCGTCGGAACCTCAC
EV571424       --> CTGGTCTTCTCCATTGCACTTGCTTAAATCAGTTGTCGTCGGAACCTCAC
EX769199       --> CTGGTCTTCTCCATTACACTTGCTTAGATCAGTTGTCGTCGGAACCTCAC
FD545603       --> CTGGTCTTCTCCATTACACTTGCTTAGATCAGTTGTCGTCGGAACCTCAC
FD985031       --> CTGGTCTTCTCCATTACACTTGCTTAGATCAGTTGTTGTCGGAACCTCAC
EX751699       --> CTGGTCTTCTCCATTACACTTGCTTAGATCAGTTGTCGTCGGAACCTCAC
EX776243       --> CCGGTCTTCTCCATTGCACTTGCTTAGATCAGTTGTCGTAGGAACCTCAC
EY893926       --> CTGGTCTTCTCCATTACACTTGCTTAGATCAGTTGTCGTCGGAACCTCAC
EY902026       --> CTGGTCTTCTCCATTACACTTGCTTAGATCAGTTGTCGTCGGAACCTCAC
EV531352       --> CTGGTCTTCTCCATTGCACTTGCTTAGATCAGTTGTCGTCGGGACCTCAC
FD545212       --> CTGGTCTTCTCCATTGCACTTGCTTAGATCAGTTGTCGTCGGAACCTCAC

               351    -    401
UN23300        --> AAGCATCAATCTTGAAATCTTTGTAAGAAGCAATGAAAGGAGCGTGACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898218       <-- AAGCATCAATCTTGAAATCTTTGTAAGAAGCAACGAAAGGAGCGTGACTC  Raphanus raphanistrum subsp. maritimus
FD941317       <-- AAGCATCAATCTTGAAATCTTTGTAAGAAGCAACGAAAGGAGCGTGACTC  Raphanus sativus var. oleiformis
FD942025       <-- AAGCATCAATCTTGAAATCTTTGTAAGAAGCAACGAAAGGAGCGTGACTC  Raphanus sativus var. oleiformis
FY433386       <-- AAGCATCAATCTTGAAATCTTTGTAAGAAGCAATGAAAGGAGCGTGACTC  Raphanus sativus cv GSK3-1
EV537332       <-- AAGCATCAATCTTGAAATCTTTGTAAGAAGCAATGAAAGGAGCGTGACTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566250       <-- AAGCATCAATCTTGAAATCTTTGTAAGAAGCAATGAAAGGAGCGTGACTC  Raphanus raphanistrum subsp. landra
EV526905       <-- AAGCATCAATCTTGAAATCTTTGTAAGAAGCAACGAAAGGAGCGTGACTC  Raphanus raphanistrum subsp. maritimus
EX772246       <-- AAGCATCAATCT-GAAATCTTTGTAAGA-GCAATGAAAGGAGCGTGACTC  Raphanus raphanistrum subsp. landra
EV567630       <-- AAGCATCAATCTTGAAATCTTTGTAAGAAGCAATGAAAGGAGCGTGACTC  Raphanus raphanistrum subsp. landra
EV549994       <-- AAGCATCAATCTTGAAATCTTTGTAAGAAGCAATGAAAGGAGCGTGACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937660       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY950421       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX765411       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989217       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY949581       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY933929       --> AAGCATCAATCTTGAAATCTTTGTAAGAAGCAATGAAAGGAGCGTGACTC  Raphanus sativus cv Early Scarlet Globe
EV572532       --> AAGCATCAATCTTGAAATCTTTGTAAGAAGCAATGAAAGGAGCGTGACTC  Raphanus raphanistrum subsp. landra
EV531272       --> AAGCATCAATCTTGAAATCTTTGTAAGAAGCAACGAAAGGAGCGTGACTC  Raphanus raphanistrum subsp. maritimus
EV545362       --> AAGCATCAATCTTGAAATCTTTGTAAGAAGCAATGAAAGGAGCGTGACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571424       --> AAGCATCAATCTTGAAATCTTTGTAAAAAGCAATGAAAGGAGCGTGACTC  Raphanus raphanistrum subsp. landra
EX769199       --> AAGCATCAATCTTGAAATCTTTGTAAGAAGCAATGAAAGGAGCGTGACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545603       --> AAGCATCAATCTTGAAATCTTTGTAAGAAGCAATGAGAGGAGCGTGACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985031       --> AAGCATCAATCTTGAAATCTTTGTAAGAAGCAATGAAAGGAGCGTGACTC  Raphanus raphanistrum subsp. landra
EX751699       --> AAGCATCAATCTTGAAATCTTTGTAAGAAGCAACGAAAGGAGCGTGACTC  Raphanus raphanistrum subsp. maritimus
EX776243       --> AAGCATCAATCTTGAAATCTTTGTAAGAAGCAATGAAAGGAGCGTGACTC  Raphanus raphanistrum subsp. landra
EY893926       --> AAGCATCAATCTTGAAATCTTTGTAAGAAGCAACGAAAGGAGCGTGACTC  Raphanus raphanistrum subsp. maritimus
EY902026       --> AAGCATCAATCTTGAAATCTTTGTAAGAAGCAATGAAAGGAGCGTGACTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531352       --> AAGCATCAATCTTGAAATCTTTGTAAGAAGCAATGAAAGGAGCGTGACTC  Raphanus raphanistrum subsp. maritimus
FD545212       --> AAGCATCAATCTTGAAATCTTTGTAAGAAGCAATGAAAGGAGCGTGACTC  Raphanus raphanistrum subsp. raphanistrum (NY)

               401    -    451
UN23300        --> CAATCTGTTTTCACAAGACCTCCTTGGGTTGCCCAGTCATCTGCATTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898218       <-- CAATCAGTGTTCACAAGACCTCCTTGGGTCGCCCAGTCATCTGCGTTCCA  Raphanus raphanistrum subsp. maritimus
FD941317       <-- CAATCAGTTTTCACAAGACCTCCTTGGGTCGCCCAGTCATCTGCGTTCCA  Raphanus sativus var. oleiformis
FD942025       <-- CAATCAGTTTTCACAAGACCTCCTTGGGTCGCCCAGTCATCTGCGTTCCA  Raphanus sativus var. oleiformis
FY433386       <-- CAATCTGTTTTCACAAGACCTCCTTGGGTTGCCCAGTCATCTGCATTCCA  Raphanus sativus cv GSK3-1
EV537332       <-- CAATCTGTTTTCACAAGACCTCCTTGTGTTGCCCAGTCATCCGCATTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566250       <-- CAATCTGTTTTCACAAGACCTCCTTGGGTCGCCCAGTCATCTGCGTTCCA  Raphanus raphanistrum subsp. landra
EV526905       <-- CAATCAGTTTTCACAAGACCTCCTTGGGTCGCCCAGTCATCTGCGTTCCA  Raphanus raphanistrum subsp. maritimus
EX772246       <-- CAATCTGTTT-CACAAGACCTCCTTGCG-TGCCCAGTCATCTGCATTCCA  Raphanus raphanistrum subsp. landra
EV567630       <-- CAATCTGTTTTCACAAGACCTCCTTGCGTTGCCCAGTCATCTGCATTCCA  Raphanus raphanistrum subsp. landra
EV549994       <-- CAATCTGTTTTCACAAGACCTCCTTGGGTTGCCCAGTCATCTGCATTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937660       <-- .........................GGGTTGCCCAGTCGTCTGCATTCCA  Raphanus sativus cv Early Scarlet Globe
EY950421       <-- ..........................cGTTGCCCAGTCATCTGCATTCCA  Raphanus sativus cv Rat-Tail Radish #3870
EX765411       <-- ............................TTGCCCAGTCATCTGCATTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989217       <-- ..............................GCCCAGTCATCTGCATTCCA  Raphanus raphanistrum subsp. landra
EY949581       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY933929       --> CAATCAGTTTTCACAAGACCTCCTTGGGTTGCCCAGTCGTCTGCATTCCA  Raphanus sativus cv Early Scarlet Globe
EV572532       --> CAATCTGTTTTCACAAGACCTCCTTGCGTTGCCCAGTCATCTGCATTCCA  Raphanus raphanistrum subsp. landra
EV531272       --> CAATCAGTTTTCACAAGACCTCCTTGGGTCGCCCAGTCATCTGCGTTCCA  Raphanus raphanistrum subsp. maritimus
EV545362       --> CAATCTGTTTTCACAAGACCTCCTTGGGTTGCCCAGTCATCTGCATTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571424       --> CAATCTGTTTTCACAAGACCTCCTTGGGTCGCCCAGTCATCTGCGTTCCA  Raphanus raphanistrum subsp. landra
EX769199       --> CAATCTGTTTTCACAAGACCTCCTTGGGTTGCCCAGTCATCTGCATTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545603       --> CAATCTGTTTTCACAAGACCTCCTTGGGTTGCCCAGTCATCTGCATTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985031       --> CAATCTGTTTTCACAAGACCTCCTTGGGTTGCCCAGTCATCTGCATTCCA  Raphanus raphanistrum subsp. landra
EX751699       --> CAATCAGTTTTCACAAGACCTCCTTGGGTCGCCCAGTCATCTGCGTTCCA  Raphanus raphanistrum subsp. maritimus
EX776243       --> CAATCTGTTTTCACAAGACCTCCTTGCGTTGCCCAGTCATCTGCATTCCA  Raphanus raphanistrum subsp. landra
EY893926       --> CAATCAGTTTTCACAAGACCTCCTTGGGTCGCCCAGTCATCTGCGTTCCA  Raphanus raphanistrum subsp. maritimus
EY902026       --> CAATCTGTTTTCACAAGACCTCCTTGGGTTGCCCAGTCATCTGCATTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531352       --> CAATCTGTTTTCACAAGACCTCCTTGGGTCGCCCAGTCATCTGCGTTCCA  Raphanus raphanistrum subsp. maritimus
FD545212       --> CAATCTGTTTTCACAAGACCTCCTTGGGTCGCCCAGTCATCTGCGTTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)

               451    -    501
UN23300        --> AATCGAACTGTACACTCCCATTGCTTGATCTTTAGCAAATGGGATGCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898218       <-- AATCGAACTGTACACTCCCATGGCTTGGTCTTTAGCAAATGGGATGCCTT  Raphanus raphanistrum subsp. maritimus
FD941317       <-- AATCGAACTGTACACTCCCATGGCTTGGTCTTTAGCAAATGGGATGCCTT  Raphanus sativus var. oleiformis
FD942025       <-- AATCGAACTGTACACTCCCATGGCTTGGTCTTTAGCAAATGGGATGCCTT  Raphanus sativus var. oleiformis
FY433386       <-- GATCGAACTGTACACTCCCATTGCTTGATCTTTAGCAAATGGGATACCTT  Raphanus sativus cv GSK3-1
EV537332       <-- AATCGAACTGTACACTCCCATTGCTTGATCTTTAGCAAATGGGATGCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566250       <-- GATCGAACTGTACACTCCCATTGCTTGATCTTTAGCAAATGGGATACCTT  Raphanus raphanistrum subsp. landra
EV526905       <-- AATCGAACTGTACACTCCCATGGCTTGGTCTTTAGCAAATGGGATGCCTT  Raphanus raphanistrum subsp. maritimus
EX772246       <-- AATCGAACTGTAGACTCCCATTGCTTGATCTTTAGCAAATGGGATGCCTT  Raphanus raphanistrum subsp. landra
EV567630       <-- AATCGAACTGTAGACTCCCATTGCTTGATCTTTAGCAAATGGGATGCCTT  Raphanus raphanistrum subsp. landra
EV549994       <-- AATCGAACTGTACACTCCCATGGCTTGGTCTTTAGCAAATGGGATGCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937660       <-- AATCGAACTGTACACTCCCATTGCTTGATCTTTAGCAAATGGGATGCCTT  Raphanus sativus cv Early Scarlet Globe
EY950421       <-- AATCGAACTGTACACTCCCATGGCTTGATCTTTAGCAAATGGGATGCCTT  Raphanus sativus cv Rat-Tail Radish #3870
EX765411       <-- AATCGAACTGTACACTCCCATGGCTTGGTCTTTAGCAAATGGGATGCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989217       <-- GATCGAACTGTACACTCCCATTGCTTGATCTTTAGCAAATGGGATGCCTT  Raphanus raphanistrum subsp. landra
EY949581       <-- AATCGAACTGTACACTCCCATGGCTTGATCTTTAGCAAATGGGATGCCTT  Raphanus sativus cv Rat-Tail Radish #3870
EY933929       --> AATCGAACTGTACACTCCCATTGCTTGATCTTTAGCAAATGGGATGCCTT  Raphanus sativus cv Early Scarlet Globe
EV572532       --> AATCGAACTGTAGACTCCCATTGCTTGATCTTTAGCAAATGGGATGCCTT  Raphanus raphanistrum subsp. landra
EV531272       --> AATCGAACTGTACACTCCCATGGCTTGGTCTTTAGCAAATGGGATGCCTT  Raphanus raphanistrum subsp. maritimus
EV545362       --> AATCGAACTGTACACTCCCATGGCTTGGTCTTTAGCAAATGGGATGCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571424       --> AATCGAACTGTACACTCCCATTGCTTGATCTTTAGCAAATGGGATACCTT  Raphanus raphanistrum subsp. landra
EX769199       --> AATCGAACTGTACACTCCCATGGCTTGGTCTTTAGCAAATGGGATGCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545603       --> AATCGAACTGTACACTCCCATGGCTTGGTCTTTAGCAAATGGGATGCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985031       --> GATCGAACTGTACACTCCCATTGCTTGATCTTTAGCAAATGGGATGCCTT  Raphanus raphanistrum subsp. landra
EX751699       --> AATCGAACTGTACACTCCCATGGCTTGGTCTTTAGCAAATGGGATGCCTT  Raphanus raphanistrum subsp. maritimus
EX776243       --> AATCGAACTGTAGACTCCCATTGCTTGATCTTTAGCAAATGGGATGCCTT  Raphanus raphanistrum subsp. landra
EY893926       --> AATCGAACTGTACACTCCCATGGCTTGGTCTTTAGCAAATGGGATGCCTT  Raphanus raphanistrum subsp. maritimus
EY902026       --> AATCGAACTGTAGACTCCCATTGCTTGGTATTTAGCAAATGGGATGCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531352       --> GATCGAACTGTACACTCCCATTGCTTGATCTTTAGCAAATGGGATACCTT  Raphanus raphanistrum subsp. maritimus
FD545212       --> GATCGAACTGTACACTCCCATTGCTTGATCTTTAGCAAATGGGATACCTT  Raphanus raphanistrum subsp. raphanistrum (NY)

               501    -    551
UN23300        --> TATCTTCAAGATTCTTGTGGACACGAATAGGAGTCTCATCTACCATAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898218       <-- TATCTTCAAGATTCTTGTGGACACGAATGGGAGTCTCATCCACCATAAAC  Raphanus raphanistrum subsp. maritimus
FD941317       <-- TATCTTCAAGATTCTTGTGGACACGAATGGGAGTCTCATCCACCATAAAC  Raphanus sativus var. oleiformis
FD942025       <-- TATCTTCAAGATTCTTGTGGACACGAATGGGAGTCTCATCCACCATAAAC  Raphanus sativus var. oleiformis
FY433386       <-- TATCTTCAAGATTCTTGTGGACACGAATGGGAGTCTCATCCACCATAAAC  Raphanus sativus cv GSK3-1
EV537332       <-- TATCTTCAAGATTCTTGTGGACA-GAATAGGAGTCTCATCCACCATAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566250       <-- TATCTTCAAGATTCTTGTGGACACGAATGGGAGTCTCATCCACCATAAAC  Raphanus raphanistrum subsp. landra
EV526905       <-- TATCTTCAAGATTCTTGTGGACACGAATGGGAGTCTCATCCACCATAAAC  Raphanus raphanistrum subsp. maritimus
EX772246       <-- TATCTTCAAGATTCTTGTGGACACGAATAGGAGTCTCATCTACCATAAAT  Raphanus raphanistrum subsp. landra
EV567630       <-- TATCTTCAAGATTCTTGTGGACACGAATAGGAGTCTCATCTACCATAAAT  Raphanus raphanistrum subsp. landra
EV549994       <-- TATCTTCAAGATTCTTGTGGACACGAATAGGAGTCTCATCTACCATAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937660       <-- TATCTTCAAGATTCTTGTGGACACGAATAGGAGTCTCATCTACCATGAAT  Raphanus sativus cv Early Scarlet Globe
EY950421       <-- TATCTTCAAGATTCTTGTGAACACGGATTGGTGTCTCATCTACCATAAAC  Raphanus sativus cv Rat-Tail Radish #3870
EX765411       <-- TATCTTCAAGATTCTTGTGGACACGAATAGGAGTCTCATCTACCATAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989217       <-- TATCTTCAAGATTCTTGTGGACACGAATAGGAGTCTCATCTACCATAAAT  Raphanus raphanistrum subsp. landra
EY949581       <-- TATCTTCAAGATTCTTGTGAACACGGATTGGTGTCTCATCTACCATAAAC  Raphanus sativus cv Rat-Tail Radish #3870
EY933929       --> TATCTTCAAGATTCTTGTGGACACGAATAGGAGTCTCATCTACCATGAAT  Raphanus sativus cv Early Scarlet Globe
EV572532       --> TATCTTCAAGATTCTTGTGGACACGAATAGGAGTCTCATCTACCATAAAT  Raphanus raphanistrum subsp. landra
EV531272       --> TATCTTCAAGATTCTTGTGGACACGAATGGGAGTCTCATCCACCATAAAC  Raphanus raphanistrum subsp. maritimus
EV545362       --> TATCTTCAAGATTCTTGTGGACACGAATAGGAGTCTCATCTACCATAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571424       --> TATCTTCAAGATTCTTGTGGACACGAATGGGAGTCTCATCCACCATAAAC  Raphanus raphanistrum subsp. landra
EX769199       --> TATCTTCAAGATTCTTGTGGACACGAATAGGAGTCTCATCTACCATAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545603       --> TATCTTCAAGATTCTTGTGGACACGAATAGGAGTCTCATCTACCATAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985031       --> TATCTTCAAGATTCTTGTGGACACGAATAGGAGTCTCATCTACCATAAAT  Raphanus raphanistrum subsp. landra
EX751699       --> TATCTTCAAGATTCTTGTGGACACGAATGGGAGTCTCATCCACCATAAAC  Raphanus raphanistrum subsp. maritimus
EX776243       --> TATCTTCAAGATTCTTGTGGACACGAATAGGAGTCTCATCTACCATAAAT  Raphanus raphanistrum subsp. landra
EY893926       --> TATCTTCAAGATTCTTGTGGACACGAATGGGAGTCTCATCCACCATAAAC  Raphanus raphanistrum subsp. maritimus
EY902026       --> TATCTTCAAGATTCTTGTGGACACGAATAGGAGTCTCATCTACCATGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531352       --> TATCTTCAAGATTCTTGTGGACACGAATGGGAGTCTCATCCACCATAAAC  Raphanus raphanistrum subsp. maritimus
FD545212       --> TATCTTCAAGATTCTTGTGGACACGAATGGGAGTCTCATCCACCATAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)

               551    -    601
UN23300        --> ACAACACTGCGTTTACTCCAGAGGATAGAGTAAGTGTGGAACTCAGTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898218       <-- ACAACACTGCGTTTACTCCAGAGGATAGAGTAAGTGTGGAACTCAGTAGT  Raphanus raphanistrum subsp. maritimus
FD941317       <-- ACAACACTGCGTTTACTCCAGAGGATAGAGTAGGTGTGGAACTCAGTAGT  Raphanus sativus var. oleiformis
FD942025       <-- ACAACACTGCGTTTACTCCAGAGGATAGAGTAGGTGTGGAACTCAGTAGT  Raphanus sativus var. oleiformis
FY433386       <-- ACAACACTGCGTTTACTCCAGAGGATAGAGTAAGTGTGGAACTCAGTAGT  Raphanus sativus cv GSK3-1
EV537332       <-- ACGACACTGCGTTTACTCCAGAGGATAGAGTAGGTGTGGAACTCAGTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566250       <-- ACAACACTGCGTTTACTCCAGAGGATAGAGTAAGTGTGGAACTCAGTGAT  Raphanus raphanistrum subsp. landra
EV526905       <-- ACAACACTGCGTTTACTCCAGAGGATAGAGTAAGTGTGGAACTCAGTAGT  Raphanus raphanistrum subsp. maritimus
EX772246       <-- ACAACACTGCGTTTACTCCAGAGGATAGAGTAGGTGTGGAACTCAGTGGT  Raphanus raphanistrum subsp. landra
EV567630       <-- ACAACACTGCGTTTACTCCAGAGGATAGAGTAGGTGTGGAACTCAGTGGT  Raphanus raphanistrum subsp. landra
EV549994       <-- ACAACACTGCGTTTACTCCAGAGGATAGAGTAAGTGTGAAACTCAGTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937660       <-- ACAACACTGCGTTTACTCCAGAGGATAGAGTAAGTGTGAAACTCAGTGGT  Raphanus sativus cv Early Scarlet Globe
EY950421       <-- ACGACACTGCGTTTACTCCAGAGGATAGAGTAGGTGTGGAACTCAGTGGT  Raphanus sativus cv Rat-Tail Radish #3870
EX765411       <-- ACAACACTGCGTTTACTCCAGAGGATAGAGTAAGTGTGAAACTCAGTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989217       <-- ACAACACTGCGTTTACTCCAGAGGATAGAGTAGGTGTGGAACTCAGTGGT  Raphanus raphanistrum subsp. landra
EY949581       <-- ACGACACTGCGTTTACTCCAGAGGATAGAGTAGGTGTGGAACTCAGTGGT  Raphanus sativus cv Rat-Tail Radish #3870
EY933929       --> ACAACACTGCGTTTACTC................................  Raphanus sativus cv Early Scarlet Globe
EV572532       --> ACAACACTGCGTTTACTCCAGAGGATAGAGTAGGTGTGGAACTCAGTGGT  Raphanus raphanistrum subsp. landra
EV531272       --> ACAACACTGCGTTTACTCCAGAGGATAGAGTAAGTGTGGAACTCAGTAGT  Raphanus raphanistrum subsp. maritimus
EV545362       --> ACAACACTGCGTTTACTCCAGAGGATAGAGTAAGTGTGAAACTCAGTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571424       --> ACAACACTGCGTTTACTCCAAAGGATAGAGTAAGTGTGGAACTCAGTGAT  Raphanus raphanistrum subsp. landra
EX769199       --> ACAACACTGCGTTTACTCCAGAGGATAGAGTAAGTGTGAAACTCAGTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545603       --> ACAACACTGCGTTTACTCCAGAGGATAGAGTAAGTGTGAAACTCAGTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985031       --> ACAACACTGCGTTTACTCCAGAGGATAGAGTAGGTGTGGAACTCAGTGGT  Raphanus raphanistrum subsp. landra
EX751699       --> ACAACACTGCGTTTACTCCAGAGGATAGAGTAAGTGTGGAACTCAGTAGT  Raphanus raphanistrum subsp. maritimus
EX776243       --> ACAACACTGCGTTTACTCCAGAGGATAGAGTAGGTGTGGAACTCAGTGGT  Raphanus raphanistrum subsp. landra
EY893926       --> ACAACACTGCGTTTACTCCAGAGGATAGAGTAAGTGTGGAACTCAGTAGT  Raphanus raphanistrum subsp. maritimus
EY902026       --> ACAACACTGCGTTTACTCCAGAGGA.........................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531352       --> ACAACACTGCGTTTACTCCAGAGGATAGAGTAAGTGTGGAACTCAGTGGT  Raphanus raphanistrum subsp. maritimus
FD545212       --> ACAACACTGCGTTCACTCCAGAGGATAGAGTAAGTGTGGAACTCAGTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)

               601    -    651
UN23300        --> GGGATCGAACCAAAGGTTGAGTCTTTGCTCTCTGTTTCCAACTCCGTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898218       <-- GGGATCGAACCAAAGGTTGAGTCTTTGCTCTCTGTTTCCAACTCCGTTCc
FD941317       <-- GGGATCGAACCAAAGGTTGAGTATTTGCTCTCTGTTTCCAACTCCGTTCA
FD942025       <-- GGGATCGAACCAAAGGTTGAGTATTTGCTCTCTGTTTCCAACTCCGTTCA
FY433386       <-- GGGATCGAACCAAAGGTTGAGTCTTTGCTCTCTGTTTCCAACTCCGTTCA
EV537332       <-- GGGATCGAACCAAAGGTTGAGTCTTTGCTCTCTGTTTCCAACTCCATTCA
EV566250       <-- GGGATCGAACCAAAGGTTGAGTCTTTGCTCTCTGTTTACAACTCCGTTCA
EV526905       <-- GGGATCGAACCAAAGGTTGAGTCTTTGCTCTCTGTTTCCAACTCCGTTCA
EX772246       <-- GGGATCGAACCAAAGGTTGAGTCTTTGCTCTCTGTTTCCAACTCCGTTCA
EV567630       <-- GGGATCGAACCAAAGGTTGAGTCTTTGCTCTCTGTTTCCAACTCCGTTCA
EV549994       <-- GGGATCGAACCAAAGGTTGAGTCTTTGCTCTCTGTTTCCAACTCCGTTCA
EY937660       <-- GGGATCGAACCAAAGGTTGAGTCTTTGCTCTCTGTTTCCAACTCCGTTCA
EY950421       <-- GGGATCGAACCAAAGGTTGAGTCTTTGCTCTCTGTTTCCAACTCCGTTCA
EX765411       <-- GGGATCGAACCAAAGGTTGAGTCTTTGCTCTCTGTTTCCAACTCCGTTCA
FD989217       <-- GGGATCGAACCAAAGGTTGAGTCTTTGCTCTCTGTTTCCAACTCCGTTCA
EY949581       <-- GGGATCGAACCAAAGGTTGAGTCTTTGCTCTCTGTTTCCAACTCCGTTCA
EY933929       --> ..................................................
EV572532       --> GGGATCGAACCAAAGGTTGAGTCTTTGCTCTCTGTTTCCAACTCCGTTCA
EV531272       --> GGGATCGAACCAAAGGTTGAGTCTTTGCTCTCTGTTTCCAACTCCGTTCA
EV545362       --> GGGATCGAACCAAAGGTTGAGTCTTTGCTCTCTGTTTCCAACTCCGTTCA
EV571424       --> GGGATCGAACCAAAGGTTGAGTCTTTGCTCTCTGTTTACAACTCCGTTCA
EX769199       --> GGGATCGAACCAAAGGTTGAGTCTTTGCTCTCTGTTTCCAACTCCGTTCA
FD545603       --> GGGATCGAACCAAAGGTTGAGTCTTTGCTCTCTGTTTCCAACTCCGTTCA
FD985031       --> GGGATCGAACCAAAGGTTGAGTCTTTGCTCTCTGTTTCCAACTCCGTTCA
EX751699       --> GGGATCGAACCAAAGGTTGAGTCTTTGCTCTCTGTTTCCAACTCCGTTCA
EX776243       --> GGGAACGAACCAAAGGTTGAGTCTTTGCTCTCTGTTTCCAACTCCGTTCA
EY893926       --> GGGATCGAACCAAAGGTTGAGTCTTTGCTCTCTGTTTCCAACTCCGTTCA
EY902026       --> ..................................................
EV531352       --> GGGATCGAACCAAAGGTTGAGTCTTTGTTCTCTGTTTCCAACTCCGTTCA
FD545212       --> GGGATCGAACCAAAGGTTGAGTCTTTGCTCTCTGTTTCCAACTCCGTTCA

               651    -    701
UN23300        --> CATAAACGTTTGTCTGGACTATGTAAGGCTCACCCGTTGTGTTACCTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898218       <-- ..................................................
FD941317       <-- CATAAACGTTTGTCTc..................................
FD942025       <-- CATAAACGTTTGTCTc..................................
FY433386       <-- CATAGACGTTTGTCTGGACTATGTAAGGCTCACCCGTTGTGTTACCTAAG
EV537332       <-- CATAGACGTTTGTCTGGACTATGTAAGGCTCACCCGTTGTGTTGCCTAAG
EV566250       <-- CATAAACGTTTGTCTGGACTATGTAAGGCTCACCCGTTGTGTTACCTAAG
EV526905       <-- CATAAACGTTTGTCTGGACTATGTAAGGCTCACCCGTTGTGTTACCTAAG
EX772246       <-- CATAGACGTTTGTCTGGACTATGTAAGGCTCACCCGTTGTGTTACCTAAG
EV567630       <-- CATAGACGTTTGTCTGGACTATGTAAGGCTCACCCGTTGTGTTACCTAAG
EV549994       <-- CATAAACGTTTGTCTGGACTATGTATGGCTCACCCGTTGTGTTACCTAAG
EY937660       <-- CATAGACGTTTGTCTGGACTATGTAAGGCTCACCCGTTGTGTTACCTAAG
EY950421       <-- CATAGACGTTTGTCTGGACTATGTAAGGCTCACCCGTTGTGTTACCTAAG
EX765411       <-- CATAAACGTTTGTCTGGACTATGTAAGGCTCACCCGTTGTGTTACCTAAG
FD989217       <-- CATAAACGTTTGTCTGGACTATGTAAGGCTCACCCGTTGTGTTACCTAAG
EY949581       <-- CATAGACGTTTGTCTGGACTATGTAAGGCTCACCCGTTGTGTTACCTAAG
EY933929       --> ..................................................
EV572532       --> CATAGACGTTTGTCTGGACTATGTAAGGCTCACCCGTTGTGTTACCTAAG
EV531272       --> CATAAACGTTTGTCTGGACTATGTAAGGCTCACCCGTTGTGTTACCTAAG
EV545362       --> CATAAACGTTTGTCTGGACTATGTATGGCTCACCCGTTGTGTTACCTAAG
EV571424       --> CATAAACGTTTGTCTGGACTATGTAAGGCTCACCCGTTGTGTTACCTAA.
EX769199       --> CATAAACGTTTGTCTGGACTATGTAAGGCTCACCCGTTGTGTTACCTAAG
FD545603       --> CATAAACGTTTGTCTGGACTATGTAAGGCTCACCCGTTGTGTTACCTAAG
FD985031       --> CATAAACGTTTGTCTGGACTATGTAAGGCTCACCCGTTGTGTTACCTAAG
EX751699       --> CATAAACGTTTGTCTGGACTATGTAAGGCTCACCCGTTGTGTTACCTAAG
EX776243       --> CATAGACGTTTGTCTGGACTATGTAAGGCTCACCCGTTGTGTTACCTAAG
EY893926       --> CATAAACATTTGTCTGGACTATGTAAGGCTCACCCGTTGTGTTACCTAAG
EY902026       --> ..................................................
EV531352       --> CATAAACGTTTGTCTGGACTATGTAAGGCTCACCCGTTGTGTTACCTAAG
FD545212       --> CATAAACGTTTGTCTGGACTATGTAAGGCTCACCCGTTGTGTTACCTAAG

               701    -    751
UN23300        --> AACTCGAAGTCAAACTCATTGTGGTTCGAACCTTCTGAAGACATGTAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898218       <-- ..................................................
FD941317       <-- ..................................................
FD942025       <-- ..................................................
FY433386       <-- AACTCAAAGTCAAACTCGTTGTGGTTCGAACCTTCTGAAGACATGTAGAA
EV537332       <-- AACTCGAAGTCAAACTCGTTGTGGTTTGAACCTTCCGAAGACATGTAGAA
EV566250       <-- AACTCGAAGTCAAACTCGTTGTGGTTCGAACCTTCTGAAGACATGTAGAA
EV526905       <-- AACTCAAAGTCAAACTCGTTGTGGTTCGAACCTTCTGAAGACATGTAGAA
EX772246       <-- AACTCGAAGTCAAATTCATTGTGGTTCGAACCTTCTGAAGACATGTAGAA
EV567630       <-- AACTCGAAGTCAAATTCATTGTGGTTCGAACCTTCTGAAGACATGTAGAA
EV549994       <-- AACTCGAAGTCAAACTCATTGTGGTTCGAACCTTCTGAAGACATGTAGAA
EY937660       <-- AACTCGAAGTCAAACTCATTGTGGTTCAAACCTTCTGAAGACATGTAGAA
EY950421       <-- AACTCAAAGTCAAACTCGTTGTGGTTCGAACCTTCTGAAGACATGTAGAA
EX765411       <-- AACTCGAAGCCAAACTCATTGTGGTTCGAACCTTCTGAAGACATGTAGAA
FD989217       <-- AACTCGAAGTCAAACTCATCGTGGTTCGAACCTTCTGAAGACATGTAGAA
EY949581       <-- AACTCAAAGTCAAACTCGTTGTGGTTCGAACCTTCTGAAGACATGTAGAA
EY933929       --> ..................................................
EV572532       --> AACTCGAAGTCAAATTCATTGTGGTTCGAACCTTCTGAAGACATGTAGAA
EV531272       --> AACTCAAAGTCAAACTCGTTGTGGTTCGAACCTTCTGAAGACATGTAGAA
EV545362       --> AACTCGAAGTCAAACTCATTGTGGTTCGAACCTTCTGAAGACATGTAGAA
EV571424       --> ..................................................
EX769199       --> AACTCGAAGCCAAACTCATTGTGGTTCGAACCTTCTGAAGACATGTAGAA
FD545603       --> AACTCGAAGT-AAACTCATTGTGGTTCGAACCTTCTGAAGACATGTAGAA
FD985031       --> AACTCGAAGTCAAACTCATCGTGGTTCGAACCTTCTGAAGACATGTAGAA
EX751699       --> AACTCAAAGTCAAACTCGTTGTGGTTCGAACCTTCTGAAGACATGTAGAA
EX776243       --> AACTCGAAGTCAAATTCATTGTGGTTCGAACCTTCTGAAGACATGTAGAA
EY893926       --> AACTCAAAGTCAAACTCGTTGTGGTTCGAACCTTCTGAAGACATGTAGAA
EY902026       --> ..................................................
EV531352       --> AACTCGAAGTCAAACTCGTTGTGGTTCGAACCTTCTGAAGACATGTAGAA
FD545212       --> AACTCGAAGTCAAACTCGTTGTGGTTCGAACCTTCTGAAGACATGTAGAA

               751    -    801
UN23300        --> AGCAGTGACGGTTCCTGCTGAGTCACCCTCCACGAGCTTAATCTGGATAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898218       <-- ..................................................
FD941317       <-- ..................................................
FD942025       <-- ..................................................
FY433386       <-- AGCAGTGACGGTTCCTGCTGAGTCACCCTCCACGAGCTTAATCTGGATAG
EV537332       <-- AGCAGTGACGGTTCCTGCTGAGTCACCCTCGACGAGCTTAATCTGGATAG
EV566250       <-- AGCAGTGACGGTTCCTGCTGAGTCACCCTCCACGAGCTTAATCTGGATAG
EV526905       <-- AGCAGTGACGGTTCCTGCTGAGTCACCCTCCACGAGCTTAATCTGGATAG
EX772246       <-- AGCAGCGACGGTTCCTGCTGAGTCACCCTCCACGAGCTTAATCTGGATAG
EV567630       <-- AGCAGTGACGGTTCCTGCTGAGTCACCCTCCACGAGCTTAATCTGGATAG
EV549994       <-- AGCAGTGACGGTTCCTGCTGAGTCACCCTCGACGAGCTTAATCTGGATAG
EY937660       <-- AGAAGTGACGGTTCCTGCTGAGTCACCCTCGACGAGCTTAATCTGGATAG
EY950421       <-- AGCAGTGACGGTTCCTGCTGAGTCACCCTCCACGAGCTTAATCTGGATAG
EX765411       <-- AGCAGTGACGGTTCCTGCTGAGTCACCCTCGACGAGCTTAATCTGGATAG
FD989217       <-- AGCAGTGACGGTTCCTGCTGAGTCACCCTCGACGAGCTTAATCTGGATAG
EY949581       <-- AGCAGTGACGGTTCCTGCTGAGTCACCCTCCACGAGCTTAATCTGGATAG
EY933929       --> ..................................................
EV572532       --> AGCAGTGACGGTTCCTGCTGAGTCACCCTCCACGAGCTTAATCTGGATAG
EV531272       --> AGCAGTGACGGTTCCTGCTGAGTCACCCTCCACGAGCTTAATCTGGATAG
EV545362       --> AGCAGTGACGGTTCCTGCTGAGTCACCCTCGACGA...............
EV571424       --> ..................................................
EX769199       --> AGCAGTGACGGTTCCTGCTGAGTCACCCTCGACGAGCTTAATCTGGATAG
FD545603       --> AGCAGT............................................
FD985031       --> AGCAGTGACGGTTCCTGCTGAGTCACCCTCGACGAGCTTAATCTGGATAG
EX751699       --> AGCAGT............................................
EX776243       --> AGCAGCGACGGTTCCTGCTGAGTCACCCTCCACGAGCTTAATCTGGATAG
EY893926       --> AGCAGT............................................
EY902026       --> ..................................................
EV531352       --> AGCAGTGACGGTTCCTGCTGAGTCACCCTCCACGAGCTTAATCTGGATAG
FD545212       --> AGCAGTGACGGTTCCTGCTGAGTCACCCTCCACGAGCTTAATCTGGATAG

               801    -    851
UN23300        --> AGACTTTACCAAACAAGTACTTGCTTCTCGATTCAAACCCAGCTCCAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898218       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD941317       <-- ..................................................  Raphanus sativus var. oleiformis
FD942025       <-- ..................................................  Raphanus sativus var. oleiformis
FY433386       <-- AGACTTTACCAAACAAGTACTTGCTTCTCGATTCAAACCCAGCTCCAGAG  Raphanus sativus cv GSK3-1
EV537332       <-- AGACTTTACCAAACAAGTACTTGCTTCTCGACTCGAACCCAGCTCCAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566250       <-- AGACTTTACCAAACAAGTACTTGCTTCTCGATTCAAACCCAGCTCCAGAG  Raphanus raphanistrum subsp. landra
EV526905       <-- AGACTTTACCAAACAAGTACTTGCTTCTCGATTCAAACCCAGCTCCAGAG  Raphanus raphanistrum subsp. maritimus
EX772246       <-- AGACTTTACCAAACAAGTACTTGCTTCTCGATTCAAACCCAGCTCCAGAG  Raphanus raphanistrum subsp. landra
EV567630       <-- AGACTTTACCAAACAAGTACTTGCTTCTCGATTCAAACCCAGCTCCAGAG  Raphanus raphanistrum subsp. landra
EV549994       <-- AGACTTTACCGAACAAGTACTTGCCTATCGACTCAAACCCAGCTCCAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937660       <-- AGACTTTACCAAACAAGTACTTGCCTATCGATTCAAACCCAGCTCCAGAG  Raphanus sativus cv Early Scarlet Globe
EY950421       <-- AGACTTTACCGAACAAGTACTTGCCTATCGACTCAAACCCAGCTCCAGAG  Raphanus sativus cv Rat-Tail Radish #3870
EX765411       <-- AGACTTTACCAAACAAGTACTTGCCTATCGACTCAAACCCAGCTCCAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989217       <-- AGACTTTACCGAACAAGTACTTGCCTATCGACTCAAACCCAGCTCCAGAG  Raphanus raphanistrum subsp. landra
EY949581       <-- AGACTTTACCGAACAAGTACTTGCCTATCGACTCAAACCCAGCTCCAGAG  Raphanus sativus cv Rat-Tail Radish #3870
EY933929       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV572532       --> AGACTTTACCAAACAAGTACTTGCTTCTCGATTCAAACCCAGCTCCAGAG  Raphanus raphanistrum subsp. landra
EV531272       --> AGACTTTACCAAACAAGTACTTGCTTCTCGATTCAA-CCCAGCTCCAGAG  Raphanus raphanistrum subsp. maritimus
EV545362       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571424       --> ..................................................  Raphanus raphanistrum subsp. landra
EX769199       --> AGACTTTACCAAACAAGTACTTGCCTATCGACTCAAAC............  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545603       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985031       --> AGACTTTACCGAACAAGTACTTGCCTATCGACTCAAACCCAGCTC.....  Raphanus raphanistrum subsp. landra
EX751699       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX776243       --> AGACTTT...........................................  Raphanus raphanistrum subsp. landra
EY893926       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY902026       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531352       --> AGACTTTACCAAACAAGTACTTGCTTCTCGATTCAAACCCAGCTCCGGAG  Raphanus raphanistrum subsp. maritimus
FD545212       --> AG................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               851    -    901
UN23300        --> GAGTTGTCAAGCTTGAGTTTTGTGACTTCCCCATCGTTGATACAATGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898218       <-- ..................................................
FD941317       <-- ..................................................
FD942025       <-- ..................................................
FY433386       <-- GAGTTGTCAAGCTTGAGTTTTGTGACTTCCCCATCGTTGATACAATGATC
EV537332       <-- GAGTTGTCAAGCTTGAGTTTTGTGACTTCCCCATCGTTGATACAATGATC
EV566250       <-- GAGTTGTCAAGCTTGAGTTTTGTGACTTCCCCATCGTTGATACAATGATC
EV526905       <-- GAGTTGTCAAGCTTGAGTTTTGTGACTTCCCCATCGTTGATACAATGATC
EX772246       <-- GAGTTGTCAAGCTTGAGTTTTGTGACTTCCCCATCGTTGATACAATGATC
EV567630       <-- GAGTTGTCAAGCTTGAGTTTTGTGACTTCCCCATCGTTGATACAATGATC
EV549994       <-- GAGTTGTCAAGCTTGAGTTTTGTGACTTCCCCATCGTTGATACAATGGTC
EY937660       <-- GAGTTGTCAAGCTTGAGTTTTGTGACTTCCCCATCGTTGACACAATGATC
EY950421       <-- GAGTTGTCAAGCTTGAGTTTTGTGACTTCCCCATCGTTGATACAATGATC
EX765411       <-- GAGTTGTCAAGCTTGAGTTTTGTGACTTCCCCATCGTTGATACAATGGTC
FD989217       <-- GAGTTGTCAAGCTTGAGTTTTGTGACTTCCCCATCGTTGATACAATGGTC
EY949581       <-- GAGTTGTCAAGCTTGAGTTTTGTGACTTCCCCATCGTTGATACAATGATC
EY933929       --> ..................................................
EV572532       --> GAGTTGTCAAGCTTGAGTTTTGTGACTTCCCCATCGTTGATACAATGATC
EV531272       --> ..................................................
EV545362       --> ..................................................
EV571424       --> ..................................................
EX769199       --> ..................................................
FD545603       --> ..................................................
FD985031       --> ..................................................
EX751699       --> ..................................................
EX776243       --> ..................................................
EY893926       --> ..................................................
EY902026       --> ..................................................
EV531352       --> GAGTTGTCAAGCTTGAGTTTTGTGACTTCCCCATCGTTGATACAATGATC
FD545212       --> ..................................................

               901    -    951
UN23300        --> CATAGCCCAGCTTGAGCGGTAAAGTTCCTCGAACTTAGCTCCTGGAGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898218       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD941317       <-- ..................................................  Raphanus sativus var. oleiformis
FD942025       <-- ..................................................  Raphanus sativus var. oleiformis
FY433386       <-- CATAGCCCAGCTAGAACGGTAAAGTTCCTCGAACTTAGCTCCAGGAGCAG  Raphanus sativus cv GSK3-1
EV537332       <-- CATAGCCCAGCTTGAGCGGTAAAGTTCCTCGAACTTAGCTCCTGGAGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV566250       <-- CATAGCCCAGCTTGAGCGGTAAAGTTCCTCGAACTTAGCTCCTGGAGCAG  Raphanus raphanistrum subsp. landra
EV526905       <-- CATAGCCCAGCTTGAGCGGTAAAGTTCCTCGAACTTAGCTCCTGGAGCAG  Raphanus raphanistrum subsp. maritimus
EX772246       <-- CATAGCCCAGCTTGAGCGGTAAAGTTCCTCGAACTTAGCTCCTGGAGCAG  Raphanus raphanistrum subsp. landra
EV567630       <-- CATAGCCCAGCTTGAGCGGTAAAGTTCCTCGAACTTAGCTCCTGGAGCAG  Raphanus raphanistrum subsp. landra
EV549994       <-- CATAGCCCAGCTCGAGCGGTAAAGTTCCTCGAACTTAGCTCCTGGAGCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937660       <-- CATAGCCCAGCTCGAGCGGTAAAGTTCCTCGAACTTAGCTCCTGGAGCAG  Raphanus sativus cv Early Scarlet Globe
EY950421       <-- CATAGCCCAGCTTGAGCGGTAAAGTTCCTCGAACTTAGCTCCTGGAGCAG  Raphanus sativus cv Rat-Tail Radish #3870
EX765411       <-- CATAGCCCAGCTCGAGCGGTAAAGTTCCTCGAACTTAGCTCCTGGAGCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989217       <-- CATAGCCCAGCTCGAGCGGTAAAGTTCCTCGAACTTAGCTCCTGGAGCAG  Raphanus raphanistrum subsp. landra
EY949581       <-- CATAGCCCAGCTTGAGCGGTAAAGTTCCTCGAACTTAGCTCCTGGAGCAG  Raphanus sativus cv Rat-Tail Radish #3870
EY933929       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV572532       --> CATAG.............................................  Raphanus raphanistrum subsp. landra
EV531272       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV545362       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571424       --> ..................................................  Raphanus raphanistrum subsp. landra
EX769199       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545603       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985031       --> ..................................................  Raphanus raphanistrum subsp. landra
EX751699       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX776243       --> ..................................................  Raphanus raphanistrum subsp. landra
EY893926       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY902026       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531352       --> CATAGCCCAGCTTGAGCGGTAAAGTTCCTCGAACTTAGCTCCTGGAGCAG  Raphanus raphanistrum subsp. maritimus
FD545212       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               951    -   1001
UN23300        --> CTTCGCCACAAGAAACCACACACACCACAATCATCAT---ACACATGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898218       <-- ..................................................
FD941317       <-- ..................................................
FD942025       <-- ..................................................
FY433386       <-- CTTCACCACAAGAAACCACACACACCACAATCATCATCATACACATGAAC
EV537332       <-- CTTCGCCACAAGAAACCACACACACCACAATCATCAT---ACACATGAAC
EV566250       <-- CTTCGCCACAAGAAACCACACACACCACAATCATCAT---ACACATGAAC
EV526905       <-- CTTGGCCACAAGAAACCACACACACCACAATCATCAT---A.........
EX772246       <-- CTTGGCCACAAGAAACCACACACACCACAATCATCAT---ACACATGAAC
EV567630       <-- CTTGGCCACAAGAAACCACACACACCACAATCATCAT---ACACATGAAC
EV549994       <-- CTTCCCCACAAGAAATCACACACACCGCAATCATCAT---ACACATGAAC
EY937660       <-- CTTCGCCACAAGAAACCACACACACCACAATCATCAT---ACACATGAAC
EY950421       <-- CTTCGCCACAAGAAACCACACACACCACAATCATCAT---ACACATGAAC
EX765411       <-- CTTCCCCACAAGAAATCACACACACCGCAATCATCAT---ACACATGAAC
FD989217       <-- CTTCCCCACAAGAAATCACACACACCGCAATCATCAT---ACACATGAAC
EY949581       <-- CTTCGCCACAAGAAACCACACACACCACAATCATCAT---ACACATGAAC
EY933929       --> ..................................................
EV572532       --> ..................................................
EV531272       --> ..................................................
EV545362       --> ..................................................
EV571424       --> ..................................................
EX769199       --> ..................................................
FD545603       --> ..................................................
FD985031       --> ..................................................
EX751699       --> ..................................................
EX776243       --> ..................................................
EY893926       --> ..................................................
EY902026       --> ..................................................
EV531352       --> CTTCGCCACA-GAAACCACACACACCACA-TCATCAT---ACACATG...
FD545212       --> ..................................................

               1001   -   1051
UN23300        --> CAAC------CCATTCCCACCATTTTTTT-AAATATTCACTCTACAGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY898218       <-- ..................................................
FD941317       <-- ..................................................
FD942025       <-- ..................................................
FY433386       <-- CAAC------CC......................................
EV537332       <-- CAAC------CCATTCCCACCATTTTTTT-AAATATTCACTCTACAGTCT
EV566250       <-- CAACAACAACCCATTCCCACCATTTTTTT-AAATATTCACTCTACAGTCT
EV526905       <-- ..................................................
EX772246       <-- CAAC------CCATTCCCACCATTTTTTT-AAATATTCACTCTACAGTCT
EV567630       <-- CAAC------CCATTCCCACCATTTTTTT-AAATATTCACTCTACAGTCT
EV549994       <-- CAAC------CCATTCCCACCATTTTTTT-AAATATTCACTCTACAGTCT
EY937660       <-- CAAC------CCATTCCCACCATTTTTTT-AAATATTCACTCGACAGTCT
EY950421       <-- CAAC------CCATTCCCACCATTTTTTT-AAATATTCACTCTACAGTCT
EX765411       <-- CAAC------CCATTCCCACCATTTTTTTTAAATATTCACTCTACAGTCT
FD989217       <-- CAAC------CCATTCCCACCATTTTTTT-AAATATTCACTCTACAGTCT
EY949581       <-- CAAC------CCATTCCCACCATTTTTTT-AAATATTCACTCTACAGTCT
EY933929       --> ..................................................
EV572532       --> ..................................................
EV531272       --> ..................................................
EV545362       --> ..................................................
EV571424       --> ..................................................
EX769199       --> ..................................................
FD545603       --> ..................................................
FD985031       --> ..................................................
EX751699       --> ..................................................
EX776243       --> ..................................................
EY893926       --> ..................................................
EY902026       --> ..................................................
EV531352       --> ..................................................
FD545212       --> ..................................................

               1051   -   1101
UN23300        --> CACACACTTTGACTCAATGCCC
                   ~~~~~~~~~~~~~~~~~~~~~~
EY898218       <-- ......................
FD941317       <-- ......................
FD942025       <-- ......................
FY433386       <-- ......................
EV537332       <-- CACACACTTTGACTCAATGtcc
EV566250       <-- CACACACTTTGACTCAATGtcc
EV526905       <-- ......................
EX772246       <-- CTCACACTTTGACTCAATcc..
EV567630       <-- CTCACACTTTGACTCAATGtcc
EV549994       <-- CACACACTTTtcc.........
EY937660       <-- CACACACTT-GACTCAATGCCC
EY950421       <-- CACACACTTTGACTCAATc...
EX765411       <-- CACACACTTTGACTCcc.....
FD989217       <-- CACACACTTTGACTCAATGtc.
EY949581       <-- CACcc.................
EY933929       --> ......................
EV572532       --> ......................
EV531272       --> ......................
EV545362       --> ......................
EV571424       --> ......................
EX769199       --> ......................
FD545603       --> ......................
FD985031       --> ......................
EX751699       --> ......................
EX776243       --> ......................
EY893926       --> ......................
EY902026       --> ......................
EV531352       --> ......................
FD545212       --> ......................