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Alignment for radish unigene UN23330

               -1     -     49
UN23330        --> ..GCCTTGGACACCACAAACATACATACACACCTC-AAAATCTCTC--AA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444423       <-- ..................................................  Raphanus sativus cv GSK3-1
EW719006       <-- ..................................................  Raphanus sativus var. oleiformis
EV543563       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573290       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD967065       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760348       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907681       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW738248       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD984099       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV573398       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD576103       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV529831       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY942429       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD943729       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD976543       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539481       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752694       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD538130       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD584384       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY943388       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD961072       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583533       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY906204       --> ggGCCTTGGACACCACAAACATACATACACACCTC-TAAATCTCTC--AA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547746       --> .........ggACCACAAACATACATACACACCTC-AAAATCTCTC--AA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW735262       --> .........ggACCACAAACATACATACACACCTC-AAAATCTCTC--AA  Raphanus sativus cv Rat-Tail Radish #3870
EX890047       --> .........ggACCACAAACATACATACACACCTC-AAAATCTCTC--AA  Raphanus sativus var. oleiformis
EX756564       --> ............ggACAAACATACATACACACCTC-TAAATCTCTC--AA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX903663       --> .....ggaccacaaACATACATACATACACACCTCTAAAATCTCTC--AA  Raphanus sativus cv Rat-Tail Radish #3870
FD988167       --> ...............gAAACATACATACACACCTC-AAAATCTCTCTCAA  Raphanus raphanistrum subsp. landra
FD550578       --> .................gggATACATACACCCCTC-AAAATCTCTC--AA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557779       --> ..................ggATACATACACACCTC-AAAATCTCTCTCAA  Raphanus raphanistrum subsp. landra
EV524970       --> ....................ggACATACACACCTC-AAAATCTCTCTCAA  Raphanus raphanistrum subsp. maritimus
FD550524       --> ......................ggATACACACCTC-TAAATCTCTC--AA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970786       --> ........................ggACACACCTC-TAAATCTCTC--AA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970492       --> ...................................ggAAATCTCTC--AA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568606       --> ..............................................ggAA  Raphanus raphanistrum subsp. landra
EV568744       --> .............................................ggaAA  Raphanus raphanistrum subsp. landra
FY435963       --> ................................................cA  Raphanus sativus cv GSK3-1
FY435992       --> ................................................cA  Raphanus sativus cv GSK3-1
FD980686       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714248       --> ..................................................  Raphanus sativus var. oleiformis
FD543703       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446257       --> ..................................................  Raphanus sativus cv GSK3-1
EY946309       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD947857       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD937826       --> ..................................................  Raphanus sativus var. oleiformis
EY947502       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD579571       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD965292       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               49     -     99
UN23330        --> ATCAGA-GCAGAAGAAGCGAC-AAGAAAACCC------C-TTCTTTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444423       <-- ..................................................  Raphanus sativus cv GSK3-1
EW719006       <-- ..................................................  Raphanus sativus var. oleiformis
EV543563       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573290       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD967065       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760348       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907681       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW738248       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD984099       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV573398       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD576103       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV529831       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY942429       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD943729       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD976543       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539481       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752694       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD538130       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD584384       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY943388       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD961072       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583533       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY906204       --> ATCAGA-GCAGAAGAAGCGAC-AAGAAAACCC------C-TTCTTTCT--  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547746       --> ATCAGA-GCAGAAGAAGCGACCAAGAAAACCC------C-TTCTTTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW735262       --> ATCAGA-GCAGAAGAAGCGACCAAGAAAACCC------C-TTCTTTCTTT  Raphanus sativus cv Rat-Tail Radish #3870
EX890047       --> ATCAGAAGAAGAGGAAGCGAC-AAGAAAACCC------C-TTCTTTCTTT  Raphanus sativus var. oleiformis
EX756564       --> ATCAGA-GCAGAAGAAGCGAC-AAGAAAACCC------C-TTCTTTCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX903663       --> ATCAGAAGAAGAAGAAGCGACCAAGAAAACCC------------TTCTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD988167       --> ATCAGA-GCAGAAGAAGCGAC-AAGAAAACCC----TTCTTTCTTTCTTT  Raphanus raphanistrum subsp. landra
FD550578       --> ATCAGA---AGAAGAAGCGACCAAGAAAACCC------C-T-CT--CT--  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557779       --> ATCAGA-GCAGAAGAAGCGAC-AAGAAAACCC----TTCTTTCTTTCTTT  Raphanus raphanistrum subsp. landra
EV524970       --> ATCAGA-GCAGAAGAAGCGAC-AAGAAAACCC----TTCTTTCTTTCTTT  Raphanus raphanistrum subsp. maritimus
FD550524       --> ATCAGA-GCAGAAGAAGCGAC-AAGAAAACTC------C-TTCTTTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970786       --> ATCAGA-GCAGAAGAAGCGAC-AAGAAAACCC------C-TTCTTTCT--  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970492       --> ATCAGA-GCAGAAGAAGCGAC-AAGAAAACCC------C-TTCTTTCT--  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568606       --> ATCAGA-GCAGAAGAAGCGAC-AAGAAAACCC----TTCTTTCTTTCTTT  Raphanus raphanistrum subsp. landra
EV568744       --> ATCAGA-GCAGAAGAAGCGAC-AAGAAAACCCTTCTTTCTTTCTTTCTTT  Raphanus raphanistrum subsp. landra
FY435963       --> ATCAGAAGAAGAAGAAGCGACCAAGAAAACCC------------TTCTTT  Raphanus sativus cv GSK3-1
FY435992       --> ATCAGAAGAAGAAGAAGCGACCAAGAAAACCC------------TTCTTT  Raphanus sativus cv GSK3-1
FD980686       --> .ggAGA-GCAGAAGAAGCGACCAAGAAAACCC------C-TTCTTTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714248       --> .........AGAGGAAGCGAC-AAGAAAACCC------C-TTCTTTCTTT  Raphanus sativus var. oleiformis
FD543703       --> ...........AAGAAGCGAC-AAGAAAACCC------C-TTCTTTCT--  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446257       --> .......................aagaagcgaccaagaaaacccTTCTTT  Raphanus sativus cv GSK3-1
EY946309       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD947857       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD937826       --> ..................................................  Raphanus sativus var. oleiformis
EY947502       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD579571       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD965292       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               99     -    149
UN23330        --> CT----CTTCCGCCATTGAAATGGCTCTTA---AAGCTTCACCAGTCGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444423       <-- ..................................................
EW719006       <-- ..................................................
EV543563       <-- ..................................................
EV573290       <-- ..................................................
FD967065       <-- ..................................................
EX760348       <-- ..................................................
EX907681       <-- ..................................................
EW738248       <-- ..................................................
FD984099       <-- ..................................................
EV573398       <-- ..................................................
FD576103       <-- ..................................................
EV529831       <-- ..................................................
EY942429       <-- ..................................................
FD943729       <-- ..................................................
FD976543       <-- ..................................................
FD539481       <-- ..................................................
EX752694       <-- ..................................................
FD538130       <-- ..................................................
FD584384       <-- ..................................................
EY943388       <-- ..................................................
FD961072       <-- ..................................................
FD583533       <-- ..................................................
EY906204       --> ------CTTCCGCCATTGAAATGGCTCTTATTAAAGCTTCACCAGTCGCC
EV547746       --> CT----CTTCAGCCATTGAAATGGCTCTTA---AAGCTTCACCAGTCGCC
EW735262       --> CT----CTTCAGCCATTGAAATGGCTCTTA---AAGCTTCACCAGTCGCC
EX890047       --> CTTTCTCTTCCGCCATTGAAATGGCTCTTA---AAGCTCCACCAGTCGCC
EX756564       --> CT----CTTCCGCCATTGAAATGGCTCTTA---AAGCTTCACCAGTCGCC
EX903663       --> CT----CTTCCGCCATTGAAATGGCTCTTA---AAGCTTCACCAGTCGCC
FD988167       --> CT----CTTCCGCCATTGAAATGGCTCTTA---AAGCTTCACCAGTCGCC
FD550578       --> CT----CTTCCGCCATTAAAATGGCTCTTA---AAGCTTCACCAGTCGCC
FD557779       --> CT----CTTCCGCCATTGAAATGGCTCTTA---AAGCTTCACCAGTCGCC
EV524970       --> CT----CTTCCGCCATTGAAATGGCTCTTA---AAGCTTCACCAGTCGCC
FD550524       --> CT----CTTCCGCCATTGAAATGGCTCTTA---AAGCTTCACCAGTCGCC
FD970786       --> ------CTTCCGCCATTGAAATGGCTCTTATTAAAGCTTCACCAGTCGCC
FD970492       --> ------CTTCCGCCATTGAAATGGCTCTTATTAAAGCTTCACCAGTCGCC
EV568606       --> CT----CTTCCGCCATTGAAATGGCTCTTA---AAGCTTCACCAGTCGCC
EV568744       --> CT----CTTCCGCCATTGAAATGGCTCTTA---AAGCTTCACCAGTCGCC
FY435963       --> CT----CTTCCGCCATTGAAATGGCTCTTA---AAGCTTCACCAGTCGCC
FY435992       --> CT----CTTCCGCCATTGAAATGGCTCTTA---AAGCTTCACCAGTCGCC
FD980686       --> CT----CTTCAGCCATTGAAATGGCTCTTA---AAGCTTCACCAGTCGCC
EW714248       --> CTTTCTCTTCCGCCATTGAAATGGCTCTTA---AAGCTTCACCAGTCGCC
FD543703       --> ------CTTCCGCCATTGAAATGGCTCTTATTAAAGCTTCACCAGTCGCC
FY446257       --> CT----CTTCCGCCATTGAAATGGCTCTTA---AAGCTTCACCAGTCGCC
EY946309       --> ..................................................
FD947857       --> ..................................................
FD937826       --> ..................................................
EY947502       --> ..................................................
FD579571       --> ..................................................
FD965292       --> ..................................................

               149    -    199
UN23330        --> GGATTATTCCCTCCTCTCCGCCCCACTGCTTCCACTTCTAATCGCCCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444423       <-- ..................................................  Raphanus sativus cv GSK3-1
EW719006       <-- ..................................................  Raphanus sativus var. oleiformis
EV543563       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573290       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD967065       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760348       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907681       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW738248       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD984099       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV573398       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD576103       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV529831       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY942429       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD943729       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD976543       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539481       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752694       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD538130       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD584384       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY943388       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD961072       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583533       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY906204       --> GGATTATTCCCTCCTCTCCGCCCCACTGCTTCCACTTCTAATCGCCCTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547746       --> GGATTATTCCCTCCTCTCCGCCCCACTGCTTCCACTTCTAATCGCCCTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW735262       --> GGATTATTCCCTCCTCTCCGCCCCACTGCTTCCACTTCTAATCGCCCTTG  Raphanus sativus cv Rat-Tail Radish #3870
EX890047       --> GGATTATTCCCTCCTCTCCGCCCCACTGCTTCCACTTCTAATCGCCCCTG  Raphanus sativus var. oleiformis
EX756564       --> GGACTATTCCCTCCTCTCCGCCCCACTGCTTCCACTTCCAATCGCCCTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX903663       --> GGACTATTCCCTCCTCTCCGCCTCACTGCTTCCACTTCTAATCGCCCTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD988167       --> GGATTATTCCCTCCTCTCCGCCCCACTGCTTCCACTTCTAATCGCCCTTG  Raphanus raphanistrum subsp. landra
FD550578       --> GGATTATTCCCTCCTCTCCGCCCCACTGCTTCCACTTCTAATCGCCCTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557779       --> GGATTATTCCCTCCTCTCCGCCCCACTGCTTCCACTTCTAATCGCCCTTG  Raphanus raphanistrum subsp. landra
EV524970       --> GGATTATTCCCTCCTCTCCGCCCCACTGCTTCCACTTCTAATCGCCCTTG  Raphanus raphanistrum subsp. maritimus
FD550524       --> GGATTATTCCCTCCTCTCCGCCCCACTGCTTCCACTTCTAATCGCCCTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970786       --> GGATTATTCCCTCCTCTCCGCCCCACTGCTTCCACTTCTAATCGCCCTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970492       --> GGATTATTCCCTCCTTTCCGCCCCACTGCTTCCACTTCTAATCGCCCTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568606       --> GGATTATTCCCTCCTCTCCGCCCCACTGCTTCCACTTCTAATCGCCCTTG  Raphanus raphanistrum subsp. landra
EV568744       --> GGATTATTCCCTCCTCTCCGCCCAACTGCTTCCACTTCTAATCGCCCCTG  Raphanus raphanistrum subsp. landra
FY435963       --> GGACTATTCCCTCCTCTCCGCCCCACTGCTTCCACTTCTAATCGCCCTTG  Raphanus sativus cv GSK3-1
FY435992       --> GGACTATTCCCTCCTCTCCGCCCCACTGCTTCCACTTCTAATCGCCCTTG  Raphanus sativus cv GSK3-1
FD980686       --> GGATTATTCCCTCCTCTCCGCCCCACTGCTTCCACTTCTAATCGCCCTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714248       --> GGATTATTCCCTCCTCTCCGCCCCACTGCTTCCACTTCTAATCGCCCCTG  Raphanus sativus var. oleiformis
FD543703       --> GGATTATTCCCTCCTCTCCGCCCCACTGCTTCCACTTCTAATCGCCCTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446257       --> GGACTATTCCCTCCTCTCCGCCCCACTGCTTCCACTTCTAATCGCCCTTG  Raphanus sativus cv GSK3-1
EY946309       --> .............CTCTCCGCCCCACTGCTTCCACTTCTAATCGCCCTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD947857       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD937826       --> ..................................................  Raphanus sativus var. oleiformis
EY947502       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD579571       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD965292       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               199    -    249
UN23330        --> TAGTACCCTCAGGCTCAGGCCACTTCCCCTCCGAACATCCTTCTTCGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444423       <-- ..................................................  Raphanus sativus cv GSK3-1
EW719006       <-- ..................................................  Raphanus sativus var. oleiformis
EV543563       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573290       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD967065       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760348       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907681       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW738248       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD984099       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV573398       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD576103       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV529831       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY942429       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD943729       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD976543       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539481       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752694       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD538130       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD584384       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY943388       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD961072       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583533       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY906204       --> TAGTACCCTCAGGCTCAGGCCACTTCCCCTCCGAACATCCTTCTTCGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547746       --> TAGTACCCTCAGGCTCAGGCCACTTCCCCTCCGAACATCCTTCTTCGGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW735262       --> TAGTACCCTCAGGCTCAGGCCACTTCCCCTCCGAACATCCTTCTTCGGAA  Raphanus sativus cv Rat-Tail Radish #3870
EX890047       --> TAGTACCCTCAGGCTCAGGCCACTTCCCCTCCGAACATCCTTCTTCGGAA  Raphanus sativus var. oleiformis
EX756564       --> TAGTACCCTCAGGCTCAGGCCACTTCCCCTCCGAACATCCTTCTTCGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX903663       --> TAGTACCCTCAGGCTCAGGCCACTCCCCCTCCGAACATCCTTCTTCGGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD988167       --> TAGTACCCTCAGGCTCAGGCCACTTCCCCTCCGAACATCCTTCTTCGGAA  Raphanus raphanistrum subsp. landra
FD550578       --> TAGTACCCTCAGGCTCAGGCCACTTCCCCTCCGAACATCCTTCTTCGGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557779       --> TAGTACCCTCAGGCTCAGGCCACTTCCCCTCCGAACATCCTTCTTCGGAA  Raphanus raphanistrum subsp. landra
EV524970       --> TAGTACCCTCAGGCTCAGGCCACTTCCCCTCCGAACATCCTTCTTCGGAA  Raphanus raphanistrum subsp. maritimus
FD550524       --> TACTACCCTCAGGCTCAGGCCACTTCCTCTCCGAACATCCTTCTTCGGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970786       --> TAGTACCCTCAGGCTCAGGCCTCTTCCCCTCCGAACATCCTTCTTCGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970492       --> TAGTACCCTCAGGCTCAGTCCACTTCCCCTCCGAACATCCTTCTTCGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568606       --> TAGTACCCTCAGGCTCAGGCCACTTCCCCTCCGAACATCCTTCTTCGGAA  Raphanus raphanistrum subsp. landra
EV568744       --> TAGTACCCTCAGGCTCAGGCCACTTCCCCTCCGAACATCCTTCTTCGGAA  Raphanus raphanistrum subsp. landra
FY435963       --> TAGTACCCTCAGGCTCAGGCCACTCCCCCTCCGAACATCCTTCTTCGGAA  Raphanus sativus cv GSK3-1
FY435992       --> TAGTACCCTCAGGCTCAGGCCACTCCCCCTCCGAACATCCTTCTTCGGAA  Raphanus sativus cv GSK3-1
FD980686       --> TAGTACCCTCAGGCTCAGGCCACTTCCCCTCCGAACATCCTTCTTCGGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714248       --> TAGTACCCTCAGGCTCAGGCCACTTCCCCTCCGAACATCCTTCTTCGGAA  Raphanus sativus var. oleiformis
FD543703       --> TAGTACCCTCAGGCTCAGGCCACTTCCCCTCCGAACATCCTTCTTCGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446257       --> TAGTACCCTCAGGCTCAGGCCACTCCCCCTCCGAACATCCTTCTTCGGAA  Raphanus sativus cv GSK3-1
EY946309       --> TAGTACCCTCAGGCTCAGGCCACTCCCCCTCCGAACATCCTTCTTCGGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD947857       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD937826       --> ..................................................  Raphanus sativus var. oleiformis
EY947502       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD579571       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD965292       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               249    -    299
UN23330        --> ACTCCGGTGGAGCTTTGAGAGTGAACGAGCTGAGACTAGCTTGTGCAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444423       <-- ..................................................
EW719006       <-- ..................................................
EV543563       <-- ..................................................
EV573290       <-- ..................................................
FD967065       <-- ..................................................
EX760348       <-- ..................................................
EX907681       <-- ..................................................
EW738248       <-- ..................................................
FD984099       <-- ..................................................
EV573398       <-- ..................................................
FD576103       <-- ..................................................
EV529831       <-- ..................................................
EY942429       <-- ..................................................
FD943729       <-- ..................................................
FD976543       <-- ..................................................
FD539481       <-- ..................................................
EX752694       <-- ..................................................
FD538130       <-- ..................................................
FD584384       <-- ..................................................
EY943388       <-- ..................................................
FD961072       <-- ..................................................
FD583533       <-- ..................................................
EY906204       --> ACTCCGGTAGAGCTTTGAGAGTGAACGAGCTGAGAGTAGCTTGTGCAAAT
EV547746       --> ACTCCGGTGGAGCTTTGAGAGTGAACGAGCTGAGACTAGCCTGTGCAAAT
EW735262       --> ACTCCGGTGGAGCTTTGAGAGTGAACGAGCTGAGACTAGCTTGTGCAAAT
EX890047       --> ACTCCGGTGGAGCTTTGAGAGTGAACGAGCTGAGACTAGCTTGTGCAAAT
EX756564       --> ACTCCGGCGGAGCTTTGAGAGTGAACGAGCTGAGACTAGCTTGTGCAAAT
EX903663       --> ACTCCGGTGGAGCTTTGAGAGTGAACGAGCTGAGACTAGCTTGTGCAAAT
FD988167       --> ACTCCGGTGGAGCTTTGAGAGTGAACGAGCTGAGACTAGCTTGTGCAAAT
FD550578       --> AATCCGGTGGAGCTTTGAGAGTGAACGAGCTGAGACTAGCTTGTGCAAAT
FD557779       --> ACTCCGGTGGAGCTTTGAGAGTGAACGAGCTGAGACTAGCTTGTGCAAAT
EV524970       --> ACTCCGGTGGAGCTTTGAGAGTGAACGAGCTGAGACTAGCTTGTGCAAAT
FD550524       --> ACTCCGGTG-AGCTTTGAGAGTGAACGAGTTGAGATTAGCTTGTGCAAAT
FD970786       --> ACTCCGGTAGAGCTTTGAGAGTGAACGAGCTGAGAGTAGCTTGTGCAAAT
FD970492       --> ACTCCGGTAGAGCTTTGAGAGTGAACGAGCTGAGAGTAGCTTGTGCAAAT
EV568606       --> ACTCCGGTGGAGCTTTGAGAGTGAACGAGCTGAGACTAGCTTGTGCAAAT
EV568744       --> ACTCCGGTGGAGCTTTGAGAGTGAACGAGCTGAGACTAGCTTGTGCAAAT
FY435963       --> ACTCCGGTGGAGCTTTGAGAGTGAACGAGCTGAGACTAGCTTGTGCAAAT
FY435992       --> ACTCCGGTGGAGCTTTGAGAGTGAACGAGCTGAGACTAGCTTGTGCAAAT
FD980686       --> ACTCCGGTGGAGCTTTGAGAGTGAACGAGCTGAGACTAGCTCGTGCAAAT
EW714248       --> ACTCCGGTGGAGCTTTGAGAGTGAACGAGCTGAGACTAGCTTGTGCAAAT
FD543703       --> ACTCCGGTAGAGCTTTGAGAGTGAACGAGCTGAGAGTAGCTTGTGCAAAT
FY446257       --> ACTCCGGTGGAGCTTTGAGAGTGAACGAGCTGAGACTAGCTTGTGCAAAT
EY946309       --> ACTCCGGTGGAGCTTTGAGAGTGAACGAGCTGAGACTAGCTTGTGCAAAT
FD947857       --> ..................................................
FD937826       --> ..................................................
EY947502       --> ..................................................
FD579571       --> ..................................................
FD965292       --> ..................................................

               299    -    349
UN23330        --> AGGTTGAAGTGCAATGCTCATGGTCCTACCATGAATCTTTTTGAAAGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444423       <-- ..................................................  Raphanus sativus cv GSK3-1
EW719006       <-- ..................................................  Raphanus sativus var. oleiformis
EV543563       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573290       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD967065       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760348       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907681       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW738248       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD984099       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV573398       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD576103       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV529831       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY942429       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD943729       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD976543       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539481       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752694       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD538130       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD584384       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY943388       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD961072       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583533       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY906204       --> AGGTTGAAGTGCAATGCTCATGGTCCTACCATGAATCTTTTTGAAAGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547746       --> AGGTTGAAGTGCAATGCTCATGGTCCTACCATGAATCTTTTTGAAAGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW735262       --> AGGTTGAAGTGCAATGCTCATGGTCCTACCATGAATCTTTTTGAAAGATT  Raphanus sativus cv Rat-Tail Radish #3870
EX890047       --> AGGTTGAAGTGCAATGCTCATGGTCCTACCATGAATCTTTTTGAAAGATT  Raphanus sativus var. oleiformis
EX756564       --> AGGTTGAAGTGCAATGCTCATGGTCCTACCATGAATCTTTTTGAAAGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX903663       --> AGGTTGAAGTGCAATGCTCATGGTCCTACCATGAATCTTTTCGAAAGATT  Raphanus sativus cv Rat-Tail Radish #3870
FD988167       --> AGGTTGAAGTGCAATGCTCATGGTCCTACCATGAATCTTTTCGAAAGATT  Raphanus raphanistrum subsp. landra
FD550578       --> AGGTTGAAGTGCAATGCTCATGGTCCTACCATGAATCTTTTTGAAAGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557779       --> AGGTTGAAGTGCAATGCTCATGGTCCTACCATGAATCTTTTCGAAAGATT  Raphanus raphanistrum subsp. landra
EV524970       --> AGGTTGAAGTGCAATGCTCATGGTCCTACCATGAATCTTTTCGAAAGATT  Raphanus raphanistrum subsp. maritimus
FD550524       --> AGGTTGAAGTGCAATGCTCATGGTCCTACCATGAATCTTTTCGAAAGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970786       --> AGGTTGAAGTGCAATGCTCATGGTCCTACCATGAATCTTTTTGAAAGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970492       --> AGGTTGAAGTGCAATGCTCATGGTCCTACCATGAATCTTTTTGAAAGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568606       --> AGGTTGAAGTGCAATGCTCATGGTCCTACCATGAATCTTTTCGAAAGATT  Raphanus raphanistrum subsp. landra
EV568744       --> AGGTTGAAGTGCAATGCTCATGGTCCTACCATGAATCTTTTCGAAAGATT  Raphanus raphanistrum subsp. landra
FY435963       --> AGGTTGAAGTGCAATGCTCATGGTCCTACCATGAATCTTTTCGAAAGATT  Raphanus sativus cv GSK3-1
FY435992       --> AGGTTGAAGTGCAATGCTCATGGTCCTACCATGAATCTTTTCGAAAGATT  Raphanus sativus cv GSK3-1
FD980686       --> AGGTTGAAGTGCAATGCTCATGGTCCTACCATGAATCTTTTTGAAAGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714248       --> AGGTTGAAGTGCAATGCTCATGGTCCTACCATGAATCTTTTTGAAAGATT  Raphanus sativus var. oleiformis
FD543703       --> AGGTTGAAGTGCAATGCTCATGGTCCTACCATGAATCTTTTTGAAAGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446257       --> AGGTTGAAGTGCAATGCTCATGGTCCTACCATGAATCTTTTCGAAAGATT  Raphanus sativus cv GSK3-1
EY946309       --> AGGTTGAAGTGCAATGCTCATGGTCCTACCATGAATCTTTTCGAAAGATT  Raphanus sativus cv Rat-Tail Radish #3870
FD947857       --> ..................CATGGTCCTACCATGAATCTTTTTGAAAGATT  Raphanus sativus cv Early Scarlet Globe
FD937826       --> ..................................................  Raphanus sativus var. oleiformis
EY947502       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD579571       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD965292       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               349    -    399
UN23330        --> TTCTAGGGTTGTCAAGTCATATGCCAATGCACTTATAAGCTCCTTCGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444423       <-- ...................TATGCCAATGCACTTATAAGCTCCTTCGAAG  Raphanus sativus cv GSK3-1
EW719006       <-- ............................GCACTTATAAGCTC-TTTGAAG  Raphanus sativus var. oleiformis
EV543563       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573290       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD967065       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760348       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907681       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW738248       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD984099       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV573398       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD576103       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV529831       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY942429       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD943729       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD976543       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539481       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752694       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD538130       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD584384       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY943388       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD961072       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583533       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY906204       --> TTCTAGGGTTGTCAAGTCATATGCCAATGCACTTATAAGCTCCTTCGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547746       --> TTCTAGGGTTGTCAAGTCATATGCCAATGCACTTATAAGCTCCTTCGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW735262       --> TTCTAGGGTTGTCAAGTCATATGCCAATGCACTTATAAGCTCCTTCGAAG  Raphanus sativus cv Rat-Tail Radish #3870
EX890047       --> TTCTAGGGTTGTCAAGTCATATGCCAATGCACTTATAAGCTCCTTTGAAG  Raphanus sativus var. oleiformis
EX756564       --> TTCTAGGGTTGTCAAGTCATATGCCAATGCACTTATAAGCTCCTTTGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX903663       --> TTCTAGGGTTGTCAAGTCATATGCCAATGCACTTATAAGCTCCTTCGAAG  Raphanus sativus cv Rat-Tail Radish #3870
FD988167       --> TTCTAGGGTTGTCAAGTCATGTGCCAATGCACTTATAAGCTCCTTCGAAG  Raphanus raphanistrum subsp. landra
FD550578       --> TTCTAGGGTTGTCAAGTCATATGCCAATGCACTTATAAGCTCCTTCGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557779       --> TTCTAGGGTTGTCAAGTCATATGCCAATGCACTTATAAGCTCCTTCGAAG  Raphanus raphanistrum subsp. landra
EV524970       --> TTCTAGGGTTGTCAAGTCATATGCCAATGCACTTATAAGCTCCTTCGAAG  Raphanus raphanistrum subsp. maritimus
FD550524       --> TTCTAGGGTTGTCAAGTCATATGCCAATGCACTTATAAGCTCCTTCGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970786       --> TTCTAGGGTTGTCAAGTCATATGCCAATGCACTTATAAGCTCCTTCGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970492       --> TTCTAGGGTTGTCAAGTCATATGCCAATGCACTTATAAGCTCCTTCGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568606       --> TTCTAGGGTTGTCAAGTCATATGCCAATGCACTTATAAGCTCCTTCGAAG  Raphanus raphanistrum subsp. landra
EV568744       --> TTCTAGGGTTGTCAAGTCATATGCCAATGCACTTATAAGCTCCTTCGAAG  Raphanus raphanistrum subsp. landra
FY435963       --> TTCTAGGGTTGTCAAGTCATATGCCAATGCACTTATAAGCTCCTTCGAAG  Raphanus sativus cv GSK3-1
FY435992       --> TTCTAGGGTTGTCAAGTCATATGCCAATGCACTTATAAGCTCCTTCGAAG  Raphanus sativus cv GSK3-1
FD980686       --> TTCTAGGGTTGTCAAGTCATATGCCAATGCACTTATAAGCTCCTTCGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714248       --> TTCTAGGGTTGTCAAGTCATATGCCAATGCACTTATAAGCTCCTTTGAAG  Raphanus sativus var. oleiformis
FD543703       --> TTCTAGGGTTGTCAAGTCATATGCCAATGCACTTATAAGCTCCTTCGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446257       --> TTCTAGGGTTGTCAAGTCATATGCCAATGCACTTATAAGCTCCTTCGAAG  Raphanus sativus cv GSK3-1
EY946309       --> TTCTAGGGTTGTCAAGTCATATGCCAATGCACTTATAAGCTCCTTCGAAG  Raphanus sativus cv Rat-Tail Radish #3870
FD947857       --> TTCTAGGGTTGTCAAGTCATATGCCAATGCACTTATAAGCTCCTTCGAAG  Raphanus sativus cv Early Scarlet Globe
FD937826       --> ......................................GCTCCTTTGAAG  Raphanus sativus var. oleiformis
EY947502       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD579571       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD965292       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               399    -    449
UN23330        --> ACCCTGAGAAGATCCTCGAGCAAACTGTTATTGAAATGAATTCTGATTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444423       <-- ACCCTGAGAAGATCCTCGAGCAAACTGTTATTGAAATGAATTCTGATTTG
EW719006       <-- ACC-TGAGAAGATCCTCGAGCAAACTGTTATTGAAATGAATTCTGATTTG
EV543563       <-- .......GAAGATCCTCGAGCAAACTGTTATTGAAATGAATTCTGATTTG
EV573290       <-- .........AGATCCTCGAGCAAACTGTTATTGAAATGAATTCTGATTTG
FD967065       <-- ...............TCGAGCAAACTGTTATTGAAATGAATTCTGATTTG
EX760348       <-- ................CGAGCAAACTGT-A-TGAAATGAATTCTGATTTG
EX907681       <-- ...............................TGAAATGAAT-CTGATT-G
EW738248       <-- ............................................GATTTG
FD984099       <-- ............................................GATTTG
EV573398       <-- .............................................ATTTG
FD576103       <-- ...............................................TTG
EV529831       <-- ..................................................
EY942429       <-- ..................................................
FD943729       <-- ..................................................
FD976543       <-- ..................................................
FD539481       <-- ..................................................
EX752694       <-- ..................................................
FD538130       <-- ..................................................
FD584384       <-- ..................................................
EY943388       <-- ..................................................
FD961072       <-- ..................................................
FD583533       <-- ..................................................
EY906204       --> ACCCTGAGAAGATCCTCGAGCAAACTGTTATTGAAATGAATTCTGATTTG
EV547746       --> ACCCTGAGAAGATCCTCGAGCAAACTGTTATTGAAATGAATTCTGATTTG
EW735262       --> ACCCTGAGAAGATCCTCGAGCAAACTGTTATTGAAATGAATTCTGATTTG
EX890047       --> ACCCTGAGAAGATCCTCGAGCAAACTGTTATTGAAATGAATTCTGATTTG
EX756564       --> ACCCTGAGAAGATCCTCGAGCAAACTGTTATTGAAATGAATTCTGATTTG
EX903663       --> ACCCTGAGAAGATCCTCGAGCAAACTGTTATTGAAATGAATTCTGATTTG
FD988167       --> ACCCTGAGAAGATCCTCGAGCAAACTGTTATTGAAATGAATTCTGATTTG
FD550578       --> ACCCTGAGAAGATCCTTGAGCAAACTGTTATTGAAATGAATTCTGATTTG
FD557779       --> ACCCTGAGAAGATCCTCGAGCAAACTGTTATTGAAATGAGTTCTGATTTG
EV524970       --> ACCCTGAGAAGATCCTCGAGCAAACTGTTATTGAAATGAATTCTGATTTG
FD550524       --> ACCCTGAGAAGATCCTCGAGCAAACTGTTATTGAAATGAATTCTGATTTG
FD970786       --> ACCCTGAGAAGATCCTCGAGCAAACTGTTATTGAAATGAATTCTGATTTG
FD970492       --> ACCCTGAGAAGATCCTCGAGCAAACTGTTATTGAAATGAATTCTGATTTG
EV568606       --> ACCCTGAGAAGATCCTCGAGCAAACTGTTATTGAAATGAATTCTGATTTG
EV568744       --> ACCCTGAGAAGATCCTCGAGCAAACTGTTATTGAAATGAATTCTGATTTG
FY435963       --> ACCCTGAGAAGATCCTCGAGCAAACTGTTATTGAAATGAATTCTGATTTG
FY435992       --> ACCCTGAGAAGATCCTCGAGCAAACTGTTATTGAAATGAATTCTGATTTG
FD980686       --> ACCCTGAGAAGATCCTCGAGCAAACTGTTATTGAAATGAATTCTGATTTG
EW714248       --> ACCCTGAGAAGATCCTCGAGCAAACTGTTATTGAAATGAATTCTGATTTG
FD543703       --> GCCCTGAGAAGATCCTCGAGCAAGCTGTTATTGAAATGAATTCTGATTTG
FY446257       --> ACCCTGAGAAGATCCTCGAGCAAACTGTTATTGAAATGAATTCTGATTTG
EY946309       --> ACCCTGAGAAGATCCTCGAGCAAACTGTTATTGAAATGAATTCTGATTTG
FD947857       --> ACCCTGAGAAGATCCTCGAGCAAACTGTTATTGAAATGAATTCTGATTTG
FD937826       --> ACCCTGAGAAGATCCTCGAGCAAACTGTTATTGAAATGAATTCTGATTTG
EY947502       --> ..................................................
FD579571       --> ..................................................
FD965292       --> ..................................................

               449    -    499
UN23330        --> ACCAAGATGCGTCAAGCCACTGCACAGGTTTTAGCTTCACAAAAGCAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444423       <-- ACCAAGATGCGTCAAGCCACTGCACAGGTCTTGGCTTCACAAAAGCAGCT  Raphanus sativus cv GSK3-1
EW719006       <-- ACCAAGATGCGTCAAGCCACTGCACAGGTTTTAGCTTCACAAAAGCAGCT  Raphanus sativus var. oleiformis
EV543563       <-- ACCAAGATGCGTCAAGCCACTGCACAGGTTTTAGCTTCACAAAAGCAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573290       <-- ACCAAGATGCGTCAAGCCACTGCACAGGTTTTAGCTTCACAAAAGCAGTT  Raphanus raphanistrum subsp. landra
FD967065       <-- ACCAAGATGCGTCAAGCCACTGCACAGGTTTTAGCTTCACAAAAGCAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760348       <-- ACCAAGATGCGTCAAGCCACCGCACAGGTTT-AGCATCACAGAAGCAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907681       <-- ACCAAGATGCGTCAAGCCACTGCACAGGTCTTGGCTTCACAAAAGCAGCT  Raphanus sativus cv Rat-Tail Radish #3870
EW738248       <-- ACCAAGATGCGTCAAGCCACTGCACAGGTTTTAGCTTCACAAAAGCAGCT  Raphanus sativus cv Rat-Tail Radish #3870
FD984099       <-- ACCAAGATGCGTCAAGCCACTGCACAGGTTTTAGCTTCACAAAAGCAGCT  Raphanus raphanistrum subsp. landra
EV573398       <-- ACCAAGATGCGTCAAGCCACTGCACAGGTTTTAGCTTCACAAAAGTAGCT  Raphanus raphanistrum subsp. landra
FD576103       <-- ACCAAGATGCGTCAAGCCACTGCACAGGTTT-AGCTTCACAAAAGCAGCT  Raphanus sativus cv Early Scarlet Globe
EV529831       <-- ........................CAGGTTTTAGCTTCACAAAAGCAGCT  Raphanus raphanistrum subsp. maritimus
EY942429       <-- ...................................TTCACAAAAGCAGCT  Raphanus sativus cv Rat-Tail Radish #3870
FD943729       <-- .............................................CAGCT  Raphanus sativus cv Early Scarlet Globe
FD976543       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539481       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752694       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD538130       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD584384       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY943388       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD961072       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583533       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY906204       --> ACCAAGATGCGTCAAGCCACTGCACAGGTTTTAGCTTCACAAAAGCAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547746       --> ACCAAGATGCGTCAAGCCACTGCACAGGTTTTAGCTTCACAAAAGCAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW735262       --> ACCAAGATGCGTCAAGCCACTGCACAGGTTTTAGCTTCACAAAAGCAGCT  Raphanus sativus cv Rat-Tail Radish #3870
EX890047       --> ACCAAGATGCGTCAAGCCACTGCACAGGTTTTAGCTTCACAAAAGCAGCT  Raphanus sativus var. oleiformis
EX756564       --> ACCAAGATGCGTCAAGCCACCGCACAGGTTTTAGCATCACAGAAGCAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX903663       --> ACCAAGATGCGTCAAGCCACTGCACAGGTCTTGGCTTCACAAAAGCAGCT  Raphanus sativus cv Rat-Tail Radish #3870
FD988167       --> ACCAAGATGCGTCAAGCCACTGCACAGGTTTTAGCTTCACAAAAGCAGCT  Raphanus raphanistrum subsp. landra
FD550578       --> ACCAAGATGCGTCAAGCCACTGCACAGGTTTTAGCTTCACAAAAGCAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557779       --> ACCAAGATGCGTCAAGCCACTGCACATGTTTTAGCTTCGCAAAAGCAGCT  Raphanus raphanistrum subsp. landra
EV524970       --> ACCAAGATGCGTCAAGCCACTACACAGGTTTTAGCTTCACAAAAGCAGCT  Raphanus raphanistrum subsp. maritimus
FD550524       --> ACTAAGATGCGTCAAGCCACTGCACAGGTTTTAGCTTCACAAAAGCAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970786       --> ACCAAGATGCGTCAAGCCACTGCACAGGTTTTAGCTTCACAAAAGCAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970492       --> ACCAAGATGCGTCAAGCCACTGCACAGGTTTTAGCTTCACAAAAGCAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568606       --> ACCAAGATGCGTCAAGCCACTGCACAGGTTTTAGCTTCACAAAAGCAGTT  Raphanus raphanistrum subsp. landra
EV568744       --> ACCAAGATGCGTCAAGCCACTGCACAGGTTTTAGCTTCACAAAAGTAGCT  Raphanus raphanistrum subsp. landra
FY435963       --> ACCAAGATGCGTCAAGCCACTGCACAGGTCTTGGCTTCACAAAAGCAGCT  Raphanus sativus cv GSK3-1
FY435992       --> ACCAAGATGCGTCAAGCCACTGCACAGGTCTTGGCTTCACAAAAGCAGCT  Raphanus sativus cv GSK3-1
FD980686       --> ACCAAGATGCGTCAAGCCACTGCACAGGTTTTAGCTTCACAAAAGCAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714248       --> ACCAAGATGCGTCAAGCCACTGCACAGGTTTTAGCTTCACAAAAGCAGCT  Raphanus sativus var. oleiformis
FD543703       --> ACCAAGATGCGTCAAGCCACTGCACAGGTTTTAGCTTCACAAAAGCAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446257       --> ACCAAGATGCGTCAAGCCACTGCACAGGTCTTGGCTTCACAAAAGCAGCT  Raphanus sativus cv GSK3-1
EY946309       --> ACCAAGATGCGTCAAGCCACTGCACAGGTCTTGGCTTCACAAAAGCAGCT  Raphanus sativus cv Rat-Tail Radish #3870
FD947857       --> ACCAAGATGCGTCAAGCCACTGCACAGGTTTTAGCTTCACAAAAGCAGCT  Raphanus sativus cv Early Scarlet Globe
FD937826       --> ACCAAGATGCGTCAAGCCACTGCACAGGTTTTAGCTTCACAAAAGCAGCT  Raphanus sativus var. oleiformis
EY947502       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD579571       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD965292       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               499    -    549
UN23330        --> GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444423       <-- GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
EW719006       <-- GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
EV543563       <-- GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
EV573290       <-- GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
FD967065       <-- GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
EX760348       <-- GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
EX907681       <-- GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
EW738248       <-- GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
FD984099       <-- GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
EV573398       <-- GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
FD576103       <-- GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGCACAAAA
EV529831       <-- GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
EY942429       <-- GGAGAACAAATATAAAGCTTCAAAGCAATCTTCCGATGATTGGTACAAAA
FD943729       <-- GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
FD976543       <-- ....AACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
FD539481       <-- ..........................................GTACAAAA
EX752694       <-- ............................................ACAAAA
FD538130       <-- ..................................................
FD584384       <-- ..................................................
EY943388       <-- ..................................................
FD961072       <-- ..................................................
FD583533       <-- ..................................................
EY906204       --> GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
EV547746       --> GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
EW735262       --> GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
EX890047       --> GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
EX756564       --> GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
EX903663       --> GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
FD988167       --> GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
FD550578       --> GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
FD557779       --> GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
EV524970       --> GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
FD550524       --> GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
FD970786       --> GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
FD970492       --> GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGCACAAAA
EV568606       --> GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
EV568744       --> GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
FY435963       --> GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
FY435992       --> GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
FD980686       --> GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
EW714248       --> GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
FD543703       --> GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
FY446257       --> GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
EY946309       --> GGAGAACAAATATAAAGCTTCAAAGCAATCTTCCGATGATTGGTACAAAA
FD947857       --> GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
FD937826       --> GGAGAACAAATATAAAGCTTCAAAGCAATCTTCTGATGATTGGTACAAAA
EY947502       --> ..................................................
FD579571       --> ..................................................
FD965292       --> ..................................................

               549    -    599
UN23330        --> GAGCACAACTTGCTCTTGCAAAAGGAGACGAGGATCTTGCACGTGAAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444423       <-- GAGCACAACTTGCTCTTGCTAAAGGAGACGAGGATCTTGCACGTGAAGCC  Raphanus sativus cv GSK3-1
EW719006       <-- GAGCACAACTTGCTCTTGCAAAAGGAGACGAGGATCCTGCACGTGAAGCC  Raphanus sativus var. oleiformis
EV543563       <-- GAGCACAACTTGCTCTTGCAAAAGGAGACGAGGATCTTGCACGTGAAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573290       <-- GAGCACAACTTGCTCTTGCTAAAGGAGACGAGGATCTTGCACGTGAAGCC  Raphanus raphanistrum subsp. landra
FD967065       <-- GAGCACAACTTGCTCTTGCAAAAGGAGACGAGGATCTTGCACGTGAAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760348       <-- GAGCACAACTTGCTCTTGCAAAAGGAGACGAGGATCTTGCACGTGAAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907681       <-- GAGCACAACTTGCTCTTGCAAAAGGAGACGAGGATCTTGCACGTGAAGCC  Raphanus sativus cv Rat-Tail Radish #3870
EW738248       <-- GAGCACAACTTGCTCTTGTAAAAGGAGACGAGGATCTTGCACGTGAAGCT  Raphanus sativus cv Rat-Tail Radish #3870
FD984099       <-- GAGCACAACTTGCTCTTGCTAAAGGATACGAGGATCTTGCACGTGAAGCC  Raphanus raphanistrum subsp. landra
EV573398       <-- GAGCACAACTTGCTCTTGCTAAAGGAGACGAGGATCTTGCACGTGAAGCC  Raphanus raphanistrum subsp. landra
FD576103       <-- GAGCACAACTTGCTCTTGCAAAAGGAGACGAGGATCTTGCACGTGAAGCT  Raphanus sativus cv Early Scarlet Globe
EV529831       <-- GAGCACAACTTGCTCTTGCTAAAGGAGACGAGGATCTTGCACGTGAAGCC  Raphanus raphanistrum subsp. maritimus
EY942429       <-- GAGCACAACTTGCTCTTGCAAAAGGAGACGAGGATCGTGCACGTGAAGCC  Raphanus sativus cv Rat-Tail Radish #3870
FD943729       <-- GAGCACAACTTGCTCTTGCAAAAGGAGACGAGGATCTTGCACGTGAAGCT  Raphanus sativus cv Early Scarlet Globe
FD976543       <-- GAGCACAACTTGCTCTTGCAAAAGGAGACGAGGATCTTGCACGTGAAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539481       <-- GAGCACAACTTGCTCTTGCAAAAAGAGACGAGGATCTTGCACGTGAAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752694       <-- GAGCACAACTTGCTCTTGCTAAAGGAGACGAGGATCTTGCACGTGAAGCC  Raphanus raphanistrum subsp. maritimus
FD538130       <-- .............TCTTGCAAAAGGAGACGAGGATCTTGCACGTGAAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD584384       <-- .....................................TGCACGTGAAGCC  Raphanus sativus cv Rat-Tail Radish #3870
EY943388       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD961072       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583533       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY906204       --> GAGCACAACTTGCTCTTGCAAAAG-AGACGAGGATCTTGCACGTGAAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547746       --> GAGCACAACTTGCTCTTGCAAAAGGAGACGAGGATCTTGCACGTGAAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW735262       --> GAGCACAACTTGCTCTTGTAAAAGGAGACGAGGATCTTGCACGTGAAGCT  Raphanus sativus cv Rat-Tail Radish #3870
EX890047       --> GAGCACAACTTGCTCTTGCAAAAGGAGACGAGGATCTTGCACGTGAAGCC  Raphanus sativus var. oleiformis
EX756564       --> GAGCACAACTTGCTCTTGCAAAAGGAGACGAGGATCTTGCACGTGAAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX903663       --> GAGCACAACTTGCTCTTGCAAAAGGAGACGAGGATCTTGCACGTGAAGCC  Raphanus sativus cv Rat-Tail Radish #3870
FD988167       --> GAGCACAACTTGCTCTTGCTAAAGGATACGAGGATCTTGCACGTGAAGCC  Raphanus raphanistrum subsp. landra
FD550578       --> GAGCACAACTTGCTCTTGCA..............................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557779       --> GAGCACAACTTGCTCTTGCTAAAGGAGATGAGGATCTTGCACGTGAAGCC  Raphanus raphanistrum subsp. landra
EV524970       --> GAGCACAACTTGCTCTTGCTAAAGGAGACGAGGATCTTGCACGTGAAGCC  Raphanus raphanistrum subsp. maritimus
FD550524       --> GAGCACAACTTGCTCTTGCAAAAGGAGACGAGGATCTTGCACGTGAAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970786       --> GAGCACAACTTGCTCTTGCAAAAGGAGACGAGGATCTTGCACGTGAAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970492       --> GAGCACAACTTGCTCTTGCAAAAGGAGACGAGGATCTTGCACGTGAAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568606       --> GAGCACAACTTGCTCTTGCTAAAGGAGACGAGGATCTTGCACGTGAAGCC  Raphanus raphanistrum subsp. landra
EV568744       --> GAGCACAACTTGCTCTTGCTAAAGGAGACGAGGATCTTGCACGTGAAGCC  Raphanus raphanistrum subsp. landra
FY435963       --> GAGCACAACTTGCTCTTGCTAAAGGAGACGAGGATCTTGCACGTGAAGCC  Raphanus sativus cv GSK3-1
FY435992       --> GAGCACAACTTGCTCTTGCTAAAGGAGACGAGGATCTTGCACGTGAAGCC  Raphanus sativus cv GSK3-1
FD980686       --> GAGCACAACTTGCTCTTGCAAAAGGAGACGAGGATCTTGCACGTGAAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714248       --> GAGCACAACTTGCTCTTGCAAAAGGAGACGAGGATCCTGCACGTGAAGCC  Raphanus sativus var. oleiformis
FD543703       --> GAGCACAACTTGCTCTTGCAAAAAGAGACGAGGATCTTGCACGTGAAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446257       --> GAGCACAACTTGCTCTTGCTAAAGGAGACGAGGATCTTGCACGTGAAGCC  Raphanus sativus cv GSK3-1
EY946309       --> GAGCACAACTTGCTCTTGCAAAAGGAGACGAGGATCGTGCACGTGAAGCC  Raphanus sativus cv Rat-Tail Radish #3870
FD947857       --> GAGCACAACTTGCTCTTGCAAAAGGAGACGAGGATCTTGCACGTGAAGCT  Raphanus sativus cv Early Scarlet Globe
FD937826       --> GAGCACAACTTGCTCTTGCAAAAGGAGACGAGGATCTTGCACGTGAAGCC  Raphanus sativus var. oleiformis
EY947502       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD579571       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD965292       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               599    -    649
UN23330        --> CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444423       <-- CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
EW719006       <-- CTTAAACGAAGAAAGTCTTTTTGCTGACAACGCCGCTGCCCTGAAAACTC
EV543563       <-- CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
EV573290       <-- CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
FD967065       <-- CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
EX760348       <-- CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
EX907681       <-- CTTAAACGAAGAAAATCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
EW738248       <-- CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
FD984099       <-- CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
EV573398       <-- CTTAAACGAAGAAAGTCTTTT-GCCGACAACGCTGCTGCCCTGAAAACTC
FD576103       <-- CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
EV529831       <-- CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
EY942429       <-- CTTAAACGAAGAAAATCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
FD943729       <-- CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
FD976543       <-- CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
FD539481       <-- CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
EX752694       <-- CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
FD538130       <-- CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
FD584384       <-- CTTAAACGAAGAAAATCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
EY943388       <-- ..gAAACGAAGAAAATCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
FD961072       <-- ..................................................
FD583533       <-- ..................................................
EY906204       --> CTTAAACGAAGAAAGTCTTTT-GCTGACA-CGCTGCTGCCCTGAAAACTC
EV547746       --> CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
EW735262       --> CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
EX890047       --> CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCCGCTGCCCTGAAAACTC
EX756564       --> CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
EX903663       --> CTTAAACGAAGAAAATCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
FD988167       --> CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
FD550578       --> ..................................................
FD557779       --> CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
EV524970       --> CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
FD550524       --> CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
FD970786       --> CTTAAACGAAGAAAGTCTT...............................
FD970492       --> CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
EV568606       --> CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
EV568744       --> CTTAAACGAAGAAAGTCTTTT-GCCGACAACGCTGCTGCCCTGAAAACTC
FY435963       --> CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
FY435992       --> CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
FD980686       --> CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
EW714248       --> CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCCGCTGCCCTGAAAACTC
FD543703       --> CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
FY446257       --> CTTAA-CGAA-AAAGTCTTTT-G-TGACA-CGCTGCTGCC-TGAAAc...
EY946309       --> CTTAAACGAAGAAAATCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
FD947857       --> CTTAAACGAAGAAAGTCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
FD937826       --> CTCAAACGAAGAAAGTCTTTT-GCTGACAACGCCGCTGCCCTGAAAACTC
EY947502       --> ..gAAACGAAGAAAATCTTTT-GCTGACAACGCTGCTGCCCTGAAAACTC
FD579571       --> ..................................................
FD965292       --> ..................................................

               649    -    699
UN23330        --> AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCAAATACGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444423       <-- AACTAGATCAACAAAAAGGTGTTGTCGACAATCTGGTTTCAAATACGAGG  Raphanus sativus cv GSK3-1
EW719006       <-- AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCGAATACTAGG  Raphanus sativus var. oleiformis
EV543563       <-- AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCAAATACGAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573290       <-- AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCGAATACGAGG  Raphanus raphanistrum subsp. landra
FD967065       <-- AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTTTCAAATACGAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760348       <-- AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCAAATACGAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907681       <-- AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCGAATACGAGG  Raphanus sativus cv Rat-Tail Radish #3870
EW738248       <-- AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCAAATACGAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD984099       <-- AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCGAATACGAGG  Raphanus raphanistrum subsp. landra
EV573398       <-- AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCGAATACGAGG  Raphanus raphanistrum subsp. landra
FD576103       <-- AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCAAATACGAGG  Raphanus sativus cv Early Scarlet Globe
EV529831       <-- AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCGAATACGAGG  Raphanus raphanistrum subsp. maritimus
EY942429       <-- AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCGAATACGAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD943729       <-- AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCAAATACGAGG  Raphanus sativus cv Early Scarlet Globe
FD976543       <-- AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCAAATACGAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539481       <-- AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTTTCAAATACGAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752694       <-- AACTAGATCAACAAAAAGGTGTTGTCGACAATCTGGTTTCAAATACGAGG  Raphanus raphanistrum subsp. maritimus
FD538130       <-- AACTAGATCAGCAAAAAGGTGTTGTCGACGATCTTGTTTCAAATACGAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD584384       <-- AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCGAATACGAGG  Raphanus sativus cv Rat-Tail Radish #3870
EY943388       <-- AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCGAATACGAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD961072       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD583533       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY906204       --> AACTAGATCAGCAAAAA.................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547746       --> AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCAAATACGAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW735262       --> AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCAAATACGAG-  Raphanus sativus cv Rat-Tail Radish #3870
EX890047       --> AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCGAATACGAGG  Raphanus sativus var. oleiformis
EX756564       --> AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCAAATACGAG-  Raphanus raphanistrum subsp. raphanistrum (MS)
EX903663       --> AACTAGATCAGCAAAAAG-TGTTGTCGACAATCTTGTCTCGAATACGAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD988167       --> AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCGAATACGAG-  Raphanus raphanistrum subsp. landra
FD550578       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557779       --> AACTAGATCAGCAAAAA.................................  Raphanus raphanistrum subsp. landra
EV524970       --> AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCGAATACGAG-  Raphanus raphanistrum subsp. maritimus
FD550524       --> AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTTTCAAATACGAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970786       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970492       --> AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTTTCAAATACGAG-  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568606       --> AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCGAATACGAGG  Raphanus raphanistrum subsp. landra
EV568744       --> AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCGAATACGAGG  Raphanus raphanistrum subsp. landra
FY435963       --> AACTAGATCAACAAAAAGGTGTTGTCGACAATCTGGTTTCAAATACGAGG  Raphanus sativus cv GSK3-1
FY435992       --> AACTAGATCAACAAAAAGGTGTTGTCGACAATCTGGTTTCAAATACGAGG  Raphanus sativus cv GSK3-1
FD980686       --> AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCAAATACGAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714248       --> AACTAGATCAGC......................................  Raphanus sativus var. oleiformis
FD543703       --> AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTTTCAAATACGAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446257       --> ..................................................  Raphanus sativus cv GSK3-1
EY946309       --> AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCGAATACGAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD947857       --> AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCAAATACGAGG  Raphanus sativus cv Early Scarlet Globe
FD937826       --> AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCGAATACGAGG  Raphanus sativus var. oleiformis
EY947502       --> AACTAGATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCGAATACGAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD579571       --> .....GATCAGCAAAAAGGTGTTGTCGACAATCTTGTCTCGAATACGAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD965292       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               699    -    749
UN23330        --> TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444423       <-- TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
EW719006       <-- TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
EV543563       <-- TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
EV573290       <-- TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
FD967065       <-- TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
EX760348       <-- TTATTGGAGAGCGAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
EX907681       <-- TTATTGGAGAGCGAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
EW738248       <-- TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
FD984099       <-- TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
EV573398       <-- TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
FD576103       <-- TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
EV529831       <-- TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
EY942429       <-- TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
FD943729       <-- TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
FD976543       <-- TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
FD539481       <-- TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
EX752694       <-- TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
FD538130       <-- TTATTGGAGAGCAAGATTCAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
FD584384       <-- TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
EY943388       <-- TTATTGGAGAGCAAGATACAAGAGGCAAAAGGAAAGAAAGATACGCTCCT
FD961072       <-- ggATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
FD583533       <-- .....GGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
EY906204       --> ..................................................
EV547746       --> TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
EW735262       --> TTATTGGAGAGCA-GATACA-GAG-CAAA-GCAAAGAA-GATACGCTCCT
EX890047       --> TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
EX756564       --> TTATTGGAGAGCGAGATACAAG............................
EX903663       --> TTATTGGAGAGCGAGATACAAGA...........................
FD988167       --> TTATTGGAGAGCAAGATACAAG............................
FD550578       --> ..................................................
FD557779       --> ..................................................
EV524970       --> TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
FD550524       --> TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
FD970786       --> ..................................................
FD970492       --> TTATTGGAGAGCAAGATACAAGAG-CAAAAGCAAAGAAAGATACGCTCCT
EV568606       --> TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
EV568744       --> TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
FY435963       --> TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
FY435992       --> TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
FD980686       --> TTATTGGAGAGCAAGATACA..............................
EW714248       --> ..................................................
FD543703       --> TTATTGGAGAGCAAGAT.................................
FY446257       --> ..................................................
EY946309       --> TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
FD947857       --> TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
FD937826       --> TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
EY947502       --> TTATTGGAGAGCAAGATACAAGAGGCAAAAGGAAAGAAAGATACGCTCCT
FD579571       --> TTATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT
FD965292       --> ggATTGGAGAGCAAGATACAAGAGGCAAAAGCAAAGAAAGATACGCTCCT

               749    -    799
UN23330        --> TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTTCAAGAGATGATAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444423       <-- TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTTCAAGAGATGATAG  Raphanus sativus cv GSK3-1
EW719006       <-- TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTTCAAGAGATGATAG  Raphanus sativus var. oleiformis
EV543563       <-- TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTTCAAGAGATGATAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573290       <-- TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTCCAAGAGATGATAG  Raphanus raphanistrum subsp. landra
FD967065       <-- TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTTCAAGAGATGATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760348       <-- TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTTCAAGAGATGATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907681       <-- TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTTCAAGAGATGATAG  Raphanus sativus cv Rat-Tail Radish #3870
EW738248       <-- TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTTCAAGAGATGATAG  Raphanus sativus cv Rat-Tail Radish #3870
FD984099       <-- TGCACGTGCTCTCACTGCTAAGACTGCAACCAAAGTCCAAGAGATGATAG  Raphanus raphanistrum subsp. landra
EV573398       <-- TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTCCAAGAGATGATAG  Raphanus raphanistrum subsp. landra
FD576103       <-- TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTTCAAGAGATGATAG  Raphanus sativus cv Early Scarlet Globe
EV529831       <-- TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTCCAAGAGATGATAG  Raphanus raphanistrum subsp. maritimus
EY942429       <-- TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTTCAAGAGATGATAG  Raphanus sativus cv Rat-Tail Radish #3870
FD943729       <-- TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTTCAAGAGATGATAG  Raphanus sativus cv Early Scarlet Globe
FD976543       <-- TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTTCAAGAGATGATAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539481       <-- TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTTCAAGAGATGATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752694       <-- TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTTCAAGAGATGATAG  Raphanus raphanistrum subsp. maritimus
FD538130       <-- TGCACGTGCTCGCACTGCTAAGGCTGCAACCAAAGTTCAAGAGATGATAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD584384       <-- TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTTCAAGAGATGATAG  Raphanus sativus cv Rat-Tail Radish #3870
EY943388       <-- TGCACGTGCTCGCACTGCTAAGGCTGCAACCAAAGTTCAAGAGATGATAG  Raphanus sativus cv Rat-Tail Radish #3870
FD961072       <-- TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTTCAAGAGATGATAG  Raphanus raphanistrum subsp. maritimus
FD583533       <-- TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTTTAAGAGATGATAG  Raphanus sativus cv Rat-Tail Radish #3870
EY906204       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547746       --> TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTTCAAGAGATGATAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW735262       --> TGCACGTGCTCGCACTGCTA..............................  Raphanus sativus cv Rat-Tail Radish #3870
EX890047       --> TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTTCAAGAGATGATAG  Raphanus sativus var. oleiformis
EX756564       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX903663       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD988167       --> ..................................................  Raphanus raphanistrum subsp. landra
FD550578       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557779       --> ..................................................  Raphanus raphanistrum subsp. landra
EV524970       --> TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTCCAAGAGATGATAG  Raphanus raphanistrum subsp. maritimus
FD550524       --> TGCACGTGCTCGCACTGCTAAGACTGCA-CCAAAGTTCAAGAGATGATAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970786       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970492       --> TGCACGTGCTCGCACTGCTAAGACTGCAAC-AAAGT-CAAGAGATG....  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568606       --> TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTCCAAGA........  Raphanus raphanistrum subsp. landra
EV568744       --> TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTCCAAGAGATGATAG  Raphanus raphanistrum subsp. landra
FY435963       --> TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTTCAAGAGATGATAG  Raphanus sativus cv GSK3-1
FY435992       --> TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTTCAAGAGATGATAG  Raphanus sativus cv GSK3-1
FD980686       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714248       --> ..................................................  Raphanus sativus var. oleiformis
FD543703       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446257       --> ..................................................  Raphanus sativus cv GSK3-1
EY946309       --> TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTTCAAGAGATGATAG  Raphanus sativus cv Rat-Tail Radish #3870
FD947857       --> TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTTCAAGAGATGATAG  Raphanus sativus cv Early Scarlet Globe
FD937826       --> TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTTCAAGAGATGATAG  Raphanus sativus var. oleiformis
EY947502       --> TGCACGTGCTCGCACTGCTAAGGCTGCAACCAAAGTTCAAGAGATGATAG  Raphanus sativus cv Rat-Tail Radish #3870
FD579571       --> TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTTTAAGAGATGATAG  Raphanus sativus cv Rat-Tail Radish #3870
FD965292       --> TGCACGTGCTCGCACTGCTAAGACTGCAACCAAAGTTCAAGAGATGATAG  Raphanus raphanistrum subsp. maritimus

               799    -    849
UN23330        --> GGACAGTGAATACAAGCGGTGCTCTCTCAGCCTTTGAGAAAATGGAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444423       <-- GGACAGTGAATACAAGCGGTGCTCTCTCAGCCTTTGAGAAAATGGAGGAG
EW719006       <-- GGACAGTGAATACAAGCGGTGCTCTCTCAGCCTTTGAGAAAATGGAGGAG
EV543563       <-- GGACAGTGAATACAAGCGGTGCTCTCTCAGCCTTTGAGAAAATGGAGGAG
EV573290       <-- GGACAGTGAATACAAGCGGTGCTCTCTCAGCCTTTGAGAAAATGGAGGAG
FD967065       <-- GGACAGTGAATACAAGCGGTGCTCTCTCAGCCTTTGAGAAAATGGAGGAG
EX760348       <-- GGACAGTGAATACAAGCGGTGCTCTATCAGCCTTTGAGAAAATGGAGGAG
EX907681       <-- GGACAGTGAATACAAGCGGTGCTCTCTCAGCCTTTGAGAAAATGGAGGAG
EW738248       <-- GGACAGTGAATACAAGCGGTGCTCTCTCAGCCTTTGAGAAAATGGAGGAG
FD984099       <-- GGACAGTGAATACAAGCGGTGCTCTCTCAGCCTTTGAGAAAATGGAGGAG
EV573398       <-- GGACAGTGAATACAAGCGGTGCTCTCTCAGCCTTTGAGAAAATGGAGGAG
FD576103       <-- GGACAGTGAATACAAGCGGTGCTCTTTCAGCCTTTGAGAAAATGGAGGAG
EV529831       <-- GGACAGTGAATACAAGCGGTGCTCTCTCAGCCTTTGAGAAAATGGAGGAG
EY942429       <-- GGACAGTGAATACAAGCGGTGCTCTCTCAGCCTTTGAGAAAATGGAGGAG
FD943729       <-- GGACAGTGAATACAAGCGGTGCTCTCTCAGCCTTTGAGAAAATGGAGGAG
FD976543       <-- GGACAGTGAATACAAGCGGTGCTCTCTCAGCCTTTGAGAAAATGGAGGAG
FD539481       <-- GGACAGTGAATACAAGCGGTGCTCTCTCAGCCTTTGAGAAAATGGAGGAG
EX752694       <-- GGACAGTGAATACAAGCGGTTCTCTCCCAGCCTTTGAGAAAATGGAGGAG
FD538130       <-- GGACAGTGATTACAAGCGGTGCTCTATCAGCCTTTGAGAAAATGGAGGAG
FD584384       <-- GGACAGTGAATACAAGCGGTGCTCTTTCAGCCTTTGAGAAAATGGAGGAG
EY943388       <-- GGACAGTGAATACAAGCGGTGCTCTCTCAGCCTTTGAGAAAATGGAGGAG
FD961072       <-- GGACAGTGAATACAAGCGGTGCTCTCTCAGCCTTTGAGAAAATGGAGGAG
FD583533       <-- GGACAGTGAATACAAGCGGTGCTCTTTCAGCCTTTGAGAAAATGGAGGAG
EY906204       --> ..................................................
EV547746       --> GGACAGTGAATACAAGCG-TGCTCTCTCAGCCTTTGAGAAA-TGGAG-AG
EW735262       --> ..................................................
EX890047       --> GGACAGTGAAT.......................................
EX756564       --> ..................................................
EX903663       --> ..................................................
FD988167       --> ..................................................
FD550578       --> ..................................................
FD557779       --> ..................................................
EV524970       --> GGACAGTGAATACAAGCGGTGCTCTCT.......................
FD550524       --> GGACAGTGAATACA....................................
FD970786       --> ..................................................
FD970492       --> ..................................................
EV568606       --> ..................................................
EV568744       --> GGACAGTGAATACAAGCGGTGCTCTCTCAGCCTTTGAGA...........
FY435963       --> GGACAGTGAATACAAGCGGTGCTCTCTCAGCCTTTGAGAAAATGGAGGAG
FY435992       --> GGACAGTGAATACAAGCGGTGCTCTCTCAGCCTTTGAGAAAATGGAGGAG
FD980686       --> ..................................................
EW714248       --> ..................................................
FD543703       --> ..................................................
FY446257       --> ..................................................
EY946309       --> GGACAGTGAATACAAGCGGTGCTCTCTCAGC-TTTGAGAAA-TGGAGGAG
FD947857       --> GGACAGTGAATACAAGCGGTGCTCTCTCAGCCTTTGAGAAAATGGAGGAG
FD937826       --> GGACAGTGAATACAAGCGGTGCTCTCTCAGCCTTTGAGAAAATGGAGGAG
EY947502       --> GGACAGTGAATACAAGCGGTGCTCTCTCAGCCTTTGAGAAAATGGAGGAG
FD579571       --> GGACAGTGAATACAAGCGGTGCTCTCTCAGCCTTTGAGAAAATGGAGGAG
FD965292       --> GGACAGTGAATACAAGCGGTGCTCTCTCAGCCTTTGAGAAAATGGAGGAG

               849    -    899
UN23330        --> AAAGTGATGGCTATGGAGTCTGAAGCAGATGCACTTACTCAGATTGGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444423       <-- AAAGTGATGGCTATGGAGTCTGAAGCAGATGCACTTACTCAGATTGGAAC  Raphanus sativus cv GSK3-1
EW719006       <-- AAAGTGATGGCTATGGAGTCTGAAGCAGATGCACTTACTCAGATTGGAAC  Raphanus sativus var. oleiformis
EV543563       <-- AAAGTGATGGCTATGGAGTCTGAAGCAGATGCACTTACTCAGATTGGAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573290       <-- AAAGTGATGGCTATGGAGTCTGAAGCAGATGCACTTACTCAGATTGGAAC  Raphanus raphanistrum subsp. landra
FD967065       <-- AAAGTGATGGCTATGGAGTCTGGAGCAGATGCACTTACTCAGATTGGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760348       <-- AAAGTGATGGCTATGGAGTCTGAAGCAGATGCGCTTACTCAGATTGGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907681       <-- AAAGTGATGGCTATGGAGTCTGAAGCAGATGCACTTACTCAGATTGGAAC  Raphanus sativus cv Rat-Tail Radish #3870
EW738248       <-- AAAGTGATGGCTATGGAGTCTGAAGCAGATGCACTTACTCAGATTGGAAC  Raphanus sativus cv Rat-Tail Radish #3870
FD984099       <-- AAAGTGATGGCTATGGAGTCTGAAGCAGATGCACTTACTCAGATTGGAAC  Raphanus raphanistrum subsp. landra
EV573398       <-- AAAGTGATGGCTATGGAGTCTGAAGCAGATGCGCTTACTCAGATTGGAAC  Raphanus raphanistrum subsp. landra
FD576103       <-- AAAGTGATGGCTATGGAGTCTGAAGCAGATGCACTTACTCAGATTGGAAC  Raphanus sativus cv Early Scarlet Globe
EV529831       <-- AAAGTGATGGCTATGGAGTCTGAAGCAGATGCACTTACTCAGATTGGAAC  Raphanus raphanistrum subsp. maritimus
EY942429       <-- AAAGTGATGGCTATGGAGTCTGAAGCAGATGCACTTACTCAGATTGGAAC  Raphanus sativus cv Rat-Tail Radish #3870
FD943729       <-- AAAGTGATGGCTATGGAGTCTGAAGCAGATGCACTTACTCAGATTGGAAC  Raphanus sativus cv Early Scarlet Globe
FD976543       <-- AAAGTGATGGCTATGGAATCTGAAGCAGATGCACTTACTCAGATTGGAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539481       <-- AAAGTGATGGCTATGGAGTTTGAAGCAGATGCACTTACTCAGATTGGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752694       <-- AAAGTGATGGCTATGGAGTTTGAAGCAGATGCACTTACTCAGATTGGAAC  Raphanus raphanistrum subsp. maritimus
FD538130       <-- AAAGTGATGGCTATGGAGTCTGAAGCAGATGCACTTACTCAGATTGGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD584384       <-- AAAGTGATGGCTATGGAGTTTGAAGCAGATGCACTTACTCAGATTGGAAC  Raphanus sativus cv Rat-Tail Radish #3870
EY943388       <-- AAAGTGATGGCTATGGAGTCTGAAGCAGATGCACTTACTCAGATTGGAAC  Raphanus sativus cv Rat-Tail Radish #3870
FD961072       <-- AAAGTGATGGCTATGGAGTCTGAAGCAGATGCACTTACTCAGATTGGAAC  Raphanus raphanistrum subsp. maritimus
FD583533       <-- AAAGTGATGGCTATGGAGTTTGAAGCAGATGCACTTACTCAGATTGGAAC  Raphanus sativus cv Rat-Tail Radish #3870
EY906204       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547746       --> AAAGTGATGGCTATGGAGTCTGA-GCAGATGCACTTACTCA.........  Raphanus raphanistrum subsp. raphanistrum (NY)
EW735262       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX890047       --> ..................................................  Raphanus sativus var. oleiformis
EX756564       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX903663       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD988167       --> ..................................................  Raphanus raphanistrum subsp. landra
FD550578       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557779       --> ..................................................  Raphanus raphanistrum subsp. landra
EV524970       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD550524       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970786       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970492       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568606       --> ..................................................  Raphanus raphanistrum subsp. landra
EV568744       --> ..................................................  Raphanus raphanistrum subsp. landra
FY435963       --> AAAGTGATGGCTATGGAGTCTGAAGCAGATGCACTTACTC..........  Raphanus sativus cv GSK3-1
FY435992       --> AAAGTGATGGCTATGGAGTCTGAAGCAGATGCACTTACTCAGATTGGAAC  Raphanus sativus cv GSK3-1
FD980686       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714248       --> ..................................................  Raphanus sativus var. oleiformis
FD543703       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446257       --> ..................................................  Raphanus sativus cv GSK3-1
EY946309       --> AA-GTGATGGCTATGGAGTCTGA-GCAGATGCACT-ACTCAGATggacga  Raphanus sativus cv Rat-Tail Radish #3870
FD947857       --> AAAGTGATGGCTATGGAGTCTGAAGCAGATGCACTTACTCAGATTGGAAC  Raphanus sativus cv Early Scarlet Globe
FD937826       --> AAAGTGATGGCTATGGAGTCTGAAGCAGATGCACTTACTC-GATTGGAAC  Raphanus sativus var. oleiformis
EY947502       --> AAAGTGATGGCTATGGAGTCTGAAGCAGATGCACTTACTCAGATTGGAAC  Raphanus sativus cv Rat-Tail Radish #3870
FD579571       --> AAAGTGATGGCTATGGAGTCTGAAGCAGATGCACTTACTCAGATTGGAAC  Raphanus sativus cv Rat-Tail Radish #3870
FD965292       --> AAAGTGATGGCTATGGAGTCTGAAGCAGATGCACTTACTCAGATTGGAAC  Raphanus raphanistrum subsp. maritimus

               899    -    949
UN23330        --> GGATGAACTCGAGGGAAAGTTTCAAATGCTTGAAACTTCATCTGTGGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444423       <-- GGATGAACTCGAGGGAAAGTTTCAAATGCTTGAAACTTCATCTGTGGATG  Raphanus sativus cv GSK3-1
EW719006       <-- GGATGAACTCGAGGGAAAGTTTCAAATGCTTGAAACTTCATCTGTGGATG  Raphanus sativus var. oleiformis
EV543563       <-- AGATGAACTCGAGGGAAAGTTTCAAATGCTTGAAACTTCATCTGTGGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573290       <-- GGATGAACTCGAGGGAAAGTTTCAAATGCTTGAAACTTCATCTGTGGATG  Raphanus raphanistrum subsp. landra
FD967065       <-- AGATGAACTCGAGGGAAAGTTTCAAATGCTTGAAACTTCATCTGTGGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760348       <-- GGATGAACTCGAGGGAAAGTTTCAAATGCTTGAAACTTCATCTGTGGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907681       <-- GGATGAACTCGAGGGAAAGTTTCAAATGCTTGAAACTTCATCTGTGGATG  Raphanus sativus cv Rat-Tail Radish #3870
EW738248       <-- AGATGAACTCGAGGGAAAGTTTCAAATGCTTGAAACTTCATCTGTGGATG  Raphanus sativus cv Rat-Tail Radish #3870
FD984099       <-- GGATGAACTCGAGGGAAAGTTTCAAATGCTTGAAACTTCATCTGTGGATG  Raphanus raphanistrum subsp. landra
EV573398       <-- GGATGAACTTGAGGGAAAGTTTCAAATGCTTGAAACTTCATCTGTGGATG  Raphanus raphanistrum subsp. landra
FD576103       <-- AGATGAACTCGAGGGAAAGTTTCAAATGCTTGAAACTTCATCTGTGGATG  Raphanus sativus cv Early Scarlet Globe
EV529831       <-- GGATGAACTCGAGGGAAAGTTTCAAATGCTTGAAACTTCATCTGTGGATG  Raphanus raphanistrum subsp. maritimus
EY942429       <-- GGATGAACTCGAGGGAAAGTTTCAAATGCTTGAAACTTCATCTGTGGATG  Raphanus sativus cv Rat-Tail Radish #3870
FD943729       <-- AGATGAACTCGAGGGAAGGTTTCAAATGCTTGAAACTTCATCTGTGGATG  Raphanus sativus cv Early Scarlet Globe
FD976543       <-- AGATGAACTCGAGGGAAAGTTTCAAATGCTTGAAACTTCATCTGTGGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539481       <-- AGATGAACTCGAGGGAAAGTTTCAAATGCTTGAAACTTCATCTGTGGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752694       <-- GGATGAACTCGAGGGAAAGTTTCAAATGCTTGAAACTTCATCTGTGGATG  Raphanus raphanistrum subsp. maritimus
FD538130       <-- AGATGAACTCGAGGGAAAGTTTCAAATGCTTGAAACTTCATCTGTGGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD584384       <-- GGATGAACTCGAGGGAAAGTTTCAAATGCTTGAAACTTCATCTGTGGATG  Raphanus sativus cv Rat-Tail Radish #3870
EY943388       <-- GGATGAACTCGAGGGAAAGTTTCAAATGCTTGAAACTTCATCTGTGGATG  Raphanus sativus cv Rat-Tail Radish #3870
FD961072       <-- GGATGAACTCGAGGGAAAGTTTCAAATGCTTGAAACTTCATCTGTGGATG  Raphanus raphanistrum subsp. maritimus
FD583533       <-- GGATGAACTCGAGGGAAAGTTTCAAATGCTTGAAACTTCATCTGTGGATG  Raphanus sativus cv Rat-Tail Radish #3870
EY906204       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547746       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW735262       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX890047       --> ..................................................  Raphanus sativus var. oleiformis
EX756564       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX903663       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD988167       --> ..................................................  Raphanus raphanistrum subsp. landra
FD550578       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557779       --> ..................................................  Raphanus raphanistrum subsp. landra
EV524970       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD550524       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970786       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970492       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568606       --> ..................................................  Raphanus raphanistrum subsp. landra
EV568744       --> ..................................................  Raphanus raphanistrum subsp. landra
FY435963       --> ..................................................  Raphanus sativus cv GSK3-1
FY435992       --> GGATGAACTCGAGGGAAAGTTTCAAATGCTTGAAACTTCATCTGTGGATG  Raphanus sativus cv GSK3-1
FD980686       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714248       --> ..................................................  Raphanus sativus var. oleiformis
FD543703       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446257       --> ..................................................  Raphanus sativus cv GSK3-1
EY946309       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD947857       --> AGATGAACTCGAGGGAAGGTTTCAAATGCTTGAAACTTCATCTGTGGATG  Raphanus sativus cv Early Scarlet Globe
FD937826       --> GGATGAACTCGAGGGAAAGTTTCAAATGCTTGAAACTTCATCTGTGGATG  Raphanus sativus var. oleiformis
EY947502       --> GGATGAACTCGAGGGAAAGTTTCAAATGCTTGAAACTTCATCTGTGGATG  Raphanus sativus cv Rat-Tail Radish #3870
FD579571       --> GGATGAACTCGAGGGAAAGTTTCAAATGCTTGAAACTTCATCTGTGGATG  Raphanus sativus cv Rat-Tail Radish #3870
FD965292       --> GGATGAACTCGAGGGAAAGTTTCAAATGCTTGAAACTTCATCTGTGGATG  Raphanus raphanistrum subsp. maritimus

               949    -    999
UN23330        --> ATGATCTTGCAAAGTTGAAGAATGAGTTGTCCGGAAGCTCAAAGAAAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444423       <-- ATGATCTTGCAAAGTTGAAGAATGAGTTGTCCGGAAGCTCAAAGAAAGGA  Raphanus sativus cv GSK3-1
EW719006       <-- ATGATCTTGCAAAGTTGAAGAATGAGTTGTCCGGAAGCTCAAAGAAAGGA  Raphanus sativus var. oleiformis
EV543563       <-- ATGATCTTGCAAAGTTGAAGAATGAGTTGTCTGGAAGCTCAAAGAAAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573290       <-- ATGATCTTGCGAAGTTGAAGAATGAGTTGTCCGGAAGCTCAAAGAAAGGA  Raphanus raphanistrum subsp. landra
FD967065       <-- ATGATCTTGCAAAGTTGAAGAATGAGTTGTCCGGAAGCTCAAAGAAAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760348       <-- ATGATCTTGCAAAGTTGAAGAATGAGTTGTCTGGAAGCTCAAAGAAAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907681       <-- ATGATCTTGCAAAGTTGAAGAATGAGTTGTCCGGAAGCTCAAAGAAAGGA  Raphanus sativus cv Rat-Tail Radish #3870
EW738248       <-- ATGATCTTGCAAAGTTGAAGAATGAGTTGTCTGGAAGCTCAAAGAAAGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD984099       <-- ATGATCTTGCAAAGTTGAAGAATGAGTTGTCCGGAAGCTCAAAGAAAGGA  Raphanus raphanistrum subsp. landra
EV573398       <-- ATGATCTTGCAAAGTTGAAGAATGAGTTGTCCGGAAGCTCAAAGAAAGGA  Raphanus raphanistrum subsp. landra
FD576103       <-- ATGATCTTGCAAAGTTGAAGAATGAGTTGTCTGGAAGCTCAAAGAAAGGA  Raphanus sativus cv Early Scarlet Globe
EV529831       <-- ATGATCTTGCAAAGTTGAAGAATGAGTTGTCCGGAAGCTCAAAGAAAGGA  Raphanus raphanistrum subsp. maritimus
EY942429       <-- ATGATCTTGCAAAGTTGAAGAATGAGTTGTCCGGAAGCTCAAAGAAAGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD943729       <-- ATGATCTTGCAAAGTTGAAGAATGAGTTGTCTGGAAGCTCAAAGAAAGGA  Raphanus sativus cv Early Scarlet Globe
FD976543       <-- ATGATCTTGCAAAGTTGAAGAATGAGTTGTCTGGAAGCTCAAAGAAAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539481       <-- ATGATCTTGCAAAGTTGAAGAATGAGTTGTCCGGAAGCTCAAAGAAAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752694       <-- ATGATCTTGCAAAGTTGAAGAATGAGTTGTCCGGAAGCTCAAAGAAAGGA  Raphanus raphanistrum subsp. maritimus
FD538130       <-- ATGATCTTGCAAAGTTGAAGAATGAGTTGTCCGGAAGCTCAAAGAAAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD584384       <-- ATGATCTTGCAAAGTTGAAGAATGAGTTGTCCGGAAGCTCAAAGAAAGGA  Raphanus sativus cv Rat-Tail Radish #3870
EY943388       <-- ATGATCTTGCAAAGTTGAAGAATGAGTTGTCCGGAAGCTCAAAGAAAGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD961072       <-- ATGATCTTGCAAAGTTGAAGAATGAGTTGTCCGGAAGCTCAAAGAAAGGA  Raphanus raphanistrum subsp. maritimus
FD583533       <-- ATGATCTTGCAAAGTTGAAGAATGAGTTGTCCGGAAGCTCAAAGAAAGGA  Raphanus sativus cv Rat-Tail Radish #3870
EY906204       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547746       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW735262       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX890047       --> ..................................................  Raphanus sativus var. oleiformis
EX756564       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX903663       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD988167       --> ..................................................  Raphanus raphanistrum subsp. landra
FD550578       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557779       --> ..................................................  Raphanus raphanistrum subsp. landra
EV524970       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD550524       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970786       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970492       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568606       --> ..................................................  Raphanus raphanistrum subsp. landra
EV568744       --> ..................................................  Raphanus raphanistrum subsp. landra
FY435963       --> ..................................................  Raphanus sativus cv GSK3-1
FY435992       --> ..................................................  Raphanus sativus cv GSK3-1
FD980686       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714248       --> ..................................................  Raphanus sativus var. oleiformis
FD543703       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446257       --> ..................................................  Raphanus sativus cv GSK3-1
EY946309       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD947857       --> ATGATCTTGCAAAGTTGAAGAATGAGTTGTCTGGAAGCTCAAAGAAAGGA  Raphanus sativus cv Early Scarlet Globe
FD937826       --> ATGATCTTGCAAAGTTGAAGAATGAGTTGTCCGGAAGCTCAAAGAAAGGA  Raphanus sativus var. oleiformis
EY947502       --> ATGATCTTGCAAAGTTGAAGAATGAGTTGTCCGGAAGCTCAAAGAAAGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD579571       --> ATGATCTTGCAAAGTTGAAGAATGAGTTGTCCGGAAGCTCAAAGAAAGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD965292       --> ATGATCTTGCAAAGTTGAAGAATGAGTTGTCCGGAAGCTCAAAGAAAGGA  Raphanus raphanistrum subsp. maritimus

               999    -   1049
UN23330        --> GAGCTTCCTCCAGGGAGAAGCACGGTCGCAGCAAACACAGGATACCCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444423       <-- GAGCTTCCTCCAGGGAGAAGCACGGTCGCAGCAAACACAGGATACCCATT  Raphanus sativus cv GSK3-1
EW719006       <-- GAGCTTCCTCCAGGGAGAAGCACGGTCGCAGCAAACACAGGATACCCATT  Raphanus sativus var. oleiformis
EV543563       <-- GAGCTTCCTCCAGGGAGAAGCACGGTCGCAGCAAGCACAGGATACCCATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573290       <-- GAGCTTCCTCCAGGGAGAAGCACGGTCGCAGCAAACACGGGATACCCATT  Raphanus raphanistrum subsp. landra
FD967065       <-- GAGCTTCCTCCAGGGAGAAGCACGGTCGCAGCAAACACAGGATACCCATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760348       <-- GAGCTTCCTCCAGGGAGAAGCACGGTCGCAGCAAGCACAGGATACCCATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907681       <-- GAGCTTCCTCCAGGGAGAAGCACGGTCGCAGCAAACACAGGATACCCATT  Raphanus sativus cv Rat-Tail Radish #3870
EW738248       <-- GAGCTTCCTCCAGGGAGAAGCACGGTCGCAGCAAGCACAGGATACCCATT  Raphanus sativus cv Rat-Tail Radish #3870
FD984099       <-- GAGCTTCCTCCAGGGAGAAGCACGGTCGCAGCAAACACGGGATACCCATT  Raphanus raphanistrum subsp. landra
EV573398       <-- GAGTTTCCTCCAGGGAGAAGCACGGTCGCAGCAAGCACAGGATACCCATT  Raphanus raphanistrum subsp. landra
FD576103       <-- GAGCTTCCTCCAGGGAGAAGCACGGTCGCAGCAAGCACAGGATACCCATT  Raphanus sativus cv Early Scarlet Globe
EV529831       <-- GAGCTTCCTCCAGGGAGAAGCACGGTCGCAGCAAACACAGGATACCCATT  Raphanus raphanistrum subsp. maritimus
EY942429       <-- GAGCTTCCTCCAGGGAGAAGCACGGTCGCAGCAAACACAGGATACCCATT  Raphanus sativus cv Rat-Tail Radish #3870
FD943729       <-- GAGCTTCCTCCAGGGAGAAGCACGGTCGCAGCAAGCACAGGATACCCATT  Raphanus sativus cv Early Scarlet Globe
FD976543       <-- GAGCTTCCTCCAGGGAGAAGCACGGTCGCAGCAAGCACAGGATACCCATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539481       <-- GAGCTTCCTCCAGGGAGAAGCACGGTCGCAGCAAACACAGGATACCCATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752694       <-- GAGCTTCCTCCAGGGAGAAGCACGGTCGCAGCAAACACAGGATACCCATT  Raphanus raphanistrum subsp. maritimus
FD538130       <-- GAGCTTCCTCCAGGGAGAAGCACGGTCGCAGCAAACACAGGATACCCATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD584384       <-- GAGCTTCCTCCAGGGAGAAGCACGGTCGCAGCAAACACAGGATACCCATT  Raphanus sativus cv Rat-Tail Radish #3870
EY943388       <-- GAGCTTCCTCCAGGGAGAAGCACGGTCGCAGCAAACACAGGATACCCATT  Raphanus sativus cv Rat-Tail Radish #3870
FD961072       <-- GAGCTTCCTCCAGGGAGAAGCACGGTCGCAGCAAACACAGGATACCCATT  Raphanus raphanistrum subsp. maritimus
FD583533       <-- GAGCTTCCTCCAGGGAGAAGCACGGTCGCAGCAAACACAGGATACCCATT  Raphanus sativus cv Rat-Tail Radish #3870
EY906204       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547746       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW735262       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX890047       --> ..................................................  Raphanus sativus var. oleiformis
EX756564       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX903663       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD988167       --> ..................................................  Raphanus raphanistrum subsp. landra
FD550578       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557779       --> ..................................................  Raphanus raphanistrum subsp. landra
EV524970       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD550524       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970786       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970492       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV568606       --> ..................................................  Raphanus raphanistrum subsp. landra
EV568744       --> ..................................................  Raphanus raphanistrum subsp. landra
FY435963       --> ..................................................  Raphanus sativus cv GSK3-1
FY435992       --> ..................................................  Raphanus sativus cv GSK3-1
FD980686       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714248       --> ..................................................  Raphanus sativus var. oleiformis
FD543703       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY446257       --> ..................................................  Raphanus sativus cv GSK3-1
EY946309       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD947857       --> GAGCTTCCTCCAGGGAGAAGCACGGTCGCAGCAAGCACAG-ATACC-ATT  Raphanus sativus cv Early Scarlet Globe
FD937826       --> GAGCTTCCTCCAGGGAGAAGCACGGTCGCAGCAAACACAGGATACCCATT  Raphanus sativus var. oleiformis
EY947502       --> GAGCTTCCTCCAGGGAGAAGCACGGTCGCAGCAAACACAGGATACCCATT  Raphanus sativus cv Rat-Tail Radish #3870
FD579571       --> GAGCTTCCTCCAGGGAGAAGCACGGTCGCAGCAAACACAGGATACCCATT  Raphanus sativus cv Rat-Tail Radish #3870
FD965292       --> GAGCTTCCTCCAGGGAGAAGCACGGTCGCAGCAAACACAGGATACCCATT  Raphanus raphanistrum subsp. maritimus

               1049   -   1099
UN23330        --> CAAGGACTCTGAGATCGAGAACGAGTTAAACGAATTACGAAGGAAAGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444423       <-- CAAGGACTCTGAGATCGAGAACGAGTTAAACGAATTACGAAGGAAAGCTA
EW719006       <-- CAAGGACTCGGAGATCGAGAACGAGTTAAACGAATTACGAAGGAAAGCTA
EV543563       <-- CAAGGACTCGGAGATCGAGAGCGAGTTAAACGAATTACTAAGGAAAGCTA
EV573290       <-- CAAGGACTCGGAGATCGAGAACGAGTTAAACGAATTACGAAGGAAAGCTA
FD967065       <-- CAAGGACTCTGAGATCGAGAACGAGTTAAACGAATTACGAAGGAAAGCTA
EX760348       <-- CAAGGACTCGGAGATCGAGAACGAGTTAAACCAATTACGAAGGAAAGCTA
EX907681       <-- CAAGGACTCTGAGATCGAGAACGAGTTAAACGAATTACGAAGGAAAGCTA
EW738248       <-- CAAGGACTCGGAGATCTAGAACGAGTTAAACGAATTACGAAGGAAAGCTA
FD984099       <-- CAAGGACTCGGAGATCGAGAACGAGTTAAACGAATTACGAAGGAAAGCTA
EV573398       <-- CAAGGACTCTGAGATCGAGAACGAGTTAAACGAATTACGAAGGAAAGCTA
FD576103       <-- CAAGGACTCGGAGATCGAGAACGAGTTAAACGAATTACGAAGGAAAGCTA
EV529831       <-- CAAGGACTCGGAGATCGAGAACGAGTTAAACGAATTACGAAGGAAAGCTA
EY942429       <-- CAAGGACTCTGAGATCGAGAACGAGTTAAACGAATTACGAAGGAAAGCTA
FD943729       <-- CAAGGACTCGGAGATCGAGAACGAGTTAAACGAATTACGAAGGAAAGCTA
FD976543       <-- CAAGGACTCGGAGATCGAGAACGAGTTAAACGAATTACGAAGGAAAGCTA
FD539481       <-- CAAGGACTCTGAGATCGAGAACGAGTTAAACGAATTACGAAGGAAAGCTA
EX752694       <-- CAAGGACTCTGAGATCGAGAACGAGTTAAACGAATTACGAAGGAAAGCTA
FD538130       <-- CAAGGACTCTGAGATCGAGAACGAGTTAAACGAATTACGAAGGAAAGCTA
FD584384       <-- CAAGGACTTTGAGATCGAGAACGAGTTAAACGAATTACGAAGGAAAGCTA
EY943388       <-- CAAGGACTCTGAGATCGAGAACGAGTTAAACGAATTACGAAGGAAAGCTA
FD961072       <-- CAAGGACTCCGAGATCGAGAACGAGTTAAACGAATTACGAAGGAAAGCTA
FD583533       <-- CAAGGACTTTGAGATCGAGAACGAGTTAAACGAATTACGAAGGAAAGCTA
EY906204       --> ..................................................
EV547746       --> ..................................................
EW735262       --> ..................................................
EX890047       --> ..................................................
EX756564       --> ..................................................
EX903663       --> ..................................................
FD988167       --> ..................................................
FD550578       --> ..................................................
FD557779       --> ..................................................
EV524970       --> ..................................................
FD550524       --> ..................................................
FD970786       --> ..................................................
FD970492       --> ..................................................
EV568606       --> ..................................................
EV568744       --> ..................................................
FY435963       --> ..................................................
FY435992       --> ..................................................
FD980686       --> ..................................................
EW714248       --> ..................................................
FD543703       --> ..................................................
FY446257       --> ..................................................
EY946309       --> ..................................................
FD947857       --> CA-GGACTCGGAGATCGAGAcgag..........................
FD937826       --> CAAGGACTCGGAGATCGAGAACGAGTTAAACGAATTACGAAG-AAAGCTA
EY947502       --> CAAGGACTCTGAGATCGAGAACGAGTTAAACGAATTACGAAGGAAAGCTA
FD579571       --> CAAGGACTCTGAGATCGAGAACGAGTTAAACGAATTACGAAGGAAAGCTA
FD965292       --> CAAGGACTCCGAGATCGAGAACGAGTTAAACGAATTACGAAGGAAAGCTA

               1099   -   1149
UN23330        --> ACGAGTTTTAGGCAACTGCTGTTTCTGAGTTGTGTTACTGGTTAACTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444423       <-- ACGAGTTTTAGGCAACTGCTGTTTCTGAGTTGTGTTACTGGTTAACTTCT
EW719006       <-- ACGAGTTTTAGGCAACTGCTGTTTCTGAGTTGTGTTACTGGTTAACTTCT
EV543563       <-- ACGAGTTTTAGGCAACTGCTGTTTTTGAGTTGTGTTACTGGTTAACTTCT
EV573290       <-- ACGAGTTTTAGGCAACTGCTGTTTCTGAGTTGTGTTACTGGTTAACTTCT
FD967065       <-- ACGAGTTTTAGGCAACTGCTGTTTCTGAGTTGTGTTACTGATTAACTTCT
EX760348       <-- ACGAGTTTTAGGCAACTGCTGTTTCTGAGTTGTGTTACTGGTTAACTTCT
EX907681       <-- ACGAGTTTTAGGCAACTGCTGTTTCTGAGTTGTGTTACTGGTTAACTTCT
EW738248       <-- ACGAGTTTTAGGCAACTGCTGTTTCTGAGTTGTGTTACTGGTTAACTTCT
FD984099       <-- ACGAGTTTTAGGCAACTGCTGTTTCTGAGTTGTGTTACTGGTTAACTTCT
EV573398       <-- ACGAGTTTTAGGCAACTGCTGTTTCTGAGTTGTGTTACTGGTTAACTTCT
FD576103       <-- ACGAGTTTTAGGCAACTGCTGTTTTTGAGTTGTGTTACTGGTTAACTTCT
EV529831       <-- ACGAGTTTTAGGCAACTGCTGTTTCTGAGTTGTGTTACTGGTTAACTTCT
EY942429       <-- ACGAGTTTTAGGCAACTGCTGTTTCTGAGTTGTGCTACTGGTTAACTTCT
FD943729       <-- ACGAGTTTTAGGCAACTGCTGTTTCTGAGTTGTGTTACTGGTTAACTTCT
FD976543       <-- ACGAGTTTTAGGCAACTGCTGTTTCTGAGTTGTGTTACTGGTTAACTTCT
FD539481       <-- ACGAGTTTTAGGCAACTGCTGTTTCTGAGTTGTGTTACTGGTTAACTTCT
EX752694       <-- ACGAGTTTTAGGCAACTGCTGTTTTTGAGTTGTGTTACTGGTTAACTTCT
FD538130       <-- ACGAGTTTTAGGCAACTGCTGTTTTTGAGTTGTGTTACTGGTTAACTTCT
FD584384       <-- ACGAGTTTTAGGCAACTGCTGTTTTTGAGTTGTGTTACTGGTTAACTTCT
EY943388       <-- ACGAGTTTTAGGCAACTGCTGTTTTTGAGTTGTGTTACTGGTTAACTTCT
FD961072       <-- ACGAGTTTTAGGCAACTGCTGTTTCTGAGTTGTGTTACTGGTTAACTTCT
FD583533       <-- ACGAGTTTTAGGCAACTGCTGTTTTTGAGTTGTGTTACTGGTTAACTTCT
EY906204       --> ..................................................
EV547746       --> ..................................................
EW735262       --> ..................................................
EX890047       --> ..................................................
EX756564       --> ..................................................
EX903663       --> ..................................................
FD988167       --> ..................................................
FD550578       --> ..................................................
FD557779       --> ..................................................
EV524970       --> ..................................................
FD550524       --> ..................................................
FD970786       --> ..................................................
FD970492       --> ..................................................
EV568606       --> ..................................................
EV568744       --> ..................................................
FY435963       --> ..................................................
FY435992       --> ..................................................
FD980686       --> ..................................................
EW714248       --> ..................................................
FD543703       --> ..................................................
FY446257       --> ..................................................
EY946309       --> ..................................................
FD947857       --> ..................................................
FD937826       --> ACGAGTTTTAG-CAACTGCTGTTTCTGAGT-GTG-TACTGGTTAACTTCT
EY947502       --> ACGAGTTTTAGGCAACTGCTGTTTCTGAGTTGTGTTACTGGTTAACTTCT
FD579571       --> ACGAGTTTTAGGCAACTGCTGTTTCTGAGTTGTGTTACTGGTTAACTTCT
FD965292       --> ACGAGTTTTAGGCAACTGCTGTTTCTGAGTTGTGTTACTGGTTAACTTCT

               1149   -   1199
UN23330        --> TTTATGTAAACTATTTTTGTTTCTTGAAGAAAAATAACACCAAAAGCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444423       <-- TTTATGTAAACTATTTTTGTTTCTTGAAGAAAAATAACACCAAAAGCATG
EW719006       <-- TTTATGTAA-CTATTTTTGTTTCTTGAAGAAAAATAACACCAAAAGCATG
EV543563       <-- TTTATGTAAACTATTTTTGTTTCTTGAAGAAAAATAACACCAAAAGCATG
EV573290       <-- TTTATGTAAACTATTTTTGTTTCTTGAAGAAAGATAACACC.........
FD967065       <-- TTTATGTAAACTATTTTTGTTTCTTGAAGAAAAATAACACCAAAAGCATG
EX760348       <-- TTTATGTAAACTATTTTTGTTTCTTGAAGAAAAATAACACCAAAAGCATG
EX907681       <-- TTTATGTAAACTATTTTTGTTTCTTGAAGAAAAATAACCCCAAAAGCATG
EW738248       <-- TTTATGTAAACTATTTTTGTTTCTTGAAGAAAAATAACACCAAAAGCATG
FD984099       <-- TTTATGTAAACTATTTTTGTTTCTTGA--AAAAATAACACCAAAAGCATG
EV573398       <-- TTTATGTAAACTATTTTTGTTTCTTGAAGAAAAATAACACCAAAAGCATG
FD576103       <-- TTTATGTAAACTATTTTTGTTTCTTGAAGAAAAATAACACCAAAAGCATG
EV529831       <-- TTTATGTAAACTATTTTTGTTTCTTGAAG.....................
EY942429       <-- TTTATGTAAACTATTTTTGTTTCTTGAAGAAAAATAACACCAAAAGCATG
FD943729       <-- TTTATGTAAACTATTTTTGTTTCTTG........................
FD976543       <-- TTTATGTAAACTATTTTTGTTTCTTGAAGAAAAATAACACCAAAAGCATG
FD539481       <-- TTTATGTAAACTATTTTTGTTTCTTGAAGAAAAATAACACCAAAAGCATG
EX752694       <-- TTTATGTAAACTATTTTTGTTTCTTGAAGAAAAATAACCCCAAAAGCATG
FD538130       <-- TTTATGTAAACTATTTTTGTTTCTTGAAGAAAAATAACACCAAAAGCATG
FD584384       <-- TTTATGTAAACTATTTTTGTTTCTTGAAGAAAAATAACACCAAAAGCATG
EY943388       <-- TTTATGTAAACTATTTTTGTTTCTTGAAGAAAAATAACACCAAAAGCATG
FD961072       <-- TTTATGTAAACTATTTTTGTTTCTTGAAGAAAAATAACACCAAAAGCATG
FD583533       <-- TTTATGTAAACTATTTTTGTTTCTTGAAGAAAAATAACACCAAAAGCATG
EY906204       --> ..................................................
EV547746       --> ..................................................
EW735262       --> ..................................................
EX890047       --> ..................................................
EX756564       --> ..................................................
EX903663       --> ..................................................
FD988167       --> ..................................................
FD550578       --> ..................................................
FD557779       --> ..................................................
EV524970       --> ..................................................
FD550524       --> ..................................................
FD970786       --> ..................................................
FD970492       --> ..................................................
EV568606       --> ..................................................
EV568744       --> ..................................................
FY435963       --> ..................................................
FY435992       --> ..................................................
FD980686       --> ..................................................
EW714248       --> ..................................................
FD543703       --> ..................................................
FY446257       --> ..................................................
EY946309       --> ..................................................
FD947857       --> ..................................................
FD937826       --> TT-ATGTAA-CTATTTT-GTTTC...........................
EY947502       --> TTTATGTAAACTATTTTTGTTTCTTGAAGAAAAATAACACCAAAAGCATG
FD579571       --> TTTATGTAAACTATTTTTGTTTCTTGAAGAAAAATAACACCAAAAGCATG
FD965292       --> TTTATGTAAACTATTTTTGTTTCTTGAAGAAAAATAACACCAAAAGCATG

               1199   -   1249
UN23330        --> TGTTTAAATAAGTA-AATATCCAGCTACCTAATCTTCATTTATGACTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444423       <-- TGTT-AAATAAGTAGAATATCCAGCTACCTAATCTTCATTTATGAC....
EW719006       <-- TGTTTAAATAAGTA-AATATCCAGCTACCTAATCTTCATTTATGACTTGG
EV543563       <-- TGTTTAAATAAGTA-AATATCCAGCTACCTAATCTTCATT..........
EV573290       <-- ..................................................
FD967065       <-- TGTTTAAATAAGc.....................................
EX760348       <-- TGTTTAAATAAGTA-AATATCCAGCTACCTAATCTTCATTTATGACTTGG
EX907681       <-- TGTTT.............................................
EW738248       <-- TGTTTAAATAAGTA-AATATCCAGCTACat....................
FD984099       <-- TGTTTAAATAAGTA-AATATCCAGCTg.......................
EV573398       <-- TGTTTAAATAAGTA-AATATCCAGCTACCTAATCTTCATTTATGACTTGG
FD576103       <-- TGTTTAAATAAGTA-AATATCCAGCTACCTAATCTTCATTTATGACTTGG
EV529831       <-- ..................................................
EY942429       <-- TGTTTAAATAAGT.....................................
FD943729       <-- ..................................................
FD976543       <-- TGTTTAAATAAGTA-AATATCCAGCTACCTAATCTTCATTTATGACTTGG
FD539481       <-- TGTTTAAATAAGTA-AATATCCAGCTACCTAATCTT..............
EX752694       <-- TGTTTAAATAAGTA-AATATCCAGCTACCTAATCTTCATTTATGACTTGG
FD538130       <-- TGTTTAAATAAGTA-AATATCCAGCTACCTAATCTcc.............
FD584384       <-- TGTTTAAATAGGTA-AATATCCAGCTACCTAATCTTCATTTATGGCTTGG
EY943388       <-- TGTTTAAATAAGTA-AATATCCAGCTACCTAATCTTCATTTATGACTTGG
FD961072       <-- TGTTTAAATAAGTA-AATATCCAGCTACCT....................
FD583533       <-- TGTTTAAATAAGTA-AATATCCAGCTACCTAATCTTCATTTATGACTTGG
EY906204       --> ..................................................
EV547746       --> ..................................................
EW735262       --> ..................................................
EX890047       --> ..................................................
EX756564       --> ..................................................
EX903663       --> ..................................................
FD988167       --> ..................................................
FD550578       --> ..................................................
FD557779       --> ..................................................
EV524970       --> ..................................................
FD550524       --> ..................................................
FD970786       --> ..................................................
FD970492       --> ..................................................
EV568606       --> ..................................................
EV568744       --> ..................................................
FY435963       --> ..................................................
FY435992       --> ..................................................
FD980686       --> ..................................................
EW714248       --> ..................................................
FD543703       --> ..................................................
FY446257       --> ..................................................
EY946309       --> ..................................................
FD947857       --> ..................................................
FD937826       --> ..................................................
EY947502       --> TGTTTAAATAAGTA-AATATCCAGCTACCTAATCTTCATTTATGACTTGG
FD579571       --> TGTTTAAATAAGTA-AATATCCAGCTACCTAATCTTCATTTATGACTTGG
FD965292       --> TGTTTAAATAAGTA-AATATCCAGCTACCTAATCTT..............

               1249   -   1299
UN23330        --> TTAAATTTGGTATTTTCATCTGAATC..................
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444423       <-- ............................................
EW719006       <-- TTAAATTTGGTATTTTCc..........................
EV543563       <-- ............................................
EV573290       <-- ............................................
FD967065       <-- ............................................
EX760348       <-- TTAAATTTGGc.................................
EX907681       <-- ............................................
EW738248       <-- ............................................
FD984099       <-- ............................................
EV573398       <-- TTAAATTTGGTATTTTCATCTGAATCactggttttgaaaggatc
FD576103       <-- TT..........................................
EV529831       <-- ............................................
EY942429       <-- ............................................
FD943729       <-- ............................................
FD976543       <-- TTAAATTTGGTATGTTCATCcg......................
FD539481       <-- ............................................
EX752694       <-- TTAAATTTGGTATTTT............................
FD538130       <-- ............................................
FD584384       <-- TTAAATTTGGT.................................
EY943388       <-- TT..........................................
FD961072       <-- ............................................
FD583533       <-- TT..........................................
EY906204       --> ............................................
EV547746       --> ............................................
EW735262       --> ............................................
EX890047       --> ............................................
EX756564       --> ............................................
EX903663       --> ............................................
FD988167       --> ............................................
FD550578       --> ............................................
FD557779       --> ............................................
EV524970       --> ............................................
FD550524       --> ............................................
FD970786       --> ............................................
FD970492       --> ............................................
EV568606       --> ............................................
EV568744       --> ............................................
FY435963       --> ............................................
FY435992       --> ............................................
FD980686       --> ............................................
EW714248       --> ............................................
FD543703       --> ............................................
FY446257       --> ............................................
EY946309       --> ............................................
FD947857       --> ............................................
FD937826       --> ............................................
EY947502       --> TT..........................................
FD579571       --> TT..........................................
FD965292       --> ............................................