1      -     51
UN23405        --> GGAGAATACTTTTGCACAATGACAACGGCAATAGAACATTCCCCTTTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560798       <-- ............................................TTTTTA
EV526907       <-- ..................................................
EV538095       <-- ..................................................
FD561118       <-- ..................................................
FD577613       <-- ..................................................
EV549162       <-- ..................................................
EY922027       <-- ..................................................
FD978078       <-- ..................................................
FD949111       <-- ..................................................
EW718160       <-- ..................................................
FD540402       <-- ..................................................
EX905653       <-- ..................................................
EW721777       --> GGAGAATACTTTTGCACAATGACAACGGCAATAGAACATTCCCCTTTTTA
EY918070       --> .........................CGGCAATAGAACATTCCCCTTTTTA
EW737432       --> ..........................GGCAATAGAACATTCCCCTTTTTA
FD565132       --> ..........................GGCAATAGAACATTCCCCTTTTTA
FD581888       --> ..........................GGCAATAGAACATTCCCCTTTTTA
FD974393       --> .............................AATAGAACATTCCCTTTTTTA
EV544690       --> ................................AGAACATTCCCCTTTTTA
FD944799       --> ..................................................
EV542186       --> ..................................................
EX909342       --> ..................................................
FD565373       --> ..................................................
FD934783       --> ..................................................

               51     -    101
UN23405        --> AGCTTGTAAATAGAAGTTGATACATAACCGGCTGAGAACTAAATCACACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560798       <-- AGCTTGTAAATAGAAGTTGATACATAACCGGCTGAGAACTAAATCACACA
EV526907       <-- ..................................................
EV538095       <-- ..................................................
FD561118       <-- ..................................................
FD577613       <-- ..................................................
EV549162       <-- ..................................................
EY922027       <-- ..................................................
FD978078       <-- ..................................................
FD949111       <-- ..................................................
EW718160       <-- ..................................................
FD540402       <-- ..................................................
EX905653       <-- ..................................................
EW721777       --> AGCTTGTAAATAGAAGTTGATACATAACCGGCTGAAAACAAAATCACACA
EY918070       --> AGCTTGAAAATAGAAGTCGATACATAATCGACTGAGAACTAAATCACACA
EW737432       --> AGCTTGAAAATAGAAGTTGATACATAACCGACTGAGAACTAAATCACACA
FD565132       --> AGCTTGTAAATAGAAGTTGATACATAACCGGCTGAGAACTAAATCACACA
FD581888       --> AGCTTGAAAATAGAAGTTGATACATAACCGACTGAGAACTAAATCACACA
FD974393       --> AGCTTGTAAATAGAAGTTGATACATAACCGACTGAGAACTAAATCACACA
EV544690       --> AGCTTGTAAATAGAAGTTGATACATAACCGGCTGAGAACTAAATCACACA
FD944799       --> ..................GATACATAACCGGCTGAGAACAAAATCACACA
EV542186       --> .................................GAGAACTAAATCACACA
EX909342       --> ................................cGAGAACTAAATCACACA
FD565373       --> ..................................cGAACAAAATCACACA
FD934783       --> ..................................................

               101    -    151
UN23405        --> CATTTATTCATATTCCTAAGAACTTACAAAGCCGCAGAATAAATTATAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560798       <-- CATTTATTCATATTCCTAAGAACTTACAAAGCCGCAGAATAAATTATAGG
EV526907       <-- ..................AGAACTTACAAAGCCGCAGGATAAATTATAGG
EV538095       <-- ..................................................
FD561118       <-- ..................................................
FD577613       <-- ..................................................
EV549162       <-- ..................................................
EY922027       <-- ..................................................
FD978078       <-- ..................................................
FD949111       <-- ..................................................
EW718160       <-- ..................................................
FD540402       <-- ..................................................
EX905653       <-- ..................................................
EW721777       --> CATTTATTCATATTCCTAAGAACTTACAAAGCCGCAGAATAAATTATAGG
EY918070       --> CATTTATTCATATTCCTAAGAACTTACAAAGCCGCAGAATAAATTATAGG
EW737432       --> CATTTATTCATATTCCTAAGAACTTACAAAGCCACAGAATAAATTATAGG
FD565132       --> CATTTATTCATATTCCTAAGAACTTACAAAGCCGCAGAATAAATTATAGG
FD581888       --> CATTTATTCATATTCCTAAGAACTTACAAAGCCGCAGAATAAATTATAGG
FD974393       --> CATTTATTCATATTCCTAAGAACTTACAAAGCCGCAAAATAAATTATAGG
EV544690       --> CATTTATTCATATTCCTAAGAACTTACAAAGCCGCAGAATAAATTATAGG
FD944799       --> CATTTATTCATATTCCTAAGAACTTACAAAGCCGCAGAATAAATTATAGG
EV542186       --> CATTTATTCATATTCCTAAGAAATTACAAAGCCGCAGAATAAATTATAGG
EX909342       --> CATTTATTCATATTCCTAAGAACTTACAAAGCCGCAAAATAAATTATAGG
FD565373       --> CATTTATTCATATTCCTAAGAACTTACAAAGCCGCAAAATAAATTATAGG
FD934783       --> ...............................CCGCAGAATAAATTATAGG

               151    -    201
UN23405        --> AATCAAGATCGTTTACCAAAATTACAAGATCAATTACTGAACTTATCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560798       <-- AATGAAGATCGTTTACCAAAATTACAAGATCAATTACTGAACTTATCTCT
EV526907       <-- AATCAAGATCGTTCACCAAAATTACAAGATCAATTACTGAACTTATCTCT
EV538095       <-- ..................................................
FD561118       <-- ..................................................
FD577613       <-- ..................................................
EV549162       <-- ..................................................
EY922027       <-- ..................................................
FD978078       <-- ..................................................
FD949111       <-- ..................................................
EW718160       <-- ..................................................
FD540402       <-- ..................................................
EX905653       <-- ..................................................
EW721777       --> AATCAAGATCGTTTACCAAAATTACAAGATCAATTACTGAACTTATCTCT
EY918070       --> AATCAAGATCGTTTACCAAAATTACAAGATCAATCACTGA-CTTATCTCT
EW737432       --> AATGAAGATCGTTTACCAAAATTACAAGATCAATTACTGA-CTTATCTCT
FD565132       --> AATGAAGATCGTTTACCAAAATTACAAGATCAATTACTGAACTTATCTCT
FD581888       --> AATGAAGATCGTTTACCAAAATTACAAGATCAATTACTGA-CTTATCTCT
FD974393       --> AATCAAGATCGTTTACCAAAATTACAAGATCAATTACTGAACTTATCTCT
EV544690       --> AATGAAGATCGTTTACCAAAATTACAAGATCAATTACTGAACTTATCTCT
FD944799       --> AATCAAGATCGTTTACCAAAATTACAAGATCAATTACTGAACTTATCTCT
EV542186       --> AATCAAGATCGTTTACCAAAATTACAAGATCAATTACTGAACTTATCTCT
EX909342       --> AATGAAGATCGTTTACCAAAATTACAAGATCAATTACTGA-CTTATCTCT
FD565373       --> AATCAAGATCGTTTACCAAAATTACAAGATCAATTACTGAACTTATCTCT
FD934783       --> AATCAAGATCGTTTACCAAAATTACAAGATCAATTACTGAACTTATCTCT

               201    -    251
UN23405        --> GCCAGGTTT-AACTCACTTGTTGCCGGAGCAGAAACAGATTTCAGGACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560798       <-- GCCAGGTTT-AACTCACTTGTTGCCGGAGCAGAAACCGATTTCAGGACTC
EV526907       <-- GCCAGGTTT-AACTCACTTGTTGCCGGAGCAGAAACAGATTTCAGGGCTC
EV538095       <-- .....GTTT-A-CTCACTTGTTGCCGGAGCAGAAACAGATTTTAGGACTC
FD561118       <-- ..................................................
FD577613       <-- ..................................................
EV549162       <-- ..................................................
EY922027       <-- ..................................................
FD978078       <-- ..................................................
FD949111       <-- ..................................................
EW718160       <-- ..................................................
FD540402       <-- ..................................................
EX905653       <-- ..................................................
EW721777       --> GCCAGGTTT-AACTCACTTGTTGCCGGAGCAGTAACAGATTTCAGGACTC
EY918070       --> GCCAGGTTT-AACTCACTTGTTGCCGGAGCAGAAACCGATTTCAGGACTC
EW737432       --> GCCAGGTTT-AACTCACTTGTTGCCGGAGCAGAAACAGATTTCAGGACTC
FD565132       --> GCCAGGTTT-AACTCACTTGTTGCCGGAGCAAAAACCGATTTCAGGACTC
FD581888       --> GCCAGGTTT-AACTCACTTGTTGCCGGAGCAGAAACAGATTTCAGGACTC
FD974393       --> GCCAGGTTTTAACTCACTTGTTGCCGGAGCAAAAACAGATTTCAGGACTC
EV544690       --> GCCAGGTTT-AACTCACTTGTTGCCGGAGCAGAAACCGATTTCAGGACTC
FD944799       --> GCCAGGTTT-AACTCACTTGTTGCCGGAGCAGAAACAGATTTCAGGACTC
EV542186       --> GCCAGGTTT-AACTCACTTGTTGCCGGAGCAGAAACAGATTTTAGGACTC
EX909342       --> GCCAGGTTT-AACTCACTTGTTGCCGGAGCAAAAACAGATTTCAGGACTC
FD565373       --> GCCAGGTTT-AACTCACTTGTTGCCGGAGCAAAAACAGATTTCAGGACTC
FD934783       --> GCCAGGTTT-AACTCACTTGTTGCCGGAGCAGAAACAGATTTCAGGACTC

               251    -    301
UN23405        --> TGGCCCAGTTAGTATTCTCAGGCTACAAGTA-CAAACAAAGACTATGCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560798       <-- TGGCCCAGTTAGTATTCTCAGGCTACAAGTA-CAAACAAAGACCATGCCG
EV526907       <-- TCGCCCAGTTAGTATTCTCAGGCTACAAGTA-CAAACAAAGACTATGCCG
EV538095       <-- TGGCCCAGTTAGTATTCTCAGGCTACAAGTAACAAACAAAGACTAAGCCG
FD561118       <-- ..................................................
FD577613       <-- ..................................................
EV549162       <-- ..................................................
EY922027       <-- ..................................................
FD978078       <-- ..................................................
FD949111       <-- ..................................................
EW718160       <-- ..................................................
FD540402       <-- ..................................................
EX905653       <-- ..................................................
EW721777       --> TGGCCCAGTTAGTATTCTCAGGCTACAAGTA-CAAACAAAGACTATGCCG
EY918070       --> TGGCCCAGTTAGTATTCTCAGGCTACAAGTA-CAAACAAAGACTATGCCG
EW737432       --> TGGCCCAGTTAGTATTCTCAGGCTACAAGTA-CAAACAAAGACTATGCTG
FD565132       --> TGGCCCAGTTAGTATTCTCAGGCTACAAGTA-CAAACAAAGACCATGCCG
FD581888       --> TGGTCCAGTTAGTATTCTCAGGCTACAAGTA-CAAACAAAGACTATGCCG
FD974393       --> TGGCCCAGTTAGTATTCTCAGGCTACAAGGA-CAAACAAAGACCATGCCG
EV544690       --> TGGCCCAGTTAGTATTCTCAGGCTACAAGTA-CAAACAAAGACTATGCCG
FD944799       --> TGGCCCAGTTAGTATTCTCAGGCTACAAGTA-CAAACAAAGACTATGCCG
EV542186       --> TGGCCCAGTTAGTATTCTCAGGCTACAAGTAACAAACAAAGACTAAGCCG
EX909342       --> TGGCCCAGTTAGTATTCTCAGGCTACAAGTA-CAAACAAAGACTATGCCG
FD565373       --> TGGCCCAGTTAGTATTCTCAGGCTACAAGTA-CAAACAAAGACTATGCCG
FD934783       --> TGGCCCAGTTAGTATTCTCAGGCTACAAGTA-CAAACAAAGACTATGCCG

               301    -    351
UN23405        --> GTGTCTTCTTGTGACTTGTTGATCGATGATCCATAAAACTTGACTT-CAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560798       <-- GTGTCTTCTTGTGACTTGTTGATCGATGATCCATAAAACTTGACTT-CAA
EV526907       <-- GTGTCTTCTTGTGACTTGTTGATCGATGATCCATAAAACTTGACTT-CAA
EV538095       <-- GTGTCTTCTTGTGACTTGTTGATCGATGATCCATAAAACTTGACTTTCAA
FD561118       <-- .......................CGATGATCCATAAAACTTGACTT-CAA
FD577613       <-- ...........................GATCCATAAAACTTGACTT-CAA
EV549162       <-- ..................................................
EY922027       <-- ..................................................
FD978078       <-- ..................................................
FD949111       <-- ..................................................
EW718160       <-- ..................................................
FD540402       <-- ..................................................
EX905653       <-- ..................................................
EW721777       --> GTGTCTTCTTGTGACTTGTTGATCGATGATCCATAAAACTTGACTT-CAA
EY918070       --> GTGTCTTCTTGTGACTTGTTGATCAATGATCCATAAAACTTGACTT-CAA
EW737432       --> GTGCCTTCTTGTGACTTGTTGATCGATGATCCATAAAACTTGACTT-CAA
FD565132       --> GTGTCTTCTTGTGACTTGTTGATCGATGATCCATAAAACTTGACTT-CAA
FD581888       --> GTGTCTTCTTGTGACTTGTTGATCGATGATCCATAAAACTTGACTT-CAA
FD974393       --> GTGTCTTCTTGTGACTTGTTGATCGATGATCCATGAAACTTGACTT-CAA
EV544690       --> GTGTCTTCTTGTGACTTGTTGATCGATGATCCATAAAACTTGACTT-CAA
FD944799       --> GTGTCTTCTTGTGACTTGTTGATCGATGATCCATAAAACTTGACTT-CAA
EV542186       --> GTGTCTTCTTGTGACTTGTTGATCGATGATCCATAAAACTTGACTTTCAA
EX909342       --> GTGTCTTCTTGTGACTTGTTGATCGATGATCCATAAAACTTGACTT-CAA
FD565373       --> GTGTCTTCTTGTGACTTGTTGATCGATGATCCATAAAACTTGACTT-CAA
FD934783       --> GTGTCTTCTTGTGACTTGTTGATCGATGATCCATAAAACTTGACTT-CAA

               351    -    401
UN23405        --> GTTTCTCCTTTCTCTTCAACAACAAACTTCCCTTTTAAAGCTGGAGTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560798       <-- GTTTCTCCTTTCTCTTCAACAACAAACTTCCCTTTTAAAGCTGGAGTTTC
EV526907       <-- GTTTCTCCTTTCTCTTCAACACCAAACTTCCCTTTTAAAGCTGGAGTTTC
EV538095       <-- GTTTCTCCTTTCTCTTCAACAACAAACTTCCCTTTTAAAGCTGGAGTTTC
FD561118       <-- GTTTCTC-TTCCTCTTCAACAACAAACTTCCCTTTTAAAGCTGGAGTTTC
FD577613       <-- GTTTCTCCTTTCTCT-CAACAACAAACTTCCCTTTTAAAGCTGGAGTTTC
EV549162       <-- .....TCCTTTCTCTTCAACAACAAACTTCCCTTTTAAAGCTGGAGTTTC
EY922027       <-- ...........................cttCCTTTTAAAGCTGGAGTT-C
FD978078       <-- .........................................TGGAGTTTC
FD949111       <-- ..................................................
EW718160       <-- ..................................................
FD540402       <-- ..................................................
EX905653       <-- ..................................................
EW721777       --> GTTTCTCCTTTCTCTTCAACAACAAACTTCCCTTTTAAATCTGGAGTTTC
EY918070       --> GTTTCTCCTTTCTCTTCAACAACAAACTTCCCTTTTAAAGCTGGAGTTTC
EW737432       --> GTTTCTCCTTTCTCTTCAACAACAAACTTCCCTTTTAAAGCTGGAGTTTC
FD565132       --> GTTTCTCCTTTCTCTTCAACAACAAACTTCCCTTTTAAAGCTGGAGTTTC
FD581888       --> GTTTCTCCTTTCTCTTCAACAACAAACTTCCCTTTTAAAGCTGGAGTTTC
FD974393       --> GTTTCTCCTTTCTCTTCAACAACAAACTTCCCTTTTAAAGCTGGAGTTTC
EV544690       --> GTTTCTCCTTTCTCTTCAACAACAAACTTCCCTTTTAAAGCTGGAGTTTC
FD944799       --> GTTTCTCCTTTCTCTTCAACAACAAACTTCCCTTTTAAAGCTGGAGTTTC
EV542186       --> GTTTCTCCTTTCTCTTCAACAACAAACTTCCCTTTTAAAGCTGGAGTTTC
EX909342       --> GTTTCTCCTTTCTCTTCAACAACAAACTTCCCTTTTAAAGCTGGAGTTTC
FD565373       --> GTTTCTCCTTCCTCTTCAACAACAAACTTCCCTTTTAAAGCTGGAGTTTC
FD934783       --> GTTTCTCCTTTCTCTTCAACAACAAACTTCCCTTTTAAAGCTGGAGTTTC

               401    -    451
UN23405        --> CTTTTCGGCTTGTGCAAAAAAGTGTTTGGCTTTGTGTGCTACTTCAGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560798       <-- CTTTTCGGCTTGTGCAAAAAAGTGTTTGGCTTTGTGTGCTACTTCAGCTT
EV526907       <-- CTTTTCGGCTTGTGCAAAAAAGTGTTTGGCTTTGTGTGCTACTTCAGCTT
EV538095       <-- CTTTTCGGCTTGTGCAAAAAAGTGTTTGGCTTTGTGTGCTACTTCAGCTT
FD561118       <-- CTTTTCGGCTTGTGCAAAAAAGTGTTTGGCTTTGTGTGCTACTTCAGCTT
FD577613       <-- -TTTTCGGCTTGTGCAAAAAAGTGTTTGGCTTTGTGTGCTACTTCAGCTT
EV549162       <-- CTTTTCGGCTTGTGCAAAAAAGTGTTTGGCTTTGTGTGCTACTTCAGCTT
EY922027       <-- CTTTTCGGCTTGTGCAAAAAAGTGTTTGGCTTTGTGTGCTACTTCAGCTT
FD978078       <-- CTTTTCGGCTTGTGCAAAAA-GTGTT-GGCTTTGTGTGCTACTTCAGCTT
FD949111       <-- .......GCTTGTGCAAAAA-GTGTT-GGCTTTGTGTGCTACTTCAGCTT
EW718160       <-- ...................................GTGCTACTTCAGCTT
FD540402       <-- ..................................................
EX905653       <-- ..................................................
EW721777       --> CTTTTCGGCTTGTGCAAAAAAGTGTTTGGCTTTGTGTGCTACTTCAGCTT
EY918070       --> CTTTTCGGCTTGTGCAAAAAAGTGTTTGGCTTTGTGTGCTACTTCAGCTT
EW737432       --> CTTTTCGGCTTGTGCAAAAAAGTGTTTGGCTTTGTGTGCTACTTCAGCTT
FD565132       --> CTTTTCGGCTTGTGCAAAAAAGTGTTTGGCTTTGTGTGCTACTTCAGCTT
FD581888       --> CTTTTCGGCTTGTGCAAAAAAGTGTTTGGCTTTGTGTGCTACTTCAGCTT
FD974393       --> CTTTTCGGCTTGTGCAAAAAAGTGTTTGGCTTTGTGTGCTACTTCAGCTT
EV544690       --> CTTTTCGGCTTGTGCAAAAAAGTGTTTGGCTTTGTGTGCTACTTCAGCTT
FD944799       --> CTTTTCGGCTTGTGCAAAAAA.............................
EV542186       --> CTTTTCGGCTTGTGCAAAAAAGTGTTTGGCTTTGTGTGCTACTTCAGCTT
EX909342       --> CTTTTCGGCTTGTGCAAAAAAGTGTTTGGCTTTGTGTGCTACTTCAGCTT
FD565373       --> CTTTTCGGCTTGTGCAAAAAAGTGTTTGGCTTTGTGTGCTACTTCAGCTT
FD934783       --> CTTTTCGGCTTGTGCAAAAAAGTGTTTGGCTTTGTGTGCTACTTCAGCTT

               451    -    501
UN23405        --> CAAGAACAGCCTCCAGCATTAAATCAGATCCTTTTGCACTCTCT---TTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560798       <-- CAAGAACAGCCTCTAGCATTAAATCAGATCCTTTTGCACTCTCT---TTG  Raphanus sativus var. oleiformis
EV526907       <-- CAAGAACAGCCTCCAGCATTAAATCAGATCCTTTTGCACTCTCT---TTG  Raphanus raphanistrum subsp. maritimus
EV538095       <-- CAAGAAGAGCCTCCAGCATTAAATCAGATCCTTTTGCACTCTCT---TTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561118       <-- CAAGAACAGCCTCCAGCATTAAATCAGATCCTTTTGCACTCTCT---TTG  Raphanus sativus var. oleiformis
FD577613       <-- CAAGAACAGCCTCTAGCATTAAATCAGATCCTTTTGCACTCTCT---TTG  Raphanus sativus cv Rat-Tail Radish #3870
EV549162       <-- CAAGAACAGCCTCTAGCATTAAATCAGATCCTTTTGCACTCTCT---TTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922027       <-- CAAGAACAGCCTCCAGCATTAAATCAGATCCTTTTGCACTCTCT---TTG  Raphanus raphanistrum subsp. landra
FD978078       <-- CAAGTACAGC-TCTAGCATTAAATCAGATCCTTTTACACTATCT---TTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD949111       <-- CAAGAACAGC-TCCAGCATTAAATCAGATC-TTTTGCACTCTCT---TTG  Raphanus sativus cv Early Scarlet Globe
EW718160       <-- CAAGAACAGC-TCCAGCATTAAATCAGATC-TTTTGCACTCTCTGCTTTG  Raphanus sativus var. oleiformis
FD540402       <-- ........agCTCCAGCATTAAATCAGATCCTTTTGCACTCTCT---TTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX905653       <-- ................CATTAAATCAGATCCTTTTGCACTCTCT---TTG  Raphanus sativus cv Rat-Tail Radish #3870
EW721777       --> CAAGAACAGCCTCCAGCATTAAATCAGATCCTTTTGCACTCTCTGCTTTG  Raphanus sativus var. oleiformis
EY918070       --> CAAGAACAGCCTCCAGCATTAAATCAGATCCTTTTGCACTCTCT---TTG  Raphanus raphanistrum subsp. landra
EW737432       --> CAAGAACAGCCTCTAGCATTAAATCAGATCCTTTTGCACTCTCT---TTG  Raphanus sativus cv Rat-Tail Radish #3870
FD565132       --> CAAGAACAGCCTCTAGCATTAAATCAGATCCTTTTGCACTCTCT---TTG  Raphanus sativus var. oleiformis
FD581888       --> CAAGAACAGCCTCTAGCATTAAATCAGATCCTTTTGCACTCTCT---TTG  Raphanus sativus cv Rat-Tail Radish #3870
FD974393       --> CAAGTACAGCCTCTAGCATTAAATCAGATCCTTTTACACTATCT---TTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544690       --> CAAGAACAGCCTCTAGCATTAAATCAGATCCTTTTGCACTCTCT---TTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD944799       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV542186       --> CAAGAAGAGCCTCCAGCATTAAATCAGATCCTTTTGCACTCTCT---TTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX909342       --> CAAGAACAGCCCCTAGCATTAAATCAAATCCTTTTGCACTCTCT---TTG  Raphanus sativus cv Rat-Tail Radish #3870
FD565373       --> CAAGAACAGCCTCCAGCATTAAATCAAATCCTTTTGCACTCTCT---TTG  Raphanus sativus var. oleiformis
FD934783       --> CAAGAACAGCCTCCAGCATTAAATCAAATCCTTTTGCACTCTCT---TTG  Raphanus sativus var. oleiformis

               501    -    551
UN23405        --> CGATGAGGGAGCAACTTTGCCATCTCAGCAGAAACTGGAAGAACAGGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560798       <-- CGATGAGGGAGCAACTTTGCCATCTCAGCAGAAACTGGAAGAACAGGTGA  Raphanus sativus var. oleiformis
EV526907       <-- CGATGAGGGAGCAACTTTGCCATCTCAGCAGAAACTGGAAGAACAGGTGA  Raphanus raphanistrum subsp. maritimus
EV538095       <-- CGGTGAGGGAGCAACTTTGCCATCTCAGCAGAAACTGGAAGAACAGGTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561118       <-- CGATGAGGGAGCAACTTTGCCATCTCTGCAGAAACTGGAAGAACAGGTGA  Raphanus sativus var. oleiformis
FD577613       <-- CGATGAGGGAGCAACTTTGCCATCTCAGCAGAAACTGGAAGAACAGGTGA  Raphanus sativus cv Rat-Tail Radish #3870
EV549162       <-- CGATGAGGGAGCAACTTTGCCATCTCTACAGAAACTGGAAGAACAGGTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922027       <-- CGATGAGGGAGCAACTTTGCCATCTGAGCAGAAACTGGAAGAACAGGTGA  Raphanus raphanistrum subsp. landra
FD978078       <-- CGATGAGGGAGCAACTTTGCCATCTCTGCAGAAACTGGAAGAACAGGTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD949111       <-- TGATGAGGGAGCAACGTTGCCATCTCTGCAGAAACTGGAAGAACAGGTGA  Raphanus sativus cv Early Scarlet Globe
EW718160       <-- CGATGAGGGAGCAACTTTGCCATCTCTGCAGAAACTGGAAGAACAGGTGA  Raphanus sativus var. oleiformis
FD540402       <-- CGATGAGGGAGCAACTTTGCCATCTCAGCAGAAACTGGAAGAACAGGTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX905653       <-- CGATGAGG-AGCAACTTTGCCATCTCAGCAGAAACTGGAAGAACAGGTGA  Raphanus sativus cv Rat-Tail Radish #3870
EW721777       --> CGATGAGGGAGCAACTTTGCCATCTCTGCAGAAACTGGAAGAACAGGTGA  Raphanus sativus var. oleiformis
EY918070       --> CGATGAGGGAGCAACTTTGCCATCTGAGCAGAAACTGGAAGAACAGGTGA  Raphanus raphanistrum subsp. landra
EW737432       --> CGATGAGGGAGCAACTTTGCCATCTCAGCAGAAACTGGAAGAACAGGTGA  Raphanus sativus cv Rat-Tail Radish #3870
FD565132       --> CGATGAGGGAGCAACTTTGCCATCTCAGCAGAAACTGGAAGAACAGGTGA  Raphanus sativus var. oleiformis
FD581888       --> CGATGAGGGAGCAACTTTGCC.............................  Raphanus sativus cv Rat-Tail Radish #3870
FD974393       --> CGATGAGGGAGCAACTTTGCCATCTCTGCAGAAACTGGAAGAACAGGTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544690       --> CGATGAGGGAGCAACTTTGCCATCTCTACAGAAACTGGAAGAACAGGTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD944799       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV542186       --> CGGTGAGGGAGCAACTTTGCCATCTCAGCAGAAACTGGAAGAACAGGTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX909342       --> CGATGAGG-AGCAACTTTGCCATCTCAGCAAAAACTGGAAGAACAGGTGA  Raphanus sativus cv Rat-Tail Radish #3870
FD565373       --> CGATGAGGGAGCAACTTTGCCATCTCTGCAGAAACTGGAAGAACAGGTGA  Raphanus sativus var. oleiformis
FD934783       --> CG-TGAGGGAGCAACTTTGCCATCTCTGCAGAAACTGGAAGAACAGGTGA  Raphanus sativus var. oleiformis

               551    -    601
UN23405        --> ATCACTAGTTATAGTGTGAGTTTTGCCACTGACAGACTCAGATAAACGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560798       <-- ATCACTAGTTATAGTGTGAGTTCTGCCACTGACAGACTCAGATAAACGTT  Raphanus sativus var. oleiformis
EV526907       <-- ATCACTAGTTATAGTGTGAGTTCTGCCACTGACAGACTCAGATAAACGTT  Raphanus raphanistrum subsp. maritimus
EV538095       <-- ATCACTAGTTATAGTGTGAGTTTTGCCACTGACAGACTCAGATAAACGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561118       <-- ATCACTAGTTATAGTGTGAGTTTTGGCACTGACAGACTCAGATAAACGTT  Raphanus sativus var. oleiformis
FD577613       <-- GTCACTAGTTATAGCGTGAGTTTTGCCACTGACAGACTCAGATAAACGTT  Raphanus sativus cv Rat-Tail Radish #3870
EV549162       <-- ATCACTAGTTATAGTGTGAGTTCTGCCACTGACAGACTCAGATAAACGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922027       <-- ATCACTAGTTATAGTGTGAGTTCTGCCACTTACAGACTCAGATAAACGTT  Raphanus raphanistrum subsp. landra
FD978078       <-- ATCACTAGTTATAGTGTGAGTTTTGCCACTGACAGACTCGGATAAACGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD949111       <-- ATCACTAGTTATAGTGTGAGTTTTGGCACTGACAGACTCAGATAAACGTT  Raphanus sativus cv Early Scarlet Globe
EW718160       <-- ATCACTAGTTATAGTGTGAGTTTTGGCACTGACAGACTCAGATAAACGTT  Raphanus sativus var. oleiformis
FD540402       <-- ATCACTAGTTATAGTGTGAGTTTTGCCACTGACAGACTCAGATAAACGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX905653       <-- GTCACTAGTTATAGCGTGAGTTTTGCCACTGACAGACTCAGATAAACGTT  Raphanus sativus cv Rat-Tail Radish #3870
EW721777       --> ATCACTAGTTATAGTGTGAGTTTTGGCACTGACAGACTCAGATAAACGTT  Raphanus sativus var. oleiformis
EY918070       --> ATCACTAGTTATAGTGTGAGTTCTGCCACTTACAGACTCAGATAAACGTT  Raphanus raphanistrum subsp. landra
EW737432       --> GTCACTAGTTATAGCGTGAGTTTTGCCACTGACAGACTCAGATAAACGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD565132       --> ATCACTAGTTATAGTGTGAGTTCTGCCACTGACAGACTCAGATAAACGTT  Raphanus sativus var. oleiformis
FD581888       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD974393       --> ATCACTAGTTATAGTGTGAGTTTTGCCACTGACAGACTCGGATAAACGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544690       --> ATCACTAGTTATAGTGTGAGTTCTGCCACTGACAGACTCAGATAAACGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD944799       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV542186       --> ATCACTAGTTATAGTGTGAGTTTTGCCACTGACAGACTCAGATAAACGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX909342       --> GTCACTAGTTATAGCGTGAGTTTTGCCACTGACAGACTCAGATAAACGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD565373       --> ATCACTAGTTATAGTGTGAGTTTTGGCACTGACAGACTCAAATAAACGTT  Raphanus sativus var. oleiformis
FD934783       --> ATCACTAGTTATAGTGTGAGTTTTGGCACTGACAGACTCAGATAAACGTT  Raphanus sativus var. oleiformis

               601    -    651
UN23405        --> CAAACGCTGTTGCTTGGGCGTGCAGATTAACTGAAGCCGATGACGAACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560798       <-- CAAACGCTGTTGCTTGGGCGTGCAGATTAACTGAAGCCGATGACGAACCG  Raphanus sativus var. oleiformis
EV526907       <-- CAAACGCTGTTGTTTGGGCGTGCAGATTAACTGAAGCCGACGACGAACCA  Raphanus raphanistrum subsp. maritimus
EV538095       <-- CAAACGCTGTTGCTTGGGCGTGCAAATTAACTGAAGCCGATGACGAACCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561118       <-- CAAACGCTGTTGCTTGGGCGTGCAGATTAACTGAAGCTGATGACGAACCA  Raphanus sativus var. oleiformis
FD577613       <-- CAAACGCTGTTGCTTGGGCGTGCAGATTAACTGAAGCCGATGACGAACCG  Raphanus sativus cv Rat-Tail Radish #3870
EV549162       <-- CAAACGCTGTTGCTTGGGCGTGCAGATTAACTGAAGCCGATGACGAACCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922027       <-- CAAACGCTGTTGCTTGGGCGT--GGATTAACTGAAGCCGTTGACGAACCA  Raphanus raphanistrum subsp. landra
FD978078       <-- CAAACGCTGTTGCTTGGGCGTGCAAATTAACTGAAGCCGATGACGAACCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD949111       <-- CAAACGCTGTTGCTTGGGCGTGCAGATTAACTGAAGCTGATGACGAACCA  Raphanus sativus cv Early Scarlet Globe
EW718160       <-- CAAACGCTGTTGCTTGGGCGTGCAGATTAACTGAAGCTGATGACGAACCA  Raphanus sativus var. oleiformis
FD540402       <-- CAAACGCTGTTGCTTGGGCGTGCAAATTAACTGAAGCCGATGACGAACCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX905653       <-- CAAACGCTGTTGCTTGGGCGTGCAGATTAACTGGAGCCGATGACGAACCG  Raphanus sativus cv Rat-Tail Radish #3870
EW721777       --> CAAACGCTGTTGCTTGGGCGTGCAGATTAACTGAAGCTGATGACGAACCA  Raphanus sativus var. oleiformis
EY918070       --> CAAACGCTGTTGCTTGGGCGTG--GATTAACTGAAGCCGTTGACGAACCA  Raphanus raphanistrum subsp. landra
EW737432       --> CAAACGCTGTTGCTTGGGCGTGCAGATTAACTGAAGCCGATGACGAACCG  Raphanus sativus cv Rat-Tail Radish #3870
FD565132       --> CAAACGCTGTTGCTTGGGCGTGCAGATTAACTGAAGCCGATGACGAACCG  Raphanus sativus var. oleiformis
FD581888       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD974393       --> CAAACGCTGTTGCTTGGGCGTGCAAATTAACTGAAGCCGATGACGAACCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544690       --> CAAACGCTGTTGCTTGGGCGTGCAGATTAACTGAAGCCGATGACGAACCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD944799       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV542186       --> CAAACGCTGTTGCTTGGGCGTGCAAATTAACTGAAGCCGATGACGAACCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX909342       --> CAAACGCTGTTGCTTGGGCGTGCAGATTAACTGGAGCCGATGACGAACCG  Raphanus sativus cv Rat-Tail Radish #3870
FD565373       --> CAAACGCTGTTGCTTGGGCGTGCAGATTAACTGAAGCTGATGACGAACCA  Raphanus sativus var. oleiformis
FD934783       --> CAAACGCTGTTGCTTGGGCGTGCAGATTAACTGAAGCTGATGACGAACCA  Raphanus sativus var. oleiformis

               651    -    701
UN23405        --> CTAAACTCTTGAGCCTTTGTCCAATGATCTGCAACCTTGTGTCTTTCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560798       <-- CTAAACTCTTGAGCCTTTGTCCAATGATCTGCAACATTGTGTCTTTCCTC
EV526907       <-- CTAAACTCTTGAGCCTTTGTCCAATGATGTGCAACCTTGTGTCTTTCCTC
EV538095       <-- CTAAACTCTTGAGCCTTTGTCCAATGATCTGCAACCTTGTGTCTTTCCTC
FD561118       <-- CTAAACTCTCGAGCCTTTGTCCAATGATCTGCAACCTTGTGTCTTTCCTC
FD577613       <-- CTAAACTCTTGAGCCTTTGTCCAATGATCTGCAACCTTGTGTCTTTCCTC
EV549162       <-- CTAAACTCTTGAGCCTTTGTCCAATGATCTGCAACCTTGTGTCTTTCCTC
EY922027       <-- CTAAACTCTTGAGCCTTTGTCCAATGATCTGCAACCTTGTGTCTTTCCTC
FD978078       <-- CTAAACTCTTGAGCCTTTGTCCAATGATCTGCAACCTTGTGTCTTTCCTC
FD949111       <-- CTAAACTCTTGAGCCTTTGTCCAATGATCTGCAACCTTGTGTCTTTCCTC
EW718160       <-- CTAAACTCT-GAGCCTTTGTCCAATGATCTGCAACCTTGTGTCTTTCCTC
FD540402       <-- CTAAACTCTTGAGCCTTTGTCCAATGATCTGCAACCTTGTGTCTTTCCTC
EX905653       <-- CTAAACTCTTGAGCCTTTGTCCAATGATCTGCAACCTTGTGTCTTTCCTC
EW721777       --> CTAAACTCT-GAGCCTTTGTCCAATGATCTGCAACCTTGTGTCTTTCCTC
EY918070       --> CTAAACTCTTGAGCCTTTGTCCAATGATCTGCAACCTTGTGTCTTTCCTC
EW737432       --> CTAAACTCTTGAGCCTTTGTCCAATGATCTGCAACCTTGTGTCTTTCCTC
FD565132       --> CTAAACTCTTGAGCCTTTGTCCAATGATCTGCAACATTGTGTCTTTCCTC
FD581888       --> ..................................................
FD974393       --> CTAAACTCTTGAGCCTTTGTCCAATGATCTGCAACCTTGTGTCTTTCCTC
EV544690       --> CTAAACTCTTGAGCCTTTGTCCAATGATCTGCAACCTTGTGTCTTTCCTC
FD944799       --> ..................................................
EV542186       --> CTAAACTCTTGAGCCTTTGTCCAATGATCTGCAACCTTGTGTCTTTCCTC
EX909342       --> CTAAACTCTTGAGCCTTTGTCCAATGATCTGCAACCTTGTGTCTTTCCTC
FD565373       --> CTAAACTCTCGAGCCTTTGTCCAATGATCTGCAACCTTGTGTCTTTCCTC
FD934783       --> CTAAACTCTTGAGCCTTTGTCCAATGATCTGCAACCTTGTGTCTTTCCTC

               701    -    751
UN23405        --> AACACTGGGAGATGTAACAGTCCCATTGGTGGTTGTATTAGAAGATTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560798       <-- AACACTGGGAGATGTAACAGTCCCGTTGGTGGTTGTATTAGAAGAc....
EV526907       <-- AACATTGGGAGATGTAACAGTCCCATTGGTGGTTGTATTAGAAGATTCTG
EV538095       <-- AACATTGGGAGATGTAACAGTCCCATTGGTGGTTGTATTAGAAGATTCTG
FD561118       <-- AACACTGGGAGATGTAACAGTCCCATTGGTGGTTGTATTAGAAGATTCTG
FD577613       <-- AACACTGGGAGATGTAACAGTCCCATTGGTGGTTGTATTAGAAGATTCTG
EV549162       <-- AACACTGGGAGATGTAACAGTCCCATTGGTGGTTGTATTAGAAGATTCTG
EY922027       <-- AACAATGGGAGATGTAACAGTCCCATTGGTGGTTGTATTAGAAGATTCTG
FD978078       <-- AACACTGGGAGATGTAACAGTCCCATTGGTGGTTGTATTAGAAGATTCTG
FD949111       <-- AACACTGGGAGATGTAACAGTCCCATTGGTGGTTGTATTAGAAGATTCTG
EW718160       <-- AACACTGGGAGATGTAACAGTCCCATTGGTGGTTGTATTAGAAGATTCTG
FD540402       <-- AACAGTGGGAGATGTAACAGTCCCATTGGTGGTTGTATTAGAAGATTCTG
EX905653       <-- AACACTGGGAGATGTAACAGTCCCATTGGTGGTTGTATTAGAAGATTCTG
EW721777       --> AACACTGGGAGATGTAAC................................
EY918070       --> AACAATGGGAGATGTAACAGTCCCATTGGTGGTTGTATTAGAAGATTCTG
EW737432       --> AACACTGGGAGATGTAACAGTCCCATTGGTGGTTGTATTAGAAGATTCTG
FD565132       --> ..................................................
FD581888       --> ..................................................
FD974393       --> AACACTGGGAGATGTAAC................................
EV544690       --> AACACTGGGAGATGTAACAGTCCCATTGGTGGTTGTATTAGAAGATTCT.
FD944799       --> ..................................................
EV542186       --> AACATTGGGAGATGTAACAGTCCCATTGGTGGTTGTATTAGAAGATTCTG
EX909342       --> AACACTGGGAGATGTAACAGTCCCATTGGTGGTTGTATTAGAAGATTCTG
FD565373       --> AACACTGGGAGATGTAACAGTCCCATTGGTGGTTGTAT............
FD934783       --> AACACTGGGAGATGTAACAGTCCCATTGGTGGTTATATTAGAAGATTCTG

               751    -    801
UN23405        --> GAGAATGGTTGTCCACTCTTCGAGTCAAAGGATTGGAGTTAAAGAGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560798       <-- ..................................................  Raphanus sativus var. oleiformis
EV526907       <-- GAGAATGGTTGTCCACTCTCCGAGTCAAAGGATTGGAGTTAAAGAGAGAG  Raphanus raphanistrum subsp. maritimus
EV538095       <-- GAGAATGGTTGTCCACTCTTCGAGTCAAAGGATTGGAGTTAAAGAGAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561118       <-- GAGAATGGCTGTCCACTCTTCGAGTCAAAGGATTGGAGTTAAAGAGAGAG  Raphanus sativus var. oleiformis
FD577613       <-- GAGAATGGTTGTCTACTCTCCGAGTCAAAGGATTGGAGTTAAAGAGAGAG  Raphanus sativus cv Rat-Tail Radish #3870
EV549162       <-- GAGAATGGTTGTCCACTCTTCGAGTCAAAGGATTGGAGTTAAAGAGAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922027       <-- GAGAATGGTTGTCCACTCTTCGAGTCAAAGGATTGGAGTTAAAGAGAGAG  Raphanus raphanistrum subsp. landra
FD978078       <-- GAGAATGGTTGTCCACTCTTCGAGTCAAAGGATTGGAGTTAAAGAGGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD949111       <-- GAGAATGGCTGTCCACTCTTCGAGTCAAAGGATTGGAGTCAAAGAGAGAG  Raphanus sativus cv Early Scarlet Globe
EW718160       <-- GAGAATGGCTGTCCACTCTTCGAGTCAAAGGATTGGAGTTAAAGGGAGAG  Raphanus sativus var. oleiformis
FD540402       <-- GAGAATGGTTGTCTACTCTTCGGGTCAAAGGATTGGAGTTAAAGAGAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX905653       <-- GAGAATGGTTGTCTACTCTCCGAGTCAAAGGATTGGAGTTAAAGAGAGAG  Raphanus sativus cv Rat-Tail Radish #3870
EW721777       --> ..................................................  Raphanus sativus var. oleiformis
EY918070       --> GAGAATGGTTGTCCACTCTTCGAGTCAAAGGATTGGAGTTAAAGAGAGAG  Raphanus raphanistrum subsp. landra
EW737432       --> GAGAATGGTTGTCTACTCTc..............................  Raphanus sativus cv Rat-Tail Radish #3870
FD565132       --> ..................................................  Raphanus sativus var. oleiformis
FD581888       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD974393       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544690       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD944799       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV542186       --> GAGAATGGTTGTCCACTCTTCGAGTC........................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX909342       --> GAGAATGGTTGTCTACTCTCCGAGTCAAAGGATTGGAGTTAAAGAGAGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD565373       --> ..................................................  Raphanus sativus var. oleiformis
FD934783       --> GAGAATGGCTGTCCACTCTTCGAGTCAAAGGATTGGAGTTAAAGAGAGAG  Raphanus sativus var. oleiformis

               801    -    851
UN23405        --> AAACTTGCGCCATGGCTAATAGCATCAACTTGTGCTCGCAAATCTTGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560798       <-- ..................................................  Raphanus sativus var. oleiformis
EV526907       <-- AAACTTGCGCCATGGCTAATAGCATCAACTTGTGCTCGCAAATCTTGAAC  Raphanus raphanistrum subsp. maritimus
EV538095       <-- AAACTTGCTCCGTGGCTAATAGCATCAACTTGTGCTCGCAAATCTTGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561118       <-- AAACTTGCGCCATGGCTAATAGCATCAACTTGTGCTCGCAAATCTTGAAC  Raphanus sativus var. oleiformis
FD577613       <-- AAACTTGCGCCATGGCTAATAGCATCAACTTGTGCTCGCAAATCTTGAAC  Raphanus sativus cv Rat-Tail Radish #3870
EV549162       <-- AAACTTGCTCCATGGCTAATAGCATCAACTTGTGCTCGCAAATCTTGAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922027       <-- AAACTTGCTCCATGGCTAATAGCATCAACTTGTGCTCGCAAATCTTGAAC  Raphanus raphanistrum subsp. landra
FD978078       <-- AAACTTGCTCCATGGCTAATAGCATCAACTTGTGCTCGCAAATCTTGAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD949111       <-- AAACTTGCGCCATGGCTAATAGCATCAACTTGTGCTCGCAAATCTTGAAC  Raphanus sativus cv Early Scarlet Globe
EW718160       <-- AAACTTGCGCCATGGCTAATAGCATCAACTTGTGCTCGCAAATCTTGAAC  Raphanus sativus var. oleiformis
FD540402       <-- AAACTTGCTCCACGGCTAATAGCATCAACTTGTGCTCGCAAATCTTGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX905653       <-- AAGCTTGCGCCATGGCTAATAGCATCAACTTGTGCTCGCAAATCTTGAAC  Raphanus sativus cv Rat-Tail Radish #3870
EW721777       --> ..................................................  Raphanus sativus var. oleiformis
EY918070       --> AAACTTGCTCCATGGCTA-TAGCATCAACTTGTGCTCGCAAATCTTGAAC  Raphanus raphanistrum subsp. landra
EW737432       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD565132       --> ..................................................  Raphanus sativus var. oleiformis
FD581888       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD974393       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544690       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD944799       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV542186       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX909342       --> AAGCTT............................................  Raphanus sativus cv Rat-Tail Radish #3870
FD565373       --> ..................................................  Raphanus sativus var. oleiformis
FD934783       --> AAACTTGCGCCATGGCTAATAGCATCAACTTGTGCTCGCAAATCTTGAAC  Raphanus sativus var. oleiformis

               851    -    901
UN23405        --> TTCTTTCGAAATCTGCTGCATTTGAGGTTGTTTCATGACACCGTCTATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560798       <-- ..................................................
EV526907       <-- TTCTTTCGAAATCTGCTGCATTTGAGGTTGTTTCATGACACCGTCTATGT
EV538095       <-- TTCTTTCGAAATCTGCTGCATTTGAGGTTGTT--TTGACACCGTCTATGT
FD561118       <-- TTCTTTCGAAATCTGCTGCATTTGAGGTTGTTTCATGACACCGTCTATGT
FD577613       <-- TTCTTTCGAAATCTGCTGCATTTGAGGTTGTTTCATGACACCGTCTATGT
EV549162       <-- TTCTTTCGAAATCTGCTGCATTTGAGGTTGTTTCATGACACCGTCTATGT
EY922027       <-- TTCTTTCGAAATCTGCTGCATTTGAGGTTGTTTCATGACACCGTCTATGT
FD978078       <-- TTCTTTCGAAATCTGCTGCATTTGAGGTTGTTTCATGACACCGTCTATGT
FD949111       <-- TCCTTTCGAAATCTGCTGCATTTGAGGTTGTTTCATGACACCGTCTATGT
EW718160       <-- TTCTTTCGAAATCTGCTGCATTTGAGGTTGTTTCATGACACCGTCTATGT
FD540402       <-- TTCTTTCGAAATCTGCTGCATTTGAGGTTGTTTCATGACACCGTCTATGT
EX905653       <-- TTCTTTCGAAATCTGCTGCATTTGAGGTTGTTTCATGACACCGTCTATGT
EW721777       --> ..................................................
EY918070       --> TTCTTTCGAA-TCTGCTGCATTTGAG-TTGTT..................
EW737432       --> ..................................................
FD565132       --> ..................................................
FD581888       --> ..................................................
FD974393       --> ..................................................
EV544690       --> ..................................................
FD944799       --> ..................................................
EV542186       --> ..................................................
EX909342       --> ..................................................
FD565373       --> ..................................................
FD934783       --> TTCTTTCGAAATCTGCTGCATTTGAGGTTGTTTCATGACACCGTCTATGT

               901    -    951
UN23405        --> GGCCACGAGCCATTTGGATGTAACCAATCGCTCGTCCGAACAATCTTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560798       <-- ..................................................
EV526907       <-- GGCCACGAGCCc......................................
EV538095       <-- GGCCACGAGCCATTTGGATGTAACCAATCGCTCTTCCGAACAATCTTCCT
FD561118       <-- GGCCACGAGCCATTTGGATGTAACCAATCGCTCGTCCGAACAATCTTCCT
FD577613       <-- GGCCACGAGCCATTTGGATGTAACCAATCGCTCGTCCGAACAATCTTCCT
EV549162       <-- GGCCACGAGCCATTTGGATGTAACCAATCGCTCGTCCGAACAATCTTCCT
EY922027       <-- GGCCACGAGCCATTTGGATGTAACCAATCGCTCGTCCGAACAATCTTCCT
FD978078       <-- GGCCACGAGCCATTTGGATGTAACCAATCGCTCGTCCGAACAATCTTCCT
FD949111       <-- GGCCACGAGCCATTTGGATGTAACCAATCGCTCGTCCGAACAATCTTCCT
EW718160       <-- GGCCACGAGCCATTTGGATGTAACCAATCGCTCGTCCGAACAATCTTCCT
FD540402       <-- GGCCACGAGCCATTTGGATGTAACCAATCGCTCGTCCGAACAATCTTCCT
EX905653       <-- GGCCACGAGCCATTTGGATGTAACCAATCGCTCGTCCGAACAATCTTCCT
EW721777       --> ..................................................
EY918070       --> ..................................................
EW737432       --> ..................................................
FD565132       --> ..................................................
FD581888       --> ..................................................
FD974393       --> ..................................................
EV544690       --> ..................................................
FD944799       --> ..................................................
EV542186       --> ..................................................
EX909342       --> ..................................................
FD565373       --> ..................................................
FD934783       --> GGCCACGAGCCATTTGGATGTAACCAATCGCTCGTCCGA...........

               951    -   1001
UN23405        --> CCTGCTCTTGCGATTATCGGAAGATCCTTTGGCCCTACAACAGCAGCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560798       <-- ..................................................
EV526907       <-- ..................................................
EV538095       <-- CCTGCTCTTGCGATTATCGGAAGATCCTTTGGCCCTACAACAGCAGCTGT
FD561118       <-- CCTGCTCTTGCGATTATCGGAAGATCCTTTGGCCCTACAACAGCAGCTGT
FD577613       <-- CCTGCTCTTGCGATTATCGGAAGATCCTTCGGCCCTACAACAGCAGCTGT
EV549162       <-- CCTGCTCTTGCGATTATCAGAAGATCCTTTGGCCCTACAACAGCAGCTGT
EY922027       <-- CCTGCTCTTGAGATTATCGGAAGATCCTTTGGCCCTACAACAGCAGCTGT
FD978078       <-- CCTGCTCTTGCGATTATCGGAAGATCCTTTGGCCCTACAACAGCAGCTGT
FD949111       <-- CCTGCTCTTGCGATTATCGGAAGATCCTTTGGCCCTACAACAGCAGCTGT
EW718160       <-- CCTGCTCTTGCGATTATCGGAAGATCCTTTGGCCCTACAACAGCAGCTGT
FD540402       <-- CCTGCTCTTGCGATTATCGGAAGATCCTTTGGCCCTACAACAGCAGCTGT
EX905653       <-- CCTGCTCTTGCGATTATCGGAAGATCCTTCGGCCCTACAACAGCAGCTGT
EW721777       --> ..................................................
EY918070       --> ..................................................
EW737432       --> ..................................................
FD565132       --> ..................................................
FD581888       --> ..................................................
FD974393       --> ..................................................
EV544690       --> ..................................................
FD944799       --> ..................................................
EV542186       --> ..................................................
EX909342       --> ..................................................
FD565373       --> ..................................................
FD934783       --> ..................................................

               1001   -   1051
UN23405        --> TGCGCCGATGATTACTAAAATCTCACCGTAAGAGAGTCCCAGCATCGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560798       <-- ..................................................
EV526907       <-- ..................................................
EV538095       <-- TGCGCCGATGATTACTAAAATCTCACCGTAAGAGAGTCCCAGCATCGTTC
FD561118       <-- TGCGCCGATGATGACTAAAATCTCACCGTAAGAGAGTCCCAGCATCGTTC
FD577613       <-- TGCGCCGATGATTACTAAAATCTCACCGTAAGAGAGTCCCAGCATCGTTC
EV549162       <-- TGCGCCGATGATTACTAAAATCTCACCGTAAGAGAGTCCCAGCATCGTTC
EY922027       <-- TGCGCCGATGATTACTAAAATCTCACCGTAAGAGAGTCCCAGCATCGTTC
FD978078       <-- TGCACCGATGATTACTAAAATCTCACCGTAAGAGAGTCCCAGCATCGTTC
FD949111       <-- TGAGCCGATGATGACTAAAATCTCACCGTAAGAGAGTCCCAGCATCGTTC
EW718160       <-- TGCGCCGATGATGACTAAAATCTCACCGTAAGAGAGTCCCAGCATCGTTC
FD540402       <-- TGCGCCGATGATTACTAAAATCTCACCGTAAGAGAGTCCCAGCATCGTTC
EX905653       <-- TGCGCCGATGATTACTAAAATCTCACCGTAAGAGAGTCCCAGCATCGTTC
EW721777       --> ..................................................
EY918070       --> ..................................................
EW737432       --> ..................................................
FD565132       --> ..................................................
FD581888       --> ..................................................
FD974393       --> ..................................................
EV544690       --> ..................................................
FD944799       --> ..................................................
EV542186       --> ..................................................
EX909342       --> ..................................................
FD565373       --> ..................................................
FD934783       --> ..................................................

               1051   -   1101
UN23405        --> CTTTTTTCCGGCGTCTGATCCTCGGTTTCTCCTCTGTTCCCCTCGCCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD560798       <-- ..................................................
EV526907       <-- ..................................................
EV538095       <-- CTTTTTTCCGGCcc....................................
FD561118       <-- CTTTTTTCCGGCGTCTGATCCTCGGTTTCTCCTCTGTTCCC.........
FD577613       <-- CTTTTT-CCGGCGTCTGTTCCTCtcgccgtcttccc..............
EV549162       <-- CTTTTT-CCGGCGTCTGATCCTCGGTTTCTCCCCTGTTCCCCTCGCCGTC
EY922027       <-- CTTTTT-CCGGCGTCTGATCCTCGGTTTCTCCCCTGTTCCCCTCGCCGTC
FD978078       <-- CTTTTTTCCGGCGTCTGATCCTCGGTTTCTCCTCTGTTCCTCTCGCCGTC
FD949111       <-- CTTTTTTCCGGCGTCTGATCCTCGGTTTCTCCTCTGTTCCC.........
EW718160       <-- CTTTTTTCCGGCGTCTGATCCTCGGTTTCTCCTCTGTTCCTCTCGCCGTC
FD540402       <-- CTTTTTTCCGGCGTCTGATCCTCGGTTTCTCCTCTGTTCCC.........
EX905653       <-- CTTTTT-CCGGCcc....................................
EW721777       --> ..................................................
EY918070       --> ..................................................
EW737432       --> ..................................................
FD565132       --> ..................................................
FD581888       --> ..................................................
FD974393       --> ..................................................
EV544690       --> ..................................................
FD944799       --> ..................................................
EV542186       --> ..................................................
EX909342       --> ..................................................
FD565373       --> ..................................................
FD934783       --> ..................................................

               1101   -   1151
UN23405        --> TTCGGTGAAGGAGACATCTCC
                   ~~~~~~~~~~~~~~~~~~~~~
FD560798       <-- .....................
EV526907       <-- .....................
EV538095       <-- .....................
FD561118       <-- .....................
FD577613       <-- .....................
EV549162       <-- TTCGGTGtcc...........
EY922027       <-- TTCGGTGtcc...........
FD978078       <-- TTCGGTGAAGGAGACATCTCC
FD949111       <-- .....................
EW718160       <-- TTCGGTGAAGGAGACcc....
FD540402       <-- .....................
EX905653       <-- .....................
EW721777       --> .....................
EY918070       --> .....................
EW737432       --> .....................
FD565132       --> .....................
FD581888       --> .....................
FD974393       --> .....................
EV544690       --> .....................
FD944799       --> .....................
EV542186       --> .....................
EX909342       --> .....................
FD565373       --> .....................
FD934783       --> .....................