Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN23363

               1      -     51
UN23363        --> AAGGGATAAACCAACTTTTATTTCATTATTGTGGGCTATTCGCCAAACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- AAGGGATAAACCAACTTT-ATTTCATTATTGTGGGCTATTCGCCAAACAG
EY898320       <-- ..................................................
EY900715       <-- ..................................................
EY940111       <-- ..................................................
EY913767       <-- ..................................................
EV541471       --> AAGGGATAAACCAACTTT-ATTTCATTATTGTGGGCTATTCGCCAAACAG
EV530993       --> ......agcACCAACTTTTATTTCATTATTGTGGGCTATTCGCCAAACAG
EY896190       --> .....agacACCAACTTTTATTTCATTATTGTGGGCTATTCGCCAAACAG

               51     -    101
UN23363        --> AGCTACACTCAACATGCACTAATTGAAAAATTCGCAGTTACAATATCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- AGCTACACTCAACATGCACTAAT-GAAAAATTCGCAGTTACAATATCAGA
EY898320       <-- ..................................................
EY900715       <-- ..................................................
EY940111       <-- ..................................................
EY913767       <-- ..................................................
EV541471       --> AGCTACACTCAACATGCACTAAT-GAAAAATTCGCAGTTACAATATCAGA
EV530993       --> AGCTACACTCAACATGCACTAATTGAAAAATTCGCAGTTACAATATCAGA
EY896190       --> AGCTACACTCAACATGCACTAATTGAAAAATTCGCAGTTACAATATCAGA

               101    -    151
UN23363        --> CAGTCTAAAAATCCCGAACACCCTCTAGGACTCATCAGTTGGTAGGTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- CAGTCTAAAAATCCCGAACACCCTCTAGGACTCACCAGTTGGTAGGTGGT
EY898320       <-- ..................................................
EY900715       <-- ..................................................
EY940111       <-- ..................................................
EY913767       <-- ..................................................
EV541471       --> CAGTCTAAAAATCCCGAACACCCTCTAGGACTCACCAGTTGGTAGGTGGT
EV530993       --> CAATCTAAAAATCCCGAACACCCTCTAGGACTCATCAGTTGGTAGGTGGT
EY896190       --> CAATCTAAAAATCCCGAACACCCTCTAGGACTCATCAGTTGGTAGGTGGT

               151    -    201
UN23363        --> AACAGAGTGGTCTTATCAAGAGAAAGAGACTTTGAAGTCCGTCTTAGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- AACAGAGTGGTCTTATCAAGAGAAAGAGACTTTGAACTCCGTCTTAGATC
EY898320       <-- ..................................................
EY900715       <-- ..................................................
EY940111       <-- ..................................................
EY913767       <-- ..................................................
EV541471       --> AACAGAGTGGTCTTATCAAGAGAAAGAGACTTTGAACTCCGTCTTAGATC
EV530993       --> AACAGAGAGGTCTCATCAAGAGAAAGAGACTTTGAAGTCCGTCTTAGGCC
EY896190       --> AACAGAGAGGTCTCATCAAGAGAAAGAGACTTTGAAGTCCGTCTTAGGCC

               201    -    251
UN23363        --> AAGCCAACGAGCTTCTCACTTATCTCCCAAACTTTACGAGCCTTCTCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- AAGCCAACGAGCTTCTCACTTATCTCCCAAACTTTACGAGCCTTCTCAAC
EY898320       <-- ..................................................
EY900715       <-- ..................................................
EY940111       <-- ..................................................
EY913767       <-- ..................................................
EV541471       --> AAGCCAACGAGCTTCTCACTTATCTCCCAAACTTTACGAGCCTTCTCAAC
EV530993       --> AAGCCAACGAGCTTCTCACTGATCTCCCAAACTTTACGAGCCTTCTCAAC
EY896190       --> AAGCCAACGAGCTTCTCACTGATCTCCCAAACTTTACGAGCCTTCTCAAC

               251    -    301
UN23363        --> GTCACTCGCTTCTTCTGACAACTGGTTCTCAAAAGAAGCCGAAGCCTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- GTCACTCGCTTCTTCTGACAACTGGTTCTCAAAAGACGCCGAAGCCTTGT
EY898320       <-- .....TCGCTTCTTCTGACAACTGGTTCTCAAAAGAAGCCGAAGCCTTGT
EY900715       <-- ..................................................
EY940111       <-- ..................................................
EY913767       <-- ..................................................
EV541471       --> GTCACTCGCTTCTTCTGACAACTGGTTCTCAAAAGACGCCGAAGCCTTGT
EV530993       --> ATCACTCGCTTCTTCTGACAACTGGTTCTCAAAAGAAGCCGAAGCTTTGT
EY896190       --> ATCACTCGCTTCTTCTGACAACTGGTTCTCAAAAGAAGCCGAAGCTTTGT

               301    -    351
UN23363        --> TCCAGCTCCAGTACACTCCTGATTTCGTCAAGCTCGGATCACTCACCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- TCCAGCTCCAGTACACTCCTGATTTCGTCAAGCTCGGATCACTCACCACC
EY898320       <-- TCCAGCTCCAGTACACTCCTGATTTCGCCAAGCTCGGATCACTCACCACC
EY900715       <-- TCCAGCTCCAGTACACTC-TGATTTCGTCAAACTCGGATCACTCACCAC-
EY940111       <-- ..................................................
EY913767       <-- ..................................................
EV541471       --> TCCAGCTCCAGTACACTCCTGATTTCGTCAAGCTCGGATCACTCACCACC
EV530993       --> TCCAGCTCCAGTACACTCCTGATTTCGTCAAACTCGGATCACTCACCACC
EY896190       --> TCCAGCTCCAGTACACTCCTGATTTCGTCAAACTCGGATCACTCACCACC

               351    -    401
UN23363        --> TGAGCAAGTCTTTTGCCAGACTCTGTCTCGGAGACGTATCCTTTGGTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- TGAGCAAGTCTTTTGCCAGACTCTGTCTCGGAGACGTATCCTTTGGTGAT
EY898320       <-- TGAGCAAGTCTTTTGCCAGACTCTGTCTCGGAGACGTATCCTTTGGTGAT
EY900715       <-- TGAGCAAGTCTTT-GCCAGACTCTGTCTCGGAGACGTATC-TTTGGTGAT
EY940111       <-- .................................................T
EY913767       <-- ..................................................
EV541471       --> TGAGCAAGTCTTTTGCCAGACTCTGTCTCGGAGACGTATCCTTTGGTGAT
EV530993       --> TGAGCAAGTCTTTTGCCAGACTCTGTCTCGGAGACGTATCCTTTGGTGAT
EY896190       --> TGAGCAAGTCTTTTGCCAGACTCTGTCTCGGAGACGTATCCTTTGGTGAT

               401    -    451
UN23363        --> GTACTTCTGAAACGGAGGGAATAGTGTTCGGAAAAGCGGGATGTGCTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- GTACTTCTGAAACGGAGGGAAGAGTGTTCGGAAAAGCGGGATGTGCTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898320       <-- GTACTTCTGAAACGGAGGGAATAGTGTTCGGAAAAGCGGGATGTGCTCTC  Raphanus raphanistrum subsp. maritimus
EY900715       <-- GTACTTCTGAAACGGAGGGAATAGTGTTCGGAAAAGCGGGATGTGCTCTC  Raphanus raphanistrum subsp. maritimus
EY940111       <-- GTACT-CTGAAACGGAGGGAAGAGTGTTCGGAAA-GCGGAATGTGCTCTC  Raphanus sativus cv Early Scarlet Globe
EY913767       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV541471       --> GTACTTCTGAAACGGAGGGAAGAGTGTTCGGAAAAGCGGGATGTGCTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV530993       --> GTACTTCTGAAACGGAGGGAATAGTGTTCGGAAAAGCGGGATGTGCTCTC  Raphanus raphanistrum subsp. maritimus
EY896190       --> GTACTTCTGAAACGGAGGGAATAGTGTTCGGAAAAGCGGGATGTGCTCTC  Raphanus raphanistrum subsp. maritimus

               451    -    501
UN23363        --> TGAATAAACCTGTGGAGGCGATGCAACCAGGGTAAAGCGAAGCGAATGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- TGAATAAACCGGTGGAGGCGATGCAACCAGGGTACAGCGAGGCGAACGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898320       <-- TGAATAAACCTGTGGAGGCGATGCAACCAGGGTAAAGCGAAGCGAATGTG  Raphanus raphanistrum subsp. maritimus
EY900715       <-- TGAATAAACCTGTGGAGGCGATGCAACCAGGGTAAAGCGAAGCGAATGTG  Raphanus raphanistrum subsp. maritimus
EY940111       <-- TGAATAAACCGGTGGAGGCGATGCAACCAGGGTACAGCGAGGCAAATGTG  Raphanus sativus cv Early Scarlet Globe
EY913767       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV541471       --> TGAATAAACCGGTGGAGGCGATGCAACCAGGGTACAGCGAGGCGAACGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV530993       --> TGAATAAACCTGTGGAGGCGATGCAACCAGGGTAAAGCGAAGCGAATGTG  Raphanus raphanistrum subsp. maritimus
EY896190       --> TGAATAAACCTGTGGAGGCGATGCAACCAGGGTAAAGCGAAGCGAATGTG  Raphanus raphanistrum subsp. maritimus

               501    -    551
UN23363        --> ATTCCTGTTTCTTCATGGTAACGCCTGTGAAACTCTTGCATCGTCAACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- ATTCCTGTTTCTTCATGGTAACGCCTGTGAAACTCTTGCATCGTCAACAT
EY898320       <-- ATTCCTGTTTCTTCATGGTAACGCCTGTGAAACTCTCGCATCGTCAATAT
EY900715       <-- ATTCCTGTTTCTTCATGGTAACGCCTGTGAAACTCTTGCATCGTCAACAT
EY940111       <-- ATTC-TGTTTCTTCATGGTAACGC-TGTGAAACTCTTGCATCGTCAACAT
EY913767       <-- ..................................................
EV541471       --> ATTCCTGTTTCTTCATGGTAACGCCTGTGAAACTCTTGCATCGTCAACAT
EV530993       --> ATTCCTGTTTCTTCATGGTAACGCCTGTGAAACTCTTGCATCGTCAACAT
EY896190       --> ATTCCTGTTTCTTCATGGTAACGCCTGTGAAACTCTTGCATCGTCAACAT

               551    -    601
UN23363        --> GTTGCACACTTTGCTGTCTTTGTAAGCCTTTGCACCGTCGAAATCTCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- GTTGCACACTTTGCTGTCTTTGTAAGCCTTTGCACCGTCGAATTCTCCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898320       <-- GTTGCACACTTTGCTGTCTTTGTAAGCCTTTGCACCGTCGAAATCTCCTC  Raphanus raphanistrum subsp. maritimus
EY900715       <-- GTTGCACACTTTGCTGTCTTTGTAAGCCTTTGCACCGTCGAAATCTCCTC  Raphanus raphanistrum subsp. maritimus
EY940111       <-- GTTGCACACTTTGCTGTCTTTGTAAGCCTTTGCACCGTCGAATTCTCCTC  Raphanus sativus cv Early Scarlet Globe
EY913767       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV541471       --> GTTGCACACTTTGCTGTCTTTGTAAGCCTTTGCACCGTCGAATTCTCCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV530993       --> GTTGCACACTTTGCTGTCTTTGTAAGCCTTTGCACCGTCGAAATCTCCTC  Raphanus raphanistrum subsp. maritimus
EY896190       --> GTTGCACACTTTGCTGTCTTTGTAAGCCTTTGCACCGTCGAAATCTCCTC  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN23363        --> CATCGATCATCGCCGAGCTGTTCAAACCGTTCAAGCCTCCCGCTAAGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- CAT...............................................
EY898320       <-- CATCGATCATCGCCGAGCTGTTCAAACCGTTCAAGCCTCCCGCTAAGCCT
EY900715       <-- CATCGATCATCGCCGAGCTGTTCAAACCGTTCAAGCCTCCCGCTAAGCCT
EY940111       <-- CATCGATCATCGCCGAGCTGTTCAAACCGTTCAAGCCACCAGCTAAACCT
EY913767       <-- ..................................................
EV541471       --> CAT...............................................
EV530993       --> CATCGATCATCGCCGAGCTGTTCAAACCGTTCAAGCCTCCCGCTAAGCCT
EY896190       --> CATCGATCATCGCCGAGCTGTTCAAACCGTTCAAGCCTCCCGCTAAGCCT

               651    -    701
UN23363        --> CTCAAGTCGCCTAGGTTAGCTTTAGGTGGTACGTTACCAGCCAATGTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- ..................................................
EY898320       <-- CTCAAGTCGCCTAGGTTAGCTTTAGGTGGTACGTTACCAGCCAATGTATT
EY900715       <-- CTCAAGTCGCCTAGGTTAGCTTTAGGTGGTACGTTACCAGCCAATGTATT
EY940111       <-- CTCAAGTCGCCTAGGTTAGCTTTCGGTGGTACGTTACCAGCCAATGTGTT
EY913767       <-- ..................................................
EV541471       --> ..................................................
EV530993       --> CTCAAGTCGCCTAGGTTAGCTTTAGGTGGTACGTTACCAGCCAATGTATT
EY896190       --> CTCAAGTCGCCTAGGTTAGCTTTAGGTGGTACGTTACCAGCCAATGTATT

               701    -    751
UN23363        --> CGTGTTCCCTGTAATGGATCCGACAATGATGAGACGCTTTGAAGGGTAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- ..................................................
EY898320       <-- CGTGTTCCCTGTAATGGATCCGACAATGATGAGACGCTTTGAAGGGTAAT
EY900715       <-- CGTGTTCCCTGTAATGGATCCGACAATGATGAGACGCTTTGAAGGGTAAT
EY940111       <-- CGTGTTCCCTGTAATGGATCCGACAATGATGAGACGCTTTGAAGGGTAAT
EY913767       <-- ............AATGGATCCGACAATGATGAGACGCTTTGAAGGATAAT
EV541471       --> ..................................................
EV530993       --> CGTGTTCCCc........................................
EY896190       --> CGTGTTCCCTG.......................................

               751    -    801
UN23363        --> CAGACTTCTTCAAGTCATCAAGCAACAGCCTCGAGAGAAGAAAATGTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- ..................................................
EY898320       <-- CAGACTTCTTCAAGTCATCAAGCAACAGCCTCGAGAGAAGAAAATGTCCC
EY900715       <-- CAGACTTCTTCAAGTCATCAAGCAACAGCCTCGAGAGAAGAAAATGTCCC
EY940111       <-- CAGACTTCTTCAAGTCATCAAGCAACAGCCTCGAGAGAAGAAAATGTCCC
EY913767       <-- CAGACTTCTTCAAGTCATCAAGCAACAGCCTCGAGAGAAGAAAATGTCCC
EV541471       --> ..................................................
EV530993       --> ..................................................
EY896190       --> ..................................................

               801    -    851
UN23363        --> AAGTGATTGGTCGCAACGCTAAGCTCAAACCCTTCTGCGCTGTAGGTAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- ..................................................
EY898320       <-- AAGTGATTGGTCGCAACGCTAAGCTCAAACCCTTCTGCGCTGTAGGTAGG
EY900715       <-- AAGTGATTGGTCGCAACGCTAAGCTCAAACCCTTCTGCGCTGTAGGTAGG
EY940111       <-- AAGTGATTGGTCGCAACGCTAAGCTCAAACCCTTCTGCGCTGTAGGTAGG
EY913767       <-- AAATGATTGGTCGCAACGCTAAGCTCAAACCCTTCTGCGCTGTAGGTAGG
EV541471       --> ..................................................
EV530993       --> ..................................................
EY896190       --> ..................................................

               851    -    901
UN23363        --> TTCTTTAGCTGTCGGGAAATAGACAGCAGCGTTGCAGACCAAAACATCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- ..................................................
EY898320       <-- TTCTTTAGCTGTCGGGAAATAGACAGCAGCGTTGCAGACCAAAACATCGA
EY900715       <-- TTCTTTAGCTGTCGGGAAATAGACAGCAGCGTTGCAGACCAAAACATCGA
EY940111       <-- CTCTTTAGCTGTCGGGAAATAGACAGCAGCGTTGCAGACCAAAACATCGA
EY913767       <-- TTCTTTAGCTGTCGGGAAATAGACAGCAGCGTTGCAGACCAAAACATCGA
EV541471       --> ..................................................
EV530993       --> ..................................................
EY896190       --> ..................................................

               901    -    951
UN23363        --> GAGGCATCTCCGATCTCCTGAAGCTATCAACGAACTGTCTCACGCTGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- ..................................................
EY898320       <-- GAGGCATC..........................................
EY900715       <-- GAGGCATCTCCGATCTCCTGAAGCTATCAACGAACTGTCTCACACTGTCT
EY940111       <-- GAGGCATCTCCGATCTCCTGAAGCTATCAACGAACTGTCTCACGCTGTCT
EY913767       <-- GAGGCATCTCCGATCTCCTGAAGCTATCAACGAACTGTCTCACGCTGTCT
EV541471       --> ..................................................
EV530993       --> ..................................................
EY896190       --> ..................................................

               951    -   1001
UN23363        --> AACGAAGCCAAGTCTAGATGCATCACCGTGTAGCTGTCTTTAGGCATCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- ..................................................
EY898320       <-- ..................................................
EY900715       <-- AACGAAGCCAAGTCTAGATGCATCACCGTGTAGCTGTCTTTAGGCATCCC
EY940111       <-- AACGAAGCCAAGTCTAGATGCATCACCGTGTAGCTGTCTTTAGGCATCCC
EY913767       <-- AACGAAGCCAAGTCTAGATGCATCACCGTGTAGCTGTCTTTAGGGATCCC
EV541471       --> ..................................................
EV530993       --> ..................................................
EY896190       --> ..................................................

               1001   -   1051
UN23363        --> TGCGGATTTGGCCGCTCTCTCGGCTTTGAGGAAGTCCCTGCACGCCATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- ..................................................
EY898320       <-- ..................................................
EY900715       <-- TGCGGATTTGGCCGCTCTCc..............................
EY940111       <-- TGCGGATTTGGCCGCTCTCTCGGCTTTGAGGAAGTCCCTGCACGCCATTA
EY913767       <-- TGCGGATTTGGCCGCTCTCTCGGCTTTGAGGAAGTCCCTGCACGCCATTA
EV541471       --> ..................................................
EV530993       --> ..................................................
EY896190       --> ..................................................

               1051   -   1101
UN23363        --> TCACGTGCCATTTCCCTGTCTCGGCGAGGGCTTTGGCCGTGGCTAGACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- ..................................................
EY898320       <-- ..................................................
EY900715       <-- ..................................................
EY940111       <-- TCACGTGCCATTTCCCTGTCTCGGCGAGGGCTTTGGCCGTGGCTAGACCT
EY913767       <-- TCACGTGCCATTTCCCCGTCTCGGCGAGGGCTTTGGCCGTGGCTAGACCT
EV541471       --> ..................................................
EV530993       --> ..................................................
EY896190       --> ..................................................

               1101   -   1151
UN23363        --> AACCCTGACGAAGCTCCCGTGACCACCACGTTGCCTTTCCTCAAGGTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- ..................................................
EY898320       <-- ..................................................
EY900715       <-- ..................................................
EY940111       <-- AACCCTGACGAAGCTCCCGTGc............................
EY913767       <-- AACCCTGACGAAGCTCCCGTGACCACCACGTTGCCTTTCCTCAAGGTCTT
EV541471       --> ..................................................
EV530993       --> ..................................................
EY896190       --> ..................................................

               1151   -   1201
UN23363        --> CTTGCCGTCAACTGGAGATTTTGTGATGGAGGGGCTCGAAGTTGCGGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- ..................................................
EY898320       <-- ..................................................
EY900715       <-- ..................................................
EY940111       <-- ..................................................
EY913767       <-- CTTGCCGTCAACTGGAGATTTTGTGATGGAGGGGCTCGAAGTTGCGGCAG
EV541471       --> ..................................................
EV530993       --> ..................................................
EY896190       --> ..................................................

               1201   -   1251
UN23363        --> TTTGTGCTCTAATCGCTACGTTCCTCGAGCTATGTTCTCTCTTGAATCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- ..................................................
EY898320       <-- ..................................................
EY900715       <-- ..................................................
EY940111       <-- ..................................................
EY913767       <-- TTTGTGCTCTAATCGCTACGTTCCTCGAGCTATGTTCTCTCTTGAATCAT
EV541471       --> ..................................................
EV530993       --> ..................................................
EY896190       --> ..................................................

               1251   -   1301
UN23363        --> AATGAGGAAGAGCCATGTTCGTTAACAGAGGCACCAAAGAGAGTCGAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- ..................................................
EY898320       <-- ..................................................
EY900715       <-- ..................................................
EY940111       <-- ..................................................
EY913767       <-- AATGAGGAAGAGCCATGTTCGTTAACAGAGGCACCAAAGAGAGTCGAGTC
EV541471       --> ..................................................
EV530993       --> ..................................................
EY896190       --> ..................................................

               1301   -   1351
UN23363        --> CTTGAAGGATGATGAAGAAGCATTCAGTTTTACATCTTTTCGGACAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- ..................................................
EY898320       <-- ..................................................
EY900715       <-- ..................................................
EY940111       <-- ..................................................
EY913767       <-- CTTGAAGGATGATGAAGAAGCATTCAGTTTTACATCTTTTCGGACAGAGA
EV541471       --> ..................................................
EV530993       --> ..................................................
EY896190       --> ..................................................

               1351   -   1401
UN23363        --> AAGCAGAGGAGACCAAAGAAGCGGCTTGAAGGGCCATTTTTGGACAAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- ..................................................
EY898320       <-- ..................................................
EY900715       <-- ..................................................
EY940111       <-- ..................................................
EY913767       <-- AAGCAGAGGAGACCAAAGAAGCGGCTTGAAGGGCCATTTTTGGACAAAAC
EV541471       --> ..................................................
EV530993       --> ..................................................
EY896190       --> ..................................................

               1401   -   1451
UN23363        --> AGAGAGTGAGAGATAGCAATAGCAATGAAGAAGAAGACTACTGAAGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537178       <-- .................................................
EY898320       <-- .................................................
EY900715       <-- .................................................
EY940111       <-- .................................................
EY913767       <-- AGAGAGTGAGAGATAGCAATAGCAATGAAGAAGAAGACTACTGAAGTTC
EV541471       --> .................................................
EV530993       --> .................................................
EY896190       --> .................................................