1      -     51
UN23425        --> GGGTAACAGAATCATTTGAAATTTATAACTCCCCACAGAGCAAAGAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529518       <-- ..................................................
FD547946       <-- ..................................................
EW727691       <-- ..................................................
EX891757       <-- ..................................................
EY936294       <-- ..................................................
FD959025       <-- ..................................................
EV542568       <-- ..................................................
FD934472       <-- ..................................................
EY920917       <-- ..................................................
FD537503       <-- ..................................................
EW719811       <-- ..................................................
FD539651       <-- ..................................................
EY919217       <-- ..................................................
FD962474       --> GGGTAACAGAATCATTTGAAATTTATAACTCCCCACAGAGCAAAGAAGAA
FD544019       --> .................................................g
FD543932       --> ..................................................
EY949505       --> ..................................................
FD955135       --> ..................................................
EW733742       --> ..................................................
FD536495       --> ..................................................
EW731480       --> ..................................................
EY925440       --> ..................................................
EY929818       --> ..................................................
EY938712       --> ..................................................
FD937969       --> ..................................................
EY940548       --> ..................................................
EW715128       --> ..................................................
EX887655       --> ..................................................
FD964288       --> ..................................................
EV524544       --> ..................................................
FD552118       --> ..................................................
EV566316       --> ..................................................
EX904034       --> ..................................................
FD955124       --> ..................................................
FY428532       --> ..................................................
EX765327       --> ..................................................
EV538592       --> ..................................................
EW722932       --> ..................................................
FD946634       --> ..................................................

               51     -    101
UN23425        --> GAAACCTCTCTCACACTATCAGAATCTGATCC----CACCTTTCTTTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529518       <-- ...ggCTCTCTCACACTATCAGAATCTGATCCTCCCCACCTTTCTTTGAT
FD547946       <-- ..................................................
EW727691       <-- ................................................ct
EX891757       <-- ..................................................
EY936294       <-- ..................................................
FD959025       <-- ..................................................
EV542568       <-- ..................................................
FD934472       <-- ..................................................
EY920917       <-- ..................................................
FD537503       <-- ..................................................
EW719811       <-- ..................................................
FD539651       <-- ..................................................
EY919217       <-- ..................................................
FD962474       --> GAAACCTCTCTCACACTATCAGAATCTGATCC----CACCTTTCTCTGAT
FD544019       --> GAAACCTCTCTCACACTATCAGAATCTGATCC-TCCCACCTTTCTTTGAT
FD543932       --> .ggACCTCTCTCACACTATCAGAATCTGATCC----CACCTTTCACTGAT
EY949505       --> ...ggCTCTCTCACACTATCAGAATCTGATCC----CACCTTTCTCTGAT
FD955135       --> ...ggCTCTCTCACACTATCAGAATCTGATCC----CACCTTTCTCTGAT
EW733742       --> ..........ggACACTATCAGAATCTGATCC----CACCTTTCTCTGAT
FD536495       --> ..........ggACACTATCAGAATCTGATCC-TCCCACCTTTCTTTGAT
EW731480       --> ............ggatcaaaAGAATCTGATCC----CACCTTTCTTTGAT
EY925440       --> .......ggacactatcagaAGAATCTGATCC----CACCTTTCTTTGAT
EY929818       --> .........ggactatcaaaAGAATCTGATCC----CACCTTTCTTTGAT
EY938712       --> .........ggactatcagaAGAATCTGATCC----CACCTTTCTTTGAT
FD937969       --> .......ggacactatcagaAGAATCTGATCC----CACCTTTCTTTGAT
EY940548       --> ....................gGAATCTGATCC----CACCTTTCTTTGAT
EW715128       --> .......................ATCTGATCC----CACCTTTCTTTGAT
EX887655       --> .......................ATCTGATCC----CACCTTTCTTTGAT
FD964288       --> .................ggaatctgatccTCC----CACCTTTCTTTGAT
EV524544       --> ..................................................
FD552118       --> ..................................................
EV566316       --> ..................................................
EX904034       --> ..................................................
FD955124       --> ..................................................
FY428532       --> ..................................................
EX765327       --> ..................................................
EV538592       --> ..................................................
EW722932       --> ..................................................
FD946634       --> ..................................................

               101    -    151
UN23425        --> TCTCAGTCCAAAAGTTAAGTCAAAGAGTTGAAAA-TGGAAGGGACTGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529518       <-- TCTCAGTCCAAAAGTTAAGTCAAAGAGTTGAAAA-TGGAAGGGACTGTGT  Raphanus raphanistrum subsp. maritimus
FD547946       <-- ..ggAGTCCAAAAGTTAAGTCAAAGAGTTGAAAA-TGGAAGGGACTGTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727691       <-- ttgattctgaggccaaAAGTCAAAGAGTTGAAAA-TGGAAGGGACTGTGT  Raphanus sativus cv Early Scarlet Globe
EX891757       <-- .....................AAAGAGTGAAAAA-TGGAAGGGACTGTGT  Raphanus sativus var. oleiformis
EY936294       <-- ................................AA-TGGAAGGGACTGTGT  Raphanus sativus cv Early Scarlet Globe
FD959025       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV542568       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD934472       <-- ..................................................  Raphanus sativus var. oleiformis
EY920917       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD537503       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW719811       <-- ..................................................  Raphanus sativus var. oleiformis
FD539651       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919217       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD962474       --> TCTCAGTCCAAAAGTTAAGTCAAAGAGTTGAAAA-TGGAAGGGACTGTGT  Raphanus raphanistrum subsp. maritimus
FD544019       --> TCTCAGTCCAAAAGTTAAGTCAAAGAGTTGAAAA-TGGAAGGGACTGTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543932       --> TCTCAGTCCAAAAGTTAAGTCAAAGAGTTGAAAA-TGGAAGGGACTGTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949505       --> TCTCAGTCCAAAAGTTAAGTCAAAGAGTTGAAAA-TGGAAGGGACTGTGT  Raphanus sativus cv Rat-Tail Radish #3870
FD955135       --> TCTCAGTCCAAAAGTTAAGTCAAAGAGTTGAAAA-TGGAAGGGACTGTGT  Raphanus sativus cv Rat-Tail Radish #3870
EW733742       --> TCTCAGTCCAAAAGTTAAGTCAAAGAGTTGAAAA-TGGAAGGGACTGTGT  Raphanus sativus cv Rat-Tail Radish #3870
FD536495       --> TCTCAGTCCAAAAGTTAAGTCAAAGAGTTGAAAA-TGGAAGGGACTGTGT  Raphanus raphanistrum subsp. maritimus
EW731480       --> TCTGAGGCCAAAAGTTAAGTCAAAGAGTTGAAAAATGGAAGGGACTGTGT  Raphanus sativus cv Rat-Tail Radish #3870
EY925440       --> TCTGAGGCCAAAAGTTAAGTCAAAGAGTTGAAAA-TGGAAGGGACTGTGT  Raphanus raphanistrum subsp. landra
EY929818       --> TCTGAGGCCAAAAGTTAAGTCAAAGAGTTGAAAAATGGAAGGGACTGTGT  Raphanus sativus var. oleiformis
EY938712       --> TCTGAGGCCAAAAGT-----CAAAGAGTTGAAAA-TGGAAGGGACTGTGT  Raphanus sativus cv Early Scarlet Globe
FD937969       --> TCTGAGGCCAAAAGT-----CAAAGAGTTGAAAA-TGGAAGGGACTGTGT  Raphanus sativus var. oleiformis
EY940548       --> TCTGAGGCCAAAAGT-----CGAAGAGTTGAAAA-TGGAAGGGACTGTGT  Raphanus sativus cv Early Scarlet Globe
EW715128       --> TCTGAGGCCAAAAGTTAAGTCAAAGAGTTGAAAAATGGAAGGGACTGCGT  Raphanus sativus var. oleiformis
EX887655       --> TCTGAGGCCAAAAGTTAAGTCAAAGAGTTGAAAAATGGAAGGGACTGTGT  Raphanus sativus var. oleiformis
FD964288       --> TCTCAGTCCAAAAGTTAAGTCAAAGAGTTGAAAA-TGGAAGGGACTGTGT  Raphanus raphanistrum subsp. maritimus
EV524544       --> ...CAGTCCAAAAGTTAAGTCAAAGAGTTGAAAA-TGGAAGGGACTGTGT  Raphanus raphanistrum subsp. maritimus
FD552118       --> ..ggAGTCCAAAAGTTAAGTCAAAGAGTTGAAAA-TGGAAGGGACTGTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566316       --> .gggaggCCAAAAGTTAAGTCAAAGAGTTGAAAA-TGGAAGGGACTGTGT  Raphanus raphanistrum subsp. landra
EX904034       --> ....aggCCAAAAGTTAAGTCAAAGAGTTGAAAAATGGAAGGGACTGTGT  Raphanus sativus cv Rat-Tail Radish #3870
FD955124       --> .........AAAAGTTAAGTCAAAGAGTTGAAAA-TGGAAGGGACTGTGT  Raphanus sativus cv Rat-Tail Radish #3870
FY428532       --> ...........AAGTTAAGTCAAAGAGTTGAAAA-TGGAAGGGACTGTGT  Raphanus sativus cv GSK3-1
EX765327       --> .................................................T  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538592       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW722932       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD946634       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               151    -    201
UN23425        --> TCACGCCGTGTTTGGAAGGAATGAAGAATGTCAAGTCTGAACAAGGGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529518       <-- TCACGCCGTGTTTGGAAGGAATGAAGAACGTCAAGTCTGAACAAGGGGAG  Raphanus raphanistrum subsp. maritimus
FD547946       <-- TCACGCCGTGTTTGGAAGGAATGAAGAATGTCAAGTCTGAACAAGGGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727691       <-- TCACCCCGTGTTTGGAAGGAATGAAGAATGTCAAGTCTGAACAAGGGGAG  Raphanus sativus cv Early Scarlet Globe
EX891757       <-- TCACGCCGTGTTTGGAAGGAATGAAGAATGTCAAGTCTGAACAAGGGGAG  Raphanus sativus var. oleiformis
EY936294       <-- TCACCCCGTGTTTGGAAGGAATGAAGAATGTCAAGTCTGAACAAGGGGAG  Raphanus sativus cv Early Scarlet Globe
FD959025       <-- ...................AATGGAGAATGTCAAGTCTGAACAAGGGGAG  Raphanus raphanistrum subsp. maritimus
EV542568       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD934472       <-- ..................................................  Raphanus sativus var. oleiformis
EY920917       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD537503       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW719811       <-- ..................................................  Raphanus sativus var. oleiformis
FD539651       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919217       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD962474       --> TCACCCCGTGTTTGGAAGGAATGGAGAATGTCAAGTCTGAACAAGGGGAG  Raphanus raphanistrum subsp. maritimus
FD544019       --> TCACGCCGTGTTTGGAAGGAATGAAGAACGTCAAGTCTGAACAAGGGGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543932       --> TCACGCCGTGTTTGGAAGGAATGAAGAATGTCAAGTCTGAACAAGGGGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949505       --> TCACCCCGTGTTTGGAAAGAATGAAGAATGTCAAGCCTGAACAAGGGGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD955135       --> TCACCCCGTGTTTGGAAGGAATGAAGAATGTCAAGTCTGAACAAGGGGAG  Raphanus sativus cv Rat-Tail Radish #3870
EW733742       --> TCACCCCGTGTTTGGAGGGAATGAAGAATGTCAAGTCTGAACAAGGGGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD536495       --> TCACGCCGTGTTTGGAAGGAATGAAGAACGTCAAGTCTGAACAAGGGGAG  Raphanus raphanistrum subsp. maritimus
EW731480       --> TCACGCCGTGTTTGGAAGGAATGAAGAATGTCGAGTCTGAACAAGGGGAG  Raphanus sativus cv Rat-Tail Radish #3870
EY925440       --> TCACGCCGTGTTTGGAAGGAATGAAGAATGTCAAGTCTGAACAAGGGGAG  Raphanus raphanistrum subsp. landra
EY929818       --> TCACGCCGTGTTTGGAAGGAATGAAGAATGTCAAGTCTGAACAAGGGGAG  Raphanus sativus var. oleiformis
EY938712       --> TCACCCCGTGTTTGGAAGGAATGAAGAATGTCAAGTCTGAACAAGGGGAG  Raphanus sativus cv Early Scarlet Globe
FD937969       --> TCACCCCGTGTTTGGAAGGAATGAAGAATGTCAAGTCTGAACAAGGGGAG  Raphanus sativus var. oleiformis
EY940548       --> TCACCCCGTGTTTGGAAGGAATGAAGAATGTCAAGTCTGAACAAGGGGAG  Raphanus sativus cv Early Scarlet Globe
EW715128       --> TCACGCCGTGTTTGGAAGGAATGAAGAATGTCAAGTCTGAACAAGGGGAG  Raphanus sativus var. oleiformis
EX887655       --> TCACGCCGTGTTTGGAAGGAATGAAGAATGTCAAGTCTGAACAAGGGGAG  Raphanus sativus var. oleiformis
FD964288       --> TCACGCCGTGTTTGGAAGGAATGAAGAACGTCAAGTCTGAACAAGGGGAG  Raphanus raphanistrum subsp. maritimus
EV524544       --> TCACGCCGTGTTTGGAAGGAATGAAGAACGTCAAGTCTGAACAAGGGGAG  Raphanus raphanistrum subsp. maritimus
FD552118       --> TCACGCCGTGTTTGGAAGGAATGAAGAATGTCAAGTCTGAACAAGGGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566316       --> TCACCCCGTGTTTGGAAGGAATGAAGAATGTCAAGTCTGAACAAGGGGAG  Raphanus raphanistrum subsp. landra
EX904034       --> TCACGCCGTGTTTGGAAGGAATGAAGGATGTCAAGTCTGAACAAGGGGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD955124       --> TCACCCCGTGTTTGGAAGGAATGAAGAATGTCAAGTCTGAACAAGGGGAG  Raphanus sativus cv Rat-Tail Radish #3870
FY428532       --> TCACCCCGTGTTTGGAAGGAATGAAGAATGTCAAGTCTGAACAAGGGGAG  Raphanus sativus cv GSK3-1
EX765327       --> TCACGCCGTGTTTGGAAGGAATGAAGAATGTCAAGTCTGAACAAGGGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538592       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW722932       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD946634       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               201    -    251
UN23425        --> ATGCTTACTAAGCCTTTTCTAGACCTCTGCAAGACCATCTTGCCTGTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529518       <-- ATGCTTACTAAGCCTTTTCTAGACCTCTGCAAGACCATCTTGCCTGTTAT
FD547946       <-- ATGCTTACTAAACCTTTTCTTGACCTCTGCAAGACCATCTTGCCTGTTAT
EW727691       <-- ATGCTTACTAAGCCTTTTCTAGACCTCTGCAAGACCATCTTGCCTGTTAT
EX891757       <-- ATGCTTACTAAGCCTTTTCTAGACCTCTGCAAGACCATCTTGCCTGTTAT
EY936294       <-- ATGCTTACTAAGCCTTTTCTAGACCTCTGCAAGACCATCTTGCCTGTTAT
FD959025       <-- ATGCTTACTAAGCCTTTTCTTGACCTCTGCAAGACCATCTTGCCTGTTAT
EV542568       <-- .........gAGCCTTTTCTAGACCTCTGCAAGACCATCTTGCCTGTTAT
FD934472       <-- ......................................CTTGCCTGTTAT
EY920917       <-- ...............................................TAT
FD537503       <-- ...............................................TAT
EW719811       <-- ..................................................
FD539651       <-- ..................................................
EY919217       <-- ..................................................
FD962474       --> ATGCTTACTAAGCCTTTTCTTGACCTCTGCAAGACCATCTTGCCTGTTAT
FD544019       --> ATGCTTACTAAGCCTTTTCTAGACCTCTGCAAGACCATCTTGCCTGTTAT
FD543932       --> ATGCTTACTAAGCCTTTTCTAGACCTCTGCAAGACCATCTTGCCTGTTAT
EY949505       --> ATGCTTACTAAGCCTTTTCTAGACCTCTGCAAGACCATCTTGCCTGTTAT
FD955135       --> ATGCTTACTAAGCCTTTTCTAGACCTCTGCAAGACCATCTTGCCTGTTAT
EW733742       --> ATGCTTACTAAGCCTTTTCTAGACCTCTGCAAGACCATCTTGCCTGTTAT
FD536495       --> ATGCTTACTAAGCCTTTTCTAGACCTCTGCAAGACCATCTTGCCTGTTAT
EW731480       --> ATGCTTACTAAGCCTTTTCTAGACCTCTGCAAGACCATCTTGCCTGTTAT
EY925440       --> ATGCTTACTAAGCCTTTTCTGGACCTCTGCAAGACCATCTTGCCTGTTAT
EY929818       --> ATGCTTACTAAGCCTTTTCTAGACCTCTGCAAGACCATCTTGCCTGTTAT
EY938712       --> ATGCTTACTAAGCCTTTTCTTGACCTCTGCAAGACCATCTTGCCTGTTAT
FD937969       --> ATGCTTACTAAGCCTTTTCTAGACCTCTGCAAGACCATCTTGCCTGTTAT
EY940548       --> ATGCTTACTAAGCCTTTTCTAGACCTCTGCAAGACCATCTTGCCTGTTAT
EW715128       --> ATGCTTACTAAGCCTTTTCTAGACCTCTGCAAGACCATCTTGCCTGTTAT
EX887655       --> ATGCTTACTAAGCCTTTTCTAGACCTCTGCAAGACCATCTTGCCTGTTAT
FD964288       --> ATGCTTACTAAGCCTTTTCTAGACCTCTGCAAGACCATCTTGCCTGTTAT
EV524544       --> ATGCTTACTAAGCCTTTTCTAGACCTCTGCAAGACCATCTTGCCTGTTAT
FD552118       --> ATGCTTACTAAACCTTTTCTTGACCTCTGCAAGACCATCTTGCCTGTTAT
EV566316       --> ATGCTTACTAAGCCTTTTCTAGACCTCTGCAAGACCATCTTGCCTGTTAT
EX904034       --> ATGCTTACTAAGCCTTTTCTAGACCTCTGCAAGACCATCTTGCCTGTTAT
FD955124       --> ATGCTTACTAAGCCTTTTCTAGACCTCTGCAAGACCATCTTGCCTGTTAT
FY428532       --> ATGCTTACTAAGCCTTTTCTAGACCTCTGCAAGACCATCTTGCCTGTTAT
EX765327       --> ATGCTTACTAAGCCTTTTCTAGACCTCTGCAAGACCATCTTGCCTGTTAT
EV538592       --> .........gAGCCTTTTCTAGACCTCTGCAAGACCATCTTGCCTGTTAT
EW722932       --> ................................................AT
FD946634       --> ..................................................

               251    -    301
UN23425        --> AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529518       <-- AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGTA
FD547946       <-- AGACAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
EW727691       <-- AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
EX891757       <-- AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
EY936294       <-- AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
FD959025       <-- AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
EV542568       <-- AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
FD934472       <-- AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
EY920917       <-- AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
FD537503       <-- AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
EW719811       <-- ..................................................
FD539651       <-- ..................................................
EY919217       <-- ..................................................
FD962474       --> AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
FD544019       --> AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
FD543932       --> AGATAAATTTGGAGCCGCTATGACTCTCGTCAAAGCTGACATTGGTGGCA
EY949505       --> AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
FD955135       --> AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
EW733742       --> AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
FD536495       --> AGATAAGTTTGGAGCCGCTATGACTCTCGTGAATGCTGACATTGGTAGCA
EW731480       --> AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
EY925440       --> AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
EY929818       --> AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCCGACATTGGTGGCA
EY938712       --> AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
FD937969       --> AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
EY940548       --> AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
EW715128       --> AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
EX887655       --> AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
FD964288       --> AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
EV524544       --> AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGTA
FD552118       --> AGACAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
EV566316       --> AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
EX904034       --> AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
FD955124       --> AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
FY428532       --> AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
EX765327       --> AGATAAATTTGGAGCCGCTATGACTCTCGTCAAAGCTGACATTGGTGGCA
EV538592       --> AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
EW722932       --> AGATAAGTTTGGAGCCGCTATGACTCTCGTGAAAGCTGACATTGGTGGCA
FD946634       --> ..................................................

               301    -    351
UN23425        --> ACATATCGAGGTTGGAGAAGAACTACTTGTCTGATCCCGACAAGTACAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529518       <-- ACATATCGAGGTTGGAGAAGAACTACTTGTCTGATCCCGACAAGTACAAG
FD547946       <-- ACATATCGAGGTTGGAGAAGAACTACTTGTCTGATCCCGACAAGTACAAG
EW727691       <-- ACATATCGAGGTTGGAGAAGAACTACTTGTCTGATCCCGACAAGTACAAG
EX891757       <-- ACATATCGAGGTTGGAGAAGAACTACTTGTCCGATCCGGACAAGTACAAG
EY936294       <-- ACATATCGAGGTTGGAGAAGAACTACTTGTCTGATCCCGACAAGTACAAG
FD959025       <-- ACATTTCGAGGTTGGAGAAGAACTACTTGTCTGACCCCGACAAGTACAAG
EV542568       <-- ACATATCGAGGTTGGAGAAGAACAACTTGTCTGATCCCGACAAGTACAAG
FD934472       <-- ACATATCGAGGTTGGAGAAGAACTACTTGTCTGATCCCGACAAGTACAAG
EY920917       <-- ACATATCGAGGTTGGAGAAGAACTACTTGTCTGATCCCGACAAGCACAAG
FD537503       <-- ACATATCGAGGTTGGAGAAGAACTACTTGTCTGATCCCGACAAGTACAAG
EW719811       <-- ..................................................
FD539651       <-- ..................................................
EY919217       <-- ..................................................
FD962474       --> ACATTTCGAGGTTGGAGAAGAACTACTTGTCTGACCCCGACAAGTACAAG
FD544019       --> ACATATCGAGGTTGGAGAAGAACTACTTGTCTGATCCCGACAAGTACAAG
FD543932       --> ACATATCGAGGTTGGAGAAGAACTACTTGTCTGACCCCGACAAGTACAAG
EY949505       --> ACATATCGAGGTTGGAGAAGAACTACTTGTCTGATCCGGACAAGTACAAG
FD955135       --> ACATATCGAGGTTGGAGAAGAACTACTTGTCTGATCCGGACAAGTACAAG
EW733742       --> ACATATCGAGGTTGGAGAAGAACTACTTGTCTGATCCGGACAAGTACAAG
FD536495       --> ACATATCGAGGTTGGAGAAGAACTACTTGTCTGATCCCGACAAGTACAAG
EW731480       --> ACATATCGAGGTTGGAGAAGAACTACTTGTCTGATCCGGACAAGTACAAG
EY925440       --> ACATATCGAGGTTGGAGAAGAACTACTTGTCTGATCCCGACAAGCACAAG
EY929818       --> ACATATCGAGGTTGGAGAAGAACTACTTATCTGATCCGGACAAGTACAAG
EY938712       --> ACATATCGAGGTTGGAGAAGAACTACTTGTCTGATCCCGACAAGTACAAG
FD937969       --> ACATATCGAGGTTGGAGAAGAACTACTTGTCTGATCCCGACAAGTACAAG
EY940548       --> ACATATCGAGGTTGGAGAAGAACTACTTGTCTGATCCCGACAAGTACAAG
EW715128       --> ACATATCGAGGTTGGAGAAGAACTACTTGTCTGATCCGGACAAGTACAAG
EX887655       --> ACATATCGAGGTTGGAGAAGAACTACTTGTCCGATCCGGACAAGTACAAG
FD964288       --> ACATATCGAGGTTGGAGAAGAACTACTTGTCTGATCCCGACAAGTACAAG
EV524544       --> ACATATCGAGGTTGGAGAAGAACTACTTGTCTGATCCCGACAAGTACAAG
FD552118       --> ACATATCGAGGTTGGAGAAGAACTACTTGTCTGATCCCGACAAGTACAAG
EV566316       --> ACATATCGAGGTTGGAGAAGAACTACTTGTCTGATCCGGACAAGTACAAG
EX904034       --> ACATATCGAGGTTGGAGAAGAACTACTTGTCTGATCCGGACAAGTACAAG
FD955124       --> ACATATCGAGGTTGGAGAAGAACTACTTGTCTGATCCGGACAAGTACAAG
FY428532       --> ACATATCGAGGTTGGAGAAGAACTACTTGTCTGATCCGGACAAGTACAAG
EX765327       --> ACATATCGAGGTTGGAGAAGAACTACTTGTCTGACCCCGACAAGTACAAG
EV538592       --> ACATATCGAGGTTGGAGAAGAACAACTTGTCTGATCCCGACAAGTACAAG
EW722932       --> ACATATCGAGGTTGGAGAAGAACTACTTGTCTGATCCCGACAAGTACAAG
FD946634       --> ..................................................

               351    -    401
UN23425        --> TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTCTAAGACAGCAAAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529518       <-- TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTCGAAGACAGCAAAAGG  Raphanus raphanistrum subsp. maritimus
FD547946       <-- TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTCGAAGACAGCAAAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727691       <-- TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTTTAAGACAGCAAAAGG  Raphanus sativus cv Early Scarlet Globe
EX891757       <-- TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTTTAAGACAGCAAAAGG  Raphanus sativus var. oleiformis
EY936294       <-- TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTCTAAGACAGCAAAAGG  Raphanus sativus cv Early Scarlet Globe
FD959025       <-- TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTCGAAGACAGCAAAAGG  Raphanus raphanistrum subsp. maritimus
EV542568       <-- TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTCGAAGACAGCAAAAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD934472       <-- TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTCTAAGACAGCAAAAGG  Raphanus sativus var. oleiformis
EY920917       <-- TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTCTAAGACTGCAAAAGG  Raphanus raphanistrum subsp. landra
FD537503       <-- TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTCGAAGACAGCAAAAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW719811       <-- .............................TGAGTCTAAGACAGCAAAAGG  Raphanus sativus var. oleiformis
FD539651       <-- ....................................AAGACAGCAAAAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919217       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD962474       --> TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTCGAAGACAGCAAAAGG  Raphanus raphanistrum subsp. maritimus
FD544019       --> TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTCGAAGACAGCAAAAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543932       --> TACTTGTGCACCTTTGTTCAAGGTGAAATTGAGTCGAAGACAGCAAAAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949505       --> TACTTGTACACATTTGTTCAAGGTGAAATTGAGTCTAAGACAGCAAAAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD955135       --> TACTTGTACACATTTGTTCAAGGTGAAATTGAGTCTAAGACAGCAAAAGG  Raphanus sativus cv Rat-Tail Radish #3870
EW733742       --> TACTTGTACACCTTTGCTCAAGGTGAAATTGAGTCTAAGACAGCAAAAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD536495       --> TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTCGAAGACAGCAAAAGG  Raphanus raphanistrum subsp. maritimus
EW731480       --> TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTCTAAGACAGCAAAAGG  Raphanus sativus cv Rat-Tail Radish #3870
EY925440       --> TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTCTAAGACTGCAAAAGG  Raphanus raphanistrum subsp. landra
EY929818       --> TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTCTAAGACAGCAAAAGG  Raphanus sativus var. oleiformis
EY938712       --> TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTCTAAGACAGCAAAAGG  Raphanus sativus cv Early Scarlet Globe
FD937969       --> TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTCTAAGACAGCAAAAGG  Raphanus sativus var. oleiformis
EY940548       --> TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTCTAAGACAGCAAAAGG  Raphanus sativus cv Early Scarlet Globe
EW715128       --> TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTCTAAGACAGCAAAAGG  Raphanus sativus var. oleiformis
EX887655       --> TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTCTAAGACAGCAAAAGG  Raphanus sativus var. oleiformis
FD964288       --> TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTCGAAGACAGCAAAAGG  Raphanus raphanistrum subsp. maritimus
EV524544       --> TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTCGAAGACAGCAAAAGG  Raphanus raphanistrum subsp. maritimus
FD552118       --> TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTCGAAGACAGCAAAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566316       --> TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTC...............  Raphanus raphanistrum subsp. landra
EX904034       --> TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTCTAAGACAGCAAAAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD955124       --> TACTTGTACACATTTGTTCAAGGTGAAATTGAGTCTAAGACAGCAAAAGG  Raphanus sativus cv Rat-Tail Radish #3870
FY428532       --> TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTCTAAGACAGCAAAAGG  Raphanus sativus cv GSK3-1
EX765327       --> TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTCTAAGACAGCAAAAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538592       --> TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTCGAAGACAGCAAAAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW722932       --> TACTTGTACACCTTTGTTCAAGGTGAAATTGAGTCTAAGACAGCAAAAGG  Raphanus sativus cv Early Scarlet Globe
FD946634       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               401    -    451
UN23425        --> ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529518       <-- ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
FD547946       <-- ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
EW727691       <-- ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
EX891757       <-- ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
EY936294       <-- ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
FD959025       <-- ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
EV542568       <-- ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCGATGGATT
FD934472       <-- ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
EY920917       <-- ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
FD537503       <-- ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
EW719811       <-- ATCGTCTAGTTGTACCAACGGTCCTCTCTGGTTAACCAGAGCAATGGATT
FD539651       <-- ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
EY919217       <-- ..................................................
FD962474       --> ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
FD544019       --> ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
FD543932       --> ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
EY949505       --> ATCGTCTAGTTGTGCCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
FD955135       --> ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
EW733742       --> ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
FD536495       --> ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
EW731480       --> ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
EY925440       --> ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
EY929818       --> ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
EY938712       --> ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGGTT
FD937969       --> ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
EY940548       --> ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
EW715128       --> ATCGTCTAGTTGTACCAACGGTCCTCTCTGGTTAACCAGAGCAATGGATT
EX887655       --> ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
FD964288       --> ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
EV524544       --> ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
FD552118       --> ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
EV566316       --> ..................................................
EX904034       --> ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
FD955124       --> ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
FY428532       --> ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
EX765327       --> ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
EV538592       --> ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCGATGGATT
EW722932       --> ATCGTCTAGTTGTACCAACGGTCTTCTCTGGTTAACCAGAGCAATGGATT
FD946634       --> ..................................................

               451    -    501
UN23425        --> TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529518       <-- TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCGCATCAAGACTGGCCAATG
FD547946       <-- TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
EW727691       <-- TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
EX891757       <-- TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
EY936294       <-- TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
FD959025       <-- TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
EV542568       <-- TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
FD934472       <-- TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
EY920917       <-- TCTTAGTGGAGCTGTTCCGCAACTTAGTAGCACATCAAGACTGGCCAATG
FD537503       <-- TCTTAGTGGAGCTGTTCCGCAACTTGGTAGTACATCAAGACTGGCCAATG
EW719811       <-- TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
FD539651       <-- TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
EY919217       <-- ..................................................
FD962474       --> TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
FD544019       --> TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
FD543932       --> TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
EY949505       --> TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
FD955135       --> TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
EW733742       --> TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
FD536495       --> TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
EW731480       --> TCTTAGTGGAACTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
EY925440       --> TCTTAGTGGAGCTGTTCCGCAACTTAGTAGCACATCAAGACTGGCCAATG
EY929818       --> TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
EY938712       --> TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
FD937969       --> TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
EY940548       --> TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
EW715128       --> TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
EX887655       --> TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
FD964288       --> TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
EV524544       --> TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCGCATCAAGACTGGCCAATG
FD552118       --> TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
EV566316       --> ..................................................
EX904034       --> TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
FD955124       --> TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
FY428532       --> TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
EX765327       --> TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
EV538592       --> TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
EW722932       --> TCTTAGTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG
FD946634       --> TCTTATTGGAGCTGTTCCGCAACTTGGTAGCACATCAAGACTGGCCAATG

               501    -    551
UN23425        --> TCACAGGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529518       <-- TCACAAGCTTGTG-TGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus raphanistrum subsp. maritimus
FD547946       <-- TCACAAGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727691       <-- TCACAGGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus sativus cv Early Scarlet Globe
EX891757       <-- TCACAGGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus sativus var. oleiformis
EY936294       <-- TCACAGGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus sativus cv Early Scarlet Globe
FD959025       <-- TCACAGGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGG--CG  Raphanus raphanistrum subsp. maritimus
EV542568       <-- TCACAAGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD934472       <-- TCACAGGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus sativus var. oleiformis
EY920917       <-- TCACAAGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus raphanistrum subsp. landra
FD537503       <-- TCACAAGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW719811       <-- TCACAGGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus sativus var. oleiformis
FD539651       <-- TCACAAGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919217       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD962474       --> TCACAGGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGC--G  Raphanus raphanistrum subsp. maritimus
FD544019       --> TCACAAGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543932       --> TCACAAGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949505       --> TCACAGGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus sativus cv Rat-Tail Radish #3870
FD955135       --> TCACAGGCTTGTGGTGAATCTTACCAAAAAAACACTCAAGAAATGGCACG  Raphanus sativus cv Rat-Tail Radish #3870
EW733742       --> TCACAAGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus sativus cv Rat-Tail Radish #3870
FD536495       --> TCACAAGCTTGTGGCGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus raphanistrum subsp. maritimus
EW731480       --> TCACAAGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus sativus cv Rat-Tail Radish #3870
EY925440       --> TCACAAGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus raphanistrum subsp. landra
EY929818       --> TCACAGGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus sativus var. oleiformis
EY938712       --> TCACAGGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus sativus cv Early Scarlet Globe
FD937969       --> TCACAGGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus sativus var. oleiformis
EY940548       --> TCACAGGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus sativus cv Early Scarlet Globe
EW715128       --> TCACAGGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus sativus var. oleiformis
EX887655       --> TCACAGGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus sativus var. oleiformis
FD964288       --> TCACAAGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus raphanistrum subsp. maritimus
EV524544       --> TCACAAGCTTGTG-TGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus raphanistrum subsp. maritimus
FD552118       --> TCACAAGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566316       --> ..................................................  Raphanus raphanistrum subsp. landra
EX904034       --> TCACAAGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus sativus cv Rat-Tail Radish #3870
FD955124       --> TCACAGGCTTGTGGTGAATCTTACCAAAAAAACACTCAAGAAATGGCACG  Raphanus sativus cv Rat-Tail Radish #3870
FY428532       --> TCACAGGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus sativus cv GSK3-1
EX765327       --> TCACAAGCTTGTGGCGAATCTTACCAAGAAA-CACTCAAGAAATGGCACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538592       --> TCACAAGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW722932       --> TCACAGGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus sativus cv Early Scarlet Globe
FD946634       --> TCACAGGCTTGTGGTGAATCTTACCAAAAAA-CACTCAAGAAATGGCACG  Raphanus sativus cv Early Scarlet Globe

               551    -    601
UN23425        --> GATGGCTCGCCAGCTCTACCTTCTCTATGGCGTTAAAGCTTGCTCCAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529518       <-- GATGGCTCGCCAGCTCTACCTTCTCTATGGCGTTAAAGCTTGCTCCAGAC  Raphanus raphanistrum subsp. maritimus
FD547946       <-- GATGGCTCGCCAGCTCCACCTTCTCTATGGCGTTAAAGCTTGCTCCAGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727691       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX891757       <-- GATGGCTCGCCAGCTCTACCTTCTCTATGGCGTTAAAGCTTGCTCCAGAC  Raphanus sativus var. oleiformis
EY936294       <-- GATGGCTCGCCAGCTCTACCTTCTCTATGGCCTTAAAGCTTGCTCCAGAC  Raphanus sativus cv Early Scarlet Globe
FD959025       <-- GATGGCTCGCCAGCTCTACCTTCTCTATGGCCTTAAAGCTTGCTCCAGAC  Raphanus raphanistrum subsp. maritimus
EV542568       <-- GATGGCTCGCCAGCTCTACCTTCTCTATGGCGTTAAAGCTTGCTCCAGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD934472       <-- GATGGCTCGCCAGCTCTACCTTCTCTATGGCCTTAAAGCTTGCTCCAGAC  Raphanus sativus var. oleiformis
EY920917       <-- GATGGCTCGCCAGCTCCACCTTCTCTATGGCGTTAAAGCTTGCTCCAGAC  Raphanus raphanistrum subsp. landra
FD537503       <-- GATGGCTCGCCAGCTCTACCTTCTCTATGGCGTTAAAGCTTGCTCCAGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW719811       <-- GATGGCTCGCCAGCTCTACCTTCTCTATGGCGTTAAAGCTTGCTCCAGAC  Raphanus sativus var. oleiformis
FD539651       <-- GATGGCTCGCCAGCTCTACCTTCTCTATGGCCTT--AGCTTGCTCCAGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919217       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD962474       --> GATGGCTCGCCAGCTCTACCTTCTCTATGGCCTTAAAGCTTGCTCCAGAC  Raphanus raphanistrum subsp. maritimus
FD544019       --> GATGGCTCGCCAGCTCTACCTTCTCTATGGCGTTAAAGCTTGCTCCAGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543932       --> GATGGCTCGCCAGCTCTACCTTCTCTATGGCCTTA--GCTTGCTCCAGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949505       --> GATGGCTCGCCAGCTCTACCTTCTCTATGGCCTTAAAGCTTGCTCCAGAC  Raphanus sativus cv Rat-Tail Radish #3870
FD955135       --> GATGGCTCGCCAGCTCTACCTTCTCTATGGCCTTAAAGCTTGCTCCAGAC  Raphanus sativus cv Rat-Tail Radish #3870
EW733742       --> GATGGCTTGCCAGCTCTACCTTCTCTATGGCTTTAAAGCTTGCTCCAGAC  Raphanus sativus cv Rat-Tail Radish #3870
FD536495       --> GATGGCTCGCCAGCTCTACCTTCTCTATGGCGTTAAAGCTTGCTCCAGAC  Raphanus raphanistrum subsp. maritimus
EW731480       --> GATGGCTTGCCAGCTCTACCTTCTCTATGGCTTTAAAGCTTGCTCCAGAC  Raphanus sativus cv Rat-Tail Radish #3870
EY925440       --> GATGGCTCGCCAGCTCCACCTTCTCTATGGCGTTAAAGCTTGCTCCAGAC  Raphanus raphanistrum subsp. landra
EY929818       --> GATGGCTCGCCAGCTCTACCTTCTCTATGGCGTTAAAGCTTGCTCCAGAC  Raphanus sativus var. oleiformis
EY938712       --> GATGGCTCGCCAGCTCTACCTTCTCTATGGCCTTAAAGCTTGCTCCAGAC  Raphanus sativus cv Early Scarlet Globe
FD937969       --> GATGGCTCGCCAGCTCTACCTTCTCTATGGCCTTAAAGCTTGCTCCAGAC  Raphanus sativus var. oleiformis
EY940548       --> GATGGCTCGCCAGCTCTACCTTCTCTATGGCCTTAAAGCTTGCTCCAGAC  Raphanus sativus cv Early Scarlet Globe
EW715128       --> GATGGCTCGCCAGCTCTACCTTCTCTATGGCGTTAAAGCTTGCTCCAGAC  Raphanus sativus var. oleiformis
EX887655       --> GATGGCTCGCCAGCTCTACCTTCTCTATGGCGTTAAAGCTTGCTCCAGAC  Raphanus sativus var. oleiformis
FD964288       --> GATGGCTCGCCAGCTCTACCTTCTCTATGGCGTTAAAGCTTGCTCCAGAC  Raphanus raphanistrum subsp. maritimus
EV524544       --> GATGGCTCGCCAGCTCTACCTTCTCTATGGCGTTAAAGCTTGCTCCAGAC  Raphanus raphanistrum subsp. maritimus
FD552118       --> GATGGCTCGCCAGCTCCACCTTCTCTATGGCGTTAAAGCTTGCTCCAGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566316       --> ..................................................  Raphanus raphanistrum subsp. landra
EX904034       --> GATGGCTTGCCAGCTCTACCTTCTCTATGGCTTTAAAGCTTGCTCCAGAC  Raphanus sativus cv Rat-Tail Radish #3870
FD955124       --> GATGGCTCGCCAGCTCTACCTTCTCTATGGCCTTAAAGCTTGCTCCAGAC  Raphanus sativus cv Rat-Tail Radish #3870
FY428532       --> GATGGCTCGCCAGCTCTACCTTCTCTATGGCGTTAAAGCTTGCTCCAGAC  Raphanus sativus cv GSK3-1
EX765327       --> GATGGCTCGCCAGCTCTACCTTCTCTATGGCCTTAAAGCTTGCTCCAGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538592       --> GATGGCTCGCCAGCTCTACCTTCTCTATGGCGTTAAAGCTTGCTCCAGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW722932       --> GATGGCTCGCCAGCCCTACCTTCTCTATGGCCTTAAAGCTTGCTCCAGAC  Raphanus sativus cv Early Scarlet Globe
FD946634       --> GATGGCTCGCCAGCTCTACCTTCTCTATGGCCTTAAAGCTTGCTCCAGAC  Raphanus sativus cv Early Scarlet Globe

               601    -    651
UN23425        --> AGGAAGAAGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529518       <-- AGGAAGAAGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
FD547946       <-- AGGAAGAAGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
EW727691       <-- ..................................................
EX891757       <-- AGGAAGAAGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
EY936294       <-- AGGAAGAGGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
FD959025       <-- AGGAAGAAGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
EV542568       <-- AGGAAGAAGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
FD934472       <-- AGGAAGAAGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
EY920917       <-- AGGAAGAAGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
FD537503       <-- AGGAAGAAGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
EW719811       <-- AGGAAGAAGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
FD539651       <-- AGGAAGAAGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
EY919217       <-- ............................GG-TTCTGGTGACATATACGCT
FD962474       --> AGGAAGAAGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
FD544019       --> AGGAAGAAGTTCATGG-ATGTCATATC.......................
FD543932       --> AGGAAGAAGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
EY949505       --> AGGAAGAAGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
FD955135       --> AGGAAGAAGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
EW733742       --> AGGAAGAAGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
FD536495       --> AGGAAGAAGTTCGTGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
EW731480       --> AGGAAGAAGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
EY925440       --> AGGAAGAAGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
EY929818       --> AGGAAGAAGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
EY938712       --> AGGAAGAAGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
FD937969       --> AGGAAGAAGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
EY940548       --> AGGAAGAGGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
EW715128       --> AGGAAGAAGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
EX887655       --> AGGAAGAAGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
FD964288       --> AGGAAGAAGTTCATGG-ATGTCAT..........................
EV524544       --> AGGAAGAAGTTCATGG-ATGTCATATCTGGGTTCTGGTGACATATACGCT
FD552118       --> AGGAAGAAGTTC......................................
EV566316       --> ..................................................
EX904034       --> AGGAAGAAGTTCATGG-ACGTCATATCTGG-TTCTGGTGACATATACGCT
FD955124       --> AGGAAGAAGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
FY428532       --> AGGAAGAAGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
EX765327       --> AGGAAGAAGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
EV538592       --> AGGAAGAAGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT
EW722932       --> AGGAAGAAGTTCATGGGATGTCATATCTGG-TTCTGGTGACATATACGCT
FD946634       --> AGGAAGAAGTTCATGG-ATGTCATATCTGG-TTCTGGTGACATATACGCT

               651    -    701
UN23425        --> GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCCTTCAAGAAAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529518       <-- GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCCTT..........
FD547946       <-- GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCCTTCAAGAAAATC
EW727691       <-- ..................................................
EX891757       <-- GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCCTTCAAGAAAATC
EY936294       <-- GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCCTTCAAGAAAATC
FD959025       <-- GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCCTTCAAGAAAATC
EV542568       <-- GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCTTTCAAGAAAATC
FD934472       <-- GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCCTTCAAGAAAATC
EY920917       <-- GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCCTTCAAGAAAATC
FD537503       <-- GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCCTTCAAGAAAATC
EW719811       <-- GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCCTTCAAGAAAATC
FD539651       <-- GACATGG-AAAGGTTTCGCACTGACTTTGGTCCATTCCTTCAAGAAAATC
EY919217       <-- GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCCTTCAAGAAAATC
FD962474       --> GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCCTTCAAGAAAATC
FD544019       --> ..................................................
FD543932       --> GACATGG-AAAGGTTTCGCACTGACTTTGGTCCATTCCTTCAAGAAAATC
EY949505       --> GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCCTTCAAGAAAATC
FD955135       --> GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCCTTCAAGAAAATC
EW733742       --> GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCCTCCAAGAAAATC
FD536495       --> GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCCTTCAAGAAAATC
EW731480       --> GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCCTTCAAGAAAATC
EY925440       --> GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCCTTCAAGAAAATC
EY929818       --> GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCCTTCAAGAAAATC
EY938712       --> GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCCTTCAAGAAAATC
FD937969       --> GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCCTTCAAGAAAATC
EY940548       --> GAC...............................................
EW715128       --> GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCCTTCAAGAAAATC
EX887655       --> GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCCTTCAAGAAAATC
FD964288       --> ..................................................
EV524544       --> GACATGGGAAAGGTTTTGCACTGAGTTTGGTCCATTCCTTCAAGAAAATC
FD552118       --> ..................................................
EV566316       --> ..................................................
EX904034       --> GACATGG-AAAGGTTTTGTACTGAGTTTGGTCCATTCCTTCAAGAAAATC
FD955124       --> GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCCTTCAAGAAAATC
FY428532       --> GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCCTTCAAGAAAATC
EX765327       --> GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCCTTCAAGAAAATC
EV538592       --> GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCTTTCAAGAAAATC
EW722932       --> GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCCTTCAAGAAAATC
FD946634       --> GACATGG-AAAGGTTTTGCACTGAGTTTGGTCCATTCCTTCAAGA.....

               701    -    751
UN23425        --> ATAAGTTTCTGGCTAGCGTTGGTTTGGATGACCTGAAAGCTTCTTGAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529518       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD547946       <-- ATAAGTTTCTGGCTAGCGTTGGTTTGGATGACCTGAAAGCTTCTTGAGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727691       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX891757       <-- ATAAGTTTCTGGCTAGCGTTGGTTTGGATGACCTGAAAGCTTCTTGAGGC  Raphanus sativus var. oleiformis
EY936294       <-- ATAAGTTTCTGGCTAGCGTTGGTTTGGATGACCTGAAAGCTTCTTGAGCC  Raphanus sativus cv Early Scarlet Globe
FD959025       <-- ATAAGTTTCTGGCTAGCGTTGGTTTGGATGACCTGAAAGCTTCTTGAGCC  Raphanus raphanistrum subsp. maritimus
EV542568       <-- ATAAGTTTCTGGCTATCGTTGGTTTGGATGACTTGAAAGCTTCTTGAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD934472       <-- ATAAGTTTCTGGCTAGCGTTGGTTTGGATGACCTGAAAGCTTCTTGAGTC  Raphanus sativus var. oleiformis
EY920917       <-- ATAAGTTTCTGGCTAGCGTTGGTTTGGATGACCTGAAAGCTTCTTGAGCC  Raphanus raphanistrum subsp. landra
FD537503       <-- ATAAGTTTCTGGCTAGCGTTGGTTTGGATGACTTGAAAGCTTCTTGAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW719811       <-- ATAAGTTTCTGGCTAGCGTTGGTTTGGATGACCTGAAAGCTTCTTGAGGC  Raphanus sativus var. oleiformis
FD539651       <-- ATAAGTTTCTGGCTAGCGTTGGTTTGGATGACCTGAAAGCTTCTTGAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919217       <-- ATAAGTTTCTGGCTAGCGTTGGTTTGGATGACCTGAAAGCTTCTTGAGCC  Raphanus raphanistrum subsp. landra
FD962474       --> ATAAGTT-CTGGCTAGCGTTGGTTTGGATGACCTGAAAGCTTCT-GAG-C  Raphanus raphanistrum subsp. maritimus
FD544019       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543932       --> ATAAGTTTCTGGCTAGCGTTGGTTTGGATGACCTGAAAGCTTCTTGAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949505       --> ATAAGTTTCTGGCTAGCGTTGGTTTGGATGACCTGAAAGCTTCTTGAGCC  Raphanus sativus cv Rat-Tail Radish #3870
FD955135       --> ATAAGTTTCTGGCTAGCGTTGGTTTGGATGACCTGAAAGCTTCTTGAGCC  Raphanus sativus cv Rat-Tail Radish #3870
EW733742       --> ATAAGTTTCTGGCTAGCGTTGGTTTGGATGACCTGAAAGCTTCTTGAGTC  Raphanus sativus cv Rat-Tail Radish #3870
FD536495       --> ATAAGTTTCTGGCTAGCGT-GG-TTGGATGACtgaagctctgagc.....  Raphanus raphanistrum subsp. maritimus
EW731480       --> ATAAGTTTCTGGCTAGCGTTGGTTTGGATGACCTGAAAGCTTCTTGAGTC  Raphanus sativus cv Rat-Tail Radish #3870
EY925440       --> ATAAGTTTCTGGCTAGCGTTGGTTTGGATGACCTGAAAGCTTCTTGAGCC  Raphanus raphanistrum subsp. landra
EY929818       --> ATAAGTTTCTGTCTA...................................  Raphanus sativus var. oleiformis
EY938712       --> ATAAGTTTCTGGCTAGCGTTGGTTTGGATGACCTGAAAGCTTCTTGAGCC  Raphanus sativus cv Early Scarlet Globe
FD937969       --> ATAAGTTTCTGGCTAGCGTTGGTTTGGATGACCTGAAAGCTTCTTGAGTC  Raphanus sativus var. oleiformis
EY940548       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW715128       --> ATAAGTTTCTGGCTAGCGTTGGTTTGGATGACCTGAAAGCTTCTTGAGGC  Raphanus sativus var. oleiformis
EX887655       --> ATAAGTTTCTGGCTAGCGTTGGTTTGGATGACCTGAAAGCTTCTTGAGGC  Raphanus sativus var. oleiformis
FD964288       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV524544       --> ATAAGTTTCTGGCTAGCGTTGGTTTGGATGACCTGAAAGCTTCTTGAGCC  Raphanus raphanistrum subsp. maritimus
FD552118       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566316       --> ..................................................  Raphanus raphanistrum subsp. landra
EX904034       --> ATAAGTTTCTGGCTAGCGTTGGTTTGGATGACCTGAAAGCTTCTTGAGTC  Raphanus sativus cv Rat-Tail Radish #3870
FD955124       --> ATAAGTTTCTGGCTAGCGTTGGTTTGGATGACCTGAAAGCTTCTTGAGCC  Raphanus sativus cv Rat-Tail Radish #3870
FY428532       --> ATAAGTTTCTGGCTAGCGTTGGTTTGGATGACCTGAAAGCTTCTTGAGGC  Raphanus sativus cv GSK3-1
EX765327       --> ATAAGTTTCTGGCTAGCGTTGGTTTGGATGACCTGAAAGCTTCTTGAGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538592       --> ATAAGTTTCTGGCTATCGTTGGTTTGGATGACTTGAAAGCTTCTTGAGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW722932       --> ATAAGTTTCTAGCTAGCGTTGGTTTGGATGACCTGA..............  Raphanus sativus cv Early Scarlet Globe
FD946634       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               751    -    801
UN23425        --> ATCATATGATTATCACCTGTATCCAATCTGCTTTTTTT-CAGAAAAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529518       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD547946       <-- ATCATATGATTATCACCTGTATCCAATCTGCTTTTTTT-CAGAAAAAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727691       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX891757       <-- ATCATATGATTATCACCTGTATCCAATCTACTTTTTTT-CAGAAAAAAAA  Raphanus sativus var. oleiformis
EY936294       <-- ATCATATGATTATCACCTGTATCCAATCTGCTTTTTTT-CAGAAAAAAA-  Raphanus sativus cv Early Scarlet Globe
FD959025       <-- ATCATATGATTATCACCTGTATCCAATCTGCTTTTTTT-CAGAAAAAAAA  Raphanus raphanistrum subsp. maritimus
EV542568       <-- ATCATATGATTATCACCTGTATCCAATCTGCTTTTTT--CAGAAAAAA--  Raphanus raphanistrum subsp. raphanistrum (MS)
FD934472       <-- ATCATATGATTATCACCTGTATCCAATCTGCTTTTTTT-CAGAAAAAAA-  Raphanus sativus var. oleiformis
EY920917       <-- ATCATATGATTATCACCTGTATCCAATCTGCTTTTTTT-CAGAAAAAAAA  Raphanus raphanistrum subsp. landra
FD537503       <-- ATCATATGATTATCACCTGTATCCAATCTGCTTTTTT--CAGAAAAAA--  Raphanus raphanistrum subsp. raphanistrum (MS)
EW719811       <-- ATCATATGATTATCACCTGTATCCAATCTACTTTTTTT-CAGAAAAAAAA  Raphanus sativus var. oleiformis
FD539651       <-- ATCATATGATTATCACCTGTATCCAATCTGCTTTTTTTTCAGAAAAAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919217       <-- ATCATATGATTATCACCTGTATCCAATCTGCTTTTTTT-CAGAAAAAAAA  Raphanus raphanistrum subsp. landra
FD962474       --> ATCATATGATTATCACCTGTATCCAATCTGCTTTTTT--CAGAAA.....  Raphanus raphanistrum subsp. maritimus
FD544019       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543932       --> ATCATATGATTATCACCTGTAT............................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949505       --> ATCATATGATTATCACCTGTATCCAATCTGCTTTTTT--CAGAAAAAAA.  Raphanus sativus cv Rat-Tail Radish #3870
FD955135       --> ATCATATGATTATCACCTGTATCCA-TCTGCTTTTTT--CAGAAAAAAAA  Raphanus sativus cv Rat-Tail Radish #3870
EW733742       --> ATCATATGATTATCACCTGTATCCAATCTGCTTTTTT--CAGAAAAAAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD536495       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW731480       --> ATCATATGATTATCACCTGTATCCAATCTGCTTTTTTT-CAGAAAAAAAA  Raphanus sativus cv Rat-Tail Radish #3870
EY925440       --> A.................................................  Raphanus raphanistrum subsp. landra
EY929818       --> ..................................................  Raphanus sativus var. oleiformis
EY938712       --> ATCATATGATTATCACCTGTATCCAATCTGCTTTTTT--CAGAAAAA---  Raphanus sativus cv Early Scarlet Globe
FD937969       --> ATCATATGATTATCACCTGTATCCAATCTGCTTTTTT.............  Raphanus sativus var. oleiformis
EY940548       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW715128       --> ATCATATGATTATCACCTGTATCCAATCTACTTTTTTT-CAG........  Raphanus sativus var. oleiformis
EX887655       --> ATCATATGATTATCACCTGTATCCAATCTACTTTTTTT-CAGAAAAAAAA  Raphanus sativus var. oleiformis
FD964288       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV524544       --> ATCATATGATTATCACCTGTATCCAATCTGCTTTTTTT-CAG........  Raphanus raphanistrum subsp. maritimus
FD552118       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566316       --> ..................................................  Raphanus raphanistrum subsp. landra
EX904034       --> ATCATATGATTATCACCTGTATCCAATCTGCTTTTTT--CAGAAAAA...  Raphanus sativus cv Rat-Tail Radish #3870
FD955124       --> ATCATATGATTATCACCTGTATCCAATCTGCTTTTTT--CAGAA......  Raphanus sativus cv Rat-Tail Radish #3870
FY428532       --> ATCATATGATTATCACCTGTATCCAATCTACTTTTTTT-CAGAAAAAAAA  Raphanus sativus cv GSK3-1
EX765327       --> ATCATATGATTATCACCTGTATCCAATCTGCTTTTTTc............  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538592       --> ATCATATGATTATCACCTGTATCCAATCTGCTTTTTT--CAGAAAAAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW722932       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD946634       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               801    -    851
UN23425        --> A-TTGTCTGTTTTAAAGTTTCTCCTTTGGATTCTAAAA--CTTTT-TAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529518       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD547946       <-- AATTGTCTGTTTTAAAGTTTCTCCTTTGGATTCTAAAA--CTTTT-TAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727691       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX891757       <-- A-TTGTCTGTTTCAAAGTTTCTCCTTTGGATTCTAAAA--CTTTT-TAGA  Raphanus sativus var. oleiformis
EY936294       <-- T-TTGTCTGTTTTAACGTTTCTCCTTTGGATTCTAAAAAACTTTTATAGT  Raphanus sativus cv Early Scarlet Globe
FD959025       <-- AATTGTCTGTTTTAAAGTTTCTCCTTTGGATTCTAAAA--CTTTT-TAGA  Raphanus raphanistrum subsp. maritimus
EV542568       <-- --CAGTCTGTTTTAACGTTTCTCCTTTGGATTCTAAAA--CTTTT-TAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD934472       <-- T-TTGTCTGTTTTAACGTTTCTCCTTTGGATTCTAAAAAACTTTTATAGT  Raphanus sativus var. oleiformis
EY920917       <-- A-TTGTCTGTTTTAAAGTTTCTCCTTTGGATTCTAAAA--CTTTT-TAGA  Raphanus raphanistrum subsp. landra
FD537503       <-- --CAGTCTGTTTTAACGTTTCTCCTTTGGATTCTAAAA--CTTTT-TAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW719811       <-- AATTGTCTGTTTCAAAGTTTCTCCTTTGGATTCTAAAA--CTTTT-TAGA  Raphanus sativus var. oleiformis
FD539651       <-- A-TTGTCTGTTTTAAAGTTTCTC-TTTGGATTCTAAAG--CTTTT-TAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919217       <-- A-TTGTCTGTTTTAAAGTTTTTCCTTTGGATTCTAAAA--CTTTT-TAGA  Raphanus raphanistrum subsp. landra
FD962474       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD544019       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543932       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949505       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD955135       --> --TTGTCTGTTT-AAAGTTTCTC-TTTGGATctagact............  Raphanus sativus cv Rat-Tail Radish #3870
EW733742       --> --TTGTCTGTTT-AAAGTTTCTCATTTGGAT-CTAAA---CTTTT--AGA  Raphanus sativus cv Rat-Tail Radish #3870
FD536495       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW731480       --> A-TTGTCTGTTTTAAAGTTTCTCATTTGGATTCTAAAA--CTTTT-TAGA  Raphanus sativus cv Rat-Tail Radish #3870
EY925440       --> ..................................................  Raphanus raphanistrum subsp. landra
EY929818       --> ..................................................  Raphanus sativus var. oleiformis
EY938712       --> T-TTGTCTG-TTTAACGTTTCTCCTTTGGATTCTAAAAa...........  Raphanus sativus cv Early Scarlet Globe
FD937969       --> ..................................................  Raphanus sativus var. oleiformis
EY940548       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW715128       --> ..................................................  Raphanus sativus var. oleiformis
EX887655       --> A-TTGTCTGTTTCAAAGTTTCTCCTTTGGATTCTAAAA--CTTTT-TAGA  Raphanus sativus var. oleiformis
FD964288       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV524544       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD552118       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566316       --> ..................................................  Raphanus raphanistrum subsp. landra
EX904034       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD955124       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY428532       --> AATTGTCTGTTTCAAAGTTTCTCCTTTGGATTCTAAAA--CTTTT-TAGA  Raphanus sativus cv GSK3-1
EX765327       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538592       --> ----GTCTGTTTTAACGTTTCTCCTTTGGATTCTAAAA--CTTTT-TAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW722932       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD946634       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               851    -    901
UN23425        --> CTAT--CCAAAGAAACAGAATAATGTTCTCACTTTATATTATAAAGTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529518       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD547946       <-- CTAT--CCAAAGAAACAGAATAATGTTCTCACTTTATA............  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727691       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX891757       <-- CTATATCCAAAGAAACAGAATAATGTT--CACTTTATATTATAA......  Raphanus sativus var. oleiformis
EY936294       <-- CTAT--CCAAAGAAACAGAATAATGTT--CACTTTATA............  Raphanus sativus cv Early Scarlet Globe
FD959025       <-- CTAT--CCAAAGAAACAGAATAATTTTCTCACTTTATATTATAAAGTTTA  Raphanus raphanistrum subsp. maritimus
EV542568       <-- CTAT--CCAAAGAAACAGAATAATGTTCTCACTTTATATTATAA-GTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD934472       <-- CTAT--CCAAAGAAACAGAATAATGTT--CACTTTATATTATAAAGTTTA  Raphanus sativus var. oleiformis
EY920917       <-- CTAT--CCAAAGAAACAGAATAATGTTCTCACTTTATATTATAA-GTTTA  Raphanus raphanistrum subsp. landra
FD537503       <-- CTAT--CCAAAGAAACAGAATAATGTTCTCACTTTATATTATAA-GTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW719811       <-- CTATatccaaaga.....................................  Raphanus sativus var. oleiformis
FD539651       <-- CTATATCCAAAGAAACAGAATAATGTT.......................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919217       <-- CTAT--CCAAAGAAACAGAATAATGTTCTCACTT................  Raphanus raphanistrum subsp. landra
FD962474       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD544019       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543932       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY949505       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD955135       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW733742       --> CTAT--CCAAgaac....................................  Raphanus sativus cv Rat-Tail Radish #3870
FD536495       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW731480       --> CTAT--CCAAAGAAACAGAATAATGTTC--ACTTTATATTATAAAGTTT-  Raphanus sativus cv Rat-Tail Radish #3870
EY925440       --> ..................................................  Raphanus raphanistrum subsp. landra
EY929818       --> ..................................................  Raphanus sativus var. oleiformis
EY938712       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD937969       --> ..................................................  Raphanus sativus var. oleiformis
EY940548       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW715128       --> ..................................................  Raphanus sativus var. oleiformis
EX887655       --> CTATATCCAAAGAAACAGAATAATGTTC--ACTTTATATTATAAAGTTTA  Raphanus sativus var. oleiformis
FD964288       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV524544       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD552118       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566316       --> ..................................................  Raphanus raphanistrum subsp. landra
EX904034       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD955124       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY428532       --> CTATATCCAAAGAAACAGAATAATGTTC--ACTTTATATTATAAAGTTTA  Raphanus sativus cv GSK3-1
EX765327       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538592       --> CTAT--CCAAAGAAACAGAATAATGTTCTCACTTTATATTATAA-GTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW722932       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD946634       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               901    -    951
UN23425        --> TATAAAAAA-G-ACCAAATACATGTTTAGACATGCATGTGTTTAATTAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529518       <-- ..................................................
FD547946       <-- ..................................................
EW727691       <-- ..................................................
EX891757       <-- ..................................................
EY936294       <-- ..................................................
FD959025       <-- TATAAAAAAAG-ACCAAATACATGTTTAG.....................
EV542568       <-- TATAAAAAA-G-ACCAAATACATGTTTAGACATGCATGTGTTTAATTAAc
FD934472       <-- TATAAAAAA-GGACCAAATACATGTTTAGACATGCATGTGTTTAtt....
EY920917       <-- TATAAAAAA-G-ACCAAATACATGTTTAGACATGCATGTGTTTAATTAAT
FD537503       <-- TATAAAAAA-G-ACCAAATACATGTTT.......................
EW719811       <-- ..................................................
FD539651       <-- ..................................................
EY919217       <-- ..................................................
FD962474       --> ..................................................
FD544019       --> ..................................................
FD543932       --> ..................................................
EY949505       --> ..................................................
FD955135       --> ..................................................
EW733742       --> ..................................................
FD536495       --> ..................................................
EW731480       --> TATATAAAA-G-ACCAAATACATGTTTAGACATGCATGTGTTatat....
EY925440       --> ..................................................
EY929818       --> ..................................................
EY938712       --> ..................................................
FD937969       --> ..................................................
EY940548       --> ..................................................
EW715128       --> ..................................................
EX887655       --> TATA..............................................
FD964288       --> ..................................................
EV524544       --> ..................................................
FD552118       --> ..................................................
EV566316       --> ..................................................
EX904034       --> ..................................................
FD955124       --> ..................................................
FY428532       --> TATAAAAAA-G-ACCAAATACATGTTTAGACATGCATGTGTTTA-TTAAT
EX765327       --> ..................................................
EV538592       --> TATAAAAAA-G-ACCAAATACATGTTTAGACATGCATGTGTTTAATTAAc
EW722932       --> ..................................................
FD946634       --> ..................................................

               951    -   1001
UN23425        --> AATAGTATTTGATGTTCTGTTGTGGTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529518       <-- .............................
FD547946       <-- .............................
EW727691       <-- .............................
EX891757       <-- .............................
EY936294       <-- .............................
FD959025       <-- .............................
EV542568       <-- .............................
FD934472       <-- .............................
EY920917       <-- AATAGTATTTGATGTTCTGTTGTGGTCTT
FD537503       <-- .............................
EW719811       <-- .............................
FD539651       <-- .............................
EY919217       <-- .............................
FD962474       --> .............................
FD544019       --> .............................
FD543932       --> .............................
EY949505       --> .............................
FD955135       --> .............................
EW733742       --> .............................
FD536495       --> .............................
EW731480       --> .............................
EY925440       --> .............................
EY929818       --> .............................
EY938712       --> .............................
FD937969       --> .............................
EY940548       --> .............................
EW715128       --> .............................
EX887655       --> .............................
FD964288       --> .............................
EV524544       --> .............................
FD552118       --> .............................
EV566316       --> .............................
EX904034       --> .............................
FD955124       --> .............................
FY428532       --> AATAG........................
EX765327       --> .............................
EV538592       --> .............................
EW722932       --> .............................
FD946634       --> .............................