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Alignment for radish unigene UN23361

               1      -     51
UN23361        --> GTAACACATTTCCTCTTTCCTTTTCTCCACCAAATAGGCAAATGCTAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- GTAACACATTTCCTCTTTCCTTTTCTCCACCAAATAGGCAAATGCTAAAT
FD983459       <-- ..................................................
EY918855       <-- ..................................................
EX777128       <-- ..................................................
EY901852       <-- ..................................................
FD538563       <-- ..................................................
EX899215       <-- ..................................................
EX751622       <-- ..................................................
FD974886       <-- ..................................................
EV540740       --> GTAACACATTTCCTCTTTCCTTTTCTCCACCAAATAGGCAAATGCTAAAT
EX747416       --> ..................................................
FD542504       --> ..................................................
EX894977       --> ..................................................
FD580459       --> ..................................................
FD954117       --> ..................................................
FD954973       --> ..................................................
EY923003       --> ..................................................
EY905408       --> ..................................................
FD536520       --> ..................................................
FD978699       --> ..................................................
FD987396       --> ..................................................
EX773324       --> ..................................................
EW724789       --> ..................................................
EX905289       --> ..................................................
FY453459       --> ..................................................
FD542474       --> ..................................................

               51     -    101
UN23361        --> TGTTAATTTATTGGAGCCTAAATGGAAGCCTAAAGGAAAATACCAAAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- TGTTAATTTATTGGAGC-TAAATGGAAGCCTAAAGGAAAATACCAAAGGC
FD983459       <-- ..................................................
EY918855       <-- ..................................................
EX777128       <-- ..................................................
EY901852       <-- ..................................................
FD538563       <-- ..................................................
EX899215       <-- ..................................................
EX751622       <-- ..................................................
FD974886       <-- ..................................................
EV540740       --> TGTTAATTTATTGGAGCCTAAATGGAAGCCTAAAGGAAAATACCAAAGGC
EX747416       --> ..................................................
FD542504       --> ..................................................
EX894977       --> ..................................................
FD580459       --> ..................................................
FD954117       --> ..................................................
FD954973       --> ..................................................
EY923003       --> ..................................................
EY905408       --> ..................................................
FD536520       --> ..................................................
FD978699       --> ..................................................
FD987396       --> ..................................................
EX773324       --> ..................................................
EW724789       --> ..................................................
EX905289       --> ..................................................
FY453459       --> ..................................................
FD542474       --> ..................................................

               101    -    151
UN23361        --> CAACAAAGAAAAAAGGAAATTAAAAGGGCCCAAAACTCAAATCTTTCGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- CAACAAAGAAAAAAGGAAATTAAAAGGGCCCAAAACTCAAATCTTTCGGC
FD983459       <-- ..................................................
EY918855       <-- ..................................................
EX777128       <-- ..................................................
EY901852       <-- ..................................................
FD538563       <-- ..................................................
EX899215       <-- ..................................................
EX751622       <-- ..................................................
FD974886       <-- ..................................................
EV540740       --> CAACAAAGAAAAAAGGAAATTAAAAGGGCCCAAAACTCAAATCTTTCGGC
EX747416       --> ..................................................
FD542504       --> ..................................................
EX894977       --> ..................................................
FD580459       --> ..................................................
FD954117       --> ..................................................
FD954973       --> ..................................................
EY923003       --> ..................................................
EY905408       --> ..................................................
FD536520       --> ..................................................
FD978699       --> ..................................................
FD987396       --> ..................................................
EX773324       --> ..................................................
EW724789       --> ..................................................
EX905289       --> ..................................................
FY453459       --> ..................................................
FD542474       --> ..................................................

               151    -    201
UN23361        --> CTTTTTAAAGGGACCACCCAGAGATAAAATTTATTTTATTTGTTAGCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- CTTTTTAAAGGGACCACCCAGAGATAAAATTTATTTTATTTGTTAGCAAT
FD983459       <-- ..................................................
EY918855       <-- ..................................................
EX777128       <-- ..................................................
EY901852       <-- ..................................................
FD538563       <-- ..................................................
EX899215       <-- ..................................................
EX751622       <-- ..................................................
FD974886       <-- ..................................................
EV540740       --> CTTTTTAAAGGGACCACCCAGAGATAAAATTTATTTTATTTGTTAGCAAT
EX747416       --> ..............................ggATTTTATTTGTTAGCAAT
FD542504       --> ..............................ggATTTTATTTGTTAGCAAC
EX894977       --> ........................ggattattaaatttgttagTAGCAAT
FD580459       --> ........................ggattattaaatttgttagTAGCAAT
FD954117       --> ........................ggattattaaatttgttagTAGCAAT
FD954973       --> ...........................ggattaaatttgttagTAGCAAT
EY923003       --> ..................................................
EY905408       --> ..................................................
FD536520       --> ..................................................
FD978699       --> ..................................................
FD987396       --> ..................................................
EX773324       --> ..................................................
EW724789       --> ..................................................
EX905289       --> ..................................................
FY453459       --> ..................................................
FD542474       --> ..................................................

               201    -    251
UN23361        --> C--TCTTTTCTTTCTCTCTACTCCAAGAACTCATCCCACAGATCTCTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- C--TCTTTTCTTTCTCTCTACTCCAAGAACTCATCCCACAGATCTCTCTC
FD983459       <-- ..................................................
EY918855       <-- ..................................................
EX777128       <-- ..................................................
EY901852       <-- ..................................................
FD538563       <-- ..................................................
EX899215       <-- ..................................................
EX751622       <-- ..................................................
FD974886       <-- ..................................................
EV540740       --> C--TCTTTTCTTTCTCTCTACTCCAAGAACTCATCCCACAGATCTCTCTC
EX747416       --> C--TCTTTTCTTTCTCTCTACTCCAAGAACTCATCCCACAGATCTCTCTC
FD542504       --> CGATCTTTTCTTTCTCTCTACTCCAAGAACTCATCCCACAGATCTCTCTC
EX894977       --> CAATCTTGTCTTCCTCTCTACTCCAAGAACTCATCCCACAGATCTCTCTC
FD580459       --> CAATCTTGTCTTCCTCTCTACTCCAAGAACTCATCCCACAGATCTCTCTC
FD954117       --> CAATCTTGTCTTCCTCTCTACTCCAAGAACTCATCCCACAGATCTCTCTC
FD954973       --> CAATCTTGTCTTCCTCTCTACTCCAAGAACCCATCCCACAGATCTCTCTC
EY923003       --> ...............ggCTACTCCAAGAACTCATCCCACAGATCTCTCTC
EY905408       --> .................ggACTCCAAGAACTCATCCCACAGATCTCTCTC
FD536520       --> .................ggACTCCAAGAACTCATCCCACAGATCTCTCTC
FD978699       --> .................ggACTCCAAGAACTCATCC-ACAGATCTCTCTC
FD987396       --> .................ggACTCCAAGAACTCATCCCACAGATCTCTCTC
EX773324       --> .............................CTCATCC-ACAGATCTCTCTC
EW724789       --> ....................................gACAGATCTCTCTC
EX905289       --> ..................................................
FY453459       --> ..................................................
FD542474       --> ..................................................

               251    -    301
UN23361        --> CGACAATGGCTGCAGCGATGGTTCTCGACCCCAAATCATCATCTCCCCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- CGACAATGGCCGCAGCGATGGTTCTCGACCCCAAATCATCATCTCCCCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD983459       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY918855       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX777128       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY901852       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538563       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899215       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX751622       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD974886       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540740       --> CGACAATGGCCGCAGCGATGGTTCTCGACCCCAAATCATCATCTCCCCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX747416       --> TGACAATGGCTGCAGCGATGGTTCTCGACCCCAAATCATCATCTCCCCCA  Raphanus raphanistrum subsp. maritimus
FD542504       --> CGACAATGGCCGCAGCGATGGTTCTCGACCCCAAATCATCATCTCCCCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894977       --> CGACAATGGCTGCAGCGATGGTTCTCGACCCCAAATCATCATCTCCCCCA  Raphanus sativus cv Early Scarlet Globe
FD580459       --> CGACAATGGCTGCAGCGATGGTTCTCGACCCCAAATCATCATCTCCCCCA  Raphanus sativus cv Rat-Tail Radish #3870
FD954117       --> CGACAATGGCTGCAGCGATGGTTCTCGACCCCAAATCATCGTCTCCCCCA  Raphanus sativus cv Rat-Tail Radish #3870
FD954973       --> CGACAATGGCTGCAGCGATGGTTCTCGACCCCAAATCATCATCTCCCCCA  Raphanus sativus cv Rat-Tail Radish #3870
EY923003       --> CGACAATGGCTGCAGCGATGGTTCTCGACCCCAAATCATCATCTCCCCCA  Raphanus raphanistrum subsp. landra
EY905408       --> CGACAATGGCCGCAGCGATGGTTCTCGACCCCAAATCATCATCTCCCCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536520       --> CGACAATGGCTGCAGCGATGGTTCTCGACCCCAAATCATCATCTCCCCCA  Raphanus raphanistrum subsp. maritimus
FD978699       --> CGACAATGGCTGCAGCGATGGTTCTCGACCCCAAATCATCATCTCCCCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987396       --> CGACAATGGCTGCAGCGATGGTTCTCGACCCCAAATCATCATCTCCCCCA  Raphanus raphanistrum subsp. landra
EX773324       --> CGACAATGGCTGCAGCGATGGTTCTCGACCCCAAATCATCATCTCCCCCA  Raphanus raphanistrum subsp. landra
EW724789       --> CGACAATGGCTGCAGCGATGGTTCTCGACCCCAAATCATCATCTCCCCCA  Raphanus sativus cv Early Scarlet Globe
EX905289       --> ..ggAATGGCTGCAGCGATGGTTCTCGACCCCAAATCATCATCTCCCCCA  Raphanus sativus cv Rat-Tail Radish #3870
FY453459       --> ......TGGCTGCAGCGATGGTTCTCGACCCCAAATCATCATCTCCCCCA  Raphanus sativus cv GSK3-1
FD542474       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               301    -    351
UN23361        --> CTGATGGATCTCTCCACGTCCCCCGACGAGGAAGATCCCTACTCCCGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- CTGATGGATCTCTCCACGTCCCCCGACGAGGAAGATCCCTACTCCCGTCT
FD983459       <-- ..................................................
EY918855       <-- ..................................................
EX777128       <-- ..................................................
EY901852       <-- ..................................................
FD538563       <-- ..................................................
EX899215       <-- ..................................................
EX751622       <-- ..................................................
FD974886       <-- ..................................................
EV540740       --> CTGATGGATCTCTCCACGTCCCCCGACGAGGAAGATCCCTACTCCCGTCT
EX747416       --> CTGATGGATCTCTCCACGTCCCCCGACGAGGAAGATCCCTACTCCCGTCT
FD542504       --> CTGATGGATCTCTCCACGTCCCCCGACGAGGAAGATCCCTACTCCCGTCT
EX894977       --> CTGATGGATCTCTCCACGTCCCCCGACGAGGAAGATCCCTACTCCCGTCT
FD580459       --> CTGATGGATCTCTCCACGTCCCCCGACGAGGAAGATCCCTACTCCCGTCT
FD954117       --> CTGATGGATCTCTCCACGTCCCCCGACGAGGAAGATCCCTACTCCCGTCT
FD954973       --> CTGATGGATCTCTCCACGTCCCCCGACGAGGAAGATCCCTACTCCCGTCT
EY923003       --> CTGATGGATCTCTCCACGTCCCCCGACGAGGAAGATCCCTACTCCCGTCT
EY905408       --> CTGATGGATCTTTCCACGTCCCCCGACGAGGAAGATCCCTACTCCCGTCT
FD536520       --> CTGATGGATCTCTCCACGTCCCCCGACGAGGAAGATCCCTACTCCCGTCT
FD978699       --> CTGATGGATCTCTCCACGTCCCCCGACGAGGAAGATCCCTACTCCCGTCT
FD987396       --> CTGATGGATCTCTCCACGTCCCCCGACGAGGAAGATCCCTACTCCCGTCT
EX773324       --> CTGATGGATCTCTCCACGTCCCCCGACGAGGAAGATCCCTACTCCCGTCT
EW724789       --> CTGATGGATCTCTCCACGTCCCCCGACGAGGAAGATCCCTACTCCCGTCT
EX905289       --> CTGATGGATCTCTCCACGTCCCCCGACGAGGAAGATCCCTACTCCCGTCT
FY453459       --> CTGATGGATCTCTCCACGTCCCCCGACGAGGAAGATCCCTACTCCCGTCT
FD542474       --> ..................................................

               351    -    401
UN23361        --> CAAATCGCTCGAGCGGCAGCTGGAGTTCACCGACATCCAAGAGGAATACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- CAAATCGCTCGAGCGGCAGCTAGAGTTCACCGACATCCAAGAGGAATACG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD983459       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY918855       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX777128       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY901852       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538563       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899215       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX751622       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD974886       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540740       --> CAAATCGCTCGAGCGGCAGCTAGAGTTCACCGACATCCAAGAGGAATACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX747416       --> CAAATCGCTCGAGCGCCAGCTGGAGTTCACCGACATCCAAGAGGAATACG  Raphanus raphanistrum subsp. maritimus
FD542504       --> CAAATCTCTCGAGCGGCAGCTGGAGTTCACCGACATCCAAGAGGAATACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894977       --> CAAATCGCTCGAGCGGCAGCTGGAGTTCACCGACATCCAAGAGGAATACG  Raphanus sativus cv Early Scarlet Globe
FD580459       --> CAAATCGCTCGAGCGGCAGCTGGAGTTCACCGACATCCAAGAGGAATACG  Raphanus sativus cv Rat-Tail Radish #3870
FD954117       --> CAAATCGCTCGAGCGGCAGCTGGAGTTCACCGACATCCAAGAGGAATACG  Raphanus sativus cv Rat-Tail Radish #3870
FD954973       --> CAAATCGCTCGAGCGGCAGCTGGAGTTCACCGACATCCAAGAGGAATACG  Raphanus sativus cv Rat-Tail Radish #3870
EY923003       --> CAAATCGCTCGAGCGCCAGCTGGAGTTCACCGACATCCAAGAGGAATACG  Raphanus raphanistrum subsp. landra
EY905408       --> CAAATCGCTCGAGCGGCAGCTAGAGTTCACCGACATCCAAGAGGAATACG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536520       --> CAAATCGCTCGAGCGCCAGCTGGAGTTCACCGACATCCAAGAGGAATACG  Raphanus raphanistrum subsp. maritimus
FD978699       --> CAAATCGCTTGAGCGCCAGCTGGAGTTCACCGACATCCAAGAGGAATACG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987396       --> CAAATCGCTCGAGCGCCAGCTGGAGTTCACCGACATCCAAGAGGAATACG  Raphanus raphanistrum subsp. landra
EX773324       --> CAAATCGCTCGAGCGCCAGCTGGAGTTCACCGACATCCAAGAGGAATACG  Raphanus raphanistrum subsp. landra
EW724789       --> CAAATCGCTCGAGCGGCAGCTGGAGTTCACCGACATCCAAGAGGAATACG  Raphanus sativus cv Early Scarlet Globe
EX905289       --> CAAATCGCTCGAGCGGCAGCTGGAGTTCACCGACATCCAAGAGGAATACG  Raphanus sativus cv Rat-Tail Radish #3870
FY453459       --> CAAATCGCTCGAGCGGCAGCTGGAGTTCACCGACATCCAAGAGGAATACG  Raphanus sativus cv GSK3-1
FD542474       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               401    -    451
UN23361        --> TGAAAGACGAGCAGAAGAATCTCAAACGCGAGCTCTTGCGCGCTCAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- TGAAAGACGAGCAGAAGAATCTCAAGCGCGAGCTCTTGCGCGCTCAAGAA
FD983459       <-- ..................................................
EY918855       <-- ..................................................
EX777128       <-- ..................................................
EY901852       <-- ..................................................
FD538563       <-- ..................................................
EX899215       <-- ..................................................
EX751622       <-- ..................................................
FD974886       <-- ..................................................
EV540740       --> TGAAAGACGAGCAGAAGAATCTCAAGCGCGAGCTCTTGCGCGCTCAAGAA
EX747416       --> TGAAAGACGAGCAGAAGAATCTCAAACGCGAGCTCTTGCGCGCTCAAGAA
FD542504       --> TGAAAGACGAGCAGAAGAATCTCAAACGCGAGCTCTTGCGCGCTCAAGAA
EX894977       --> TGAAAGACGAGCAGAAGAATCTCAAACGCGAGCTCTTGCGCGCTCAAGAG
FD580459       --> TGAAAGACGAGCAGAAGAATCTCAAACGCGAGCTCTTGCGCGCTCAAGAA
FD954117       --> TGAAAGACGAGCAGAAGAATCTCAAACGCGAGCTCTTGCGCGCTCAAGAA
FD954973       --> TGAAAGACGAGCAGAAGAATCTCAAACGCGAGCTCTTGCGCGCTCAAGAA
EY923003       --> TGAAAGACGAGCAGAAGAATCTCAAACGCGAGCTCTTGCGCGCTCAAGAA
EY905408       --> TGAAAGACGAGCAGAAGAATCTCAAGCGCGAGCTCTTGCGCGCTCAAGAA
FD536520       --> TGAAAGACGAGCAGAAGAATCTCAAACGCGAGCTCTTGCGCGCTCAAGAA
FD978699       --> TGAAAGACGAGCAGAAGAATCTCAAACGCGAGCTCTTACGCGCTCAAGAA
FD987396       --> TGAAATACGAGCAGAAGAATCTCAAACGCGAGCTCTTGCGCGCTCAAGAA
EX773324       --> TGAAAGACGAACAGAAGAATCTCAAACGCGAGCTCTTGCGCGCTCAAGAA
EW724789       --> TGAAAGACGAGCAGAAGAATCTCAAACGCGAGCTCTTGCGCGCTCAAGAA
EX905289       --> TGAAAGACGAGCAGAAGAATCTCAAACGCGAGCTCTTGCGCGCTCAAGAA
FY453459       --> TGAAAGACGAGCAGAAGAATCTCAAACGCGAGCTCTTGCGCGCTCAAGAA
FD542474       --> ..................................................

               451    -    501
UN23361        --> GAGGTCAAGCGAATCCAATCCGTGCCCTTAGTGATTGGCCAGTTCATGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- GAGGTCGA-CGAATCCAATCCGTGCCCTTAGTGATTGGCCAGTTCATGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD983459       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY918855       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX777128       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY901852       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538563       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899215       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX751622       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD974886       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540740       --> GAGGTCGA-CGAATCCAATCCGTGCCCTTAGTGATTGGCCAGTTCATGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX747416       --> GAGGTCAAGCGAATCCAATCCGTGCCCTTAGTGATAGGCCAGTTCATGGA  Raphanus raphanistrum subsp. maritimus
FD542504       --> GAGGTCAAACGAATCCAATCCGTGCCCTTAGTGATTGGCCAGTTCATGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894977       --> GAGGTCAAGCGAATCCAATCCGTGCCCTTAGTGATTGGCCAGTTCATGGA  Raphanus sativus cv Early Scarlet Globe
FD580459       --> GAGGTCAAGCGAATCCAATCCGTGCCCTTAGTGATTGGCCAGTTCATGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD954117       --> GAGGTCAAGCGAATCCAATCCGTGCCCTTAGTGATTGGCCAGTTCATGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD954973       --> GAGGTCAAGCGAATCCAATCCGTGCCCTTAGTGATTGGCCAGTTCATGGA  Raphanus sativus cv Rat-Tail Radish #3870
EY923003       --> GAGGTCAAGCGAATCCAATCCGTGCCCTTAGTGATAGGCCAGTTCATGGA  Raphanus raphanistrum subsp. landra
EY905408       --> GAGGTCAAACGAATCCAATCCGTGCCCTTAGTGATTGGCCAGTTCATGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536520       --> GAGGTCAAGCGAATCCAATCCGTGCCCTTAGTGATAGGCCAGTTCATGGA  Raphanus raphanistrum subsp. maritimus
FD978699       --> GAGGTCAAGCGAATCCAATCCGTGCCCTTAGTGATAGGCCAGTTCATGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987396       --> GAGGTCAAGCGAATCCAATCCGTGCCCTTAGTGATAGGCCAGTTCATGGA  Raphanus raphanistrum subsp. landra
EX773324       --> GAGGTCAAGCGAATCCAATCCGTGCCCTTAGTGATTGGCCAGTTCATGGA  Raphanus raphanistrum subsp. landra
EW724789       --> GAAGTCAAGCGAATCCAATCCGTGCCCTTAGTGATTGGCCAGTTCATGGA  Raphanus sativus cv Early Scarlet Globe
EX905289       --> GAGGTCAAGCGAATCCAATCCGTGCCCTTAGTGATTGGCCAGTTCATGGA  Raphanus sativus cv Rat-Tail Radish #3870
FY453459       --> GAGGTCAAGCGAATCCAATCCGTGCCCTTAGTGATTGGCCAGTTCATGGA  Raphanus sativus cv GSK3-1
FD542474       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               501    -    551
UN23361        --> GATGGTCGATCAGAACAACGGCATCGTTGGATCCACCACGGGCTCCAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- GATGGTCGATCAGAACAACGGCATCGTTGGATCCACCACGGGCTCCAATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD983459       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY918855       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX777128       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY901852       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538563       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899215       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX751622       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD974886       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540740       --> GATGGTCGATCAGAACAACGGCATCGTTGGATCCACCACGGGCTCCAATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX747416       --> GATGGTCGATCAGAACAACGGCATCGTTGGATCCACCACGGGCTCCAATT  Raphanus raphanistrum subsp. maritimus
FD542504       --> GATGGTCGATCAGAACAACGGCATCGTTGGATCCACCACTGGGTCCAATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894977       --> GATGGTTGATCAGAACAACGGCATCGTTGGATCCACCACCGGGTCCAATT  Raphanus sativus cv Early Scarlet Globe
FD580459       --> GATGGTTGATCAGAACAACGGCATCGTTGGATCCACCACCGGGTCCAATT  Raphanus sativus cv Rat-Tail Radish #3870
FD954117       --> GATGGTTGATCAGAACAACGGCATCGTTGGATCCACCACCGGGTCCAATT  Raphanus sativus cv Rat-Tail Radish #3870
FD954973       --> GATGGTTGATCAGAACAACGGCACCGTTGGATCCACCACCGGGTCCAATT  Raphanus sativus cv Rat-Tail Radish #3870
EY923003       --> GATGGTCGATCAGAACAACGGCATCGTTGGATCCACCACGGGCTCCAATT  Raphanus raphanistrum subsp. landra
EY905408       --> GATGGTCGATCAGAACAACGGCATCGTTGGATCCACCACGGGCTCCAATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536520       --> GATGGTCGATCAGAACAACGGCATCGTTGGATCCACCACGGGCTCCAATT  Raphanus raphanistrum subsp. maritimus
FD978699       --> GATGGTCGATCAGAACAACGGCATCGTTGGATCCACCACGGGCTCCAATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987396       --> GATGGTCGATCAGAACAACGGCATCGTTGGATCCACCACGGGCTCCAATT  Raphanus raphanistrum subsp. landra
EX773324       --> GATGGTCGATCAGAACAACGGCATCGTTGGATCCACCACGGGCTCCAATT  Raphanus raphanistrum subsp. landra
EW724789       --> GATGGTTGATCAGAACAACGGCATCGTTGGATCCACCACCGGGTCCAATT  Raphanus sativus cv Early Scarlet Globe
EX905289       --> GATGGTTGATCAGAACAACGGCATCGTTGGATCCACCACCGGGTCCAATT  Raphanus sativus cv Rat-Tail Radish #3870
FY453459       --> GATGGTTGATCAGAACAACGGCATCGTTGGATCCACCACCGGGTCCAATT  Raphanus sativus cv GSK3-1
FD542474       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               551    -    601
UN23361        --> ACTATGTCCGGATTCTCAGCACCATCAACAGAGAAGACCTGAAGCCTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- ACTATGTCAGGATTCTCAGCACCATCAACAGAGAAGACTTAAAGCCTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD983459       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY918855       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX777128       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY901852       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538563       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899215       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX751622       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD974886       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540740       --> ACTATGTCAGGATTCTCAGCACCATCAACAGAGAAGACTTAAAGCCTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX747416       --> ACTATGTTCGGATTCTCAGCACCATCAACAGAGAAGACTTAAAGCCTTCT  Raphanus raphanistrum subsp. maritimus
FD542504       --> ACTATGTCAGGATTCTCAGCACCATCAACAGAGAAGACCTGAAGCCTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894977       --> ACTATGTCCGGATTCTCAGCACCATCAACAGAGAAGACCTGAAGCCTTCT  Raphanus sativus cv Early Scarlet Globe
FD580459       --> ACTATGTCCGGATTCTCAGCACCATCAACAGAGAAGACCTGAAGCCTTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD954117       --> ACTATGTCCGGATTCTCAGCACCATCAACAGAGAAGACCTGAAGCCTTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD954973       --> ACTATGTCCGGATTCTCAGCACCATCAACAGGGAAGACCTGAAGCCTTCT  Raphanus sativus cv Rat-Tail Radish #3870
EY923003       --> ACTATGTTCGGATTCTCAGCACCATCAACAGAGAAGACTTAAAGCCTTCT  Raphanus raphanistrum subsp. landra
EY905408       --> ACTATGTCAGGATTCTCAGCACCATCAACAGAGAAGACTTAAAGCCTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536520       --> ACTATGTTCGGATTCTCAGCACCATCAACAGAGAAGACTTAAAGCCTTCT  Raphanus raphanistrum subsp. maritimus
FD978699       --> ACTATGTTCGGATTCTCAGCACCATCAACAGAGAAGACTTAAAGCCTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987396       --> ACTATGTTCGGATTCTCAGCACCATCAACAGAGAAGACTTAAAGCCTTCT  Raphanus raphanistrum subsp. landra
EX773324       --> ACTATGTCAGGATTCTCAGCACCATCAACAGAGAAGACCTGAAGCCTTCT  Raphanus raphanistrum subsp. landra
EW724789       --> ACTATGTCCGGATTCTCAGCACCATCAACAGAGAAGACCTGAAGCCTTCT  Raphanus sativus cv Early Scarlet Globe
EX905289       --> ACTATGTCCGGATTCTCAGCACCATCAACAGAGAAGACCTGAAGCCTTCT  Raphanus sativus cv Rat-Tail Radish #3870
FY453459       --> ACTATGTCCGGATTCTCAGCACCATCAACAGAGAAGACCTGAAGCCTTCT  Raphanus sativus cv GSK3-1
FD542474       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               601    -    651
UN23361        --> GCTTCCGTGGCCCTTCACCGTCACTCTAATGCCCTTGTTGATGTCTTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- GCTTCCGTGGCCCTTCACCGTCACTCTAATGCCCTTGTTGATGTCTTGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD983459       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY918855       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX777128       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY901852       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538563       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899215       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX751622       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD974886       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540740       --> GCTTCCGTGGCCCTTCACCGTCACTCTAATGCCCTTGTTGATGTCTTGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX747416       --> GCTTCCGTGGCCCTTCACCGTCACTCTAATGCCCTTGTTGATGTCTTGCC  Raphanus raphanistrum subsp. maritimus
FD542504       --> GCTTCCGTGGCCCTTCACCGTCACTCTAATGCCCTTGTTGATGTCTTGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894977       --> GCTTCCGTGGCCCTTCACCGTCACTCTAATGCCCTCGTTGATGTCTTGCC  Raphanus sativus cv Early Scarlet Globe
FD580459       --> GCTTCCGTGGCCCTTCACCGTCACTCTAATGCCCTCGTTGATGTCTTGCC  Raphanus sativus cv Rat-Tail Radish #3870
FD954117       --> GCTTCCGTGGCCCTTCACCGTCACTCTAATGCCCTCGTTGATGTCTTGCC  Raphanus sativus cv Rat-Tail Radish #3870
FD954973       --> GCTTCCGTGGCCCTTCACCGTCACTCTAATGCCCTCGTTGATGTCTTGCC  Raphanus sativus cv Rat-Tail Radish #3870
EY923003       --> GCTTCCGTGGCCCTTCACCGTCACTCTAATGCCCTTGTTGATGTCTTGCC  Raphanus raphanistrum subsp. landra
EY905408       --> GCTTCCGTGGCCCTTCACCGTCACTCTAATGCCCTTGTTGATGTCTTGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536520       --> GCTTCCGTGGCCCTTCACCGTCACTCTAATGCCCTTGTTGATGTCTTGCC  Raphanus raphanistrum subsp. maritimus
FD978699       --> GCTTCCGTGGCCCTTCACCGTCACTCTAATGCCCTTGTTGATGTCCTGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987396       --> GCTTCCGTGGCCCTTCACCGTCACTCTAATGCCCTTGTTGATGTCTTGCC  Raphanus raphanistrum subsp. landra
EX773324       --> GCTTCCGTCGCCCTTCACCGTCACTCTAATGCCCTCGTCGATGTCTTGCC  Raphanus raphanistrum subsp. landra
EW724789       --> GCTTCCGTGGCCCTTCACCGTCACTCTAATGCCCTCGTTGATGTCTTGCC  Raphanus sativus cv Early Scarlet Globe
EX905289       --> GCTTCCGTGGCCCTTCACCGTCACTCTAATGCCCTCGTTGATGTCTTGCC  Raphanus sativus cv Rat-Tail Radish #3870
FY453459       --> GCTTCCGTGGCCCTTCACCGTCACTCTAATGCCCTCGTTGATGTCTTGCC  Raphanus sativus cv GSK3-1
FD542474       --> .....................gACTCTAATGCCCTTGTTGATGTCTTGCC  Raphanus raphanistrum subsp. raphanistrum (MS)

               651    -    701
UN23361        --> GCCTGAGGCTGATTCGAGCATCTCCCTTCTCAGCCAGTCTGAGAAGCCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- GCCTGAGGCTGATTCGAGCATCTCCCTTCTTAGCCAATCTGAGAAGCCTG
FD983459       <-- ..................................................
EY918855       <-- ..................................................
EX777128       <-- ..................................................
EY901852       <-- ..................................................
FD538563       <-- ..................................................
EX899215       <-- ..................................................
EX751622       <-- ..................................................
FD974886       <-- ..................................................
EV540740       --> GCCTGAGGCTGATTCGAGCATCTCCCTTCTTAGCCAATCTGAGAAGCCTG
EX747416       --> GCCTGAGGCTGATTCGAGCATCTCCCTTCTCAGCCAGTCTGAGAAGCCTG
FD542504       --> GCCTGAGGCTGATTCTAGCATCTCCCTTCTCAGCCAGTCTGAGAAGCCTG
EX894977       --> GCCTGAGGCTGATTCGAGCATCTCCCTTCTCAGCCAGTCTGAGAAGCCTG
FD580459       --> GCCTGAGGCTGATTCGAGCATCTCCCTTCTCAGCCAGTCTGAGAAGCCTG
FD954117       --> GCCTGAGGCTGATTCGAGCATCTCCCTTCTCAGCCAGTCTGAGAAGCCTG
FD954973       --> GCCTGAGGCTGATTCGAGCATCTCCCTTCTCAGCCAGTCTGAGAAGCCTG
EY923003       --> GCCTGAGGCTGATTCGAGCATCTCCCTTCTCAGCCAGTCTGAGAAGCCTG
EY905408       --> GCCTGAGGCTGATTCGAGCATCTCCCTTCTTAGCCAATCTGAGAAGCCTG
FD536520       --> GCCTGAGGCTGATTCGAGCATCTCCCTTCTCAGCCAGTCTGAGAAGCCTG
FD978699       --> GCCTGAGGCTGATTCGAGCATCTCCCTTCTCAGCCAGTCTGAGAAGCCTG
FD987396       --> GCCTGAGGCTGATTCGAGCATCTCCCTTCTCAGCCAGTCTGAGAAGCCTG
EX773324       --> GCCTGAGGCTGATTCTAGCATCTCCCTTCTCAGCCAATCTGAGAAGCCTG
EW724789       --> GCCTGAGGCTGATTCGAGCATCTCCCTTCTCAGCCAGTCTGAGAAGCCTG
EX905289       --> GCCTGAGGCTGATTCGAGCATCTCCCTTCTCAGCCAGTCTGAGAAGCCTG
FY453459       --> GCCTGAGGCTGATTCGAGCATCTCCCTTCTCAGCCAGTCTGAGAAGCCTG
FD542474       --> GCCTGAGGCTGATTCTAGCATCTCCCTTCTCAGCCAGTCTGAGAAGCCTG

               701    -    751
UN23361        --> ACGTCTCCTACAATGATATTGGAGGATGTGATATTCAGAAACAGGAGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- ACGTCTCCTACAATGtaaagtttatctcttttcttgtaaaggtc......
FD983459       <-- ..................................................
EY918855       <-- ..................................................
EX777128       <-- ..................................................
EY901852       <-- ..................................................
FD538563       <-- ..................................................
EX899215       <-- ..................................................
EX751622       <-- ..................................................
FD974886       <-- ..................................................
EV540740       --> ACGTCTCCTACAATGtaaagtttatctcttttcttgtaaaggtc......
EX747416       --> ACGTCTCCTACAATGATATTGGAGGATGTGATATTCAGAAACAGGAGATT
FD542504       --> ACGTCTCCTACAATGATATTGGAGGATGTGATATTCAGAAACAGGAGATT
EX894977       --> ACGTCTCCTACAATGATATTGGAGGATGTGATATTCAGAAACAGGAGATT
FD580459       --> ACGTCTCCTACAATGATATTGGAGGATGTGATATTCAGAAACAGGAGATT
FD954117       --> ACGTCTCCTACAATGATATTGGAGGATGTGATATTCAGAAACAGGAGATT
FD954973       --> ACGTCTCCTACAATGATATTGGAGGATGTGATATTCAGAAACAGGAGATT
EY923003       --> ACGTCTCCTACAATGATATTGGAGGATGTGATATTCAGAAACAGGAGATT
EY905408       --> ACGTCTCCTACAATGATATTGGAGGATGTGATATTCAGAAACAGGAGATT
FD536520       --> ACGTCTCCTACAATGATATTGGAGGATGTGATATTCAGAAACAGGAGATT
FD978699       --> ACGTCTCCTACAATGATATTGGAGGATGTGATATTCAGAAACAGGAGATT
FD987396       --> ACGTCTCCTACAATGATATTGGAGGATGTGATATTCAGAAACAGGAGATT
EX773324       --> ACGTCTCCTACAATGATATTGGAGGATGTGATATTCAGAAACAGGAGATT
EW724789       --> ACGTCTCCTACAATGATATTGGAGGATGTGATATTCAGAAACAGGAGATT
EX905289       --> ACGTCTCCTATAATGATATTGGAGGATGTGATATTCAGAAACAGGAGATT
FY453459       --> ACGTCTCCTACAATGATATTGGAGGATGTGATATTCAGAAACAGGAGATT
FD542474       --> ACGTCTCCTACAATGATATTGGAGGATGTGATATTCAGAAACAGGAGATT

               751    -    801
UN23361        --> CGAGAGGCTGTTGAGTTGCCACTTACCCACCACGAGCTTTACAAACAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- ..................................................
FD983459       <-- ..................................AGCTTTACAAACAGAT
EY918855       <-- ..................................................
EX777128       <-- ..................................................
EY901852       <-- ..................................................
FD538563       <-- ..................................................
EX899215       <-- ..................................................
EX751622       <-- ..................................................
FD974886       <-- ..................................................
EV540740       --> ..................................................
EX747416       --> CGAGAGGCTGTTGGGTTGCCACTTACCCACCACGAGCTTTACAAGCAGAT
FD542504       --> CGAGAGGCTGTTGAGTTGCCACTTACCCACCACGAGCTTTACAAACAGAT
EX894977       --> CGAGAGGCTGTTGAGTTGCCACTTACCCACCACGAGCTTTACAAACAGAT
FD580459       --> CGAGAGGCTGTTGAGTTGCCACTTACCCACCACGAGCTTTACAAACAGAT
FD954117       --> CGAGAGGCTGTTGAGTTGCCACTTACCCACCACGAGCTTTACAAACAGAT
FD954973       --> CGAGAGGCTGTTGAGTTGCCACTTACCCACCACGAGCTTTACAAACAGAT
EY923003       --> CGAGAGGCTGTTGAGTTGCCACTTACCCACCACGAGCTTTACAAACAGAT
EY905408       --> CGAGAGGCTGTTGAGTTGCCACTTACCCACCACGGGCTTTACAAACAGAT
FD536520       --> CGAGAGGCTGTTGAGTTGCCACTTACC.......................
FD978699       --> CGAGAGGCTGTTGAGTTGCCACTTACCCACCACGAGCTTTACAAGCAGAT
FD987396       --> CGAGAGGCTGTTGAGTTGCCACTTACCCACCACGAGCTTTACAAACAGAT
EX773324       --> CGAGAGGCTGTTGAGTTGCCACTTACCCACCACGAGCTTTACAAACAGAT
EW724789       --> CGAGAGGCTGTTGAGTTGCCACTTACCCACCACGAGCTTTACAAACAGAT
EX905289       --> CGAGAGGCTGTTGAGTTGCCACTTACCCACCACGAGCTTTACAAACAGAT
FY453459       --> CGAGAGGCTGTTGAGTTGCCACTTACCCACCACGAGCTTTACAAACAGAT
FD542474       --> CGAGAGGCTGTTGAGTTGCCACTTACCCACCACGAGCTTTACAAACAGAT

               801    -    851
UN23361        --> TGGTATTGACCCTCCACGAGGTGTCTTGCTCTATGGACCTCCTGGTACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD983459       <-- TGGTATTGACCCTCCACGAGGTGTCTTACTCTATGGACCTCCTGGTACCG  Raphanus raphanistrum subsp. landra
EY918855       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX777128       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY901852       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538563       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899215       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX751622       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD974886       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540740       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX747416       --> TGGTATTGACCCTCCACGAGGTGTCTTGCTCTATGGACCTCCTGGTACCG  Raphanus raphanistrum subsp. maritimus
FD542504       --> TGGTATTGACCCTCCACGAGGTGTCTTGCTCTATGGACCTCCTGGTACCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894977       --> TGGTATTGACCCTCCACGAG-TGTCTTACTCTATGGACCTCCTGGTACCG  Raphanus sativus cv Early Scarlet Globe
FD580459       --> TGGTATTGACCCTCCACGAG-TGTCTTGCTCTATGGACCTCCTGGTACCG  Raphanus sativus cv Rat-Tail Radish #3870
FD954117       --> TGGTATTGACCCTCCACGAG-TGTCTTGCTCTATGGACCTCCTGGTA...  Raphanus sativus cv Rat-Tail Radish #3870
FD954973       --> TGGTATTGACCCTCCACGAGGTGTCTTGCTCTATGGACCTCCTGGTACCG  Raphanus sativus cv Rat-Tail Radish #3870
EY923003       --> TGGTATTGACCCTCCACGAGGTGTCTTACTCTATGGACCTCCTGGTACCG  Raphanus raphanistrum subsp. landra
EY905408       --> TGGTATTGACCCTCCACGAGGTGTCTTGCTCTATGGACCTCCTGGTACCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536520       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD978699       --> TGGTATTGACCCTCCACGAGGTGTCTTGCTCTATGGACCTCCTGGTACCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987396       --> TGGTATTGACCCTCCACGAGGTGTCTTACTCTATGGACCTCCTGGTACCG  Raphanus raphanistrum subsp. landra
EX773324       --> TGGTATTGACCCTCCACGAGGTGTCTTACTCTATGGACCTCCTGGTACCG  Raphanus raphanistrum subsp. landra
EW724789       --> TGGTATTGACCCTCCACGAGGTGTCTTACTCTATGGACCTCCTGGTA...  Raphanus sativus cv Early Scarlet Globe
EX905289       --> TGGTATTGACCCTCCACGAGGTGTCTTGCTCTATGGACCTCCTGGTACCG  Raphanus sativus cv Rat-Tail Radish #3870
FY453459       --> TGGTATTGACCCTCCACGAGGTGTCTTGCTCTATGGACCTCCTGGTACCG  Raphanus sativus cv GSK3-1
FD542474       --> TGGTATTGACCCTCCACGAGGTGTCTTGCTCTATGGACCTCCTGGTACCG  Raphanus raphanistrum subsp. raphanistrum (MS)

               851    -    901
UN23361        --> GGAAGACTATGTTGGCTAA-G-CTGTTGCTAACCACACAACCGCTGCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- ..................................................
FD983459       <-- GGAAGACTATGTTGGCTAA-GGCTGTTGCTAACCACACAACCGCTGCTTT
EY918855       <-- .....ACTATGTTGGCTAA-GGCTGTTGCTAACCACACAACCGCTGCTTT
EX777128       <-- ..................................................
EY901852       <-- ..................................................
FD538563       <-- ..................................................
EX899215       <-- ..................................................
EX751622       <-- ..................................................
FD974886       <-- ..................................................
EV540740       --> ..................................................
EX747416       --> GGAAGACTATGTTGGCTAA-G-CTGTTGCTAACCACACAACCGCTGCTTT
FD542504       --> GGAAGACTATGTTGGCTAA-G-CTGTTGCTAACCACACAACCGCTGCTTT
EX894977       --> GGAAGACTATGTTGGCTAA-G-CTGTTGCTAACCACACAACCGCTGCTTT
FD580459       --> GGAAGACTATGTTGGCTAA-G-CTGTTGCTAACCACA.............
FD954117       --> ..................................................
FD954973       --> GGAAGACTATGTTGGCTAA-G-CTGTTGCTAACCACACAACCGCTGCTTT
EY923003       --> GGAAGACTATGTTGGCTAAAG-CTGTTGCTAACCACACAACCGCTGCTTT
EY905408       --> GGAAGACTATGTTGGC..................................
FD536520       --> ..................................................
FD978699       --> GGAAGACTATGTTGGCTAAAG-CTGTTGCTAACCACACAACCGCTGCTTT
FD987396       --> GGAAGACTATGTTGGCTAA-GGCTGTTGCTAACCACACAACCGCTGCTT.
EX773324       --> GGAAGACTATGTTGG...................................
EW724789       --> ..................................................
EX905289       --> GGAAGACTATGTTG....................................
FY453459       --> GGAAGACTATGTTGGCTAA-GGCTGTTGCTAACCACACAACCGCTGCTTT
FD542474       --> GGAAGACTATGTTGGCTAA-GGCTGTTGCTAACCACACAACCGCTGCTTT

               901    -    951
UN23361        --> CATTAGGGTTGTTGGGTCTGAGTTCGTGCAGAAGTACCTCGGCGAGGGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- ..................................................
FD983459       <-- CATTAGGGTTGTTGGGTCTGAGTTCGTGCAGAAGTACCTCGGCGAGGGAC
EY918855       <-- CATTAGGGTTGTTGGGTCTGAGTTCGTGCAGAAGTACCTCGGCGAGGGAC
EX777128       <-- .............................AGAAGTACCTCGGCGAGGGAC
EY901852       <-- ..................................................
FD538563       <-- ..................................................
EX899215       <-- ..................................................
EX751622       <-- ..................................................
FD974886       <-- ..................................................
EV540740       --> ..................................................
EX747416       --> CATTAGGGT-GTTGGGTCTGAGT-CGTGCAGAAGTAC-TCGGCGAGGGAC
FD542504       --> CATTAGGGT-GTTGGCTCTGAGTTCGTGCAGAAGTACCTCGGCGAGGGAC
EX894977       --> CATTAGGGT-GTTGGGTCTGAGTACGTGCAGAAGTACCTCGGCGAGGGAC
FD580459       --> ..................................................
FD954117       --> ..................................................
FD954973       --> CATT..............................................
EY923003       --> CATTAGGGTTGTTGGGTCTGAGTTCGTGCAGAAGTACCTCGGCGAGGGAC
EY905408       --> ..................................................
FD536520       --> ..................................................
FD978699       --> CATTAGGGTTGTTGGGTCTGAGTTCGTGCAGAAGTACCTCGGCGAGGGAC
FD987396       --> ..................................................
EX773324       --> ..................................................
EW724789       --> ..................................................
EX905289       --> ..................................................
FY453459       --> CATTAGGGTTGTTGGGTCTGAGTTCGTGCAGAAGTACCTCGGCGAGGGAC
FD542474       --> CATTAGGGTTGTTGGCTCTGAGTTCGTGCAGAAGTACCTCGGCGAGGGAC

               951    -   1001
UN23361        --> CTCGTATGGTTCGTGATGTCTTCCGCCTTGCCAAGGAGAATGCTCCAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- ..................................................
FD983459       <-- CTCGTATGGTTCGTGATGTCTTCCGCCTTGCCAAGGAGAATGCTCCAGCT
EY918855       <-- CTCGTATGGTTCGTGATGTCTTCCGCCTTGCCAAGGAGAATGCTCCAGCT
EX777128       <-- CTCGTATGGTTCGTGATGTCTTCCGCCTTGCCAAGGAGAATGCTCCAGCT
EY901852       <-- ..................................................
FD538563       <-- ..................................................
EX899215       <-- ..................................................
EX751622       <-- ..................................................
FD974886       <-- ..................................................
EV540740       --> ..................................................
EX747416       --> -TCGTATGGTTCGTGATGTCTTC-GTCTTGCCA-GGAGA-TGCTC-AGCT
FD542504       --> CTCGTATGGTTCGTGATG................................
EX894977       --> CTCGTATGGTTCGTGATGTCTTCCGCCTT.....................
FD580459       --> ..................................................
FD954117       --> ..................................................
FD954973       --> ..................................................
EY923003       --> CTCGTATGGTTCGTGATGTCTTCCGCCTTGCCAAGGAGAATGCTCCAGCT
EY905408       --> ..................................................
FD536520       --> ..................................................
FD978699       --> CTCGTATGGTTCGTGATGTCTT............................
FD987396       --> ..................................................
EX773324       --> ..................................................
EW724789       --> ..................................................
EX905289       --> ..................................................
FY453459       --> CTCGTATGGTTCGTGATGTCTTCCGTCTTGCCAAGGAGAATGCTCCAGCT
FD542474       --> CTCGTATGGTTCGTGATGTCTTCCGGCTTGCCAAGGAGAATGCTCCAGCT

               1001   -   1051
UN23361        --> ATCATATTTATTGATGAGGTGGATGCCATCGCTACTGCTAGGTTCGATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- ..................................................
FD983459       <-- ATCATATTTATTGATGAGGTGGATGCCATCGCTACTGCTAGGTTCGATGC
EY918855       <-- ATCATATTTATTGATGAGGTGGATGCCATCGCTACTGCTAGGTTCGATGC
EX777128       <-- ATCATATTTATTGATGAGGTGGATGCCATCGCTACTGCTAGGTTCGATGC
EY901852       <-- ..................GTGGATGCCATCGCTACTGCTAGGTTCGATGC
FD538563       <-- .......................................AGGTTCGATGC
EX899215       <-- ..................................................
EX751622       <-- ..................................................
FD974886       <-- ..................................................
EV540740       --> ..................................................
EX747416       --> ATCAT.............................................
FD542504       --> ..................................................
EX894977       --> ..................................................
FD580459       --> ..................................................
FD954117       --> ..................................................
FD954973       --> ..................................................
EY923003       --> ATCATATT..........................................
EY905408       --> ..................................................
FD536520       --> ..................................................
FD978699       --> ..................................................
FD987396       --> ..................................................
EX773324       --> ..................................................
EW724789       --> ..................................................
EX905289       --> ..................................................
FY453459       --> ATCATATTTATTGATGAGGTGGATGCCATCGCTACTGCTAGGTTCGATGC
FD542474       --> ATCATATTTATTGATGAGGTGGATGCCATCGCTACTGCTAGGTTCGATGC

               1051   -   1101
UN23361        --> TCAAACAGGAGCTGATAGGGAAGTTCAGCGTATTCTCATGGAACTACTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- ..................................................
FD983459       <-- TCAAACAGGAGCTGATAGGGAAGTTCAGCGTATTCTCATGGAACTACTTA
EY918855       <-- TCAAACAGGAGCTGATAGGGAAGTTCAGCGTATTCTCATGGAACTACTTA
EX777128       <-- TCAAACAGGAGCTGATAGGGAAGTTCAGCGTATTCTCATGGAACTACTTA
EY901852       <-- TCAAACAGGAGCTGATAGGGAAGTTCAGCGTATTCTCATGGAACTACTTA
FD538563       <-- TCAAACAGGAGCTGATAGGGAAGTTCAGCGTATTCTCATGGAACTACTTA
EX899215       <-- ......................GTTCAGCGTATTCTCATGGAACTACTTA
EX751622       <-- ................................TTCTCATGGAACTACTTA
FD974886       <-- ................................TTCTCATGGAACTACTTA
EV540740       --> ..................................................
EX747416       --> ..................................................
FD542504       --> ..................................................
EX894977       --> ..................................................
FD580459       --> ..................................................
FD954117       --> ..................................................
FD954973       --> ..................................................
EY923003       --> ..................................................
EY905408       --> ..................................................
FD536520       --> ..................................................
FD978699       --> ..................................................
FD987396       --> ..................................................
EX773324       --> ..................................................
EW724789       --> ..................................................
EX905289       --> ..................................................
FY453459       --> TCAAACAGGAGCTGATAGGGAAGTTCAGCGTATTCTCATGGAACTTTCTA
FD542474       --> TCAAACAGGAGCTGATAGGGAAGTTCAGCGTATTCTCATGGAACTACTTA

               1101   -   1151
UN23361        --> ATCAGATGGATGGATTTGACCAGACCGTGAATGTCAAGGTCATAATGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- ..................................................
FD983459       <-- ATCAGATGGATGGATTTGACCAGACCGTGAATGTCAAGGTCATAATGGCA
EY918855       <-- ATCAGATGGATGGATTTGACCAGACCGTGAATGTCAAGGTCATAATGGCA
EX777128       <-- ATCAGATGGATGGATTTGACCAGACCGTGAATGTCAAGGTCATAATGGCA
EY901852       <-- ATCAGATGGATGGATTTGACCAGACCGTGAATGTCAAGGTCATAATGGCG
FD538563       <-- ATCAGATGGATGGATTTGACCAGACCGTGAATGTCAAGGTCATAATGGCG
EX899215       <-- ATCAGATGGATGGATTTGACCAGACCGTGAATGTCAAGGTCATAATGGCA
EX751622       <-- ATCAGATGGATGGATTTGACCAGACCGTGAATGTCAAGGTCATAATGGCA
FD974886       <-- ATCAGATGGATGGATTTGACCAGACCGTGAATGTCAAGGTCATAATGGCA
EV540740       --> ..................................................
EX747416       --> ..................................................
FD542504       --> ..................................................
EX894977       --> ..................................................
FD580459       --> ..................................................
FD954117       --> ..................................................
FD954973       --> ..................................................
EY923003       --> ..................................................
EY905408       --> ..................................................
FD536520       --> ..................................................
FD978699       --> ..................................................
FD987396       --> ..................................................
EX773324       --> ..................................................
EW724789       --> ..................................................
EX905289       --> ..................................................
FY453459       --> ATCAGATGGATGGATTTGACCAGACC........................
FD542474       --> ATCAGATGGATGGATTTGACCAGACCGTGAATGTCAAGGTCATAATGGCG

               1151   -   1201
UN23361        --> ACCAACAGGGCAGACACTCTTGATCCTGCTTTCTTACGTCCTGGTAGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- ..................................................
FD983459       <-- ACCAACAGGGCAGACACTCTTGATCCTGCTTTCTTACGTCCTGGTAGACT
EY918855       <-- ACCAACAGGGCAGACACTCTTGATCCTGCTTTCTTACGTCCTGGCAGACT
EX777128       <-- ACCAACAGGGCAGACACTCTTGATCCTGCTTTCTTACGTCCTGGTAGACT
EY901852       <-- ACCAACAGGGCAGACACTCTTGATCCTGCTTTCTTACGTCCTGGTAGACT
FD538563       <-- ACCAACAGGGCAGACACTCTTGATCCTGCTTTCTTACGTCCTGGTAGACT
EX899215       <-- ACCAACAGGGCAGACACTTTTGATCCTGCTTTCTTACGTCCTGGTAGACT
EX751622       <-- ACCAACAGGGCAGACACTCTTGATCCTGCTTTCTTACGTCCTGGTAGACT
FD974886       <-- ACCAACAGGGCAGACACTCTTGATCCTGCTTTCTTACGTCCTGGTAGACT
EV540740       --> ..................................................
EX747416       --> ..................................................
FD542504       --> ..................................................
EX894977       --> ..................................................
FD580459       --> ..................................................
FD954117       --> ..................................................
FD954973       --> ..................................................
EY923003       --> ..................................................
EY905408       --> ..................................................
FD536520       --> ..................................................
FD978699       --> ..................................................
FD987396       --> ..................................................
EX773324       --> ..................................................
EW724789       --> ..................................................
EX905289       --> ..................................................
FY453459       --> ..................................................
FD542474       --> ACCAACAGGGCAGACACTCTTGATCCTGCTCTCTTACGTCCTGGTAGACT

               1201   -   1251
UN23361        --> TGATCGTAAGATTGAGTTCCCCCTTCCTGATAGACGTCAAAAGAGGCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- ..................................................
FD983459       <-- TGATCGTAAGATTGAGTTCCCCCTTCCTGATAGACGTCAAAAGAGGCTTG
EY918855       <-- TGATCGTAAGATTGAGTTCCCCCTTCCTGATAGACGTCAAAAGAGGCTTG
EX777128       <-- TGATCGTAAGATTGAGTTCCCCCTTCCTGATAGACGTCAAAAGAGGCTTG
EY901852       <-- TGATCGTAAGATTGAGTTCCCCCTTCCTGATAGACGTCAAAAGAGGCTTG
FD538563       <-- TGATCGTAAGATTGAGTTCCCCCTTCCTGATAGACGTCAAAAGAGGCTTG
EX899215       <-- TGATCGTAAGATTGAGTTCCCCCTTTTTGATAGACGTCAAAAGAGGCTTG
EX751622       <-- TGATCGTAAGATTGAGTTCCCCCTTCCTGATAGACGTCAAAAGAGGCTTG
FD974886       <-- TGATCGTAAGATTGAGTTCCCCCTTCCTGATAGACGTCAAAAGAGGCTTG
EV540740       --> ..................................................
EX747416       --> ..................................................
FD542504       --> ..................................................
EX894977       --> ..................................................
FD580459       --> ..................................................
FD954117       --> ..................................................
FD954973       --> ..................................................
EY923003       --> ..................................................
EY905408       --> ..................................................
FD536520       --> ..................................................
FD978699       --> ..................................................
FD987396       --> ..................................................
EX773324       --> ..................................................
EW724789       --> ..................................................
EX905289       --> ..................................................
FY453459       --> ..................................................
FD542474       --> TGATCGTAAGATTGAGTTCCCCCTTCCTGATAGACGTCAAAAGAGGCTTG

               1251   -   1301
UN23361        --> TTTTCCAGGTATGCACTGCCAAAATGAACCTCAGCGATGAGGTTGACTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- ..................................................
FD983459       <-- TTTTCCAGGTATGCACTGCCAAAATGAACCTCAGCGATGAGGTTGACTTG
EY918855       <-- TTTTCCAGGTATGCACTGCCAAAATGAACCTCAGCGATGAGGTTGACTTG
EX777128       <-- TTTTCCAGGTATGCACTGCCAAAATGAACCTTAGCGATGAGGTTGACTTG
EY901852       <-- TTTTCCAGGTATGCACTGCCAAAATGAACCTCAGCGATGAGGTTGACTTG
FD538563       <-- TTTTCCAGGTATGCACTGCCAAAATGAACCTCAGCGATGAGGTTGACTTG
EX899215       <-- TTTTCCAGGTATGCACTGCCAAAATGAACCTCAGCGAT-AGGTTGACTTG
EX751622       <-- TTTTCCAGGTATGCACTGCCAAAATGAACCTCAGCGATGAGGTTGACTTG
FD974886       <-- TTTTCCAGGTATGCACTGCCAAAATGAACCTCAGCGATGAGGTTGACTTG
EV540740       --> ..................................................
EX747416       --> ..................................................
FD542504       --> ..................................................
EX894977       --> ..................................................
FD580459       --> ..................................................
FD954117       --> ..................................................
FD954973       --> ..................................................
EY923003       --> ..................................................
EY905408       --> ..................................................
FD536520       --> ..................................................
FD978699       --> ..................................................
FD987396       --> ..................................................
EX773324       --> ..................................................
EW724789       --> ..................................................
EX905289       --> ..................................................
FY453459       --> ..................................................
FD542474       --> TTTTCCAGGTATGCGCTGCCAAAATGAACCTCAGCGATGAAGTTGACTTG

               1301   -   1351
UN23361        --> GAAGACTATGTTTCACGTCCTGATAAAATTAGCGCTGCTGAGATAGCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- ..................................................
FD983459       <-- GAAGACTATGTTTCACGTCCTGATAAAATTAGCGCTGCTGAGATAGCAGC
EY918855       <-- GAAGACTATGTTTCACGTCCTGATAAAATTAGCGCTGCTGAGATAGCAGC
EX777128       <-- GAAGACTATGTTTCACGTCCTGATAAAATTAGTGCTGCTGAGATAGCAGC
EY901852       <-- GAAGACTATGTTTCACGTCCTGATAAAATTAGCGCTGCTGAGATAGCGGC
FD538563       <-- GAAGACTATGTTTCACGTCCTGATAAAATTAGCGCTGCTGAGATAGCGGC
EX899215       <-- GATGACTATGTTTTACGTCCTGATAAAATTAGCGCTGCTGAGATAGCAGC
EX751622       <-- GAAGACTATGTTTCACGTCCTGATAAAATTAGCGCTGCTGAGATAGCAGC
FD974886       <-- GAAGACTATGTTTCACGTCCTGATAAAATTAGCGCTGCTGAGATAGCAGC
EV540740       --> ..................................................
EX747416       --> ..................................................
FD542504       --> ..................................................
EX894977       --> ..................................................
FD580459       --> ..................................................
FD954117       --> ..................................................
FD954973       --> ..................................................
EY923003       --> ..................................................
EY905408       --> ..................................................
FD536520       --> ..................................................
FD978699       --> ..................................................
FD987396       --> ..................................................
EX773324       --> ..................................................
EW724789       --> ..................................................
EX905289       --> ..................................................
FY453459       --> ..................................................
FD542474       --> GAAGACTATGTTTCACATCCTGATAAA-TTAGCGCTGCTGAGATAGCGGC

               1351   -   1401
UN23361        --> AATCTGCCAGGAAGCTGGAATGCATGCGGTGCGTAAGAACAGATATGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- ..................................................
FD983459       <-- AATTTGCCAGGAAGCTGGAATGCATGCGGTGCGTAAGAACAGATATGTGA
EY918855       <-- AATCTGCCAGGAAGCTGGAATGCATGCGGTGCGTAAGAACAGATATGTGA
EX777128       <-- AATCTGCCAGGAAGCTGGAATGCATGCGGTGCGTAAGAACAGATATGTGA
EY901852       <-- AATCTGCCAGGAAGCTGGAATGCATGCGGTGCGTAAGAACAGATATGTGA
FD538563       <-- AATCTGCCAGGAAGCTGGAATGCATGCGGTGCGTAAGAACAGATATGTGA
EX899215       <-- AATCTGCCAGGAAGCTGGAATGCATGCGGTGCGTAAGAACAGATATGTGA
EX751622       <-- AATTTGCCAGGAAGCTGGAATGCATGCG......................
FD974886       <-- AATCTGCCAGGAAGCTGGAATGCATGCGGCGCGTAAGAACAGATATGTGA
EV540740       --> ..................................................
EX747416       --> ..................................................
FD542504       --> ..................................................
EX894977       --> ..................................................
FD580459       --> ..................................................
FD954117       --> ..................................................
FD954973       --> ..................................................
EY923003       --> ..................................................
EY905408       --> ..................................................
FD536520       --> ..................................................
FD978699       --> ..................................................
FD987396       --> ..................................................
EX773324       --> ..................................................
EW724789       --> ..................................................
EX905289       --> ..................................................
FY453459       --> ..................................................
FD542474       --> AATCTGCCAGGA-GCTGGAATGCATGCG-TGCGTA-G-ACAGATATGTGA

               1401   -   1451
UN23361        --> TACTGCCTAAGGACTTCGAGAAGGGTTACCGCTCAAATGTGAAGAAGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- ..................................................
FD983459       <-- TACTGCCTAAGGACTTCGAGAAGGGTTACCGCTCAAATGTGAAGAAGCCA
EY918855       <-- TACTGCCTAAGGACTTCGAGAAGGGTTACCGCTCAAATGTGAAGAAGCCA
EX777128       <-- TACTGCCTAAGGACTTCGAGAAGGGTTACCGCTCAAATGTGAAGAAGCCA
EY901852       <-- TACTGCCTAAGGACTTCGAGAAGGGTTACCGCTCAAATGTGAAGAAGCCA
FD538563       <-- TACTGCCTAAGGACTTCGAGAAGGGTTACCGCTCAAATGTGAAGAAGCCA
EX899215       <-- TACTGCCTAAGGACTTCGAGAAGGGTTACCGCTCAAATGTGAAGAAGCCA
EX751622       <-- ..................................................
FD974886       <-- TACTGCCTAAGGACTTCGAGAAGGGTTACCGCTCAAATGTGAAGAAGCCA
EV540740       --> ..................................................
EX747416       --> ..................................................
FD542504       --> ..................................................
EX894977       --> ..................................................
FD580459       --> ..................................................
FD954117       --> ..................................................
FD954973       --> ..................................................
EY923003       --> ..................................................
EY905408       --> ..................................................
FD536520       --> ..................................................
FD978699       --> ..................................................
FD987396       --> ..................................................
EX773324       --> ..................................................
EW724789       --> ..................................................
EX905289       --> ..................................................
FY453459       --> ..................................................
FD542474       --> TAC...............................................

               1451   -   1501
UN23361        --> GACACGGACTTTGAGTTCTACAAGTGAGGAGAAAGCAGAGATGGGAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- ..................................................
FD983459       <-- GACACGGACTTTGAGTTCTACAAGTGAGGAGAAAGCAGAGATGGGAAAGC
EY918855       <-- GACACGGACTTTGAGTTCTACAAGTGAGGAGAAAGCAGAGATGGGAAAGC
EX777128       <-- GACACGGACTTTGAGTTTTACAAGTGAGGAGAAAGCAGAGATGGGAAAGC
EY901852       <-- GACACGGACTTTGAGTTCTACAAGTGAGGAGAAAGCAGAGATGGGAA-GC
FD538563       <-- GACACGGACTTTGAGTTTTACAAGTGAGGAGAAAGCAGAGATGGGAA-GC
EX899215       <-- GACACGGACTTTGAGTTTTACAAGTGAGGAGAAAGCAGAGATGGGAAAGC
EX751622       <-- ..................................................
FD974886       <-- GACACGGACTTTGAGTTCTACAAGTGAGGAGAAAGCAGAGATGGGAAAGC
EV540740       --> ..................................................
EX747416       --> ..................................................
FD542504       --> ..................................................
EX894977       --> ..................................................
FD580459       --> ..................................................
FD954117       --> ..................................................
FD954973       --> ..................................................
EY923003       --> ..................................................
EY905408       --> ..................................................
FD536520       --> ..................................................
FD978699       --> ..................................................
FD987396       --> ..................................................
EX773324       --> ..................................................
EW724789       --> ..................................................
EX905289       --> ..................................................
FY453459       --> ..................................................
FD542474       --> ..................................................

               1501   -   1551
UN23361        --> AGATTATGCGTGTTGTTAAAACTCCTGTGTT-----TTTTTTTTTT--AT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- ..................................................
FD983459       <-- AGATTATGCGTGTTGTTAAAACTCCTGTGTT-----TTTTTTTTTT--AA
EY918855       <-- AGATTATGCGTGTTGTTAAAACTCCTGTGTT-----TTTTTTTTTT--AA
EX777128       <-- AGATTATGCGTGTTGTTAAAACCCCTGTGTT-----TTTTTTT--T--AA
EY901852       <-- AGATTATGCGTGTTGTTAAAACTCCAGTTTTCTTTCTTTTTTTTTT--AA
FD538563       <-- AGATTATGCGTGTTGTTAAAACTTCAGTTTT-CTTTTTTTTTTTTT--AA
EX899215       <-- AGATTATGCGTGTTGTTAAAACTCCTGTGTT-----TTTTTTTTTTTTAA
EX751622       <-- ..................................................
FD974886       <-- AGATTATGCGTGTTGTTAAAACTCCTGTGTT-----TTTTTTTTTT--AA
EV540740       --> ..................................................
EX747416       --> ..................................................
FD542504       --> ..................................................
EX894977       --> ..................................................
FD580459       --> ..................................................
FD954117       --> ..................................................
FD954973       --> ..................................................
EY923003       --> ..................................................
EY905408       --> ..................................................
FD536520       --> ..................................................
FD978699       --> ..................................................
FD987396       --> ..................................................
EX773324       --> ..................................................
EW724789       --> ..................................................
EX905289       --> ..................................................
FY453459       --> ..................................................
FD542474       --> ..................................................

               1551   -   1601
UN23361        --> TATATCTGCATGGATCTGCAATTTAATGTATGAACTAAGTTGCATCTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- ..................................................
FD983459       <-- TATATCTGCATGGATCTGCAATTTAATGTATGAACTAAGTTGCATCTCTA
EY918855       <-- TATATCTGCATGGATCTGCAATTTAATGTATGAACTAAGTTGCATCTCTA
EX777128       <-- TATATCTGCATGGATCTGCAATTTAATGTATGAACTAAGTTGCATCTCTA
EY901852       <-- TATATCTGCATAGATCTGCAGTTTAATGTATGAACTAAGTTGCATCTCTG
FD538563       <-- TATATCTGCATAGATCTGCAGTTTAATGTATGAACTAAGTTGCATCTCTG
EX899215       <-- TATATCTGCATGGATCTGCAATTTAATGTATGAACTAAGTTGCATCTCTA
EX751622       <-- ..................................................
FD974886       <-- TATATCTGCATGGATCTGCAATTTAATGTATGAACTAGGTTGCATCTCTA
EV540740       --> ..................................................
EX747416       --> ..................................................
FD542504       --> ..................................................
EX894977       --> ..................................................
FD580459       --> ..................................................
FD954117       --> ..................................................
FD954973       --> ..................................................
EY923003       --> ..................................................
EY905408       --> ..................................................
FD536520       --> ..................................................
FD978699       --> ..................................................
FD987396       --> ..................................................
EX773324       --> ..................................................
EW724789       --> ..................................................
EX905289       --> ..................................................
FY453459       --> ..................................................
FD542474       --> ..................................................

               1601   -   1651
UN23361        --> ATTAATGAAGTTTCAAGTTCGC
                   ~~~~~~~~~~~~~~~~~~~~~~
EV536247       <-- ......................
FD983459       <-- ATTAATG...............
EY918855       <-- ATTAATG...............
EX777128       <-- ATTAATGAAGTT-CAGGTTCGC
EY901852       <-- ATTAATGAAGTTTCAAGTTCGC
FD538563       <-- ATTAATGAAGTTTCAAGTTCac
EX899215       <-- ATTAATG...............
EX751622       <-- ......................
FD974886       <-- ATTAATGAAGTT-CAAGTTC..
EV540740       --> ......................
EX747416       --> ......................
FD542504       --> ......................
EX894977       --> ......................
FD580459       --> ......................
FD954117       --> ......................
FD954973       --> ......................
EY923003       --> ......................
EY905408       --> ......................
FD536520       --> ......................
FD978699       --> ......................
FD987396       --> ......................
EX773324       --> ......................
EW724789       --> ......................
EX905289       --> ......................
FY453459       --> ......................
FD542474       --> ......................