RadishBase

| | | |
Alignment for radish unigene UN23335

               -2     -     48
UN23335        --> ...GGGCTCATTCATTCTCACAATCCAATCTCAA-TTCCA-TATCTCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533116       <-- ...GGGCTCATTCATTCTCACAATCCAATCTCAAATTCCA-TCTCTCTCT  Raphanus raphanistrum subsp. maritimus
EX908702       <-- ...GGGCTCATTCATTCTCACAATCCAATCTCAA-TTCCAATATCTCTCT  Raphanus sativus cv Rat-Tail Radish #3870
EY917457       <-- ...GGGCTCATTCATTCTCACAATCCAATCTCAA-TTCCA--ATCTCTCT  Raphanus raphanistrum subsp. landra
FD976166       <-- ...GGGCTCATTCATTCTCACAATCCAATCTCAA-TTCCAATATCTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572154       <-- ...........ggATTCTCACAATCCAATCTCAA-TTCCA--ATCTCTCT  Raphanus raphanistrum subsp. landra
EV572512       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX776911       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY428672       <-- ..................................................  Raphanus sativus cv GSK3-1
EV529354       --> ...GGGCTCATTCATTCTCACAATCCAATCTCAAATTCCA-TCTCTCTCT  Raphanus raphanistrum subsp. maritimus
EV567605       --> ...GGGCTCATTCATTCTCACAATCCAATCTCAA-TTCCA--ATCTCTCT  Raphanus raphanistrum subsp. landra
EX904888       --> ...GGGCTCATTCATTCTCACAATCCAATCTCAA-TTCCAATATCTCTCT  Raphanus sativus cv Rat-Tail Radish #3870
EY921272       --> ...GGGCTCATTCATTCTCACAATCCAATCTCAA-TTCCA--ATCTCTCT  Raphanus raphanistrum subsp. landra
FD965418       --> ...GGGCTCATTCATTCTCACAATCCAATCTCAA-TTCCAATATCTCTCT  Raphanus raphanistrum subsp. maritimus
FD980250       --> ...GGGCTCATTCATTCTCACAATCCAATCTCAA-TTCCAATATCTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748917       --> gggttGCTCATTCATTCTCACAATCCAATCTCAA-TTCCAATATCTCTCT  Raphanus raphanistrum subsp. maritimus
EX773065       --> .......ggATTCATTCTCACAATCCAATCTCAA-TTCCA--ATCTCTCT  Raphanus raphanistrum subsp. landra
EV567165       --> ...........ggATTCTCACAATCCAATCTCAA-TTCCA--ATCTCTCT  Raphanus raphanistrum subsp. landra
FY448558       --> ..................................................  Raphanus sativus cv GSK3-1
FD540125       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525264       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               48     -     98
UN23335        --> CTCTCACAACATGTCTGACGAAGAGCACCACTTCGAGTCCTCCGACGCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533116       <-- CTCTCTCAACATGTCTGACGAAGAGCACCACTTCGAGTCCTCCGACGCCG
EX908702       <-- CTCTCACAACATGTCTGACGAAGAGCACCACTTCGAGTCCTCCGACGCCG
EY917457       <-- CTCTCACAACATGTCTGACGAAGAGCACCACTTCGAGTCCTCCGACGCCG
FD976166       <-- CTCTCACAACATGTCTGACGAAGAGCACCACTTCGAGTCCTCCGACGCCG
EV572154       <-- C-CCCACAACATGTCTGACGAAGAGCACCACTTCGAGTCCTCCGACGCCG
EV572512       <-- ..............................................GCCG
EX776911       <-- ..................................................
FY428672       <-- ..................................................
EV529354       --> CTCTCTCAACATGTCTGACGAAGAGCACCACTTCGAGTCCTCCGACGCCG
EV567605       --> CTCTCACAACATGTCTGACGAAGAGCACCACTTCGAGTCCTCCGACGCCG
EX904888       --> CTCTCACAACATGTCTGACGAAGAGCACCACTTCGAGTCCTCCGACGCCG
EY921272       --> CTCTCACAACATGTCTGACGAAGAGCACCACTTCGAGTCCTCCGACGCCG
FD965418       --> CTCTCACAACATGTCTGACGAAGAGCACCACTTCGAGTCCTCCGACGCCG
FD980250       --> CTCTCACAACATGTCTGACGAAGAGCACCACTTCGAGTCCTCCGACGCCG
EX748917       --> CTCTCACAACATGTCTGTCGAAGAGCACCACTTCGAGTCCTCCGACGCCG
EX773065       --> CTCTCACAACATGTCTGACGAAGAGCACCACTTCGAGTCCTCCGACGCCG
EV567165       --> C-CCCACAACATGTCTGACGAAGAGCACCACTTCGAGTCCTCCGACGCCG
FY448558       --> ..........ATGTCTGACGAAGAGCACCACTTCGAGTCCTCCGACGCCG
FD540125       --> ................................................CG
EV525264       --> ..................................................

               98     -    148
UN23335        --> GAGCTTCCAAGACCTACCCTCAGCAGGCTGGTAACATCCGTAAAGGTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533116       <-- GAGCTTCCAAGACCTACCCTCAGCAGGCTGGTAACATCCGTAAAGGTGGT
EX908702       <-- GAGCTTCCAAGACCTACCCTCAGCAGGCTGGTAACATCCGTAAAGGTGGT
EY917457       <-- GAGCTTCCAAGACCTACCCTCAGCAGGCTGGTAACATCCGTAAAGGTGGT
FD976166       <-- GAGCTTCCAAGACCTACCCTCAGCAGGCTGGTAACATCCGTAAAGGTGGT
EV572154       <-- GAGCTTCCAAGACCTACCCTCAGCAGGCTGGTAACATCCGTAAAGGTGGT
EV572512       <-- GAGCTTCCAAGACCTACCCTCAGCAGGCTGGTAACATCCGTAAAGGTGGT
EX776911       <-- ..............................GTAACATCCGTAAAGGTGGT
FY428672       <-- ..................................................
EV529354       --> GAGCTTCCAAGACCTACCCTCAGCAGGCTGGTAACATCCGTAAAGGTGGT
EV567605       --> GAGCTTCCAAGACCTACCCTCAGCAGGCTGGTAACATCCGTAAAGGTGGT
EX904888       --> GAGCTTCCAAGACCTACCCTCAGCAGGCTGGTAACATCCGTAAAGGTGGT
EY921272       --> GAGCTTCCAAGACCTACCCTCAGCAGGCTGGTAACATCCGTAAAGGTGGT
FD965418       --> GAGCTTCCAAGACCTACCCTCAGCAGGCTGGTAACATCCTTAAAGGTGGT
FD980250       --> GAGCTTCCAAGACCTACCCTCAGCAGGCTGGTAACATCCGTAAAGGTGGT
EX748917       --> GAGCTTCCAAGACCTACCCTCAGCAGGCTGGTAACATCCGTAAAGGTGGT
EX773065       --> GAGCTTCCAAGACCTACCCTCAGCAGGCTGGTAACATCCGTAAAGGTGGT
EV567165       --> GAGCTTCCAAGACCTACCCTCAGCAGGCTGGTAACATCCGTAAAGGTGGT
FY448558       --> GAGCTTCCAAGACCTACCCTCAGCAGGCTGGTAACATCCGTAAAGGTGGT
FD540125       --> GAGCTTCCAAGACCTACCCTCAGCAGGCTGGTAACATCCGTAAAGGTGGT
EV525264       --> ..................................................

               148    -    198
UN23335        --> CACATCGTCATCAAGGGCCGTCCCTGCAAGGTTGTTGAGGTTTCGACTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533116       <-- CACATCGTCATCAAGGGCCGTCCCTGCAAGGTTGTTGAGGTTTCGACTTC
EX908702       <-- CACATCGTCATCAAGGGCCGTCCCTGCAAGGTTGTTGAGGTTTCGACTTC
EY917457       <-- CACATCGTCATCAAGGGCCGTCCCTGCAAGGTTGTTGAGGTTTCGACTTC
FD976166       <-- CACATCGTCATCAAGGGCCGTCCCTGCAAGGTTGTTGAGGTTTCGACTTC
EV572154       <-- CACATCGTCATCAAGGGCCGTCCCTGCAAGGTTGTTGAGGTTTCGACTTC
EV572512       <-- CACATCGTCATCAAGGGCCGTCCCTGCAAGGTTGTTGAGGTTTCGACTTC
EX776911       <-- CACATCGTCATCAAGGGCCGTCCCTGCAAGGTTGTTGAGGTTTCGACTTC
FY428672       <-- ..................................................
EV529354       --> CACATCGTCATCAAGGGCCGTCCCTGCAAGGTTGTTGAGGTTTCGACTTC
EV567605       --> CACATCGTCATCAAGGGCCGTCCCTGCAAGGTTGTTGAGGTTTCGACTTC
EX904888       --> CACATCGTCATCAAGGGCCGTCCCTGCAAGGTTGTTGAGGTTTCGACTTC
EY921272       --> CACATCGTCATCAAGGGCCGTCCCTGCAAGGTTGTTGAGGTTTCGACTTC
FD965418       --> CACATCGTCATCAAGGGCCGTCCCTGCAAGGTTGTTGAGGTTTCGACTTC
FD980250       --> CACATCGTCATCAAGGGCCGTCCCTGCAAGGTTGTTGAGGTTTCGACTTC
EX748917       --> CACATCGTCATCAAGGGCCGTCCCTGCAAGGTTGTTGAGGTTTCGACTTC
EX773065       --> CACATCGTCATCAAGGGCCGTCCCTGCAAGGTTGTTGAGGTTTCGACTTC
EV567165       --> CACATCGTCATCAAGGGCCGTCCCTGCAAGGTTGTTGAGGTTTCGACTTC
FY448558       --> CACATCGTCATCAAGGGCCGTCCCTGCAAGGTTGTTGAGGTTTCGACTTC
FD540125       --> CACATCGTCATCAAGGGCCGTCCCTGCAAGGTTGTTGAGGTTTCCACTTC
EV525264       --> ..................................................

               198    -    248
UN23335        --> GAAGACTGGCAAGCACGGTCACGCGAAGTGTCACTTCGTTGCTATTGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533116       <-- CAAGACTGGCAAGCACGGTCACGCGAAGTGTCACTTCGTTGCTATTGATA
EX908702       <-- GAAGACTGGCAAGCACGGTCACGCGAAGTGTCACTTCGTTGCTATTGATA
EY917457       <-- GAAGACTGGCAAGCACGGTCACGCGAAGTGTCACTTCGTTGCTATTGATA
FD976166       <-- GAAGACTGGCAAGCACGGTCACGCGAAGTGTCACTTCGTTGCTATTGATA
EV572154       <-- GAAGACTGGCAAGCACGGTCACGCGAAGTGTCACTTCGTTGCTATTGATA
EV572512       <-- GAAGACTGGCAAGTACGGTCACGCGAAGTGTCACTTCGTTGCTATTGATG
EX776911       <-- GAAGACTGGCAAGCACGGTCACGCGAAGTGTCACTTCGTTGCTATTGATA
FY428672       <-- ..................................................
EV529354       --> CAAGACTGGCAAGCACGGTCACGCGAAGTGTCACTTCGTTGCTATTGATA
EV567605       --> GAAGACTGGCAAGTACGGTCACGCGAAGTGTCACTTCGTTGCTATTGATG
EX904888       --> GAAGACTGGCAAGCACGGTCACGCGAAGTGTCACTTCGTTGCTATTGATA
EY921272       --> GAAGACTGGCAAGCACGGTCACGCGAAGTGTCACTTCGTTGCTATTGATA
FD965418       --> GAAGACTGGCAAGCACGGTCACGCGAAGTGTCACTTCGTTGCTATTGATA
FD980250       --> GAAGACTGGCAAGCACGGTCACGCGAAGTGTCACTTCGTTGCTATTGATA
EX748917       --> GAAGACTGGCAAGCACGGTCACGCGAAGTGTCACTTCGTTGCTATTGATA
EX773065       --> GAAGACTGGCAAGCACGGTCACGCGAAGTGTCACTTCGTTGCTATTGATA
EV567165       --> GAAGACTGGCAAGCACGGTCACGCGAAGTGTCACTTCGTTGCTATTGATA
FY448558       --> GAAGACTGGCAAGCACGGTCACGCGAAGTGTCACTTCGTTGCTATTGATA
FD540125       --> CAAGACTGGGAAGCACGGTCACGCGAAGTGTCACTTCCTTGCTATTGATA
EV525264       --> ..............gCGGTCACGCGAAGTGTCACTTCGTTGCTATTGATA

               248    -    298
UN23335        --> TCTTCACTGCTAAGAAGCTCGAGGATATTGTTCCCTCTTCCCACAATTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533116       <-- TCTTCACTGCTAAGAAGCTCGAGGATATCGTTCCCTCTTCCTACAATTGT
EX908702       <-- TCTTCACTGCTAAGAAGCTCGAGGATATTGTTCCCTCTTCCCACAATTGT
EY917457       <-- TCTTCACTGCTAAGAAGCTCGAGGATATTGTTCCCTCTTCCCACAATTGT
FD976166       <-- TCTTCACTGCTAAGAAGCTCGAGGATATTGTTCCCTCTTCCCACAATTGT
EV572154       <-- TCTTCACTGCTAAGAAGCTCGAGGATATTGTTCCCTCTTCCCACAATTGT
EV572512       <-- TCTTCACTGCTAAGAAGCTCGAGGATATTGTTCCCTCTTCCCACAATTGT
EX776911       <-- TCTTCACTGCTAAGAAGCTCGAGGATATTGTTCCCTCTTCCCACAATTGT
FY428672       <-- ........................................CCACAATTGT
EV529354       --> TCTTCACTGCTAAGAAGCTCGAGGATATCGTTCCCTCTTCCTACAATTGT
EV567605       --> TCTTCACTGCTAAGAAGCTCGAGGATATTGTTCCCTCTTCCCACAATTGT
EX904888       --> TCTTCACTGCTAAGAAGCTCGAGGATATTGTTCCCTCTTCCCACAATTGT
EY921272       --> TCTTCACTGCTAAGAAGCTCGAGGATATTGTTCCCTCTTCCCACAATTGT
FD965418       --> TCTTCACTGCTAAGAAGCTCGAGGATATTGTTCCCTCTTCCCACAATTGT
FD980250       --> TCTTCACTGCTAAGAAGCTCGAGGATATTGTTCCCTCTTCCCACAATTGT
EX748917       --> TCTTCACTGCTAAGAAGCTCGAGGATATTGTTCCCTCTTCCCACAATTGT
EX773065       --> TCTTCACTGCTAAGAAGCTCGAGGATATTGTTCCCTCTTCCCACAATTGT
EV567165       --> TCTTCACTGCTAAGAAGCTCGAGGATATTGTTCCCTCTTCCCACAATTGT
FY448558       --> TCTTCACTGCTAAGAAGCTCGAGGATATTGTTCCCTCTTCCCACAATTGT
FD540125       --> TCTTCACTGCTAAGAAGCTCGAGGATATCGTTCCCTCTTCCCACAATTGT
EV525264       --> TCTTCACTGCTAAGAAGCTCGAGGATATCGTTCCCTCTTCCCACAATTGT

               298    -    348
UN23335        --> GATGTTCCTCATGTGAACCGTATTGATTACCAGTTGATTGATATCTCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533116       <-- GATGTTCCTCATGTGAACCGTATTGATTACCAGTTGATTGATATCTCTGA  Raphanus raphanistrum subsp. maritimus
EX908702       <-- GATGTTCCTCATGTGAACCGTATTGATTACCAGTTGATTGATATCTCTGA  Raphanus sativus cv Rat-Tail Radish #3870
EY917457       <-- GATGTTCCTCATGTGAACCGTATTGATTACCAGCTGATTGATATCTCTGA  Raphanus raphanistrum subsp. landra
FD976166       <-- GATGTTCCTCATGTGAACCGTATTGATTACCAGTTGATTGATATCTCTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572154       <-- GATGTTCCTCATGTGAACCGTATTGATTACCAGCTGATTGATATCTTTGA  Raphanus raphanistrum subsp. landra
EV572512       <-- GATGTTCCTCATGTGAACCGTATTGATTACCAGCTGATTGATATCTCTGA  Raphanus raphanistrum subsp. landra
EX776911       <-- GATGTTCCTCATGTGAACCGTATTGATTACCAGCTGATTGATATCTCTGA  Raphanus raphanistrum subsp. landra
FY428672       <-- GATGTTCCTCATGTGAACCGTATTGATTACCAGTTGATTGATATCTCTGA  Raphanus sativus cv GSK3-1
EV529354       --> GATGTTCCTCATGTGAACCGTATTGATTACCAGTTGATTGATATCTCTGA  Raphanus raphanistrum subsp. maritimus
EV567605       --> GATGTTCCTCATGTGAACCGTATTGATTACCAGCTGATTGATATCTCTGA  Raphanus raphanistrum subsp. landra
EX904888       --> GATGTTCCTCATGTGAACCGTATTGATTACCAGTTGATTGATATCTCTGA  Raphanus sativus cv Rat-Tail Radish #3870
EY921272       --> GATGTTCCTCATGTGAACCGTATTGATTACCAGCTGATTGATATCTCTGA  Raphanus raphanistrum subsp. landra
FD965418       --> GATGTTCCTCATGTGAACCGTATTGATTACCAGTTGATTGATATCTCTGA  Raphanus raphanistrum subsp. maritimus
FD980250       --> GATGTTCCTCATGTGAACCGTATTGATTACCAGTTGATTGATATCTCTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748917       --> GATGTTCCTCATGTGAACCGTATTGATTACCAGTTGATTGATATCTCTGA  Raphanus raphanistrum subsp. maritimus
EX773065       --> GATGTTCCTCATGTGAACCGTATTGATTACCAGCTGATTGATATCTCTGA  Raphanus raphanistrum subsp. landra
EV567165       --> GATGTTCCTCATGTGAACCGTATTGATTACCAGCTGATTGATATCTCTGA  Raphanus raphanistrum subsp. landra
FY448558       --> GATGTTCCTCATGTGAACCGTATTGATTACCAGTTGATTGATATCTCTGA  Raphanus sativus cv GSK3-1
FD540125       --> GATGTTCCTCATGTGAACCGTATTGATTACCACCTGATTGATATCTCTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525264       --> GATGTTCCTCATGTGAACCGTATTGATTACCAGTTGATTGATATCTCTGA  Raphanus raphanistrum subsp. maritimus

               348    -    398
UN23335        --> GGATGGCTTTGTTAGCCTTTTGACCGACAGTGGTGGCACTAAGGACGACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533116       <-- GGATGGCTTTGTTAGCCTTTTGACCGACAGTGGTGGCACTAAGGACGACC  Raphanus raphanistrum subsp. maritimus
EX908702       <-- GGATGGCTTTGTTAGCCTTTTGACCGACAGTGGTGGCACTAAGGACGACC  Raphanus sativus cv Rat-Tail Radish #3870
EY917457       <-- GGATGGCTTTGTTAGCCTTTTGACCGACAGTGGTGGCACCAAGTACGACC  Raphanus raphanistrum subsp. landra
FD976166       <-- GGATGGCTTTGTTAGCCTTTTGACCGTCAGTGGTGGCACTAAGGACGACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572154       <-- GGATGGCTTTGTTAGCCTTTTGACCGACAGTGGTGGCACCAAGGACGACC  Raphanus raphanistrum subsp. landra
EV572512       <-- GGATGGCTTTGTTAGCCTTTTGACCGACAGTGGTGGCACCAAGGACGACC  Raphanus raphanistrum subsp. landra
EX776911       <-- GGATGGCTTTGTTAGCCTTTTGACCGACAGTGGTGGCACCAAGGACGACC  Raphanus raphanistrum subsp. landra
FY428672       <-- GGATGGCTTTGTTAGCCTTTTGACCGACAGTGGTGGCACTAAGGACGACC  Raphanus sativus cv GSK3-1
EV529354       --> GGATGGCTTTGTTAGCCTTTTGACCGACAGTGGTGGCACTAAGGACGACC  Raphanus raphanistrum subsp. maritimus
EV567605       --> GGATGGCTTTGTTAGCCTTTTGACCGACAGTGGTGGCACCAAGGACGACC  Raphanus raphanistrum subsp. landra
EX904888       --> GGATGGCTTTGTTAGCCTTTTGACCGACAGTGGTGGCACTAAGGACGACC  Raphanus sativus cv Rat-Tail Radish #3870
EY921272       --> GGATGGCTTTGTTAGCCTTTTGACCGACAGTGGTGGCACCAAGTACGACC  Raphanus raphanistrum subsp. landra
FD965418       --> GGATGGCTTTGTTAGCCTTTTGACCGACAGTGGTGGCACTAAGGACGACC  Raphanus raphanistrum subsp. maritimus
FD980250       --> GGATGGCTTTGTTAGCCTTTTGACCGTCAGTGGTGGCACTAAGGACGACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748917       --> GGATGGCTTTGTTAGCCTTTTGACCGACAGTGGTGGCACTAAGGACGACC  Raphanus raphanistrum subsp. maritimus
EX773065       --> GGATGGCTTTGTTAGCCTTTTGACCGACAGTGGTGGCACCAAGGACGACC  Raphanus raphanistrum subsp. landra
EV567165       --> GGATGGCTTTGTTAGCCTTTTGACCGACAGTGGTGGCACCAAGGACGACC  Raphanus raphanistrum subsp. landra
FY448558       --> GGATGGCTTTGTTAGCCTTTTGACCGACAGTGGTGGCACTAAGGACGACC  Raphanus sativus cv GSK3-1
FD540125       --> GGATGGCTTTGTTAGCCTTTTGACCGACAGTGGTGG..............  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525264       --> GGATGGCTTTGTTAGCCTTTTGACCGACAGTGGTGGCACTAAGGACGACC  Raphanus raphanistrum subsp. maritimus

               398    -    448
UN23335        --> TCAAGCTTCCCACCGATGATAATCTCAGCGCTCTGATGAAGAGTGGATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533116       <-- TCAAGCTTCCCACCGATGATAATCTCAGCGCTCTGATGAAATGTGGATTC  Raphanus raphanistrum subsp. maritimus
EX908702       <-- TCAAGCTTCCCACCGATGATAATCTGAGCGCTCTGATGAAGAGTGGATTC  Raphanus sativus cv Rat-Tail Radish #3870
EY917457       <-- TCAAGCTTCCCACCGATGATAATCTCAGCGCTCTGATGAAGAGTGGATTC  Raphanus raphanistrum subsp. landra
FD976166       <-- TCAAGCTTCCCACCGATGATAATCTGAGCGCTCTGATGAAGAGTGGATTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572154       <-- TCAAGCTTCCCACCGATGATAATCTCAGCGCTTTGATGAAGAGTGGATTC  Raphanus raphanistrum subsp. landra
EV572512       <-- TCAAGCTTCCCACCGATGATAATCTCAGCGCTCTGATGAAGAGTGGATTC  Raphanus raphanistrum subsp. landra
EX776911       <-- TCAAGCTTCCCACCGATGATAATTTCAGCGCTCTGATGAAGAGTGGATTC  Raphanus raphanistrum subsp. landra
FY428672       <-- TCAAGCTTCCCACCGATGATAATTTGAGCGCTTTGATGAAGAGTGGATTC  Raphanus sativus cv GSK3-1
EV529354       --> TCAAGCTTCCCACCGATGATAATCTCAGCGCTCTGATGAAATGTGGATTC  Raphanus raphanistrum subsp. maritimus
EV567605       --> TCAAGCTTCCCACCGATGATAATCTCAGCGCTCTGATGAAGAGTGGATTC  Raphanus raphanistrum subsp. landra
EX904888       --> TCAAGCTTCCCACCGATGATAATCTGAGCGCTCTGATGAAGAGTGGATTC  Raphanus sativus cv Rat-Tail Radish #3870
EY921272       --> TCAAGCTTCCCACCGATGATAATCTCAGCGCTCTGATGAAGAGTGGATTC  Raphanus raphanistrum subsp. landra
FD965418       --> TCAAGCTTCCCACCGATGATAATCTGAGCGCTCTGATGAAGAGTGGATTC  Raphanus raphanistrum subsp. maritimus
FD980250       --> TCAAGCTTCCCACCGATGATAATCTGAGCGCTCTGATGAAGAGTGGATTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748917       --> TCAAGCTTCCCACCGATGATAATCTGAGCGCTCTGATGAAGAGTGGATTC  Raphanus raphanistrum subsp. maritimus
EX773065       --> TCAAGCTTCCCACCGATGATAATCTCAGCGCTCTGATGAAGAGTGGATTC  Raphanus raphanistrum subsp. landra
EV567165       --> TCAAGCTTCCCACCGATGATAATCTCAGCGCTCTGATGAAGAGTGGATTC  Raphanus raphanistrum subsp. landra
FY448558       --> TCAAGCTTCCCACCGATGATAATCTGAGCGCTCTGATGAAGAGTGGATTC  Raphanus sativus cv GSK3-1
FD540125       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525264       --> TCAAGCTTCCCACCGATGATAATCTCAGCGCTCTGATGAAGAGTGGATTC  Raphanus raphanistrum subsp. maritimus

               448    -    498
UN23335        --> GAGGAGGGAAAGGATGTGGTTGTGTCTGTCATGTCTTCGATGGGAGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533116       <-- GAGGAGGGAAAGGATGTGGTGGTGTCTGTCATGTCTTCGATGGGAGAGGA
EX908702       <-- GAGGAGGGAAAGGATGTGGTTGTGTCTGTCATGTCTTCGATGGGAGAGGA
EY917457       <-- GAGGAGGGAAAGGATGTGGTTGTGTCTGTCATGTCTTCGATGGGAGAGGA
FD976166       <-- GAGGAGGGAAAGGATGTGGTTGTGTCTGTCATGTCTTCGATTGGAGAGGA
EV572154       <-- GAGGAGGGAAAGGATGTGGTTGTGTCTGTCATGTTTTCGATGGGAGAGGA
EV572512       <-- GAGGAGGGAAAGGATGTGGTTGTGTCTGTCATGTCTTCGATGGGAGAGGA
EX776911       <-- GAGGATGGAAAGGATGTGGTTGTGTCTGTCATGTCTTCGATGGGAGAGGA
FY428672       <-- GAGGAGGGAAAGGATGTGGTTGTGTCTGTCATGTTTTCGATGGGAGAGGA
EV529354       --> GAGGAGGGAAAGGATGTGGTGGTGTCTGTCATGTCTTCGATGGGAGAGGA
EV567605       --> GAGGAGGGAAAGGATGTGGTTGTGTCTGTCATGTCTTCGATGGGAGAGGA
EX904888       --> GAGGAGGGAAAGGATGTGGTTGTGTCTGTCATGTCTTCGATGGGAGAGGA
EY921272       --> GAGGAGGGAAAGGATGTGGTTGTGTCTGTCATGTCTTCGATGGGAGAGGA
FD965418       --> GAGGAGGGAAAGGATGTGGTTGTGTCTGTCATGTCTTCGATGGGAGAGGA
FD980250       --> GAGGAGGGAAAGGATGTGGTTGTGTCTGTCATGTCTTCGATTGGAGAGGA
EX748917       --> GAGGAGGGAAAGGATGTGGTTGTGTCTGTCATGTCTTCGATGGGAGAGGA
EX773065       --> GAGGATGGAAAGGATGTGGTTGTGTCTGTCATGTCTTCGATGGGAGAGGA
EV567165       --> GAGGAGGGAAAGGATGTGGTTGTGTCTGTCATGTCTTCGATGGGAGAGGA
FY448558       --> GAGGAGGGAAAGGATGTGGTTGTGTCTGTCATGTCTTCGATGGGAGAGGA
FD540125       --> ..................................................
EV525264       --> GAGGAGGGAAAGGATGTGGTGGTGTCTGTCATGTCTTCGATGGGAGAGGA

               498    -    548
UN23335        --> GCAGATCTGTGCCGTCAAGGAAGTTGGTGGTGGCAAGTAAAACCAACAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533116       <-- GCAGATCTGTGCCGTCAAGGAAGTTGGTGGTGGCAAGTAAAACCAACAAG
EX908702       <-- GCAGATCTGTGCCGTCAAGGAAGTTGGTGGTGGCAAGTAAAACCAACAAG
EY917457       <-- ACAGATCTGTGCCGTCAAGGAAGTTGGTGGTGGCAAGTAAAACCAACAAG
FD976166       <-- GCAGATCTGTGCCGTCAAGGAAGTTGGTGGTGGCAAGTAAAACCAACAAG
EV572154       <-- GCAGATCTGTGCCGTCAAGGAAGTTGGTGGTGGCAAGTAAAACCAACAAG
EV572512       <-- GCAGA.............................................
EX776911       <-- GCAGATCTGTGCCGTCAAGGAAGTTGGTGGTGGCAAGTAAAACCAACAAG
FY428672       <-- GCAGATTTGTGCCGTCAAGGAAGTTGGTGGTGGCAAGTAAAACCAACAAG
EV529354       --> GCAGATCTGTGCCGTCAAGGAAGTTGGTGGTGGCAAGTAAAACCAACAAG
EV567605       --> GCAGATCTGTGCCGTCAAGGAAGTTGGTGGTGACAAGTAAAACCAACAAG
EX904888       --> GCAGATCTGTGCCGTCAAGGAAGTTGGTGGTGGCAAGTAAAACCAACAAG
EY921272       --> ACAGATCTGTGCCGTCAAGGAAGTTGGTGGTGGCAAGTAAAACCAACAAG
FD965418       --> GCAGATCTGTGCCGTCAAGGAAGTTGGTGGTGGCAAGTAAAACCAACAAG
FD980250       --> GCAGATCTGTGCCGTCAAGGAAGTTGGTGGTGGCAAGTAAAACCAACAAG
EX748917       --> GCAGATCTGTGCCGTCAAGGAAGTTGGTGGTGGCAAGTAAAACCAACAAG
EX773065       --> GCAGATCTGTGCCGTCAAGGAAGTTGGTGGTGGCAAGTAAAACCAACAAG
EV567165       --> GCAGATCTGTGCCGTCAAGGAAGTTGGTGGTGGCAAGTAAAACCAACAAG
FY448558       --> GCAGATCTGTGCCGTCAAGGAAGTTGGTGGTGGCAAGTAAAACCAACAAG
FD540125       --> ..................................................
EV525264       --> GCAGATCTGTGCCGTCAAGGAAGTTGGTGGTGGCAAGTAAAACCAACAAG

               548    -    598
UN23335        --> TGTTATCATTCTCTCTTTACACAGAGGATAA-TCTTATTTACCTTACCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533116       <-- TGTTATCATTCTCTCTTTACACAGAGGATAAATCTTATTTAC--CCCAGC
EX908702       <-- TGTTATCATTCTCTCTTTACACAGAGGATAA-TCTTATTTACCTTACCCC
EY917457       <-- TGTTATCATTCTCTCTTTACACAGAGGATAA-TCTTATTTACCTTACCC-
FD976166       <-- TGTTATCACTCTCTCTTTACACAGAGGATAA-TCTTATTTACCTTACCCC
EV572154       <-- TGTTATCATTCTCTCTTTACACAGAGGATAA-TCTTATTTACCCTACCCC
EV572512       <-- ..................................................
EX776911       <-- TGTTATCATTCTCTCTTTACACAGAGGATAA-TCTTATTTACCTTACCCC
FY428672       <-- TGTTATCATTCTCTCTTTACACAGAGGATAA-TTTTATTTACCTTACCCC
EV529354       --> TGTTATCATTCTCTCTTTACACAGAGGATAAATCTTATTTACC--CCAGC
EV567605       --> TGTTATCATTCTCTCTTTACACAGAGGATAA-TCTTATTTACCTTACCCC
EX904888       --> TGTTATCATTCTCTCTTTACACAGAGGATAA-TCTTATTTACCTTACCCC
EY921272       --> TGTTATCATTCTCTCTTTACACAGAGGATAA-TCTTATTTACCTTACCC-
FD965418       --> TGTTATCATTCTCTCTTTACACAGAGGATAA-TCTTATTTACCTTACCCC
FD980250       --> TGTTATCACTCTCTCTTTACACAGAGGATAA-TCTTATTTACCTTACCCC
EX748917       --> TGTTATCATTCTCTCTTTACACAGAGGATAA-TCTTATTTACCTTACCCC
EX773065       --> TGTTATCATTCTCTCTTTACACAGAGGATAA-TCTTATTTACCTTACCCC
EV567165       --> TGTTATCATTCTCTCTTTACACAGAGGATAA-TCTTATTTACCCTACCCC
FY448558       --> TGTTATCATTCTCTCTTTACACAGAGGATAA-TCTTATTTACCTTACCCC
FD540125       --> ..................................................
EV525264       --> TGTTATCATTCTCTCTTTACACAGAGGATAAATCTTATTTACC--CCAGC

               598    -    648
UN23335        --> AGTTGTTATAAGAACAAAAAACATGTTTTTTTTCTTCCTTTTTTTCTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533116       <-- AGTTGTTATAAGAACAAAAA-CATGTTTTTTT-CTTCCTTTTTTTCTCTG  Raphanus raphanistrum subsp. maritimus
EX908702       <-- AGTTGTTATAAGAACAAAAAGCATGTTTTTTTTCTTCCTTTTTTTCTCTG  Raphanus sativus cv Rat-Tail Radish #3870
EY917457       <-- AGTTGTTATAAGAACAAAAAACATGTTTTTTTTCTTCCTTTTTT-CTCTG  Raphanus raphanistrum subsp. landra
FD976166       <-- AGTTGTTATAAGAACAAAAAACATGTTTTTTTTCTTCCTTTTTTTCTCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572154       <-- AGTTGTTATAAGAACAAAAAACATGTTTTTTTTCTTCCTTTTTT-CTTTG  Raphanus raphanistrum subsp. landra
EV572512       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX776911       <-- AGTTGTTATAAGAACAAAAAACATGTTTTTTTTCTTCCTTTTTT-CTCTG  Raphanus raphanistrum subsp. landra
FY428672       <-- AGTTGTTATAAGAACAAAAAACATGTTTTTTTTCTTCCTTTTTTTCTCTG  Raphanus sativus cv GSK3-1
EV529354       --> AGTTGTTATAAGAACAAAAA-CATGTTTTTTT-CTTCCTTTTTTTCTCTG  Raphanus raphanistrum subsp. maritimus
EV567605       --> AGTTGTTATAAGAACAAAAAACATGTTTTTTTTCTTCCTTTTTT-CTCTG  Raphanus raphanistrum subsp. landra
EX904888       --> AGTTGTTATAAGAACAAAAAGCATGTTTTTTTTCTTCCTTTTTT-CTCTG  Raphanus sativus cv Rat-Tail Radish #3870
EY921272       --> AGTTGTTATAAGAACAAAAAACATGTTTTTTTTCTTCCTTTTTT-CTCTG  Raphanus raphanistrum subsp. landra
FD965418       --> AGTTGTTATAAGAACAAAAAACATGTTTTTTTTCTTCCTTTTTTTCTCTG  Raphanus raphanistrum subsp. maritimus
FD980250       --> AGTTGTTATAAGAACAAAAAACATGTTTTTTTTCTTCCTTTTTTTCTCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748917       --> AGTTGTTATAAGAACAAAAA-CATGTTTTTTT-CTTCCTTTTTT-CTCTG  Raphanus raphanistrum subsp. maritimus
EX773065       --> AGTTGTTATAAGAACAAAAAACATGTTTTTTTTCTTCCTTTTTT-CTCTG  Raphanus raphanistrum subsp. landra
EV567165       --> AGTTGTTATAAGAACAAAAAACATGTTTTTTTTCTTCCTTTTTT-CTCTG  Raphanus raphanistrum subsp. landra
FY448558       --> AGTTGTTATAAGAACAAAAAACATGTTTTTTTTCTTCCTTTTTTTCTCTG  Raphanus sativus cv GSK3-1
FD540125       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525264       --> AGTTGTTATAAGAACAAAAA-CATGTTTTTTT-CTTCCTTTTTTTCTCTG  Raphanus raphanistrum subsp. maritimus

               648    -    698
UN23335        --> ATTTAGACCATTAA-TGTGTGTTTCTTGTTGC--GA-GACGACCATATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533116       <-- ATTTAGACCATTAA-TGTGTGTTTCTTGTTGCAAGACGACGACCATATCT
EX908702       <-- ATTTAGACCATTAA-TGTGTGTTTCTTGTTGC--GA-GACGACCATATCT
EY917457       <-- ATTTAGACCATTAA-TGTGTGTTTCTTGTTGC--GA-GACGACCATATCT
FD976166       <-- ATTTAGACCATTAA-TGTGTGTTTCTTGTTGC--GA-GACGACCATATCT
EV572154       <-- ATTTAGACCATTAA-TGTGTGTTTCTTGTTGC--GA-GACGACCATATCT
EV572512       <-- ..................................................
EX776911       <-- ATTTAGACCATTAA-TGTGTGTTTCTTGTTGC--GA-GACGACCATATCT
FY428672       <-- ATTTAGACCATTAA-TGTGTGTTTCTTGTTGC--GA-GACGACCATATCT
EV529354       --> ATTTAGACCATTAA-TGTGTGTTTCTTGTTGCAAGACGACGACCATATCT
EV567605       --> ATTTAGACCATTAAATGTGTGTTTCTTGTTG...................
EX904888       --> ATTTAGACCATTAA-TGTGTGTTTCTTGTTGC--GA-GACGACCATATCT
EY921272       --> ATTTAGACCATTAA-TGTGTGTTTCTTGTTGC--GA-GACGACCATATCT
FD965418       --> ATTTAGACCATTAA-TGTGTGTTTCTTGTTGC--GA-GACGACCATATCT
FD980250       --> ATTTAGACCATTAA-TGTGTGTTTCTTGTTGC--GA-GACGACCATATCT
EX748917       --> ATTTAGACCATTAA-TGTG...............................
EX773065       --> ATTTAGACCATTAA-TGTGTGTTTCTTGTTGC--GA-GACGACCATATCT
EV567165       --> ATTTAGACCATTAA-TGTGTGTTTCTTGTTGC--GA-GACGACCATATCT
FY448558       --> ATTTAGACCATTAA-TGTGTGTTTCTTGTTGC--GA-GACGACCATATCT
FD540125       --> ..................................................
EV525264       --> ATTTAGACCATTAA-TGTGTGTTTCTTGTTGCAAGACGACGACCATATCT

               698    -    748
UN23335        --> ATTGGTTTTGGATTGTTGAAATATTTGGTGTTTTAAAACAGTGAAAGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV533116       <-- ATTGGTTTTGGATTGTTGAAATATTTGGTGTTTTAAAACAGTGAAAGTTT  Raphanus raphanistrum subsp. maritimus
EX908702       <-- ATTGGTTTTGGATTGTTGAAATATTTGGTGTTTTAAATCAGTGAAAGTTT  Raphanus sativus cv Rat-Tail Radish #3870
EY917457       <-- ATTGGTTTTGGATTGTTGAAATATTTGGTGTTTT................  Raphanus raphanistrum subsp. landra
FD976166       <-- ATTGGTTTTGGATTGTTGAAATATTTGGTGTTTTAAATCAGTGAAAGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572154       <-- ATTGGTTTTGGATTGTTGAAATATTTGGTGTTTTAAAACAGTGAAAGTTT  Raphanus raphanistrum subsp. landra
EV572512       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX776911       <-- ATTGGTTTTGGATTGTTGAAATATTTGGTGTTTTAAAACAGTGAAAGTTT  Raphanus raphanistrum subsp. landra
FY428672       <-- ATTGGTTTTGGATTGTTG................................  Raphanus sativus cv GSK3-1
EV529354       --> ATTGGTTTTGGATTGTTGAAATATTTGGTGTTTTAAA-CAGTGAAAGTTT  Raphanus raphanistrum subsp. maritimus
EV567605       --> ..................................................  Raphanus raphanistrum subsp. landra
EX904888       --> ATTGGTTTTGGATTGTTGAAATATTTGGTGTTT--AATCAGTGAAAGTTT  Raphanus sativus cv Rat-Tail Radish #3870
EY921272       --> ATTGGTTTTGGATTGTTGAAATATTTGGTGTTTAAAAAaaaa........  Raphanus raphanistrum subsp. landra
FD965418       --> ATTGGTTTTGGATTGTT.................................  Raphanus raphanistrum subsp. maritimus
FD980250       --> ATTGGTTTTGGATTGTTGAAATATTTGGTGTTTTAA-TCAGTGAAAGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748917       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX773065       --> ATTGGTTTTGGAT-GTTGAAATATTTGGTGTTT--AAACAGTGAAAGTTT  Raphanus raphanistrum subsp. landra
EV567165       --> ATTGGTTTTGGATTGTTGAAATATTTGGTGTTTTAAAACAGTGAAAGTTT  Raphanus raphanistrum subsp. landra
FY448558       --> ATTGGTTTTGGATTGTTGAAATATTTGGTGTTTTAAATCAGTGAAAGTTT  Raphanus sativus cv GSK3-1
FD540125       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV525264       --> ATTGGTTTTGGATTGTTGAAATATTTGGTGTTTTAAAACAGTGAAAGTTT  Raphanus raphanistrum subsp. maritimus

               748    -    798
UN23335        --> CCTACCCTAAGA
                   ~~~~~~~~~~~~
EV533116       <-- CCTACC......
EX908702       <-- CCTACCCT....
EY917457       <-- ............
FD976166       <-- CCTACCC.....
EV572154       <-- CCTACCg.....
EV572512       <-- ............
EX776911       <-- CCTACCtc....
FY428672       <-- ............
EV529354       --> CCTACC......
EV567605       --> ............
EX904888       --> CCTACCCTAAGA
EY921272       --> ............
FD965418       --> ............
FD980250       --> CC..........
EX748917       --> ............
EX773065       --> CCTACCtc....
EV567165       --> CCTACCg.....
FY448558       --> CCTA........
FD540125       --> ............
EV525264       --> CCTACC......