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Alignment for radish unigene UN23356

               1      -     51
UN23356        --> GGATAAAGAACATGTCTAAGATTCTTAGCAAGATTTATAAGTGAGAGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755491       <-- ..................................................
EX887231       <-- ..................................................
FD533479       <-- ..................................................
EV570141       <-- ..................................................
FD532809       <-- ..................................................
EX758129       <-- ..................................................
EY932388       <-- ..................................................
EX759561       --> GGATAAAGAACATGTCTAAGATTCTTAGCAAGATTTATAAGTGAGAGCCA
EY928525       --> ..................................................
EV574506       --> ..................................................
EX891426       --> ..................................................
FD529646       --> ..................................................
EY928126       --> ..................................................

               51     -    101
UN23356        --> TGTAGTAATGACACATGACTGAAAACAGCGACTCAGGTTTTGTGAATGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755491       <-- ..................................................
EX887231       <-- ..................................................
FD533479       <-- ..................................................
EV570141       <-- ..................................................
FD532809       <-- ..................................................
EX758129       <-- ..................................................
EY932388       <-- ..................................................
EX759561       --> TGTAGTAATGACACATGACTGAAAACAGCGACTCAGGTTTTGTGAATGAC
EY928525       --> ..................................................
EV574506       --> ..................................................
EX891426       --> ..................................................
FD529646       --> ..................................................
EY928126       --> ..................................................

               101    -    151
UN23356        --> CAACCACCCAACCATAAAACGATCATTTTTTTTTTCTTTTTCTTTGGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755491       <-- ..................................................
EX887231       <-- ..................................................
FD533479       <-- ..................................................
EV570141       <-- ..................................................
FD532809       <-- ..................................................
EX758129       <-- ..................................................
EY932388       <-- ..................................................
EX759561       --> CAACCACCCAACCATAAAACGATCATTTTTTTTTTCTTTTTCTTTGGTCC
EY928525       --> .........................................ccTTGGTCC
EV574506       --> ..................................................
EX891426       --> ..................................................
FD529646       --> ..................................................
EY928126       --> ..................................................

               151    -    201
UN23356        --> TTGAAAGAGAGGACAGGGATATACAAAGGGAAACCAAGACCCACAACACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755491       <-- ...AAAGAGAGGACAGGGATATACAAAGGGAAACCAAGACCCACAACACA
EX887231       <-- ...AAAGAGAG-ACAGGGATATACAAAGGGAAACCAAGACCCACAACACA
FD533479       <-- ....AAGAGAGGACAGGGATATACAAAGG-AAACCAAGACCCACAACACA
EV570141       <-- ..........GGACAGGGATATACAAAGGGAAACCAAGACCCACAACACA
FD532809       <-- ..........GGACAGGGATATACAAAGGGAA-CCAAGACCCACAACACA
EX758129       <-- ..................................................
EY932388       <-- ..................................................
EX759561       --> TTGAAAGAGAGGACAGGGATATACAAAGGGAAACCAAGACCCACAACACA
EY928525       --> TTGAAAGAGAGGACAGGGATATACAAAGGGAAACCAAGACCCACAACACA
EV574506       --> ..........GGACAGGGATATACAAAGGGAAACCAAGACCCACAACACA
EX891426       --> ..........GGACAGGGATATACAAAGGGAAACCAAGACCCACAACACA
FD529646       --> ..........GGACAGGGATATACAAAGGGAAACCAAGACCCACAACACA
EY928126       --> ..................................................

               201    -    251
UN23356        --> TACAAAGGATAATAAAACTGTTTTCACTCGACCCTTGCTTGCGTTATTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755491       <-- TACAAAGGATAATAAAACTGTTTTCACTCGACCCT----TGCGTTATTCT
EX887231       <-- TACAAAGGATAATAAA-CTGTTTTCACTCGACCCTTGCTTGCGTTATTCT
FD533479       <-- TACAAAGGATAATAAAACTGTTTTCACTCGACCCTTGCTTGCGTTATTCT
EV570141       <-- TACAAAGGATAATAAAACTGTTTTCACTCGACCCTTGCTTGCGTTATTCT
FD532809       <-- TACAAAGGATAATAAAACTGTTTTCACTCGACCCTTGCTTGCGTTATTCT
EX758129       <-- ............................cactcgcccCTTGCGTTATTCT
EY932388       <-- ..................................................
EX759561       --> TACAAAGGATAATAAAACTGTTTTCACTCGACCCTTGC----GTTATTCT
EY928525       --> TACAAAGGATAATAAAACTGTTTTCACTCGACCCTTGCTTGCGTTATTCT
EV574506       --> TACAAAGGATAATAAAACTGTTTTCACTCGACCCTTGCTTGCGTTATTCT
EX891426       --> TACAAAGGATAATAAAACTGTTTTCACTCGACCCTTGCTTGCGTTATTCT
FD529646       --> TACAAAGGATAATAAAACTGTTTTCACTCGACCCTTGCTTGCGTTATTCT
EY928126       --> ..................................................

               251    -    301
UN23356        --> ATATTTGCGTGATAAAAGAACAAGTTCTTGTAATAAA-TAGTAAGACTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755491       <-- ATATTTGCGTGATAAAAGAACAAGTTCTTGTAATAAAATAGTAAGACTAA
EX887231       <-- ATATTTGCGTGATAAAAGAACAAGTTCTTGTAATAAA-TAGTAAGACTAA
FD533479       <-- ATATTTGCGTGATAAAAGAACAAGTTCTTGTAATAAA-TAGTAAGACTAA
EV570141       <-- ATATTTGCGTGATAAAAGAACAAGTTCTTGTAATAAA-TAGTAAGACTAA
FD532809       <-- ATATTTGCGTGATAAAAGAACAAGTTCTTGTAATAAA-TAGTAAGACTAA
EX758129       <-- ATATT-GCGTGATAAAAGAACAAGTTCTTGTAATAAAATAGTAAGACTAA
EY932388       <-- ..................................................
EX759561       --> ATATTTGCGTGATAAAAGAACAAGTTCTTGTAATAAAATAGTAAGACTAA
EY928525       --> ATATTTGCGTGATAAAAGAACAAGTTCTTGTAATAAA-TAGTAAGACTAA
EV574506       --> ATATTTGCGTGATAAAAGAACAAGTTCTTGTAATAAA-TAGTAAGACTAA
EX891426       --> ATATTTGCGTGATAAAAGAACAAGTTCTTGTAATAAA-TAGTAAGACTAA
FD529646       --> ATATTTGCGTGATAAAAGAACAAGTTCTTGTAATAAA-TAGTAAGACTAA
EY928126       --> ..................................................

               301    -    351
UN23356        --> AAA-GGACATGACATTTATTTTG-TAGCAA-GCTTTTTTGCAACTCCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755491       <-- AAA-GGACACGACATTTATTTTG-TAGCAAAGCTTT--TGCAACTCCTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887231       <-- AAAAGGACATGACATTTATTTTGGTAGCAAAGCTTT--TGCAACTCGTCA  Raphanus sativus var. oleiformis
FD533479       <-- AAA-GGACATGACATTTATTTTG-TAGCAA-GCTTTTTTGCAACTCCTCA  Raphanus raphanistrum subsp. maritimus
EV570141       <-- AAA-GGAAATGACATTTATTTTG-TAGCAA-GCTTTTTTGCAACTCCTCA  Raphanus raphanistrum subsp. landra
FD532809       <-- AAA-GGACATGACATTTATTTTG-TAGCAA-GCTTTTTTGCAACTCCTCA  Raphanus raphanistrum subsp. maritimus
EX758129       <-- AAA-GGACACGACATTTATTTTG-TAGCAAAGCTTT--TGCAACTCCTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932388       <-- ........................ggtagcaaagcTTTTGCAACTCGTCA  Raphanus sativus var. oleiformis
EX759561       --> AAA-GGACACGACATTTATTTTG-TAGCAAAGCTTTT--GCAACTCCTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928525       --> AAAAGGACATGACATTTATTTTGGTAGCAAAGCTTTT--GCAACTCGTCA  Raphanus sativus var. oleiformis
EV574506       --> AAA-GGAAATGACATTTATTTTG-TAGCAA-GCTTTTTTGCAACTCCTCA  Raphanus raphanistrum subsp. landra
EX891426       --> AAAAGGACATGACATTTATTTTGGTAGCAAAGCTTTT--GCAACTCGTCA  Raphanus sativus var. oleiformis
FD529646       --> AAA-GGACATGACATTTATTTTG-TAGCAA-GCTTTTTTGCAACTCCTCA  Raphanus raphanistrum subsp. maritimus
EY928126       --> ........................ggtagcaaagcTTTTGCAACTCGTCA  Raphanus sativus var. oleiformis

               351    -    401
UN23356        --> ACTAAGTTATTCGGAGGAATTCACCCACACCACTGCGAGGGTCACAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755491       <-- ACTAAGTTATTCGGAGGAATTCACCCACACCACTGCGAGGGTCACAAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887231       <-- ACTA-GTTATTCAGAGGAATTCACCCACACCACAGCGAGGGTCACAAGAG  Raphanus sativus var. oleiformis
FD533479       <-- ACTAAGTTATTCGGAGGAATTCACCCACACCACTGCGAGGGTCACAAGAG  Raphanus raphanistrum subsp. maritimus
EV570141       <-- ACTAAGTTATTCGGAGGAATTCACCCACACCACTGCGAGGGTCACAAGAG  Raphanus raphanistrum subsp. landra
FD532809       <-- ACTAAGTTATTCGGAGGAATTCACCCACACCACTGCGAGGGTCACAAGAG  Raphanus raphanistrum subsp. maritimus
EX758129       <-- ACTAGGTTATTCGGAGGAATTCACCCACACCACTGCGAGGGTCACAAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932388       <-- ACTA-GTTATTCAGAGGAATTCACCCACACCACAGCGAGGGTCACAAGAG  Raphanus sativus var. oleiformis
EX759561       --> ACTAAGTTATTCGGAGGAATTCACCCACACCACTGCGAGGGTCACAAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928525       --> ACTA-GTTATTCAGAGGAATTCACCCACACCACAGCGAGGGTCACAAGAG  Raphanus sativus var. oleiformis
EV574506       --> ACTAAGTTATTCGGAGGAATTCACCCACACCACTGCGAGGGTCACAAGAG  Raphanus raphanistrum subsp. landra
EX891426       --> ACTA-GTTATTCAGAGGAATTCACCCACACCACAGCGAGGGTCACAAGAG  Raphanus sativus var. oleiformis
FD529646       --> ACTAAGTTATTCGGAGGAATTCACCCACACCACTGCGAGGGTCACAAGAG  Raphanus raphanistrum subsp. maritimus
EY928126       --> ACTA-GTTATTCAGAGGAATTCACCCACACCACAGCGAGGGTCACAAGAG  Raphanus sativus var. oleiformis

               401    -    451
UN23356        --> AAGCATACACTGAAGTAGGCAGCTTATGCACCACTTTCCCAACACCTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755491       <-- AAGCATACACTGAAGTAGGCAGCTTATGCACCACTTTCCCAACACCTGGG
EX887231       <-- AAGCATACACTGAAGTAGGCAGCTTATGCACCACTTTCCCAACACCTGGG
FD533479       <-- AAGCATACACTGAAGTAGGCAGCTTATGCACCACTTTCCCAACACCTGGG
EV570141       <-- AAGCATACACTGAAGTAGGCAGCTTATGCACCACTTTCCCAACACCTGGG
FD532809       <-- AAGCATACACTGAAGTAGGCAGCTTATGCACCACTTTCCCAACACCTGGG
EX758129       <-- AAGCATACACTGAAGTAGGCAACTTATGCACCACTTTCCCAACACCTGGG
EY932388       <-- AAGCATACACTGAAGTAGGCAGCTTATGCACCACTTTCCCAACACCTGGG
EX759561       --> AAGCATACACTGAAGTAGGCAGCTTATGCACCACTTTCCCAACACCTGGG
EY928525       --> AAGCATACACTGAAGTAGGCAGCTTATGCACCACTTTCCCAACACCTGGG
EV574506       --> AAGCATACACTGAAGTAGGCAGCTTATGCACCACTTTCCCAACACCTGGG
EX891426       --> AAGCATACACTGAAGTAGGCAGCTTATGCACCACTTTCCCAACACCTGGG
FD529646       --> AAGCATACACTGAAGTAGGCAGCTTATGCACCACTTTCCCAACACCTGGG
EY928126       --> AAGCATACACTGAAGTAGGCAGCTTATGCACCACTTTCCCAACACCTGGG

               451    -    501
UN23356        --> ACACCTTCCGTGGCCTTCTTTGTAGCAATAGCCACGGTGGGAGCCACGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755491       <-- ACACCTTCCGTGGCCTTCTTTGTAGCAATAGCCACGGTGGGGGCCACGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887231       <-- ACACCTTCCGTGGCCTTCTTTGTAGCGATAGCCACAGTGGGAGCCACGAT  Raphanus sativus var. oleiformis
FD533479       <-- ACACCTTCCGTGGCCTTCTTTGTAGCAATAGCCACGGTGGGAGCCACGAT  Raphanus raphanistrum subsp. maritimus
EV570141       <-- ACACCTTCCGCGGCCTTCTTTGTAGCAATAGCCACGGTGGGAGCCACAAT  Raphanus raphanistrum subsp. landra
FD532809       <-- ACACCTTCCGTGGCCTTCTTTGTAGCAATAGCCACGGTGGGAGCCACGAT  Raphanus raphanistrum subsp. maritimus
EX758129       <-- ACACCTTCCGTGGCCTTCTTTGTAGCAATAGCCACGGTGGGGGCCACGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932388       <-- ACACCTTCCGTGGCCTTCTTTGTAGCGATAGCCACAGTGGGGGCCACGAT  Raphanus sativus var. oleiformis
EX759561       --> ACACCTTCCGTGGCCTTCTTTGTAGCAATAGCCACGGTGGGGGCCACGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928525       --> ACACCTTCCGTGGCCTTCTTTGTAGCGATAGCCACAGTGGGAGCCACGAT  Raphanus sativus var. oleiformis
EV574506       --> ACACCTTCCGCGGCCTTCTTTGTAGCAATAGCCACGGTGGGAGCCACAAT  Raphanus raphanistrum subsp. landra
EX891426       --> ACACCTTCCGTGGCCTTCTTTGTAGCGATAGCCACAGTGGGAGCCACGAT  Raphanus sativus var. oleiformis
FD529646       --> ACACCTTCCGTGGCCTTCTTTGTAGCAATAGCCACGGTGGGAGCCACGAT  Raphanus raphanistrum subsp. maritimus
EY928126       --> ACACCTTCCGTGGCCTTCTTTGTAGCGATAGCCACAGTGGGGGCCACGAT  Raphanus sativus var. oleiformis

               501    -    551
UN23356        --> CAACGATATGATCAAACCCTGACTCACAACCGCCAACGTGTCAGTCGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755491       <-- CAACGATA..........................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887231       <-- CAACGATATGATCAAACCCTGACTCACAACCGCCAACGTGTCGGTCGAAA  Raphanus sativus var. oleiformis
FD533479       <-- CAACGATATGATCAAACCCTGACTCACAACCGCTAATGTGTCAGTCGTGA  Raphanus raphanistrum subsp. maritimus
EV570141       <-- CAACGATATGATCAAACCCTGACTCACAACCGCAAATGTGTCAGTCGTGA  Raphanus raphanistrum subsp. landra
FD532809       <-- CAACGATATGATCAAGCCCTGACTCACAACCGCTAATGTGTCAGTCGTGA  Raphanus raphanistrum subsp. maritimus
EX758129       <-- CAACGATATGATCAAACCTTGACTCACAACCGCCAACGTGTCAGTCGTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932388       <-- CAACGATATGATCAAACCCTGACTCACAACCGCCAACGTGTCGGTCGAAA  Raphanus sativus var. oleiformis
EX759561       --> CAACGATATGATCAAACCTTGACTCACAACCGCCAACGTGTCAGTCGTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928525       --> CAACGATATGATCAAACCCTGACTCACAACCGCCAACGTGCCGGTCGAAA  Raphanus sativus var. oleiformis
EV574506       --> CAACGATATGATCAAACCCTGACTCACAACCGCAAATGTGTCAGTCGTGA  Raphanus raphanistrum subsp. landra
EX891426       --> CAACGATATGATCAAACCCTGACTCACAACCGCCAACGTGTCGGTCGAAA  Raphanus sativus var. oleiformis
FD529646       --> CAACGATATGATCAAACCCTGACTCACAACCGCTAATGTGTCAGTCGTGA  Raphanus raphanistrum subsp. maritimus
EY928126       --> CAACGATATGATCAAACCCTGACTCACAACCGCCAACGTGTCGGTCGAAA  Raphanus sativus var. oleiformis

               551    -    601
UN23356        --> GCAGCTCAATAAACTTCACAAACTCCTCCCGGTCAATTTCTCCATCCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755491       <-- ..................................................
EX887231       <-- GCAGCTCAATAAACTTCACAAACTCCTCCCGGTCAATTTCTCCATCCAAG
FD533479       <-- GCAGCTCAATAAACTTCACAAACTCCTCCCGGTCAATTTCTCCATCCAAG
EV570141       <-- GCAGCTCAATAAACTTCACAAACTCCTCCCGGTCAATTTCTCCATCCAAG
FD532809       <-- GCAGCTCAATAAACTTCACAAACTCCTCCCGGTCAATTTCTCCATCCAAG
EX758129       <-- GCAGTTCGATAAACTTCACAAACTCCTCCCGGTCAATTTCTCCATCCAAG
EY932388       <-- GCAGCTCAATAAACTTCACAAACTCCTCCCGGTCAATTTCTCCATCCAAG
EX759561       --> GCAGTTCGATAAACTTCACAAACTCCTCCCGGTCAATTTCTCCATCCAAG
EY928525       --> GCAGCTCAATAAACTTCACAAACTCATCCCGGTCAATTTCTCCATCCAAG
EV574506       --> GCAGCTCAATAAACTTCACAAACTCCTCCCGGTCAATTTCTCCATCCAAG
EX891426       --> GCAGCTCAATAAACTTCACAAACTCCTCCCGGTCAATTTCTCCATCCAAG
FD529646       --> GCAGCTCAATAAACTTCACAAACTCCTCCCGGTCAATTTCTCCATCCAAG
EY928126       --> GCAGCTCAATAAACTTCACAAACTCCTCCCGGTCAATTTCTCCATCCAAG

               601    -    651
UN23356        --> TTCATATCACACTCCGTCATAATGCTCCGGACAAGATCCTTAGAAGGCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755491       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887231       <-- TTCATATCACACTCCGTCATAATGCTCCGGACAAGATCCTTAGAAGGCGG  Raphanus sativus var. oleiformis
FD533479       <-- TTCATATCACACTCCGTCATAATGCTTCGGACAAGATCCTTAGAAGGCGG  Raphanus raphanistrum subsp. maritimus
EV570141       <-- TTCATATCACACTCCGTCATAATGCTTCGGACAAGATCCTTAGAAGGCGG  Raphanus raphanistrum subsp. landra
FD532809       <-- TTCATATCACACTCCGTCATAATGCTTCGGACAAGATCCTTAGAAGGCGG  Raphanus raphanistrum subsp. maritimus
EX758129       <-- TTCATATCACACTCCGTCATAATGCTCCGGACAAGATCCTTAGAAGGCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932388       <-- TTCATATCACACTCCGTCATAATGCTCCGGACAAGATCCTTAGAAGGCGG  Raphanus sativus var. oleiformis
EX759561       --> TTCATATCACACTCCGTCATAATGCTCCGGACAAGATCCTTAGAAGGCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928525       --> TTCATATCACACTCCGTCATAATGCTCCGGACAAGATCCTTAGAAGGCGG  Raphanus sativus var. oleiformis
EV574506       --> TTCATATCACACTCCGTCATAATGCTTCGGACAAGATCCTTAGAAGGCGG  Raphanus raphanistrum subsp. landra
EX891426       --> TTCATATCACACTCCGTCATAATGCTCCGGACAAGATCCTTAGAAGGCGG  Raphanus sativus var. oleiformis
FD529646       --> TTCATATCACACTCCGTCATAATGCTTCGGACAAGATCCTTAAAAGGCGG  Raphanus raphanistrum subsp. maritimus
EY928126       --> TTCATATCACACTCCGTCATAATGCTCCGGACAAGATCCTTAGAAGGCGG  Raphanus sativus var. oleiformis

               651    -    701
UN23356        --> ATCGAAATGAGGACCAGGCAATCGCTTGTTTATGTCATTGTAGACGAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755491       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887231       <-- ATCGAAATGAGGACCAGGCAATCGCTTGTTTATGTCATTGTAGACCAGAA  Raphanus sativus var. oleiformis
FD533479       <-- ATCGAAATGAGGACCAGGCAATCGCTTGTTTATGTCATTGTAGACGAGAA  Raphanus raphanistrum subsp. maritimus
EV570141       <-- ATCGAAATGAGGACCAGGCAATCGCTTGTTTATGTCATTGTAGACGAGAA  Raphanus raphanistrum subsp. landra
FD532809       <-- ATCGAAATGAGGACCAGGCAATCGCTTGTTTATGTCATTGTAGACGAGAA  Raphanus raphanistrum subsp. maritimus
EX758129       <-- ATCGAAATGAGGACCGGGCAATCGCTTGTTTATGTCATTGTAGACGAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932388       <-- ATCGAAATGAGGACCAGGCAATCGCTTGTTTATGTCATTGTAGACCAGAA  Raphanus sativus var. oleiformis
EX759561       --> ATCGAAATGAGGACCGGGCAATCGCTTGTTTATGTCATTGTAGACGAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928525       --> ATCGAAATGAGGACCAGGCAATCGCTTGTTTATGTCATTGTAGACCAGAA  Raphanus sativus var. oleiformis
EV574506       --> ATCGAAATGAGGACCAGGCAATCGCTTGTTTATGTCATTGTAGACGAGAA  Raphanus raphanistrum subsp. landra
EX891426       --> ATCGAAATGAGGACCAGGCAATCGCTTGTTTATGTCATTGTAGACCAGAA  Raphanus sativus var. oleiformis
FD529646       --> ATCGAAATGAGGACCAGGCAATCGCTTGTTTATGTCATTGTAGACGAGAA  Raphanus raphanistrum subsp. maritimus
EY928126       --> ATCGAAATGAGGACCAGGCAATCGCTTGTTTATGTCATTGTAGACCAGAA  Raphanus sativus var. oleiformis

               701    -    751
UN23356        --> GCACGGCGATGTATAGCTCTTCAAAACTAAGATTGGCTCTTCCGGTTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755491       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887231       <-- GCACGGCGATGTATAGCTCTTCAAAACTAAGATTGGCTCTTCCGGTTTCA  Raphanus sativus var. oleiformis
FD533479       <-- GCACGGCAATGTATAGCTCTTCAAAACTAAGATTGGCTCTTCCGGTTTCA  Raphanus raphanistrum subsp. maritimus
EV570141       <-- GCACGGCAATGTATAGCTCTTCAAAACTAAGATTGGCTCTTCCGGTTTCA  Raphanus raphanistrum subsp. landra
FD532809       <-- GCACGGCAATGTATAGCTCTTCAAAACTAAGATTGGCTCTTCCGGTTTCA  Raphanus raphanistrum subsp. maritimus
EX758129       <-- GCACGGCGATGTATAGCTCTTCAAAACTAAGATTGGCTCTTCCGGTTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932388       <-- GCACGGCGATGTATAGCTCTTCAAAACTAAGATTGGCTCTTCCGGTTTCA  Raphanus sativus var. oleiformis
EX759561       --> GCACGGCGATGTATAGCTCTTCAAActa......................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928525       --> GCACGGCGATGTATAGCTCTTCAAAACTAAGATTGGCTCTTCCGGTTTCA  Raphanus sativus var. oleiformis
EV574506       --> GCACGGCAATGTATAGCTCTTCAAAACTAAGATTGGCTCTTCCGGTTTCA  Raphanus raphanistrum subsp. landra
EX891426       --> GCACGGCGATGTATAGCTCTTCAAAACTAAGATTGGCTCTTCCGGTTTCA  Raphanus sativus var. oleiformis
FD529646       --> GCACGGCAATGTATAGCTCTTCAAAACTAAGATTGGCTCTTCCGGTTTCA  Raphanus raphanistrum subsp. maritimus
EY928126       --> GCACGGCGATGTATAGCTCTTCAAAACTAAGATTGGCTCTTCCGGTTTCA  Raphanus sativus var. oleiformis

               751    -    801
UN23356        --> AGCTTGAACCGATCGAAAACCCGATCACATATCGCCTGTACCTGTTTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755491       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887231       <-- AGCTTGAACCGATCGAAAACACGATCACATATCGCCTGTACCTGTTTTTG  Raphanus sativus var. oleiformis
FD533479       <-- AGCTTGAACCGATCGAAAACCCGATCACATATCGCCTGTACCTGTTTTTG  Raphanus raphanistrum subsp. maritimus
EV570141       <-- AGCTTGAACCGATCGAAAACCCGATCACATATCGCCTGTACCTGTTTTTG  Raphanus raphanistrum subsp. landra
FD532809       <-- AGCTTGAACCGATCGAAAACCCGATCACATATCGCCTGTACCTGTTTTTG  Raphanus raphanistrum subsp. maritimus
EX758129       <-- AGCTTGAACCGATCGAAAACCCGATCACATATCGCCTGTACCTGTTTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932388       <-- AGCTTGAACCGATCGAAAACACGATCACATATCGCCTGTACCTGTTTTTG  Raphanus sativus var. oleiformis
EX759561       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928525       --> AGCTTGAACCGATCGAAAACACGATCACATATCGCCTGTACCTGTTTTTG  Raphanus sativus var. oleiformis
EV574506       --> AGCTTGAACCGATCGAAAACCCGATCACATATCGCCTGTACCTGTTTTTG  Raphanus raphanistrum subsp. landra
EX891426       --> AGCTTGAACCGATCGAAAACACGATCACATATCGCCTGTACCTGTTTTTG  Raphanus sativus var. oleiformis
FD529646       --> AGCTTGAACCGATCGAAAACCCGATCACATATCGCCTGTACCTGTTTTTG  Raphanus raphanistrum subsp. maritimus
EY928126       --> AGCTTGAACCGATCGAAAACACGATCACATATCGCCTGTACCTGTTTTTG  Raphanus sativus var. oleiformis

               801    -    851
UN23356        --> CCTCCACTGCTTGCCTCGGAGCTTGTCGAAGACTTGTCCCATGGCGATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755491       <-- ..................................................
EX887231       <-- CCTCCACTGCTTGCCTCGGAGCTTGTCGAAGACTTGTCCCAT........
FD533479       <-- CCTCCACTGCTTGCCTCGGAGCTTGTCGAAGACTTGTCCCATGGCGATGA
EV570141       <-- CCTCCACTGCTTGCCTCGGAGCTTGTCGAAGACTTGTCCCATGGCGATGA
FD532809       <-- CCTCCACTGCTTGCCTCGGAGCTTGTCGAAGACTTGTCCCATGGCGATGA
EX758129       <-- CCTCCACTGCTTGCCTCGGAGCTTGTCGAAGACTTGTCCCATGGCGATGA
EY932388       <-- CCTCCACTGCTTGCCTCGGAGCTTGTCGAAGACTTGTCCCATGGCGATGA
EX759561       --> ..................................................
EY928525       --> CCTCCACTGCTTGCCTCGGAGCTTGTCGAAGACTTGTCCCATGGCGATGA
EV574506       --> CCTCCACTGCTTGCCTCGGAGCTTGTCGAAGACTTGTCCCATGGCGATGA
EX891426       --> CCTCCACTGCTTGCCTCGGAGCTTGTCGAAGACTTGTCCCATGGCGATGA
FD529646       --> CCTCCACTGCTTGCCTCGGAGCTTGTCGAAGACTTGTCCCATGGCGATGA
EY928126       --> CCTCCACTGCTTGCCTCGGAGCTTGTCGAAGACTTGTCCCATGGCGATGA

               851    -    901
UN23356        --> GTTTCTTCTTGTCTGATGTGCAAATCTGATTTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX755491       <-- ...................................
EX887231       <-- ...................................
FD533479       <-- GTTTCTTCTTGTCTGATGTGCAAATCTGATTTCC.
EV570141       <-- GTTTCTTCTTGTCTG....................
FD532809       <-- GTTTCTTCTTGTCTG....................
EX758129       <-- GTTTCTTCTTGTCTGATGTGCcc............
EY932388       <-- GTTTCTTCTTGTCTGATGTGCAAATCTGATTTCC.
EX759561       --> ...................................
EY928525       --> ...................................
EV574506       --> GTTT...............................
EX891426       --> GTTTCTTCTTGTCTGATGTGCccc...........
FD529646       --> GTTTCTTCTTGTCTGATGTGCAAATCTGATTTCCC
EY928126       --> GTTTCTTCTTGTCTGATGTGCAAATCTGATTTCC.