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Alignment for radish unigene UN23381

               1      -     51
UN23381        --> GGAAAGAAATCTGGAACACTTTTGTGGTTTCGAAGCTTTGTTT-CTCCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY895352       <-- ............GGAACACTTTTGTGGTTTCGAAGCTTTGTTT-CTCCGT
FY452339       <-- ...............................GAAGCTTTGTTTTCTCCGT
EY935729       <-- ..................................................
EV546524       <-- ..................................................
EX898925       <-- ..................................................
EY918947       <-- ..................................................
EX909864       <-- ..................................................
EY910532       <-- ..................................................
FD545537       <-- ..................................................
EX776250       <-- ..................................................
FD953806       <-- ..................................................
FD936032       <-- ..................................................
FD547891       <-- ..................................................
EX889783       --> GGAAAGAAATCTGCAACACTTTGGTGGTTTCGAAGCTTTGTTTTCTCCGT
EV527232       --> ............GGAACACTTTTGTGGTTTCGAAGCTTTGTTT-CTCCGT
EY899624       --> ............GGAACACTTTTGTGGTTTCGAAGCTTTGTTT-CTCCGT
FD559973       --> ............GGAACACTTTTGTGGTTTCGAAGCTTTGTTTTCTCCGT
EV551428       --> .............GAACACTTTTGTGGTTTCGAAGCTTTGTTT-CTCCGT
EY923112       --> .............ggACACTTTTGTGGTTTCGAAGCTTTGTTT-CTCCGT
FD549480       --> .............ggACACTTTTGTGGTTTCGAAGCTTTGTTT-CTCCGT
FD940068       --> ...............ggACTTTTGTGGTTTCGAAGCTTTGTTT-CTCCGT
EW733606       --> .............................TCGAAGCTTTGTTTTCTCCGT
FD987246       --> .................................................g
EX763066       --> ..................................................
EY939875       --> ..................................................
FY434074       --> ..................................................
EY898111       --> ..................................................
EY914500       --> ..................................................
EX772255       --> ..................................................
FD534568       --> ..................................................
FD941225       --> ..................................................

               51     -    101
UN23381        --> CGCGAACGAACATGAAGATATCTCTCTTCCTTATCTCTTTCCTCATCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY895352       <-- CGCGAACGAACATGAAGATATCTCTCTTCCTTATCTCTTTCCTCATCCTC
FY452339       <-- CGCGAACGAACATGAAGATAACTCTCTTCCTTATCTCTTTCCTCATCCTC
EY935729       <-- .ggGAACGAACATGAAGATATCTCTCTTCCTTATCTCTTTCCTCATCCTC
EV546524       <-- .......GAACATGAAGATATCTCTCTTCCTTATCTCTTTCCTCATCCTC
EX898925       <-- ................................acCTCTTTCCTCATCCTC
EY918947       <-- ..................................................
EX909864       <-- ..................................................
EY910532       <-- ..................................................
FD545537       <-- ..................................................
EX776250       <-- ..................................................
FD953806       <-- ..................................................
FD936032       <-- ..................................................
FD547891       <-- ..................................................
EX889783       --> CGCGAACGAACATGAAGACCTCTCTCTTCCTCATCTCTTTCCTCATCCTC
EV527232       --> CGCGAACGAACATGAAGATATCTCTCTTCCTTATCTCTTTCCTCATCCTC
EY899624       --> CGCGAACGAACATGAAGATATCTCTCTTCCTTATCTCTTTCCTCATCCTC
FD559973       --> CGCGAACGAACATGAAGACCTCTCTCTTCCTCATCTCTTTCCTCATCCTC
EV551428       --> CGCGAACGAACATGAAGATATCTCTCTTCCTTATCTCTTTCCTCATCCTC
EY923112       --> CGCGAACGAACATGAAGATATCTCTCTTCCTTATCTCTTTCCTCATCCTC
FD549480       --> CGCGAACGAACATGAAGATATCTCTCTTCCTTATCTCTTTCCTCATCCTC
FD940068       --> CGCGAACGAACATGAAGATATCTCTCTTCCTTATCTCTTTCCTCATCCTC
EW733606       --> CGCGAACGAACATGAAGACCTCTCTCTTCCTCATCTCTTTCCTCATCCTC
FD987246       --> gGCGAACGAACATGAAGATATCTCTCTTCCTTATCTCTTTCCTCATCCTC
EX763066       --> .ggGAACGAACATGAAGATATCTCTCTTCCTTATCTCTTTCCTCATCCTC
EY939875       --> .ggGAACGAACATGAAGATATCTCTCTTCCTTATCTCTTTCCTCATCCTC
FY434074       --> .......................CTCTTCCT-ATCTCTTTCCTCATCCTC
EY898111       --> ..................................................
EY914500       --> ..................................................
EX772255       --> ..................................................
FD534568       --> ..................................................
FD941225       --> ..................................................

               101    -    151
UN23381        --> TTACCTCTCTCCCTACAAGATCCCAGTCCAGAAGTCAAAGCAGAAGTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY895352       <-- TTACCTCTCTCCCTACAAGATCCCAGTCCAGAAGTCAAAGCAGAAGTCAA
FY452339       <-- TTACCTCTCTCCCTACAAGATCCGAGTCCA-----------GAAGTCAAA
EY935729       <-- TTACCTCTCTCCCTACAAGATCCCAGTCCAGAAGTCAAAGCAGAAGTCAA
EV546524       <-- TTACCTCTCTCCCTACAAGATCCCAGTCCAGAAGTCAAAGCAGAAGTCAA
EX898925       <-- TTACCTCTCTCCCTACAAGATCCCAGTCCAGAAGTCAAAGCAGAAGTCAA
EY918947       <-- ...CCTCTCTCCCTACAAGATCCCAGTCCAGAAGTCAAAGCAGAAGTCAA
EX909864       <-- .............tacccctctccctacaagatccgagtcCAGAAGTCAA
EY910532       <-- ..............................................gCAA
FD545537       <-- ..................................................
EX776250       <-- ..................................................
FD953806       <-- ..................................................
FD936032       <-- ..................................................
FD547891       <-- ..................................................
EX889783       --> TTACCTCTCTCCCTACAAGATCCCAGTCCAGAAGTCAAAGCAGAAATCAA
EV527232       --> TTACCTCTCTCCCTACAAGATCCCAGTCCAGAAGTCAAAGCAGAAGTCAA
EY899624       --> TTACCTCTCTCCCTACAAGATCCCAGTCCAGAAGTCAAAGCAGAAGTCAA
FD559973       --> TTACCTCTCTCCTTACAAGATCCCAGTCCAGAAGTCAAAGCCGAAGTCAA
EV551428       --> TTACCTCTCTCCCTACAAGATCCCAGTCCAGAAGTCAAAGCAGAAGTCAA
EY923112       --> TTACCTCTCTCCCTACAAGATCCCAGTCCAGAAGTCAAAGCAGAAGTCAA
FD549480       --> TTACCTCTCTCCCTACAATATCCCAGTCCAGAAGTCAAAGCAGAAGTCAA
FD940068       --> TTACCTCTCTCCCTACAAGATCCCAGTCCAGAAGTCAAAGCAGAAGTCAA
EW733606       --> TTACCTCTCTCCCTACAAGATCCCAGTCCAGAAGTCAAAGCAGAAGTCAA
FD987246       --> TTACCTCTCTCCCTACAAGATCCCAGTCCAGAAGTCAAAGCAGAAGTCAA
EX763066       --> TTACCTCTCTCCCTACAAGATCCCAGTCCAGAAGTCAAAGCAGAAGTCAA
EY939875       --> TTACCTCTCTCCCTACAAGATCCCAGTCCAGAAGTCAAAGCAGAAGTCAA
FY434074       --> TTACCTCTCTCCCTACAAGATCCGAGTCCAGAAGTCAAA-C---------
EY898111       --> ...........................gCAGAAGTCAAAGCAGAAGTCAA
EY914500       --> ..............................................gCAA
EX772255       --> ..................................................
FD534568       --> ..................................................
FD941225       --> ..................................................

               151    -    201
UN23381        --> AGCACCGACTCGTGCTCACGCGGAGCTCACCAATCATGGTTTCCCGATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY895352       <-- AGCACCGACTCGTGCTCACGCGGAGCTCACCAATCATGGTTTCCCGATTG
FY452339       <-- -CCACCGACTCGTGCTCACGCGGAGCTCACGAGCCATGGTTTCCCGATTG
EY935729       <-- AGCACCGACTCGTGCTCACGCGGAGCTCACCAATCATGGTTTCCCGATTG
EV546524       <-- AGCACCGACTCGTGCTCACGCGGAGCTCACCAATCATGGTTTCCCGATTG
EX898925       <-- AGCACCGACTCGTGCTCACGCGGAGCTCACCAATCATGGTTTCCCGATTG
EY918947       <-- AGCACCGACTCGTGCTCACGCGGAGCTCACCAATCATGGTTTCCCGATTG
EX909864       <-- ACCACCGACTCGTGCTCACGCGGAGCTCACGAGCCATGGTTTCCCGATTG
EY910532       <-- AGCACCGACTCGTGCTCACGCGGAGCTCACCAATCATGGTTTCCCGATTG
FD545537       <-- .........TCGTGCTCACGCGGAGCTCACCAATCATGGTTTCCCGATTG
EX776250       <-- ..................................................
FD953806       <-- ..................................................
FD936032       <-- ..................................................
FD547891       <-- ..................................................
EX889783       --> AGCACCGACTCGTGCTCACGCGGAGCTCACCAATCATGGTTTCCCGATTG
EV527232       --> AGCACCGACTCGTGCTCACGCGGAGCTCACCAATCATGGTTTCCCGATTG
EY899624       --> AGCACCGACTCGTGCTCACGCGGAGCTCACCAATCATGGTTTCCCGATTG
FD559973       --> AGCACCGACTCGTGCTCACGCGGAGCTCACCAATCATGGTTTCCCTATTG
EV551428       --> AGCACCGACTCGTGCTCACGCGGAGCTCACCAATCATGGTTTCCCGATTG
EY923112       --> AGCACCGACTCGTGCTCACGCGGAGCTCACCAATCATGGTTTCCCGATTG
FD549480       --> AGCACCGACTCGTGCTCACGCGGAGCTCACCAATCATGGTTTCCCGATTG
FD940068       --> AGCACCGACTCGTGCTCACGCGGAGCTCACCAATCATGGTTTCCCGATTG
EW733606       --> AGCACCGACTCGTGCTCACGCGGAGCTCACCAATCATGGTTTCCCGATTG
FD987246       --> AGCACCGACTCGTGCTCACGCGGAGCTCACCAATCATGGTTTCCCGATTG
EX763066       --> AGCACCGACTCGTGCTCACGCGGAGCTCACCAATCATGGTTTCCCGATTG
EY939875       --> AGCACCGACTCGTGCTCACGCGGAGCTCACCAATCATGGTTTCCCGATTG
FY434074       --> --CACCGACTCGTGCTCACGCGGAGCTCACGAGCCATGGTTTCCCGATTG
EY898111       --> AGCACCGACTCGTGCTCACGCGGAGCTCACCAATCATGGTTTCCCGACTG
EY914500       --> AGCACCGACTCGTGCTCACGCGGAGCTCACCAATCATGGTTTCCCGATTG
EX772255       --> ..................................................
FD534568       --> ..................................................
FD941225       --> ..................................................

               201    -    251
UN23381        --> GTCTCCTCCCTCTATCCATCAAAGACTACTACATCAACAAAACCTCCGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY895352       <-- GTCTCCTCCCTCTATCCATCAAAGACTACTACATCAACAAAACCTCCGGC
FY452339       <-- GTCTCCTCCCTCTATCCGTCAAAGACTACTACATCAACAAAACCTCCGGC
EY935729       <-- GTCTCCTCCCTCTATCCATCAAGGACTACTACATCAACAAAACCTCCGGC
EV546524       <-- GTCTCCTCCCTCTATCCATCAAAGACTACTACATCAACAAAACCTCCGGC
EX898925       <-- GTCTCCTCCCTCTATCCATCAAAGACTACTACATCAACAAAACCTCCGGC
EY918947       <-- GTCTCCTCCCTCTATCCATCAAAGACTACTACATCAACAAAACCTCCGGC
EX909864       <-- GTCTCCTCCCTCTATCCGTCAAAGACTACTACATCAACAAAACCTCCGGC
EY910532       <-- GTCTCCTCCCTCTATCCATCAAAGACTACTACATCAACAAAACCTCCGGC
FD545537       <-- GTCTCCTCCCTCTATCCATCAAAGACTACTACATCAACAAAACCTCCGGC
EX776250       <-- ......gCCCTCTATCCATCAAAGACTACTACATCAACAAAACCTCCGGC
FD953806       <-- ..............................ACATCAACAAAACCTCCGGC
FD936032       <-- ..................................................
FD547891       <-- ..................................................
EX889783       --> GTCTCCTCCCTCTATCCATCAAAGACTACTACATCAACAAAACCTCCGGC
EV527232       --> GTCTCCTCCCTCTACCCATCAAAGACTACTACATCAACAAAACCTCCGGC
EY899624       --> GTCTCCTCCCTCTATCCATCAAAGACTACTACATCAACAAAACCTCCGGC
FD559973       --> GTCTCCTCCCTCTATCCGTCAAAGACTACTACATCAACAAAACCTCCGGC
EV551428       --> GTCTCCTCCCTCTATCCATCAAAGACTACTACATCAACAAAACCTCCGGC
EY923112       --> GTCTCCTCCCTCTATCCATCAAAGACTACTACATCAACAAAACCTCCGGC
FD549480       --> GTCTCCTCCCTCTATCCATCAAAGACTACTACATCAACAAAACCTCCGGC
FD940068       --> GTCTCCTCCCTCTATCCATCAAAGACTACTACATCAACAAAACCTCCGGC
EW733606       --> GTCTCCTCCCTCTATCCATCAAAGACTACTACATCAACAAAACCTCCGGC
FD987246       --> GTCTCCTCCCTCTATCCATCAAAGACTACTACATCAACAAAACCTCCGGC
EX763066       --> GTCTCCTCCCTCTATCCATCAAAGACTACTACATCAACAAAACCTCCGGC
EY939875       --> GTCTCCTCCCTCTATCCATCAAGGACTACTACATCAACAAAACCTCCGGC
FY434074       --> GTCTCCTCCCTCTATCCGTCAAAGACTACTACATCAACAAAACCTCCGGC
EY898111       --> GTCTCCTCCCTCTATCCATCAAAGACTACTACATCAACAAAACCTCCGGC
EY914500       --> GTCTCCTCCCTCTATCCATCAAAGACTACTACATCAACAAAACCTCCGGC
EX772255       --> ......gCCCTCTATCCATCAAAGACTACTACATCAACAAAACCTCCGGC
FD534568       --> .................ATCAAAGACTACTACATCAACAAAACCTCCGGC
FD941225       --> ..................................................

               251    -    301
UN23381        --> GACTTCTCCCTCTTCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY895352       <-- GACTTCTCCCTCTTCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA
FY452339       <-- GACTTCTCCCTCTTCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA
EY935729       <-- GACTTCTCCCTCTTCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA
EV546524       <-- GACTTCTCCCTCTTCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA
EX898925       <-- GACTTCTCCCTCTTCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA
EY918947       <-- GACTTCTCCCTCTTCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA
EX909864       <-- GACTTCTCCCTCTTCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA
EY910532       <-- GACTTCTCCCTCTTCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA
FD545537       <-- GACCTCTCCCTCTTCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA
EX776250       <-- GACTTCTCCCTCTTCCTCCACGGCACGTGTAAAATCACGCTTCCTCCCGA
FD953806       <-- GACTTCTCCCTCTTCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA
FD936032       <-- ...TTCTCCCTCATCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA
FD547891       <-- ..................................................
EX889783       --> GACTTCTCCCTCTTCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA
EV527232       --> GACTTCTCCCTCTTCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA
EY899624       --> GACTTCTCCCTCTTCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA
FD559973       --> GACTTCTCCCTCTTCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA
EV551428       --> GACTTCTCCCTCTTCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA
EY923112       --> GACTTCTCCCTCTTCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA
FD549480       --> GACCTCTCCCTCTTCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA
FD940068       --> GACTTCTCCCTCATCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA
EW733606       --> GACTTCTCCCTCTTCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA
FD987246       --> GACTTCTCCCTCTTCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA
EX763066       --> GACTTCTCCCTCTTCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA
EY939875       --> GACTTCTCCCTCTTCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA
FY434074       --> GACTTCTCCCTCTTCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA
EY898111       --> GACTTCTCCCTCTTCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA
EY914500       --> GACTTCTCCCTCTTCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA
EX772255       --> GACTTCTCCCTCTTCCTCCACGGCACGTGTAAAATCACGCTTCCTCCCGA
FD534568       --> GACTTCTCCCTCTTCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA
FD941225       --> ....gCTCCCTCTTCCTCCACGGCACGTGCAAAATCACGCTTCCTCCCGA

               301    -    351
UN23381        --> CAACTACCTCGCCACTTACTCCAACAAGGTAACGGGTCGGATCACCAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY895352       <-- CAACTACCTCGCCACTTACTCCAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus raphanistrum subsp. maritimus
FY452339       <-- CAACTACCTCGCCACTTACTCGAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus sativus cv GSK3-1
EY935729       <-- CAACTACCTCGCCACTTACTCGAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus sativus cv Early Scarlet Globe
EV546524       <-- CAACTACCTCGCCACTTACTCCAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX898925       <-- CAACTACCTCGCCACTTACTCGAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus sativus cv Early Scarlet Globe
EY918947       <-- CAACTACCTCTCCACTTACTCCAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus raphanistrum subsp. landra
EX909864       <-- CAACTACCTCGCCACTTACTCGAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus sativus cv Rat-Tail Radish #3870
EY910532       <-- CAACTACCTCGCCACTTACTCCAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545537       <-- CAACTACCTCGCCGCTTACTCCAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776250       <-- CAACTACCTCGCCACTTACTCGAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus raphanistrum subsp. landra
FD953806       <-- CAACTACCTCGCCACTTACTCGAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD936032       <-- CAACTACCTCGCCACTTACTCGAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus sativus var. oleiformis
FD547891       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX889783       --> CAACTACCTCGCCACTTACTCCAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus sativus var. oleiformis
EV527232       --> CAACTACCTCGCCACTTACTCCAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus raphanistrum subsp. maritimus
EY899624       --> CAACTACCTCGCCACTTACTCCAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus raphanistrum subsp. maritimus
FD559973       --> CAACTACCTCGCCACTTACTCCAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus raphanistrum subsp. landra
EV551428       --> CAACTACCTCGCCACTTACTCCAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923112       --> CAACTACCTCTCCACTTACTCCAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus raphanistrum subsp. landra
FD549480       --> CAACTACCTCGCCGCTTACTCCAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940068       --> CAACTACCTCGCCACTTACTCGAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus sativus var. oleiformis
EW733606       --> CAACTACCTCGCCACTTACTCCAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD987246       --> CAACTACCTCGCCACTTACTCGAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus raphanistrum subsp. landra
EX763066       --> CAACTACCTCGCCACTTACTCCAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939875       --> CAACTACCTCGCCACTTACTCGAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus sativus cv Early Scarlet Globe
FY434074       --> CAACTACCTCGCCACTTACTCGAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus sativus cv GSK3-1
EY898111       --> CAACTACCTCGCCACTTACTCCAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus raphanistrum subsp. maritimus
EY914500       --> CAACTACCTCGCCACTTACTCCAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772255       --> CAACTACCTCGCCACTTACTCGAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus raphanistrum subsp. landra
FD534568       --> CAACTACCTCGCCACTTACTCCAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus raphanistrum subsp. maritimus
FD941225       --> CAACTACCTCGCCACTTACTCGAACAAGGTAACGGGTCGGATCACCAAGG  Raphanus sativus var. oleiformis

               351    -    401
UN23381        --> GTCAGATCGCGGAGCTCCGTGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY895352       <-- GTCAGATCGCGGAGCTCCGTGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
FY452339       <-- GTCAGATCGCGGAGCTCCATGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
EY935729       <-- GTCAGATCGCGGAGCTCCGTGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
EV546524       <-- GTCAGATCGCGGAACTCCGTGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
EX898925       <-- GTTAGATCGCGGAGCTCCGTGGCATCCGGGTCAGAGCGTTTTTCCGGTGG
EY918947       <-- GTCAGATCGCGGAGCTCCGTGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
EX909864       <-- GTCAGATCGCGGAGCTCCATGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
EY910532       <-- GTCAGATCGCGGAGCTCCGTGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
FD545537       <-- GTCAGATCGCGGAGCTCCGTGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
EX776250       <-- GTCAGATCGCGGAGCTCCGTGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
FD953806       <-- GTCAGATCGCGGAGCTCCATGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
FD936032       <-- GTCAGATCGCGGAGCTCCGTGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
FD547891       <-- ..................................................
EX889783       --> GTCAGATCGCGGAGCTCCGTGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
EV527232       --> GTCAGATCGCGGAGCTCCGTGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
EY899624       --> GTCAGATCGCGGAGCTCCGTGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
FD559973       --> GTCAGATCGCGGAGCTCCGTGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
EV551428       --> GTCAGATCGCGGAACTCCGTGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
EY923112       --> GTCAGATCGCGGAGCTCCGTGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
FD549480       --> GTCAGATCGCGGAGCTCCGTGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
FD940068       --> GTCAGATCGCGGAGCTCCGTGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
EW733606       --> GTCAGATCGCGGAGCTCCGTGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
FD987246       --> GTCAGATCGCGGAGCTCCGTGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
EX763066       --> GTCAGATCGCGGAGCTCCGTGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
EY939875       --> GTCAGATCGCGGAGCTCCGTGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
FY434074       --> GTCAGATCGCGGAGCTCCATGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
EY898111       --> GTCAGATCGCGGAGCTCCGTGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
EY914500       --> GTCAGATCGCGGAGCTCCGTGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
EX772255       --> GTCAGATCGCGGAGCTCCGTGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
FD534568       --> GTCAGATCGCGGAGCTCCGTGGCATCCGGGTCAGAGCGTTTTTCCAGTGG
FD941225       --> GTCAGATCGCGGAGCTCCGTGGCATCCGGGTCAGAGCGTTTTTCCAGTGG

               401    -    451
UN23381        --> TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY895352       <-- TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
FY452339       <-- TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
EY935729       <-- TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
EV546524       <-- TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
EX898925       <-- TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
EY918947       <-- TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
EX909864       <-- TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
EY910532       <-- TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
FD545537       <-- TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
EX776250       <-- TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
FD953806       <-- TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
FD936032       <-- TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
FD547891       <-- ..................................................
EX889783       --> TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
EV527232       --> TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
EY899624       --> TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
FD559973       --> TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
EV551428       --> TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
EY923112       --> TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
FD549480       --> TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
FD940068       --> TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
EW733606       --> TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
FD987246       --> TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
EX763066       --> TGGTCCATCACCGGGATTCGATCCTCCGGTGATAGCCTTGTCTTCGAGGT
EY939875       --> TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
FY434074       --> TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
EY898111       --> TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
EY914500       --> TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
EX772255       --> TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
FD534568       --> TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT
FD941225       --> TGGTCCATCACCGGGATTCGATCCTCCGGTGATAACCTTGTCTTCGAGGT

               451    -    501
UN23381        --> CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY895352       <-- CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
FY452339       <-- CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
EY935729       <-- CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
EV546524       <-- CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
EX898925       <-- CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
EY918947       <-- CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
EX909864       <-- CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
EY910532       <-- CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
FD545537       <-- CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
EX776250       <-- CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
FD953806       <-- CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
FD936032       <-- CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
FD547891       <-- ..................................................
EX889783       --> CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
EV527232       --> CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
EY899624       --> CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
FD559973       --> CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
EV551428       --> CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
EY923112       --> CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
FD549480       --> CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
FD940068       --> CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
EW733606       --> CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
FD987246       --> CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
EX763066       --> CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAG--TCTTG
EY939875       --> CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
FY434074       --> CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
EY898111       --> CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
EY914500       --> CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
EX772255       --> CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
FD534568       --> CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG
FD941225       --> CGGCGTCGTAACCGCTAAATACCCTTCGAAGAACTTCGACGAGAGTCTTG

               501    -    551
UN23381        --> ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAATTCAAGAG-------A
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY895352       <-- ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAATTCAAGAG-------A
FY452339       <-- ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAGTTCAAGAG-------A
EY935729       <-- ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAATTCAAGAG-------A
EV546524       <-- ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAATTCAAGAG-------A
EX898925       <-- ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAATTCAAGAG-------A
EY918947       <-- ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAATTCAAGAG-------A
EX909864       <-- ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAGTTCAAGAG-------A
EY910532       <-- ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAATTCAAGAG-------A
FD545537       <-- ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAATTCAAGAG-------A
EX776250       <-- ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAATTCAAGAG-------A
FD953806       <-- ATTGTGAAGGGAAACGATTTTTTTCTTGATTCAGTTCAAGAG-------A
FD936032       <-- ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAATTCAAGAG-------A
FD547891       <-- .......................TCTTGATTCAATTCAAGAG-------A
EX889783       --> ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAATTCAAGAG-------A
EV527232       --> ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAATTCAAGAG-------A
EY899624       --> ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAATTCAAGAG-------A
FD559973       --> ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAATTCAAGAG-------A
EV551428       --> ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAATTCAAGAG-------A
EY923112       --> ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAATTCAAGAG-------A
FD549480       --> ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAATTCAAGAG-------A
FD940068       --> ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAATTCAAGAG-------A
EW733606       --> ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAATTCAAGAG-------A
FD987246       --> ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAATTCAAGAG-------A
EX763066       --> ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAATTCAAGAG-------A
EY939875       --> ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAATTCAAGAG-------A
FY434074       --> ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAGTTCAAGAG-------A
EY898111       --> ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAATTCAAGAG-------A
EY914500       --> ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAATTCAAGAG-------A
EX772255       --> ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAATTCAAGAG-------A
FD534568       --> ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAATTCAAGAGGTAAAAGA
FD941225       --> ATTGTGAAGGGAAACGATCTTCTTCTTGATTCAATTCAAGAG-------A

               551    -    601
UN23381        --> TCTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTACTTTGTAATATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY895352       <-- TCTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTACTTTGTAATATAT
FY452339       <-- TCTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTACTTTGTAATATAT
EY935729       <-- TCTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTACTTTGTAATATAT
EV546524       <-- TCTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTACTTTGTAATATAT
EX898925       <-- TCTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTACTTTGTAATATAT
EY918947       <-- TCTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTGTTTTGTAATATAT
EX909864       <-- TCTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTACTTTGTAATATAT
EY910532       <-- TCTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTACTTTGTAATATAT
FD545537       <-- TCTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTACTTTGTAGTATAT
EX776250       <-- TCTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTACTTTGTAATATAT
FD953806       <-- TCTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTACTTTGTAATATAT
FD936032       <-- TCTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTACTTTGTAATATAT
FD547891       <-- TGTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTACTTTGTAATATAT
EX889783       --> TCTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTACTTTGTAATATAT
EV527232       --> TCTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTACTTTGTAATATAT
EY899624       --> TCTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTACTTTGTAATATAT
FD559973       --> TCTGTGAAGCCAGGACAGGAGTAACAAGTGAAAGCTATTTTGTAATATAT
EV551428       --> TCTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTACTTTGTAATATAT
EY923112       --> TCTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTGTTTTGTAATATAT
FD549480       --> TCTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTACTTTGTAGTATAT
FD940068       --> TCTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTACTTTGTAATATAT
EW733606       --> TCTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTACTTTGTAATATAT
FD987246       --> TCTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTACTTTGTAATATAT
EX763066       --> TCTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTACTTTGTAATATAT
EY939875       --> TCTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTACTTTGTAATATAT
FY434074       --> TCTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTACTTTGTAATATAT
EY898111       --> TCTGTGAAGCCAGGACAGGAGCGACAAGTGAAAGCTACTTTGTAATATAT
EY914500       --> TCTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTACTTTGTAATATAT
EX772255       --> TCTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTACTTTGTAATATAT
FD534568       --> TCTGTGAAGCCA-GACAGGAGCAACAAGTGAAAGCTACTTTGTAATATAT
FD941225       --> TCTGTGAAGCCAGGACAGGAGCAACAAGTGAAAGCTACTTTGTAATATAT

               601    -    651
UN23381        --> TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATCTAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY895352       <-- TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATCTAAAC
FY452339       <-- TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATCTAAAC
EY935729       <-- TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATCTAAAC
EV546524       <-- TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATCTAAAC
EX898925       <-- TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATCTAAAC
EY918947       <-- TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATCTAAAC
EX909864       <-- TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATCTAAAC
EY910532       <-- TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATCTAAAC
FD545537       <-- TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATCTAAAC
EX776250       <-- TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATCTAAAC
FD953806       <-- TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATTTAAAC
FD936032       <-- TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATCTAAAC
FD547891       <-- TTATCTCCATCGGAAAAATAAAGCTTGTAATGTAAAAA............
EX889783       --> TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATCTAAAC
EV527232       --> TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATCTAAAC
EY899624       --> TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATCTAAAC
FD559973       --> TTA...............................................
EV551428       --> TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATCTAAAC
EY923112       --> TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATCTAAAC
FD549480       --> TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAA-CCGAATCTAAAC
FD940068       --> TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATCTAAAC
EW733606       --> TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATCTAAAC
FD987246       --> TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATCTAAAC
EX763066       --> TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATCTAAAC
EY939875       --> TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATCTAAAC
FY434074       --> TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATCTAAAC
EY898111       --> TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATCTAAAC
EY914500       --> TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATCTAAAC
EX772255       --> TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATCTAAAC
FD534568       --> TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATCTAAAC
FD941225       --> TTATCTCCATCCGAAAAATAAAGCTTGTAATGTAAAAACCGAATCTAAAC

               651    -    701
UN23381        --> CACTACTCTATTCTTGTATTCTCTGCAAACTAAGGGCTCAATGGAGTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY895352       <-- CACTACTCTATTCTTGTATTCTCTGCAAACTAAGGGCTCAATGGAGTCTT  Raphanus raphanistrum subsp. maritimus
FY452339       <-- CACTGCTCTATTCTTGTATTCTCTGCAAACTAAGGGCTCAATGGAGTCTT  Raphanus sativus cv GSK3-1
EY935729       <-- CACTGCTCTATTCTTGTATTCTCTGCAAACTAAGGGCTCAATGGAGTCTT  Raphanus sativus cv Early Scarlet Globe
EV546524       <-- CACTACTCTATTCTTGTATTCTCTGCAAACTAAGGGCTCAATGGAGTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX898925       <-- CACTGCTCTATTCTTGTATTCTCTGCAAACTAAGGGCTCAATGGAGTCTT  Raphanus sativus cv Early Scarlet Globe
EY918947       <-- CACTACTCTATTCTTGTATTCTCTGCAAACTAAGGGCTCAATGGAGTCTT  Raphanus raphanistrum subsp. landra
EX909864       <-- CACTGCTCTATTCTTGTATTCTCTGCAAACTAAGGACTCAATGGAGTCTT  Raphanus sativus cv Rat-Tail Radish #3870
EY910532       <-- CACTACTCTATTCTTGTATTCTCTGCAAACTAAGGGCTCAATGGAGTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545537       <-- CACTACTCTATTCTTGTATTCTCTGCAAACTAAGGGCTCAATGGAGTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776250       <-- CACTACTCTATTCTTGTATTCTCTGCAAACTAAGGGCTCAATGGAGTCTT  Raphanus raphanistrum subsp. landra
FD953806       <-- CACTGCTCTATTCTTGTATTCTCTGCAAACTAAGGGCTCAATGGAGTCTT  Raphanus sativus cv Rat-Tail Radish #3870
FD936032       <-- CACTGCTCTATTCTTGTATTCTCTGCAAACTAAGGGCTCAATGGAGTCTT  Raphanus sativus var. oleiformis
FD547891       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX889783       --> CACTACTCTATTCTTGTATTCTCTG.........................  Raphanus sativus var. oleiformis
EV527232       --> CACTACTCTATTCTTGTATTCTCTGCAAACTAAGGGCTCAATGGAGTCTT  Raphanus raphanistrum subsp. maritimus
EY899624       --> CACTACTCTATTCTTGTATTCTCTGCAAAC....................  Raphanus raphanistrum subsp. maritimus
FD559973       --> ..................................................  Raphanus raphanistrum subsp. landra
EV551428       --> CACTACTCTATTCTTGTATTCTCTGCAAACTAAGGGCTCAATGGAGTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923112       --> CACTACTCTATTCTTGTATTCTCTGCAAACTAAGG-CTCAATGGAGTCTT  Raphanus raphanistrum subsp. landra
FD549480       --> CACTACTCTATTCTTGTATTCTCTGCAAct....................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940068       --> CACTGCTCTATTCTTGTATTCTCTGCAAACTAAGG-CTCAATGGAGTCTT  Raphanus sativus var. oleiformis
EW733606       --> CACTACTCTATTCTTGTATTCTCTGCAAACTAAGG-CTCAATGGAGTCTT  Raphanus sativus cv Rat-Tail Radish #3870
FD987246       --> CACTACTCTATTCTTGTATTCTCTGCAAAC....................  Raphanus raphanistrum subsp. landra
EX763066       --> CACTACTCTATTCTTGTATTCTCTGCAAACTAAGGGCTCAATGGAGTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939875       --> CACTGCTCTATTCTTGTATTCTCTGCAAACTAAGGGCTCAATGGAGTCTT  Raphanus sativus cv Early Scarlet Globe
FY434074       --> CACTGCTCTATTCTTGTATTCTCTGCAAACTAAGGGCTCAATGGAGTCTT  Raphanus sativus cv GSK3-1
EY898111       --> CACTACTCTATTCTTGTATTCTCTGCAAACTAAGGGCTCAATGGAGTCTT  Raphanus raphanistrum subsp. maritimus
EY914500       --> CACTACTCTATTCTTGTATTCTCTGCAAACTAAGGGCTCAATGGAGTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772255       --> CACTACTCTATTCTTGTATTCTCTGCAAACTAAGGGCTCAATGGAGTCTT  Raphanus raphanistrum subsp. landra
FD534568       --> CACTACTCTATTCTTGTATTCTCTGCAAACTAAGGGCTCAATGGAGTCTT  Raphanus raphanistrum subsp. maritimus
FD941225       --> CACTGCTCTATTCTTGTATTCTCTGCAAACTAAGGGCTCAATGGAGTCTT  Raphanus sativus var. oleiformis

               701    -    751
UN23381        --> GCAAGTTGTGAACTAAGTATGGGTTAATG--------TGAGACTTTAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY895352       <-- GCAAGTTGTGAACTAAGTATGGGTTAATGACTTAATGTGAGACTTTAAAA
FY452339       <-- GCAAGTTGTGAACTAAGTATGGGTTAATG--------TGAGACTTTAAAA
EY935729       <-- GCAAGTTGTGAACTAAGTATGGGTTAATG--------TGAGACTTT....
EV546524       <-- GCAAGTTGTGAACTAAGTATGGGTTAATGacttaatgtg...........
EX898925       <-- GCAAGTTGTGAACTAAGTATGGGTTAATG--------TGAGACTTTAAAA
EY918947       <-- GCAAGTTGTGAACTAAGTATGGGTTAATGacttaatgtgagacttt....
EX909864       <-- GCAAGTTGTGAACTAAGTATGGGTTAATG--------TGAGACTTTAAAA
EY910532       <-- GCAAGTTGTGAACTAAGTATGGGTTAATGacttaatgtgagactttaaaa
FD545537       <-- GCAAGTCGTGAATTAAGTATGGGTTA........................
EX776250       <-- GCAAGTTGTGAACTAAGTATGGGTTAATG--------TGAGACTTTAAAA
FD953806       <-- GCAAGTTGTGAACTAAGTATGGGTTAATG--------TGAGACTTTAAAA
FD936032       <-- GCAAGTTGTGAACTAAGTATGGGTTAATG--------TGAGACTTT....
FD547891       <-- ..................................................
EX889783       --> ..................................................
EV527232       --> GCAAGTTGTAAACTAAGTAT..............................
EY899624       --> ..................................................
FD559973       --> ..................................................
EV551428       --> GCAAGTTGTGAACTAAGTATGGGTTAATGacttaatgtg...........
EY923112       --> GCAAGTTGTGAACTAAGTATGGGTTAATGacttaatgtgagacttt....
FD549480       --> ..................................................
FD940068       --> GCAAGTTGTGAACTAAGTATGGGTTAATG--------TGAGACTTTAAAA
EW733606       --> GCAAGTTGTGAACTAAGTATGGGTTAATGacttatgtgaga.........
FD987246       --> ..................................................
EX763066       --> GCAAGTTGTGAACTAAGTATGGGTTAATGact..................
EY939875       --> GCAAGTTGTGAACTAAGTATGGGTTAATG--------TGAGACTTT....
FY434074       --> GCAAGTTGTGAACTAAGTATGGGTTAATG--------TGAGACTTTAAAA
EY898111       --> GCAAGTTGTGAACTAAGTATGGGTTAATGacttaatgtgagacttt....
EY914500       --> GCAAGTTGTGAACTAAGTATGGGTTAATGacttaatgtgagactttaaaa
EX772255       --> GCAAGTTGTGAACTAAGTATGGGTTAATG--------TGAGACTTTAAAA
FD534568       --> GCAAGTTGTGAACTAAGTATGGGTTAATGacttaatgtgagactttaaaa
FD941225       --> GCAAGTTGTGAACTAAGTATGGGTTAATG--------TGAGACTTTAAAA

               751    -    801
UN23381        --> ACAAGCAAGAACCGTTTTATTTCTTTCCCTCCTGTGTCTCATTTACTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY895352       <-- ACAAGCAAGAACCATTTTATTTCTc.........................  Raphanus raphanistrum subsp. maritimus
FY452339       <-- ACAAGCAAGAACCGTTTTATTTCTTTCCCTCCTGTGTCTCATTTACTTCC  Raphanus sativus cv GSK3-1
EY935729       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV546524       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX898925       <-- ACAAGCAACAACCGTTTTAGTTCTTTCCCTCCTGTGTCTCATTTACTTCC  Raphanus sativus cv Early Scarlet Globe
EY918947       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX909864       <-- ACAAGCAAGAACCGTTTTATTTCTc.........................  Raphanus sativus cv Rat-Tail Radish #3870
EY910532       <-- acaagcg...........................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545537       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776250       <-- ACAAGCAAGAACCATTTTATTTCTcc........................  Raphanus raphanistrum subsp. landra
FD953806       <-- ACAAGCAAGAACCGTTTTATTTCTTTCCCTCCTGTGTCTCATTTACTTCC  Raphanus sativus cv Rat-Tail Radish #3870
FD936032       <-- ..................................................  Raphanus sativus var. oleiformis
FD547891       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX889783       --> ..................................................  Raphanus sativus var. oleiformis
EV527232       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY899624       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD559973       --> ..................................................  Raphanus raphanistrum subsp. landra
EV551428       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923112       --> ..................................................  Raphanus raphanistrum subsp. landra
FD549480       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940068       --> caaaa.............................................  Raphanus sativus var. oleiformis
EW733606       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD987246       --> ..................................................  Raphanus raphanistrum subsp. landra
EX763066       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939875       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY434074       --> ACAAGCAAGAACCGTTTTATTTCTTTCCCTCCTGTGTCTCATTTACTTCC  Raphanus sativus cv GSK3-1
EY898111       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY914500       --> a.................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772255       --> ACAAGCAAGAACCATTTTATTTCTcc........................  Raphanus raphanistrum subsp. landra
FD534568       --> a.................................................  Raphanus raphanistrum subsp. maritimus
FD941225       --> A.................................................  Raphanus sativus var. oleiformis

               801    -    851
UN23381        --> AGTTGTGGACCTTGTGGTACAAAGTACAAACTTTCGTTAAATGTATGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY895352       <-- ..................................................
FY452339       <-- AGTTGTGGACCTT.....................................
EY935729       <-- ..................................................
EV546524       <-- ..................................................
EX898925       <-- AGTTGTGGACCTTGTGGTACAAAGTACAAACTTTCGTTAAATGTATGGTG
EY918947       <-- ..................................................
EX909864       <-- ..................................................
EY910532       <-- ..................................................
FD545537       <-- ..................................................
EX776250       <-- ..................................................
FD953806       <-- AGTTGTGGACCTTGTGGTACAAAGTACAAACTTTCGTTAAATGTATGGTG
FD936032       <-- ..................................................
FD547891       <-- ..................................................
EX889783       --> ..................................................
EV527232       --> ..................................................
EY899624       --> ..................................................
FD559973       --> ..................................................
EV551428       --> ..................................................
EY923112       --> ..................................................
FD549480       --> ..................................................
FD940068       --> ..................................................
EW733606       --> ..................................................
FD987246       --> ..................................................
EX763066       --> ..................................................
EY939875       --> ..................................................
FY434074       --> AGTTGTGGACCTTGTGGTACAAAGTACAAACTTTCGTTAAATGTATGGTG
EY898111       --> ..................................................
EY914500       --> ..................................................
EX772255       --> ..................................................
FD534568       --> ..................................................
FD941225       --> ..................................................

               851    -    901
UN23381        --> AATCTTTCATTTC
                   ~~~~~~~~~~~~~
EY895352       <-- .............
FY452339       <-- .............
EY935729       <-- .............
EV546524       <-- .............
EX898925       <-- AATCTTTC.....
EY918947       <-- .............
EX909864       <-- .............
EY910532       <-- .............
FD545537       <-- .............
EX776250       <-- .............
FD953806       <-- AATCTTTCATTT.
FD936032       <-- .............
FD547891       <-- .............
EX889783       --> .............
EV527232       --> .............
EY899624       --> .............
FD559973       --> .............
EV551428       --> .............
EY923112       --> .............
FD549480       --> .............
FD940068       --> .............
EW733606       --> .............
FD987246       --> .............
EX763066       --> .............
EY939875       --> .............
FY434074       --> AATCTTTCATTTC
EY898111       --> .............
EY914500       --> .............
EX772255       --> .............
FD534568       --> .............
FD941225       --> .............