RadishBase

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Alignment for radish unigene UN23418

               1      -     51
UN23418        --> GGAGATTAATTAGAGACCAAAT-AAAAAAA-TGGGAGAGACAGAGGAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531105       <-- ..gGATTAATTAGAGACCAAAT-AAAAAAA-TGGGAGAGACAGAGGAAGT
EX906734       <-- ..................................................
EV546971       <-- ..................................................
EW719842       <-- ..................................................
FD552449       <-- ..................................................
EV572200       <-- ..................................................
EY909717       <-- ..................................................
FD961322       <-- ..................................................
EY935861       <-- ..................................................
FD577574       --> GGAGATTAATTAGAGACCAAAT-AAAAAAA-TGGGAGAGACAGAGGAAGT
FD965633       --> GGAGATTAATTAGAGACCAAAT-AAAAAAA-TGGGAGAGACAGAGGAAGT
EV526692       --> .ggGATTAATTAGAGACCAAAT-AAAAAAA-TGGGAGAGACAGAGGAAGT
EV539034       --> .....ggAATTAGAGACCAAAT-AAAAAAA-TGGGAGAGACAGAG-AAGT
EV551965       --> .....ggAATTAGAGACCAAAT-AAAAAAA-TGGGAGAGACAGAGGAAGT
EW715170       --> .....ggAATTAGAGACCAAAT-AAAAAAAATGGGAGAGACAGAGGAAGT
EV567222       --> .........ggAGAGACCAAATTAAAAAAA-TGGGAGAGACAGAGGAAGT
EX902460       --> .........ggAGAGACCAAAT-AAAAAAA-TGGGAGAGACAGAGGAAGT
FD556086       --> ..........gAGAGACCAAATTAAAAAAA-TGGGAGAGACAGAGGAAGT
EY913497       --> ..................................................
EY940035       --> ..................................................

               51     -    101
UN23418        --> GAAACTGTTGGGAGTATGGTTCAGTCCGTATGCCATAAGACCAAAGATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531105       <-- GAAACTGTTGGGAGTATGGTTCAGTCCGTATGCCATAAGACCAAAGATCG
EX906734       <-- .AAACTGTTGGGAGT-TGTTTCAGTCCGTATGTCACAAGACCAAAGATCG
EV546971       <-- ..............................TGCCATAAGACCAAAGATCG
EW719842       <-- ..................................................
FD552449       <-- ..................................................
EV572200       <-- ..................................................
EY909717       <-- ..................................................
FD961322       <-- ..................................................
EY935861       <-- ..................................................
FD577574       --> GAAACTGTTGGGAGTATGGTTCAGTCCGTATGCCACAAGACCAAAGATCG
FD965633       --> GAAACTGTTGGGAGTATGGTTCAGTCCGTATGCCATAAGACCAAAGATCG
EV526692       --> GAAACTGTTGGGAGTATGGTTCAGTCCGTATGCCATAAGACCAAAGATCG
EV539034       --> GAAATTGTTGGGAGTATGGTTCAGTCCGTATGCCATAAGACCAAAGATCG
EV551965       --> GACACTGTTGGGAGTATGGTTCAGTCCGTATGCCATAAGACCAAAGATCG
EW715170       --> GAAACTGTTGGGAGTATGGTTCAGTCCGTACGCCATAAGACCAAAGATCG
EV567222       --> GAAACTGTTGGGAGTATGGTTCAGTCCGTACGCCATAAGACCAAAGATCG
EX902460       --> GAAACTGTTGGGAGTATGTTTCAGTCCGTATGTCACAAGACCAAAGATCG
FD556086       --> GAAACTGTTGGGAGTATGGTTCAGTCCGTACGCCATAAGACCAAAGATCG
EY913497       --> ..................................................
EY940035       --> ..................................................

               101    -    151
UN23418        --> CTCTTCGTCTCAAGTCAGTCGATTATGATTACTTTGAAGAAGATCTGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531105       <-- CTCTTCGTCTCAAGTCAGTCGATTATGATTACTTTGAAGAAGATCTGTTC  Raphanus raphanistrum subsp. maritimus
EX906734       <-- CTCTTCGTCTCAAATCAGTCGATTATGATTACTTTGAAGAAGATCTGTTC  Raphanus sativus cv Rat-Tail Radish #3870
EV546971       <-- CTCTTCGTCTCAAATCAGTCGATTATGATTACTTTGAAGAAGATCTGTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719842       <-- .....................ATTATGATTACTTTGAAGAAGATCTGTTC  Raphanus sativus var. oleiformis
FD552449       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV572200       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY909717       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961322       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY935861       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD577574       --> CTCTTCGTCTCAAATCAGTCGATTATGATTACTTTGAAGAAGATCTGTTC  Raphanus sativus cv Rat-Tail Radish #3870
FD965633       --> CTCTTCGTCTCAAGTCAGTCGATTATTATTACTTTGAAGAAGATCTGTTC  Raphanus raphanistrum subsp. maritimus
EV526692       --> CTCTTCGTCTCAAGTCAGTCGATTATGATTACTTTGAAGAAGATCTGTTC  Raphanus raphanistrum subsp. maritimus
EV539034       --> CTCTTCTTCTCAAGTCAGTCGATTATGATTACTTTGAAGAAGATCTGTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551965       --> CTCTTCGTCTCAAATCAGTCGATTATGATTACTTTGAAGAAGATCTGTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715170       --> CTCTTCGTCTCAAGTCAGTCGATTATGATTACTTTGAAGAAGATCTGTTC  Raphanus sativus var. oleiformis
EV567222       --> CTCTTCGTCTCAAGTCAGTCGATTATGATTACTTTGAAGAGGATCTGTTC  Raphanus raphanistrum subsp. landra
EX902460       --> CTCTTCGTCTCAAATCAGTCGATTATGATTACTTTGAAGAAGATCTGTTC  Raphanus sativus cv Rat-Tail Radish #3870
FD556086       --> CTCTTCGTCTCAAGTCAGTCGATTATGATTACTTTGAAGAAGATCTGTTC  Raphanus raphanistrum subsp. landra
EY913497       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940035       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               151    -    201
UN23418        --> GGTTCCAAGAGTGAGCTTCTTCTCAAATCAAATCCGGTTCACAAGAAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531105       <-- GGTTCCAAGAGTGAGCTTCTTCTCAAATCAAATCCGGTTCACAAGAAAGT
EX906734       <-- GGTTCCAAGAGTGAGCTTCTTCTCAAATCAAATCCGGTTCACAAGAAAGT
EV546971       <-- GGTTCCAAGAGTGAGTTTCTTCTCAAATCAAATCCGGTTCACAAGAAAGT
EW719842       <-- GGTTCCAAGAGTGAGCTTCTTCTCAAATCAAATCCAGTTCACAAGAAAGT
FD552449       <-- ..................................................
EV572200       <-- ..................................................
EY909717       <-- ..................................................
FD961322       <-- ..................................................
EY935861       <-- ..................................................
FD577574       --> GGTTCCAAGAGTGAGCTTCTTCTCAAATCAAATCCGGTTCACAAGAAAGT
FD965633       --> GGTTCCAAGAGTGAGCTTCTTCTCAAATCAAATCCGGTTCACAAGAAAGT
EV526692       --> GGTTCCAAGAGTGAGCTTCTTCTCAAATCAAATCCGGTTCACAAGAAAGT
EV539034       --> GGTTCCAAGAGTGAGCTTCTTCTCAAATCAAATCCGGTTCACAAGAAAGT
EV551965       --> GGTTCCAAGAGTGAGTTTCTTCTCAAATCAAATCCGGTTCACAAGAAAGT
EW715170       --> GGTTCCAAGAGTGAGCTTCTTCTCAAATCAAATCCAGTTCACAAGAAAGT
EV567222       --> GGTTCCAAGAGTGAGCTTCTTCTCAAATCAAATCCGGTTCACAAGAAAGT
EX902460       --> GGTTCCAAGAGTGAGCTTCTTCTCAAATCAAATCCGGTTCACAAGAAAGT
FD556086       --> GGTTCCAAGAGTGAGCTTCTTCTCAAATCAAATCCGGTTCACAAGAAAGT
EY913497       --> ..................................................
EY940035       --> ..................................................

               201    -    251
UN23418        --> CCCGGTTCTCATCCACAACAACAAACCGATTCTAGAGTCTCTCAACATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531105       <-- CCCCGTTCTCATCCACAACAACAAACCGATTCTAGAGTCTCTCAACATCG
EX906734       <-- CCCGGTTCTCATCCACAACAAGAAACCGATTCTAGAGTCTCTCAACATCG
EV546971       <-- CCCGGTTCTCATCCACAACAACAAACCGATTCTAGAGTCTCTCAACATCG
EW719842       <-- CCCGGTTCTCATCCACAACAACAAACCGATTCTAGAGTCTCTCAACATCG
FD552449       <-- ...........TCCACAACAACAAACCGATTCTAGAGTCTCTCAACATCG
EV572200       <-- ..................................................
EY909717       <-- ..................................................
FD961322       <-- ..................................................
EY935861       <-- ..................................................
FD577574       --> CCCGGTTCTCATCCACAACAAGAAACCGATTCTAGAGTCTCTCAACATCG
FD965633       --> CCCCGTTCTCATCCACAACAACAAACCGATTCTAGAGTCTCTCAACATCG
EV526692       --> CCCCGTTCTCATCCACAACAACAAACCGATTCTAGAGTCTCTCAACATCG
EV539034       --> CCCGGTTCTCATCCACAACAACAAACCGATTCTAGAGTCTCTCAACATCG
EV551965       --> CCCGGTTCTCATCCACAACAACAAACCGATTCTAGAGTCTCTCAACATCG
EW715170       --> CCCGGTTCTCATCCACAACAACAAACCGATTCTAGAGTCTCTCAACATCG
EV567222       --> CCCGGTTCTCATCCACAACAACAAACCGATTCTAGAGTCTCTCAACATCG
EX902460       --> CCCGGTTCTCATCCACAACAAGAAACCGATTCTAGAGTCTCTCAACATCG
FD556086       --> CCCGGTTCTCATCCACAACAACAAACCGATTCTAGAGTCTCTCAACATCG
EY913497       --> ..................................................
EY940035       --> ..................................................

               251    -    301
UN23418        --> TTGAGTACATTGATGAGACATGGCACGCATCTGGACCGTCCATACTTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531105       <-- TTGAGTACATTGATGAGACATGGCACGCATCTGGACCGTCCATACTTCCT  Raphanus raphanistrum subsp. maritimus
EX906734       <-- TTGAGTACATTGATGAGACATGGCACGCATCTGGACCGTCCATACTTCCT  Raphanus sativus cv Rat-Tail Radish #3870
EV546971       <-- TTGAGTACATTGATGAGACATGGCACGCATCTGGACCGTCCATACTTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719842       <-- TTGAGTACATTGATGAGACATGGAGCGCATCTGGACCGTCCATACTTCCT  Raphanus sativus var. oleiformis
FD552449       <-- TTGAGTACATTGATGAGACATGGAGCGCATCTGGACCGTCCATACTTCCT  Raphanus raphanistrum subsp. landra
EV572200       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY909717       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961322       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY935861       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD577574       --> TTGAGTACATTGATGAGACATGGCACGCATCTGGACCGTCCATACTTCCT  Raphanus sativus cv Rat-Tail Radish #3870
FD965633       --> TTGAGTACATTGATGAGACATGGCACGCATCTGGACCGTCCATACTTCCT  Raphanus raphanistrum subsp. maritimus
EV526692       --> TTGAGTACATTGATGAGACATGGCACGCATCTGGACCGTCCATACTTCCT  Raphanus raphanistrum subsp. maritimus
EV539034       --> TTGAGTACATTGATGAGACATGGAACGCATCTGGACCGTCCATACTTCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551965       --> TTGAGTACATTGATGAGACATGGCACGCATCTGGACCGTCCATACTTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715170       --> TTGAGTACATTGATGAGACATGGAGCGCATCTGGACCGTCCATACTTCCT  Raphanus sativus var. oleiformis
EV567222       --> TTGAGTACATTGATGAGACATGGAGCGCATCTGGACCGTCCATACTTCCT  Raphanus raphanistrum subsp. landra
EX902460       --> TTGAGTACATTGATGAGACATGGCACGCATCTGGACCGTCCATACTTCCT  Raphanus sativus cv Rat-Tail Radish #3870
FD556086       --> TTGAGTACATTGATGAGACATGGAGCGCATCTGGACCGTCCATACTTCCT  Raphanus raphanistrum subsp. landra
EY913497       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940035       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               301    -    351
UN23418        --> TCACATCCCTATGATCGCGCTCAAGCTCGCTTCTGGTCTGCCTTCGTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531105       <-- TCACATCCCTATGATTGCGCTCAAGCTCGCTTCTGGTCTGCCTTCGTTGA  Raphanus raphanistrum subsp. maritimus
EX906734       <-- TCACATCCCTATGATCGCGCTCAAGCTCGCTTCTGGTCTGCCTTCGTTGA  Raphanus sativus cv Rat-Tail Radish #3870
EV546971       <-- TCACATCCCTATGATCGCGCTCAAGCTCGCTTCTGGTCTGCCTTCGTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719842       <-- TCACATCCCCATGATCGCGCTCAAGCTCGCTTCTGGTCTGCCTTCGTTGA  Raphanus sativus var. oleiformis
FD552449       <-- TCACATCCCCATGATCGCGTTCAAGCCCGCTTCTGGTCTGCCTTCGTTGA  Raphanus raphanistrum subsp. landra
EV572200       <-- ...................................GTCTGCCTTCGTTGA  Raphanus raphanistrum subsp. landra
EY909717       <-- ....................................gCTGCCTTCGTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961322       <-- ........................................CCTTCGTTGA  Raphanus raphanistrum subsp. maritimus
EY935861       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD577574       --> TCACATCCCTATGATCGCGCTCAAGCTCGCTTCTGGTCTGCCTTCGTTGA  Raphanus sativus cv Rat-Tail Radish #3870
FD965633       --> TCACATCCCTATGATCGCGCTCAAGCTCGCTTCTGGTCTGCCTTCGTTGA  Raphanus raphanistrum subsp. maritimus
EV526692       --> TCACATCCCTATGATTGCGCTCAAGCTCGCTTCTGGTCTGCCTTCGTTGA  Raphanus raphanistrum subsp. maritimus
EV539034       --> TCACATCCCCATGATCGCGCTCAAGCTCGCTTCTGGTCTGCCTTCGTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551965       --> TCACATCCCTATGATCGCGCTCAAGCTCGCTTCTGGTCTGCCTTCGTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715170       --> TCACATCCCCATGATCGCGCTCAAGCTCGCTTCTGGTCTGCCTTCGTTGA  Raphanus sativus var. oleiformis
EV567222       --> TCACATCCCCATTATCGCGCTCAAGCTCGCTTCTGGTCTGCCTTCGTTGA  Raphanus raphanistrum subsp. landra
EX902460       --> TCACATCCCTATGATCGCGCTCAAGCTCGCTTCTGGTCTGCCTTCGTTGA  Raphanus sativus cv Rat-Tail Radish #3870
FD556086       --> TCACATCCCCATGATCGCGTTCAAGCCCGCTTCTGGTCTGCCTTCGTTGA  Raphanus raphanistrum subsp. landra
EY913497       --> ....................................gCTGCCTTCGTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940035       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               351    -    401
UN23418        --> TGACAAGTGGTTTCCGGCTTTGAAAGCGGCCGCAATCACCAAATCCGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531105       <-- TGACAAGTGGTTTCCGGCTTTGAAAGCGGCCGCAATCACCAAATCCGAAG
EX906734       <-- TGACAAGTGGTTACCGGCTTTGAAAGCGGCCGCAATCACCAAATCCGAAG
EV546971       <-- TGACAAGTGGTTTCCGGCTTTGAAAGCGGCCGCAATCACCAAATCCGAAG
EW719842       <-- TGACAAGTGGTTTCCGGCTTTGAAAGCGGCCGCAATCACCAAATCCGAAG
FD552449       <-- TGACAAGTGGTTTCCGGCTTTGAAAGCGGCCGCAATCACCAAATCCGAAG
EV572200       <-- TGACAAGTGGTTTCCGGCTTCGAAAGCGGCCGCAATCACCAAATCCGAAG
EY909717       <-- TGACAAGTGGTTTCCGGCTTTGAAAGCGGCCGCAATCACCAAATCCGAAG
FD961322       <-- TGACAAGTGGTTTCCGGCTTTGAAAGCGGCCGCAATCACCAAATCCGAAG
EY935861       <-- ..................................................
FD577574       --> TGACAAGTGGTTACCGGCTTTGAAAGCGGCCGCAATCACCAAATCCGAAG
FD965633       --> TGACAAGTGGTTTCCGGCTTTGAAAGCGGCCGCAATCACCAAATCCGAAG
EV526692       --> TGACAAGTGGTTTCCGGCTTTGAAAGCGGCCGCAATCACCAAATCCGAAG
EV539034       --> TGACAAGTGGTTTCCGGCTTTGAAAGCGGCCGCAATCACCAAATCCGAAG
EV551965       --> TGACAAGTGGTTTCCGGCTTTGAAAGCGGCCGCAATCACCAAATCCGAAG
EW715170       --> TGACAAGTGGTTTCCGGCTTTGAAAGCGGCCGCAATCACCAAATCCGAAG
EV567222       --> TGACAAGTGGTTTCCGGCTTCGAAAGCGGCCGCAATCACCAAATCCGAAG
EX902460       --> TGACAAGTGGTTACCGGCTTTGAAAGCGGCCGCAATCACCAAATCCGAAG
FD556086       --> TGACAAGTGGTTTCCGGCTTTGAAAGCGGCCGCAATCACCAAATCCGAAG
EY913497       --> TGACAAGTGGTTTCCGGCTTTGAAAGCGGCCGCAATCACCAAATCCGAAG
EY940035       --> ..................................................

               401    -    451
UN23418        --> AGGCAAAAGAAAAAGGCATGAAAGAAGTGGAAGAAGGGTTATTGCAACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531105       <-- AGGCAAAAGAAAAAGGCATGAAAGAAGTGGAAGAAGGGTTATTGCAACTC  Raphanus raphanistrum subsp. maritimus
EX906734       <-- AGGCAAAAGAAAAAGGCATGAAAGAAGTGGAAGAAGGGTTATTGCAACTC  Raphanus sativus cv Rat-Tail Radish #3870
EV546971       <-- AGGCAAAAGAAAAAAGCATGAAAGAAGTGGAAGAAGGGTTATTGCAACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719842       <-- AGGCAAAAGGAAAAGGCATGAAAGAAGTGGAAGAAGGGTTATTGCAACTC  Raphanus sativus var. oleiformis
FD552449       <-- AGGCAAAAGAAAAAGGCATGAAAGAAGTGGAAGAAGGGTTATTGCAACTC  Raphanus raphanistrum subsp. landra
EV572200       <-- AGGCAAAAGAAAAAGGCATGAAAGAAGTGGAAGAAGGGTTATTGCAACTC  Raphanus raphanistrum subsp. landra
EY909717       <-- AGGCAAAAGAAAAAAGCATGAAAGAAGTGGAAGAAGGGTTATTGCAACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961322       <-- AGGCAAAAGAAAAAGGCATGAAAGAAGTGGAAGAAGGGTTATTGCAACTC  Raphanus raphanistrum subsp. maritimus
EY935861       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD577574       --> AGGCAAAAGAAAAAGGCATGAAAGAAGTGGAAGAAGGGTTATTGCAACTC  Raphanus sativus cv Rat-Tail Radish #3870
FD965633       --> AGGCAAAAGAAAAAGGCATGAAAGAAGTGGAAGAAGGGTTATTGCAACTC  Raphanus raphanistrum subsp. maritimus
EV526692       --> AGGCAAAAGAAAAAGGCATGAAAGAAGTGGAAGAAGGGTTATTGCAACTC  Raphanus raphanistrum subsp. maritimus
EV539034       --> AGGCAAAAGAAAAAAGCATGAAAGAAGTGGAAGAAGGGTTATTGCAACTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551965       --> AGGCAAAAGAAAAAAGCATGAAAGAAGTGGAAGAAGGGTTATTGCAACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715170       --> AGGCAAAAGGAAAAGGCATGAAAGAAGTGGAAGAAGGGTTATTGCAACTC  Raphanus sativus var. oleiformis
EV567222       --> AGGCAAAAGAAAAAGGCATGAAAGAAGTGGAAGAAGGGTTATTGCAACTC  Raphanus raphanistrum subsp. landra
EX902460       --> AGGCAAAAGAAAAAGGCATGAAAGAAGTGGAAGAAGGGTTATTGCAACTC  Raphanus sativus cv Rat-Tail Radish #3870
FD556086       --> AGGCAAAAGAAAAAGGCATGAAAGAAGTGGAAGAAGGGTTATTGCAACTC  Raphanus raphanistrum subsp. landra
EY913497       --> AGGCAAAAGAAAAAAGCATGAAAGAAGTGGAAGAAGGGTTATTGCAACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940035       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               451    -    501
UN23418        --> GAGGAAGCCTTTGTTTCTATAAGCAAAGGGAAACCGTTTTTCGGAGGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531105       <-- GAGGAAGCCTTCGTTTCTATAAGCAAAGGGAAACCGTTTTTCGGAGGTGA
EX906734       <-- GAGGAAGCCTTTGTTTCTATAAGCAAAGGGAAACCGTTTTTCGGAGGTGA
EV546971       <-- GAGGAAGCCTTTGTTTCTATAAGCAAAGGGAATCCGTTTTTCGGAGGTGA
EW719842       <-- GAGGAAGCCTTTGTTTCTATAAGCAAAGGGAAACCGTTTTTCGGAGGTGA
FD552449       <-- GAGGAAGCCTTTGTTTCTATAAGCAAAGGGAAACCGTTTTTCGGAGGTGA
EV572200       <-- GAGGAAGCCTTTGTTTCTATAAGCAAAGGGAAACCGTTTTTCGGAGGTGA
EY909717       <-- GAGGAAGCCTTTGTTTCTATAAGCATAGGGAATCCGTTTTTCGGAGGTGA
FD961322       <-- GAGGAAGCCTTCGTTTCTATAAGCAAAGGGAAACCGTTTTTCGGAGGTGA
EY935861       <-- ..................................................
FD577574       --> GAGGAAGCCTTTGTTTCTATAAGCAAAGGGAAACCGTTTTTCGGAGGTGA
FD965633       --> GAGGAAGCCTTCGTTTCTATAAGCAAAGGGAAACCGTTTTTCGGAGGTGA
EV526692       --> GAGGAAGCCTTCGTTTCTATAAGCAAAGGGAAACCGTTTTTCGGAGGTGA
EV539034       --> GAGGAAGCCTTTGTTTCTATAAGCAAAGGGAAACCGTTTTTTGGAGGTGA
EV551965       --> GAGGAAGCCTTTGTTTCTATAAGCAAAGGGAATCCGTTTTTCGGAGGTGA
EW715170       --> GAGGAAGCCTTTGTTTCTATAAGCAAAGGGAAACCGTTTTTCGGAGGTGA
EV567222       --> GAGGAAGCCTTTGTTTCTATAAGCAAAGGGAAACCGTTTTTCGGAGGTGA
EX902460       --> GAGGAAGCCTTTGTTTCTATAAGCAAAGGGAAACCGTTTTTCGGAGGTGA
FD556086       --> GAGGAAGCCTTTGTTTCTATAAGCAAAGGGAAACCGTTTTTCGGAGGTGA
EY913497       --> GAGGAAGCCTTTGTTTCTATAAGCATAGGGAATCCGTTTTTCGGAGGTGA
EY940035       --> ....gAGCCTTTGTTTCTATAAGCAAAGGGAAACCGTTTTTCGGAGGTGA

               501    -    551
UN23418        --> AGCGATCGGGTTTATGGACATTTGCCTCGGAAGCTTTGTGGGTATCTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531105       <-- AGCGATCGGGTTTATGGACATTTGCCTCGGAAGCTTTGTGGGCATCTTGA
EX906734       <-- AGCGATCGGGTTTATGGACATTTGCCTCGGAAGCTTTGTGGGTATCTTGA
EV546971       <-- AGCGATCGGGTTTATGGACATTTGCCTCGGAAGCTTTGTGGGTATCTTGA
EW719842       <-- AGCGATCGGGTTTATGGACATTTGCCTCGGAAGCTTTGTGGGTATCTTGA
FD552449       <-- AGCGATCGGGTTTATGGACATTTGCCTCGGAAGCTTTGTGGGTATCTTGA
EV572200       <-- AGCGATCGGGTTTATGGACATTTGCCTCGGAAGCTTTGTGGGTATCTTGA
EY909717       <-- AGCGATCGGGTTTATGGACATTTGCCTCGGAAGCTTTGTGGGTATCTTGA
FD961322       <-- AGCGATCGGGTTTATGGACATTTGCCTCGGAAGCTTTGTGGGCATCTTGA
EY935861       <-- ..................................................
FD577574       --> AGCGATCGGGTTTATGGACATTTGCCTCGGAAGCTTTGTGGGTATCTTGA
FD965633       --> AGCGATCGGGTTTATGGACATTTGCCTCGGAAGCTTTGTGGGCATCTTGA
EV526692       --> AGCGATCGGGTTTATGGACATTTGCCTCGGAAGCTTTGTGGGCATCTTGA
EV539034       --> AGTGATCGGGTTTATGGACATTTGCCTCGGAAGCTTTGTGGGTATCTTGA
EV551965       --> AGCGATCGGGTTTATGGACATTTGCCTCGGAAGCTTTGTGGGTATCTTGA
EW715170       --> AGCGATCGGGTTTATGGACATTTGCCTCGGAAGCTTTGTGGGTATCTTGA
EV567222       --> AGCGATCGGGTTTATGGACATTTGCCTCGGAAGCTTTGTGGGTATCTTGA
EX902460       --> AGCGATCGGGTTTATGGACATTTGCCTCGGAAGCTTTGTGGGTATCTTGA
FD556086       --> AGCGATCGGGTTTATGGACATTTGCCTCGGAAGCTTTGTGGGTATCTTGA
EY913497       --> AGCGATCGGGTTTATGGACATTTGCCTCGGAAGCTTTGTGGGTATCTTGA
EY940035       --> AGCGATCGGGTTTATGGACATTTGCCTCGGAAGCTTTGTGGGTATCTTGA

               551    -    601
UN23418        --> AGGCTAGAGAGAAGCTTAAAGGAGAAAAGCTTTTAGACGAAACAAAAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531105       <-- AGGCTAGAGAGAAGCTTAAGGGAGAAAAGCTTTTAGACGAAACAAAAGTT
EX906734       <-- AGGCTAGAGAGAAGCTTAAAGGAGAAAAGCTTTTAGATGAAACAAAAGTT
EV546971       <-- AGGCTACAGAGAAGCTTAAAGGAGAAAAGCTTTTAGACGAAACAAAAGTT
EW719842       <-- AGGCTAGAGAGAAGCTTAAAGGAGAAAAGCTTTTAGACGAAACAAAAGTT
FD552449       <-- AGGCTAGAGAGAAGCTTAAAGGAGAAAAGCTTTTAGACGAAACAAAAGTT
EV572200       <-- AGGCTAGAGAGAAGCTTAAAGGAGAAAAGCTTTTAGACGAAACAAAAGTT
EY909717       <-- AGGCTACAGAGAAGCTTAAAGGAGAAAAGCTTTTAGACGAAACAAAAGTT
FD961322       <-- AGGCTAGAGAGAAGCTTAAGGGAGAAAAGCTTTTAGACGAAACAAAAGTT
EY935861       <-- .........................................ACAAAAGTT
FD577574       --> AGGCTAGAGAGAAGCTTAAAGGAGAAAAGCTTTTAGATGAAACAAAAGTT
FD965633       --> AGGCTAGAGAGAAGCTTAAGGGAGAAAAGCTTTTAGACGAAACAAAAGTT
EV526692       --> AGGCTAGAGAGAAGCTTAAGGGAGAAAAGCTTTTAGACGAAACAAAAGTT
EV539034       --> AGGCTAGAGAGAAGCTTAAAGGAGAAAAGCTTTTAGACGAAACAAAATTT
EV551965       --> AGGCTACAGAGAAGCTTAAAGGAGAAAAGCTTTTAGACGAAACAAAAGTT
EW715170       --> AGGCTAGAGAGAAGCTTAAAGGAGAAAAGCTTTTAGACGAAACAAAAGTT
EV567222       --> AGGCTAGAGAGAAGCTTAAAGGAGAAAAGCTTTTAGACGAAACAAAAGTT
EX902460       --> AGGCTAGAGAGAAGCTTAAAGGAGAAAAGCTTTTAGATGAAACAAAAGTT
FD556086       --> AGGCTAGAGAGAAGCTTAAAGGAGAAAAGCTTTTAGACGAAACAAAAGTT
EY913497       --> AGGCTACAGAGAAGCTTAAAGGAGAAAAGCTTTTAGACGAAACAAAAGTT
EY940035       --> AGGCTAGAGAGAAGCTTAAAGGAGAAAAGCTTTTAGACGAAACAAAAGTT

               601    -    651
UN23418        --> CCTTCTCTTTGTAAATGGGCGGACCAGTTCTTGTCTGATGATACTGTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531105       <-- CCTTCTCTTTGTAAATGGGCGGACAGGTTCTTGTCTGATGATACTGTGAA  Raphanus raphanistrum subsp. maritimus
EX906734       <-- CCTTCTCTTTGTAAATGGGCGGACGGGTTCTTGTCTGATGATACTGTGAA  Raphanus sativus cv Rat-Tail Radish #3870
EV546971       <-- CCTTCTCTTTGTAAATGGGCGGACCAGTTCTTGTCTGATAATACTGTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719842       <-- CCTTCACTTTGTAAATGGGCGGACCAGTTCTTGTCTGATGATACTGTGAA  Raphanus sativus var. oleiformis
FD552449       <-- CCTTCACTTTGTAAATGGGCGGACCAGTTCTTGTCTGATGATACTGTGAA  Raphanus raphanistrum subsp. landra
EV572200       <-- CCTTCACTTTGTAAATGGGCGGACCAGTTCTTGTCTGATGATACTGTGAA  Raphanus raphanistrum subsp. landra
EY909717       <-- CCTTCTCTTTGTAAATGGGCGGACCAGTTCTTGTCTGATGATACTGTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961322       <-- CCTTCTCTTTGTAAATGGGCGGACAGGTTCTTGTCTGATGATACTGTGAA  Raphanus raphanistrum subsp. maritimus
EY935861       <-- CCTTCACTTTGTAAATGGGGGGACCAGTTTTTGTTTGATGATACTGTGAA  Raphanus sativus cv Early Scarlet Globe
FD577574       --> CCTTCTCTTTGTAAATGG-CGGACGGGTTCTTGCCTGATGATACTGTGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD965633       --> CCTTCTCTTTGTAAATGGGCGGACAGGTTCTTGTCTGATGATACTGTGAA  Raphanus raphanistrum subsp. maritimus
EV526692       --> CCTTCTCTTTGTAAATGGGCGGACAGGTTCTTGTCTGATGATACTGTGAA  Raphanus raphanistrum subsp. maritimus
EV539034       --> CCTTCTCTTTGTAAATGGGCGGACCAGTTCTTGTCTGATGATACTGTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551965       --> CCTTCTCTTTGTAAATGGGCGGACCAGTTCTTGTCTGATAATACTGTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715170       --> CCTTCACTTTGTAAATGGGCGGACCAGTTCTTGTCTGATGATACTGTGAA  Raphanus sativus var. oleiformis
EV567222       --> CCTTCACTTTGTAAATGGGCGGACCAGTTCTTGTCTGATGATACTGTGAA  Raphanus raphanistrum subsp. landra
EX902460       --> CCTTCTCTTTGTAAATGGGCGGACGGGTTCTTGTCTGATGATACTGTGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD556086       --> CCTTCACTTTGTAA....................................  Raphanus raphanistrum subsp. landra
EY913497       --> CCTTCTCTTTGTAAATGGGCGGACCAGTTCTTGTCTGATGATACTGTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940035       --> CCTTCACTTTGTAAATGGGCGGACCAGTTCTTGTCTGATGATACTGTGAA  Raphanus sativus cv Early Scarlet Globe

               651    -    701
UN23418        --> GAATGTGGTACCGGAGATCGATAAAGTGGCTGAGTTTCTAGGAGGGCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531105       <-- GAATGTGGTACCGGAGATCGATAAAGTGGCTGAGTTTCTAGGAGGGCTTG  Raphanus raphanistrum subsp. maritimus
EX906734       <-- GAATGTGGTACCGGAGATCGATAAAGTGGCTGAGTTTCTAGGAGGGCTTG  Raphanus sativus cv Rat-Tail Radish #3870
EV546971       <-- GAATGTGGTACCAGAGATCGATAAAGTGGCTGAGTTTCTAGGAGAGCTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719842       <-- GAATGTGGTGCCGGAGATCGATAAAATGGCTGAGTTTCTAGGAGGGCTTG  Raphanus sativus var. oleiformis
FD552449       <-- GAATGTGGTACCGGAGATCGATAAAATGGCTGAGTTTCTAGGAGGGCTTG  Raphanus raphanistrum subsp. landra
EV572200       <-- GAATGTGGTACCGGAGATCGATAAAATGGCTGAGTTTCTAGGAGGGCTTG  Raphanus raphanistrum subsp. landra
EY909717       <-- GAATGTGGTACCAGAGATCGATAAAGTGGCTGAGTTTCTAGGAGAGCTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961322       <-- GAATGTGGTACCGGAGATCGATAAAGTGGCTGAGTTTCTAGGAGGGCTTG  Raphanus raphanistrum subsp. maritimus
EY935861       <-- GAATGTGGTACCGGAGATCGATAAAATGTTTGAGTTTTTAGGGGGGCTTG  Raphanus sativus cv Early Scarlet Globe
FD577574       --> GAATGTGGTACCGGAGATCGATAAAGTGGCTGAGTTTCTAG-AGGGCTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD965633       --> GAATGTGGTACCGGAGATCGATAAAGTGGCTGAGTTTCTAG-AGGGCTTG  Raphanus raphanistrum subsp. maritimus
EV526692       --> GAATGTGGTACCGGAGATCGATAAAGTGGCTGAGTTTCTAGGAGGGCTTG  Raphanus raphanistrum subsp. maritimus
EV539034       --> GAATGTGGTACTGGAGATCGATAAAGTGGCTGAGCTTCTAGGAGAGCTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551965       --> GAATGTGGTACCAGAGATCGATAAAGTGGCTGAGTTTCTAGGAGAGCTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715170       --> GAATGTGGTGCCGGAGATCGATAAAATGGCTGAGTTTCTAGGAGGGCTTG  Raphanus sativus var. oleiformis
EV567222       --> GAATGTGGTACCGGAGATCGATAAAATGGCTGAGTTTCTAGGAGGGCTTG  Raphanus raphanistrum subsp. landra
EX902460       --> GA-TGTGGTACCGGAGATCGATAAAGTGGCTGAGTTTCTAG-AGGGCTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD556086       --> ..................................................  Raphanus raphanistrum subsp. landra
EY913497       --> GAATGTGGTACCAGAGATCGATAAAGTGGCTGAGTTTCTAGGAGAGCTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940035       --> GAATGTGGTACCGGAGATCGATAAAATGTCTGAGTTTCTAGGAGGGCTTG  Raphanus sativus cv Early Scarlet Globe

               701    -    751
UN23418        --> AGGTTAGAGCTCAATCAGCGGTTTCAAGAACTTGAGATCATCGTTGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531105       <-- AGGTTAGAGCTCAATCAGCGGTTTCAAGAACTTGAGATCATCGTTGAAAA
EX906734       <-- AGGTTAGAGCTCAATCAGCGGTTTCAAGAACTTGAGGTCATCGTTGAAAA
EV546971       <-- AGGTTAGAGCTCAATCAGCGGTTTCAAGAACTTGAGATCATCGTTGAAAA
EW719842       <-- TGGTTAGAGCTCAATCAGCGGTTTCAGGAACTTGAGATCATCGTTGAAAA
FD552449       <-- AGTTTAGAGCTCAATCAGCGGTTTCAAGAACTTGAGATCATCGTTGAAAA
EV572200       <-- AGGTTAGAGCTCAATCAGCGGTTTCAAGAACTTGAGATCATCGTTGAAAA
EY909717       <-- AGGTTAGAGCTCAATCAGCGGTTTCAAGAACTTGAGATCATCGTTGAAAA
FD961322       <-- AGGTTAGAGCTCAATCAGCGGTTTCAAGAACTTGAGATCATCGTTGAAAA
EY935861       <-- AGGTTAGAGCTCAATCAGCGGTTTCAAGAACTTGAGATCATCGTTGAAAA
FD577574       --> AG-TTAGAGCTCAATCAGCGGTT-C-AGAACTTGAGATCATC........
FD965633       --> AG-TTAGAGCTCAATCAGCGGTTTCA-GAACTTGAGATCATCGTTGAAA-
EV526692       --> AGGTTAGAGCTCAATCAGCGGTTTCAAGAACTTGAGATCATCGTTGAAAA
EV539034       --> AGGTTAGAGCTCAATCAGCGGTTTCAAGAACTTGGGATCATCGTTGAAAA
EV551965       --> AGGTTAGAGCTCAATCAGCGGTTTCAAGAACTTGAGATCATCGTTGAAAA
EW715170       --> TGGTTAGAGCTCAATCAGCGGTTTCA-GAACTTGAGATCATCGTTGAAAA
EV567222       --> AGGTTAGAGCTCAATCAGCGGTTTCAAGAACTTGAGATCATCGTTGAAAA
EX902460       --> AGGT-AGAGCTCAATCAGCGGTTTCAAGA-CTTGAGGTCATCGTTGAAAg
FD556086       --> ..................................................
EY913497       --> AGGTTAGAGCTCAATCAGCGGTTTCAAGAACTTGAGATCATCGTTGAAAA
EY940035       --> AGGTTAGAGCTCAATCAGCGGTTTCAAGAACTTGAGATCATCGTTGAAAA

               751    -    801
UN23418        --> GCAAATGGACGT--GTGTAATGTAAGTGCGAAAATAAGTGAAAGGT-CGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531105       <-- GCAAATGGACGT--GTGTAATGTAAGTGCGAAAATAAGTGAAAGGT-CGA
EX906734       <-- GCAA-TGGACGTCTGTGTAATGTAAGTGCGAAAATAAGTGGAAGGTTAGA
EV546971       <-- GCAAATGGACGT--GTGTAATGTAAGTGCGAAAATAAGTGAAAGGT-CGA
EW719842       <-- GCAAATGGACGT--GTGTAATGTAAGTGCGAAAATAAGTGAAAGGT-CGA
FD552449       <-- GCAAATGGACGT--GTGTAATGTAAGTGCGAAAATAAGTGAAAGGT-CGA
EV572200       <-- GCAAATGGACGT--GTGTAATGTAAGTGCGAAAATAAGTGAAAGGT-CGA
EY909717       <-- GCAAATGGACGT--GTGTAATGTAAGTGCGAAAATAAGTGAAAGGT-CGA
FD961322       <-- GCAAATGGACGT--GTGTAATGTAAGTGCGAAAATAAGTGAAAGGT-CGA
EY935861       <-- GCAAATGGACGT--GTGTAATGTAAGTGCGAAAATAAGTGAAAGGT-CGA
FD577574       --> ..................................................
FD965633       --> GC-AATGGACGT--GTGTA-TGT-AGTGCGAAA-TAAGTGAAAGG--CG-
EV526692       --> GCAAATGGACGT--GTGTAATGTAAGTGCGAAAATAAGTGAAAGGT-CGA
EV539034       --> GCAAATGGACGT--GTGTAATGTAAGTGCGAAAATAAGTGAAAGGT-CGA
EV551965       --> GCAAATGGACGT--GTGTAATGTAAGTGCGAAAATAAGTGAAAGGT-CGA
EW715170       --> GCAAATGGACGT--GTGTAATGTAAGTGCGAAA-TAAGTGAAAGGT-CGA
EV567222       --> GCA...............................................
EX902460       --> catggacgtctgtgtatgtagtgcg.........................
FD556086       --> ..................................................
EY913497       --> GCAAATGGACGT--GTGTAATGTAAGTGCGAAAATAAGTGAAAGGT-CGA
EY940035       --> GCAAATGGACGT--GTGTAATGTAAGTGCGAAAATAAGTGAAAGGT-CGA

               801    -    851
UN23418        --> AGTGTTGTATTGAATGTATGCTAGTAATTTATACAATGCTGTGTATGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531105       <-- AGTGTTGTATTGAATGTATGCTAGTAATTTATACAATGCTGTGTATGGTT
EX906734       <-- AGTGTTGTATTGAATGTATGCTAGTGTTTTATACAGTGCTGTGTATGGTT
EV546971       <-- AGTGTTGTATTGAATGTATGCTAGTAATTTATACAATGCTGTGTATGGTT
EW719842       <-- AGTGTTGTATTGAATGTATGCTAGTAATTTATACAATGCTGTGTATGGTT
FD552449       <-- AGTGTTGTATTGAATGTATGCTAGTAATTTATACAATGCTGTGTATGGTT
EV572200       <-- AGTGTTGTATTGAATGTATGCTAGTAATTTATACAATGCTGTGTATGGTT
EY909717       <-- AGTGTTGTATTGAATGTATGCTAGTAATTTATACAATGCTGTGTATGGTT
FD961322       <-- AGTGTTGTATTGAATGTATGCTAGTAATTTATACAATGCTGTGTATGGTT
EY935861       <-- AGTGTTGTATTGAATGTATGCTAGTAATTTATACAATGCTGTGTATGGTT
FD577574       --> ..................................................
FD965633       --> AGTGTTGT-TTG-ATGTATGCTAG..........................
EV526692       --> AGTGTTGTATTGAATGTATGCTAGTAATTTATACAATGCTGTGTATGGTT
EV539034       --> AGTGTTGTATTGAATGTATGCTAGTAATTTATACA-TGCTGTGTATGGTT
EV551965       --> AGTGTTGTATTGAATGTATGCTAGTAATTTATACAATGCTGTGTATGGTT
EW715170       --> AGTGTTGTATTGAATGTATGCTAGTAATTTATACA-TGCTGTGTATGGTT
EV567222       --> ..................................................
EX902460       --> ..................................................
FD556086       --> ..................................................
EY913497       --> AGTGTTGTATTGAATGTATGCTAGTAATTTATACAATGCTGTGTATGGTT
EY940035       --> AGTGTTGTATTGAATGTATGCTAGTAATTTATACAATGCTGTGTATGGTT

               851    -    901
UN23418        --> TATGGATAATGCTTTCAA-------TAATTGAAAATGGCAGATTATTAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531105       <-- TATGGATAATGCTTTCAA-------TAATTGAAAATGcc...........
EX906734       <-- TATGGATAATGCTTTCAA-------TAATTGAAAATGGCAGATTActcgt
EV546971       <-- TATGGATAATGCTTTCAA-------TAATTGAAAATGGCAGATTAgtcgt
EW719842       <-- TATGGATAATGCTTTCAAATTTCAATAATTGAAAATGGCAGATTATTAGT
FD552449       <-- TATGGATAATG.......................................
EV572200       <-- TATGGATAATGCTTTCAA-------TAATTGAAAATGGCAGATTATTAGT
EY909717       <-- TATGGATAATGCTTTCAA-------TAATTGAAAATGGCAGATTAgtcgt
FD961322       <-- TATGGATAATGCTTTCAA-------TAATTGAAAATGGCAGATTAgtcgt
EY935861       <-- TATGGATAATGCTTTCAA-------TAATTGAAAATGGCAGATTATTAGT
FD577574       --> ..................................................
FD965633       --> ..................................................
EV526692       --> TATGGATAATGCTTTCAA-------TAATTGAAAATGc............
EV539034       --> TATGGATAATGCTTTCAA-------TAATTGAAAATG.............
EV551965       --> TATGGATAATGCTTTCAA-------TAATTGAAA................
EW715170       --> TATGGATAATGCTTTCAAatttcataattgaaatggc.............
EV567222       --> ..................................................
EX902460       --> ..................................................
FD556086       --> ..................................................
EY913497       --> TATGGATAATGCTTTCAA-------TAATTGAAAATGGCAGATTAgtcgt
EY940035       --> TATGGATAATGCTTTCAA-------TAATTGAAAATGGCAGATTATTAGT

               901    -    951
UN23418        --> CGTTCCAACCCG
                   ~~~~~~~~~~~~
EV531105       <-- ............
EX906734       <-- tccaacc.....
EV546971       <-- tcc.........
EW719842       <-- ............
FD552449       <-- ............
EV572200       <-- CGTTC.......
EY909717       <-- tcc.........
FD961322       <-- tcc.........
EY935861       <-- CGTTCCAACCCG
FD577574       --> ............
FD965633       --> ............
EV526692       --> ............
EV539034       --> ............
EV551965       --> ............
EW715170       --> ............
EV567222       --> ............
EX902460       --> ............
FD556086       --> ............
EY913497       --> tcc.........
EY940035       --> CGTTCCAACCCG