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Alignment for radish unigene UN23344

               1      -     51
UN23344        --> GTTTCAATGAAACATCAGGAATATGGTATTACAAATAGTAAAATCACATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524798       <-- GTTTCAATGAAACATCAGGAATATGATATTACAAATAGTAAAATCACATA
EX757741       <-- ..................................................
FD560890       <-- ..................................................
EX765752       <-- ..................................................
FD973907       <-- ..................................................
EX754159       <-- ..................................................
FD540509       <-- ..................................................
EY907049       <-- ..................................................
FD935256       --> GTTTCAATGAAACATCAGGAATATGGTATTACAAATAGTAAAACCACATA
FD961393       --> ..................................................
FD565197       --> ..................................................
FD969498       --> ..................................................
EY945637       --> ..................................................
EY903087       --> ..................................................

               51     -    101
UN23344        --> GAATTCAAGCTCACACGAAGCAGTCGATCACCAAGACAAAACATCATAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524798       <-- GAATTCAAGCTCACACGAAGCAGTCGATCACCAAGACAAAACATCATAGG
EX757741       <-- ..ATTCA-GCTCACACGAAGCAGTCGATCACCA-GACAAA-CATCATAGG
FD560890       <-- .........................gcTCACCAAGACAAAACATCATAGG
EX765752       <-- ................................................GG
FD973907       <-- ..................................................
EX754159       <-- ..................................................
FD540509       <-- ..................................................
EY907049       <-- ..................................................
FD935256       --> GAATTCAAGCTCACACGAAGCAGTCGATCACCAAGACAAAACATCATAGG
FD961393       --> .....CAAGCTCACACGAAGCAGTCGATCACCAAGACAAAACATCATAGG
FD565197       --> .........................gcTCACCAAGACAAAACATCATAGG
FD969498       --> ............................cgCCAAGACAAAACATCATAGG
EY945637       --> ..............................................cAGG
EY903087       --> ..................................................

               101    -    151
UN23344        --> TTTCACAATCTGTCTTTTCATTACAGAGAGTTTTGATACACATGCAGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524798       <-- TTTCACAATCTGTCTTTTCATTACAGAGAGTTTTGATACACATGCAGCTC  Raphanus raphanistrum subsp. maritimus
EX757741       <-- TTTCACAATCTGTCTTT-CA-TACAGAGAGTT-CGATACACATGAAGCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD560890       <-- TTTCACAATCTGTCTTTTCATTACAGAGAGTTTTGATACACATGCAGCTC  Raphanus sativus var. oleiformis
EX765752       <-- TTTCACAATCTGTCTTTTCATTACAGAGAGTTTTGATACACATGCAGCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD973907       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754159       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540509       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907049       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD935256       --> TTTCACAATCTGTCTTTTCATTACAGGGAGTTTTGATACACATGCAGCTC  Raphanus sativus var. oleiformis
FD961393       --> TTTCACAATCTGTCTTTTCATTACAGAGAGTTTTGATACACATGCAGCTC  Raphanus raphanistrum subsp. maritimus
FD565197       --> TTTCACAATCTGTCTTTTCATTACAGAGAGTTTTGATACACATGCAGCTC  Raphanus sativus var. oleiformis
FD969498       --> TTTCACAATCTGTCTTTTCATTACAGAGAGTTTTGATACACATGAAGCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945637       --> TTTCACAATCTGTCTTTTCATTACAGAGAGTTTTGATACACATGAAGCTC  Raphanus sativus cv Rat-Tail Radish #3870
EY903087       --> ...................ATTACAGAAAGTTTTGATACACATGAAGCTC  Raphanus raphanistrum subsp. raphanistrum (MS)

               151    -    201
UN23344        --> ATAGGACACATTACTACCATTTTTTTTACAAGTCACTAGTTCAGAGGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524798       <-- ATAGGACACATTACTATCATTTTTTTTACAAGTCACTAGTTCAGAGGGAT
EX757741       <-- ATAGGACACATTACTACCATTTTTTT-ACAAGTCACTAGTTCAGAGGGAT
FD560890       <-- ATAGGACACATTACTACCATTTTTTTTACAAGTCACTAGTTCAGAGGGAT
EX765752       <-- ATAGGACACATTACTATCATTTTTTTTACAAGTCACTAGTTCAGAGGGAT
FD973907       <-- ..................................................
EX754159       <-- ..................................................
FD540509       <-- ..................................................
EY907049       <-- ..................................................
FD935256       --> ATAGGACACATTACTACCATTTTTTTTACAAGTCACTAGTTCAAAGGGAT
FD961393       --> ATAGGACACATTACTATCATTTTTTTTACAAGTCACTAGTTCAAAGGGAT
FD565197       --> ATAGGACACATTACTACCATTTTTTTTACAAGTCACTAGTTCAGAGGGAT
FD969498       --> ATAGGACACATTACTACCATTTTTTTTACAAGTCACTAGTTCAAAGGGAT
EY945637       --> ATAGGGCACATTACTACCATTTTTT--ACAAGTCACTAGTTCAAAGGGAT
EY903087       --> ATAGGACACATTACTACCATTTTTTT-ACAAGTCACTAGTTCAGAGGGAT

               201    -    251
UN23344        --> AACAATATCGCCAATGTTTTTGTGCCATGGATCCGCCAAGTGAGTAGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524798       <-- AACAATATCGCCAATGTTTTTGTGCCATGGATCCGCCAAGTGAGTAGCCA  Raphanus raphanistrum subsp. maritimus
EX757741       <-- AACAATATCGCCAATGTTTTTGTGCCATGGATCAGCCAAGTGAGTAGCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD560890       <-- AACAATATCGCCAATGTTTTTGTGCCATGGATCCGCCAAGTGAGTAGCCA  Raphanus sativus var. oleiformis
EX765752       <-- AACAATATCGCCAATGTTTTTGTGCCATGGATCCGCCAAGTGAGTAGCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD973907       <-- .......................GCCATGGATCAGCCAAGTG-GTAGCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754159       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540509       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907049       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD935256       --> AACAATATCGCCAATGTTTTTGTGCCATGGATCCGCCAAGTGAGTAGCCA  Raphanus sativus var. oleiformis
FD961393       --> AACAATATCGCCAATGTTTTTGTGCCATGGATCCGCCAAGTGAGTAGCCA  Raphanus raphanistrum subsp. maritimus
FD565197       --> AACAATATCGCCAATGTTTTTGTGCCATGGATCCGCCAAGTGAGTAGCCA  Raphanus sativus var. oleiformis
FD969498       --> AACAATATCGCCAATGTTTTTGTGCCATGGATCAGCCAAGTGGGTAGCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945637       --> AACAATATCCCCAATGTTTTTGTGCCATGGATCAGCCAAGTGAGTAGCCA  Raphanus sativus cv Rat-Tail Radish #3870
EY903087       --> AACAATATCGCCGATGTTTTTGTGCCATGGATCAGCCAAGTGAGTAGCCA  Raphanus raphanistrum subsp. raphanistrum (MS)

               251    -    301
UN23344        --> AGTTCTCCAATGGTCCTGTCCCTGGGTAAGCCGATTGCTGCACACAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524798       <-- AGTTCTCCAATGGTCCTGTCCCTGGGTAAGCCGATTGCTGCACACAGAAG
EX757741       <-- AGTTCTCCAATGGTCCTGTCCCTGGGTAAGCCGATTGCTGCACACAGAAG
FD560890       <-- AGTTCTCCAATGGTCCTGTCCCTGGGTAAGCCGATTGCTGCACACAGAAG
EX765752       <-- AGTTCTCCAATGGTCCTGTCCCTGGGTAAGCCGATTGCTGCACACAG...
FD973907       <-- AGTTCTCCAATGGTCCTGTCCCTGGGTAAGCCGATTGCTGCACACAGAAG
EX754159       <-- ..........atGTCCTGTCCCTGGGTA-GCCGAT-GCTGCACACAGAAG
FD540509       <-- ..................................................
EY907049       <-- ..................................................
FD935256       --> AGTTCTCCAATGGTCCTGTCCCTGGGTAAGCCGATTGCTGCACACAGAAG
FD961393       --> AGTTCTCCAATGGTCCTGTCCCTGGGTAAGCCGATTGCTGCACACAGAAG
FD565197       --> AGTTCTCCAATGGTCCTGTCCCTGGGTAAGCCGATTGCTGCACACAGAAG
FD969498       --> AGTTCTCCAATGGTCCTGTCCCTGGGTAAGCCGATTGCTGCACACAGAAG
EY945637       --> AGTTCTCCAATGGTCCTGTCCCTGGGTAAGCCGATTGCTGCACACAGAAG
EY903087       --> AGTTCTCCAATGGTCCTGTCCCTGGGTAAGCCGATTGCTGCACACAGAAG

               301    -    351
UN23344        --> CCTACAAAGGCCAACAACGCAAGCCTCCCGTTCTTGATCTCCTTAACTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524798       <-- CCTACAAAGGCCAACAACGCAAGCCTCCCGTTCccccgg...........  Raphanus raphanistrum subsp. maritimus
EX757741       <-- CCTACAAACGCCAACAACGCAAGCCTCCCGTTCTTGATCTCCTTAACTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD560890       <-- CCTACAAAGGCCAACAACGCAAGCCTCCCGTTCTTGATCTCCTTAACTTT  Raphanus sativus var. oleiformis
EX765752       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD973907       <-- C-TACAAACGCCAACAACGCAAGCCTCCCGTTCTTGATCTCCTTAACTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754159       <-- CCTACAAACGCCAACAACGCAAGC-TCCCGT-CTTGATCTC-TTAACTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540509       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907049       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD935256       --> CCTACAAAGGCCAACAACGCAAGCCTCCCGTTCTTGATCTCCTTAACTTT  Raphanus sativus var. oleiformis
FD961393       --> CCTACAAAGGCCAACAACGCAAGCCTCCCGTTCTTGATCTCCTTAACTTT  Raphanus raphanistrum subsp. maritimus
FD565197       --> CCTACAAAGGCCAACAACGCAAGCCTCCCGTTCTTGATCTCCTTAACTTT  Raphanus sativus var. oleiformis
FD969498       --> CCTACAAACGCCAACAACGCAAGCCTCCCGTTCTTGATCTCCTTAACTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945637       --> CCTACAAAGGCCAACAACGCAAGCCTCCCGTTCTTGATCTCCTTAACTTT  Raphanus sativus cv Rat-Tail Radish #3870
EY903087       --> CCTACAAACGCCAACAACGCAAGCCTCCCGTTCTTGATCTCCTTAACTTT  Raphanus raphanistrum subsp. raphanistrum (MS)

               351    -    401
UN23344        --> CAACTCCTCAAACTTCTTGGGGTCTTTGGAGTATCCAAGAGGGTCAAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524798       <-- ..................................................
EX757741       <-- CAACTCCTCAAACTTCTTGGGGTCTTTGGAGTATCCAAGAGGGTCAAATG
FD560890       <-- CAACTCCTCAAACTTCTTGGGGTCTTTGGAGTATCCAAGAGGGTCAAATG
EX765752       <-- ..................................................
FD973907       <-- CAACTCCTCAAACTTCTTGGGGTCTTCGGAGTATCCAAGAGGGTCAAATG
EX754159       <-- CAACTCCTCAAACTTCTTGGGGTCTTTGGAGTATCCAAGAGGGTCAAATG
FD540509       <-- .......................CTTTGGAGTATCCAAGAGGGTCAAATG
EY907049       <-- ..................................................
FD935256       --> CAACTCCTCAAACTTCTTGGGGTCTTTGGAGTATCCAAGAGGGTCAAATG
FD961393       --> CAACTCCTCAAACTTCTTGGGGTCTTTGGAGTATCCAAGAGGGTCAAATG
FD565197       --> CAACTCCTCAAACTTCTTGGGGTCTTTGGAGTATCCAAGAGGGTCAAATG
FD969498       --> CAACTCCTCAAACTTCTTGGGGTCTTCGGAGTATCCAAGAGGGTCAAATG
EY945637       --> CAACTCCTCAAACTTCTTGGGATCTTTGGAGTATCCAAGAGGGTCAAATG
EY903087       --> CAACTCCTCAAACTTCTTGGGGTCTTTGGAGTATCCAAGAGGGTCAAATG

               401    -    451
UN23344        --> CACCTCCCGGGTACTTCTTTTTCTCAGGGTCTTTCTCCATGCTCCTCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524798       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX757741       <-- CACCTCCCGGGTACTTCTTTTTCTCAGGGTCTTTCTCCATGCTCCTCTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD560890       <-- CACCTCCAGGGTATTTCTTTTTCTCAGGGTCTTTCTCCATGCTCCaccgc  Raphanus sativus var. oleiformis
EX765752       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD973907       <-- CACCTCCCGGGTACTTCTTTTTCTCAGGGTCTTTCTCCATGCTCCTCTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754159       <-- CACCTCCCGGGTACTTCTTTTTCTCAGGGTCTTTCTCCATGCTCCTCTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540509       <-- CACCTCCCGGGTACTTCTTTTTCTCAGGGTCTTTCTCCATGCTCCTCTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907049       <-- ......................CTCAGGGTCTTTCTCCATGCTC-TCTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD935256       --> CACCTCCAGGGTATTTCTTTTTCTCAGGGTCTTTCTCCATGCTCCTCTGG  Raphanus sativus var. oleiformis
FD961393       --> CACCTCCAGGGTACTTCTTTTTCTCAGG......................  Raphanus raphanistrum subsp. maritimus
FD565197       --> CACCTCCAGGGTATTTCTTTTTCTCAGGGTCTTTCTCCATGCTCCaccgc  Raphanus sativus var. oleiformis
FD969498       --> CACCTCCCGGGTACTTCTTTTTCTCAGGGTCTTTCTCCATGCTCCTCTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945637       --> CACCTCCCGGGTACTTCTTTTTCTCAGGGTCTTTCTCCATGCTCCTCTGG  Raphanus sativus cv Rat-Tail Radish #3870
EY903087       --> CACCTCCCGGGTACTTCTTTTTCTCAGGGTCTTTCTCCATGCTCCTCTGG  Raphanus raphanistrum subsp. raphanistrum (MS)

               451    -    501
UN23344        --> TGCTCAACAAAGGCAATAGCTAAGAACTCTATAGCCAAGATTGTTGGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524798       <-- ..................................................
EX757741       <-- TGCTCAACAAAGGCAATAGCTAAGAACTCTATAGCCAAGATTGTTGGCAG
FD560890       <-- ttgtgcgggcccccgtcaattccc..........................
EX765752       <-- ..................................................
FD973907       <-- TGCTCAACAAAGGCAATAGCTAAGAACTCTATAGCCAAGATTGTTGGCAG
EX754159       <-- TGCTCAACAAAGGCAATAGCTAAGAACTCTATAGCCAAGATTGTTGGCAG
FD540509       <-- TGCTCAACAAAGGCAATAGCTAAGAACTCTATAGCCAAGATTGTTGGCAG
EY907049       <-- TGCTCAACAAAGGCAATAGCTAAGAACTCTATAGCCAAGATTGTTGGCAG
FD935256       --> TGCTCAACAAAGGCAATAGCTAAGAACTCTATAGCC..............
FD961393       --> ..................................................
FD565197       --> ttgtgcgggcccccgtcaattccc..........................
FD969498       --> TGCTCAACAAAGGCAATAGCTAAAAACTCTATAGCCAAAATTGTTGGCAG
EY945637       --> TGCTCAACAAAGGCAATAGCTAAAAACTCTATAGCCAAGATTGTGGGCAG
EY903087       --> TGCTCAACAAAGGCAATAGCTAAAAACTCTATAGCCAAGATTGTTGGCAG

               501    -    551
UN23344        --> AGTACCCCATGGGACCGGGTTGCCCAAGTAAGTGGCTTGTCCTCCAGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524798       <-- ..................................................
EX757741       <-- AGTACCCCATGGGACCGGGTTGCCCAAGTAAGTGGCTTGTCCTCCAGGTA
FD560890       <-- ..................................................
EX765752       <-- ..................................................
FD973907       <-- AGTACCCCATGGGACCGGGTTGCCCAAGTAAGTGGCTTGTCCTCCAGGTA
EX754159       <-- AGTACCCCGTGGGACCGGATTGCCCAAGTAAGTGGCTTGTCCTCCAGGTA
FD540509       <-- AGTACCCCGTGGGACCGGATTGCCCAAGTAAGTGGCTTGTCCTCCAGGTA
EY907049       <-- AGTACCCCATGGGACCGGGTTGCCCAAGTAAGTGGCTTGTCCTCCAGGTA
FD935256       --> ..................................................
FD961393       --> ..................................................
FD565197       --> ..................................................
FD969498       --> AGTACCCCATGGGACCGGGTTGCCCAAGTAAGTGGCTTGTCCTCCAGGTA
EY945637       --> AGTACCCCATGGGACCGGGTTGCCCAAGTAAGTGGCTTGTCCTCCAGGTA
EY903087       --> AATACCCCATGGGACCGGGTTGCCCAAGTAAGTGGCTTGTCCTCCAGGTA

               551    -    601
UN23344        --> CTGCTGCCCATTCTTGAGCCTTGACCCAGTTTCCGTATCCCAAAGCCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524798       <-- ..................................................
EX757741       <-- CTGCTGCCCATTCTTGAGCCTTGACCCAGTTTCCGTATCCCAAAGCCTCT
FD560890       <-- ..................................................
EX765752       <-- ..................................................
FD973907       <-- CTGCTGCCCATTCTTGAGCCTTGACCCAGTTTCCGTATCCCAAAGCCTCT
EX754159       <-- CTGCTGCCCATTCTTGAGCCTTGGCCCAGTTTCCGTATCCCAAAGCCTCT
FD540509       <-- CTGCTGCCCATTCTTGAGCCTTGGCCCAGTTTCCGTATCCCAAAGCCTCT
EY907049       <-- CTGCTGCCCATTCTTGAGCCTTGACCCAGTTTCCGTATCCCAAAGCCTCT
FD935256       --> ..................................................
FD961393       --> ..................................................
FD565197       --> ..................................................
FD969498       --> CTGCTGCCCATTCTTGAGCCTTGACCCAGTTTCCGTATCCCAAAGCCTCT
EY945637       --> CTGCTGCCCACTCTTGAGCCTTGACCCAGTTTCCGTATCCCAAAGCCTCT
EY903087       --> CTGCTGCCCATTCTTGAGCCTTGACCCAGTTTCCGTATCCCAAAGCCTCT

               601    -    651
UN23344        --> GGTACCAAAATCCCTGGAACAGCGAGCATAGCCCATCTACAGTGGATGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524798       <-- ..................................................
EX757741       <-- GGTACCAAAATCCCTGGAACAGCGAGCATAGCCCATCTACAGTGGATGAG
FD560890       <-- ..................................................
EX765752       <-- ..................................................
FD973907       <-- GGTACCAAAATCCCTGGAACAGCGAGCATAGCCCATCTACAGTGGATGAG
EX754159       <-- GGTACCAAAATCCCTGGAACAGCGAGCATAGCCCATCTACAGTGGATGAG
FD540509       <-- GGTACCAAAATCCCTGGAACAGCGAGCATAGCCCATCTACAGTGGATGAG
EY907049       <-- GGTACCAAAATCCCTGGAACAGCGAGCATAGCCCATCTACAGTGGATGAG
FD935256       --> ..................................................
FD961393       --> ..................................................
FD565197       --> ..................................................
FD969498       --> GGTACCAAAATCCCTGGAACAGCGAGCATAGCCCATCTACAGTGGATGAG
EY945637       --> GGTACCAAAATCCCTGGAACAGCAAGC.......................
EY903087       --> GGTACCAAAATCCCTGGAACAGCGAGCATAGCCCATCTACAGTGGATGAG

               651    -    701
UN23344        --> CTCTGATTCTTTGTACCTCTCAAGGTTCTCTGGAACCTCTCCAAGTCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524798       <-- ..................................................
EX757741       <-- CTCCGATTCTTTGTACCTCTCAAGGTTCTCTGGAACCTCTCCAAGTCCAA
FD560890       <-- ..................................................
EX765752       <-- ..................................................
FD973907       <-- CTCTGATTCTTTGTACCTCTCAAGGTTCTCTGGAACCTCTCCAAGTCCAA
EX754159       <-- CTCTGATTCTTTGTACCTCTCAAGGTTCTCTGGAACCTCTCCAAGTCCAA
FD540509       <-- CTCTGATTCTTTGTACCTCTCAAGGTTCTCTGGAACCTCTCCAAGTCCAA
EY907049       <-- CTCTGATTCTTTGTACCTCTCAAGGTTCTCTGGAACCTCTCCAAGTCCAA
FD935256       --> ..................................................
FD961393       --> ..................................................
FD565197       --> ..................................................
FD969498       --> CTCTGATTCTTTGTACCTCTCAAGGT........................
EY945637       --> ..................................................
EY903087       --> CTCTGATTCTTTGTACCTCTCAAGGTTCTCTGGAACCTCTCCAAGTCCAA

               701    -    751
UN23344        --> GAGGGTCAAACCCAAAGTCACCAGGAGCAGAACCGTCGAGGTAAGCGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524798       <-- ..................................................
EX757741       <-- GAGGGTCAAACCCAAAGTCACCAGGAGCAGAACCGTCGAGGTAAGCGGGA
FD560890       <-- ..................................................
EX765752       <-- ..................................................
FD973907       <-- GAGGGTCAAACCCAAAGTCACCAGGAGCAGAACCGTCGAGGTAAGCGGGA
EX754159       <-- GAGGGTCAAACCCAAAGTCACCAGGAGCAGAACCGTCGAGGTAAGCGGGA
FD540509       <-- GAGGGTCAAACCCAAAGTCACCAGGAGCAGAACCGTCGAGGTAAGCGGGA
EY907049       <-- GAGGGTCAAACCCAAAGTCACCAGGAGCAGAACCGTCGAGGTAAGCGGGA
FD935256       --> ..................................................
FD961393       --> ..................................................
FD565197       --> ..................................................
FD969498       --> ..................................................
EY945637       --> ..................................................
EY903087       --> GAGGGTCAAA........................................

               751    -    801
UN23344        --> CGTGGCTCGCCGGGCATCCAGTGAGCAGCCATTCTGATACGGCCAACGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524798       <-- ..................................................
EX757741       <-- CGTGGCTCGCCGGGCATCCAGTGAGCAGCCATTCc...............
FD560890       <-- ..................................................
EX765752       <-- ..................................................
FD973907       <-- CGTGGCTCGCCGGGCATCCAGTGAGCAGCCATTCTGATACGGCCAACGTT
EX754159       <-- CGTGGCTCGCCGGGCATCCAGTGAGCAGCCATTCTGATACGGCCAACGTT
FD540509       <-- CGTGGCTCGCCGGGCATCCAGTGAGCAGCCATTCTGATACGGCCAACGTT
EY907049       <-- CGTGGCTCGCCGGGCATCCAGTGAGCAGCCATTCTGATACGGCCAACGTT
FD935256       --> ..................................................
FD961393       --> ..................................................
FD565197       --> ..................................................
FD969498       --> ..................................................
EY945637       --> ..................................................
EY903087       --> ..................................................

               801    -    851
UN23344        --> CCCGGCATTGGGGAGGGCAAATCCGGAGGAGACGAATTTAGACTTTGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524798       <-- ..................................................
EX757741       <-- ..................................................
FD560890       <-- ..................................................
EX765752       <-- ..................................................
FD973907       <-- CCCGGCATTGGGGAGGGCAAATCCGGAGGAGACGAATTTAGACTTTGAAG
EX754159       <-- CCCGGCATTGGGGAGGGCAAATCCGGAGGAGACGAATTTAGACTTTGAAG
FD540509       <-- CCCGGCATTGGGGAGGGCAAATCCGGAGGAGACGAATTTAGACTTTGAAG
EY907049       <-- CCCGGCATTGGGGAGGGCAAATCCGGAGGAGACGAATTTAGACTTTGAAG
FD935256       --> ..................................................
FD961393       --> ..................................................
FD565197       --> ..................................................
FD969498       --> ..................................................
EY945637       --> ..................................................
EY903087       --> ..................................................

               851    -    901
UN23344        --> AAGAAAGAAGAGAAGGGTAGACGGCGGCGATGCCGCAGCTCATGAGCGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524798       <-- ..................................................
EX757741       <-- ..................................................
FD560890       <-- ..................................................
EX765752       <-- ..................................................
FD973907       <-- AAGAAAGAAGAGAAGGGTAGACGGCGGCGATGCCGCAGCTCATGAGCGAG
EX754159       <-- AAGAAAGAAGAGAAGGGTAGACGGCGGCGATGCCGCAACTCATGAGCGAG
FD540509       <-- AAGAAAGAAGAGAAGGGTAGACGGCGGCGATGCCGCAACTCATGAGCGAG
EY907049       <-- AAGAAAGAAGAGAAGGGTAGACGGCGGCGATGCCGCAGCTCATGAGCGAG
FD935256       --> ..................................................
FD961393       --> ..................................................
FD565197       --> ..................................................
FD969498       --> ..................................................
EY945637       --> ..................................................
EY903087       --> ..................................................

               901    -    951
UN23344        --> TTCGACGCCATTGTATTCTCCGATCTCTCTCTCCCTCTCTCTCCCTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524798       <-- ..................................................
EX757741       <-- ..................................................
FD560890       <-- ..................................................
EX765752       <-- ..................................................
FD973907       <-- TTCGACGCCATTGTATTCTCCGATCTCTCTCTCCCTCTCT--CCCTTTCT
EX754159       <-- TTCGACGCCATTGTATTCTCCGATCTCTCTCTCCCTCTCTCTCCCTTTCT
FD540509       <-- TTCGACGCCATTGTATTCTCCGATCTCTCTCTCCCTCTCTCTCCCTTTCT
EY907049       <-- TTCGACGCCATTGTATTCTCCGATCTCTCTCTCCCTCTCTCTCCCTTTCT
FD935256       --> ..................................................
FD961393       --> ..................................................
FD565197       --> ..................................................
FD969498       --> ..................................................
EY945637       --> ..................................................
EY903087       --> ..................................................

               951    -   1001
UN23344        --> GTTTGCTACAAAGAAGAAAGATGTGAACGAGAGGTGTGTGTTGGATGTC.
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524798       <-- ..................................................
EX757741       <-- ..................................................
FD560890       <-- ..................................................
EX765752       <-- ..................................................
FD973907       <-- GTTTGCTACAAAGAAGAAAGATGTGAACGAGAGGTGTGTc..........
EX754159       <-- GTTTGCTACAAAGAAGAAAGATGTGAACGAGAGGTGTGTGTTGGATGTCc
FD540509       <-- GTTTGCTACAAAGAAGAAAGATGTGAACGAGAGGTGTGTGTTGGATGTCc
EY907049       <-- GTTTGCTACAAAGAAGAAAGATGTGAACGAGAGGTGTGTGTTGGATGTtg
FD935256       --> ..................................................
FD961393       --> ..................................................
FD565197       --> ..................................................
FD969498       --> ..................................................
EY945637       --> ..................................................
EY903087       --> ..................................................

               1001   -   1051
UN23344        --> .......
                   ~~~~~~~
EV524798       <-- .......
EX757741       <-- .......
FD560890       <-- .......
EX765752       <-- .......
FD973907       <-- .......
EX754159       <-- ct.....
FD540509       <-- ct.....
EY907049       <-- tcagtcc
FD935256       --> .......
FD961393       --> .......
FD565197       --> .......
FD969498       --> .......
EY945637       --> .......
EY903087       --> .......