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Alignment for radish unigene UN23444

               1      -     51
UN23444        --> GGGCTGCGAGTCGTCCTCTCTCTTCTCTAGGGTTTTTCACATTCGGCGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531316       <-- GGGCTGCGAGTCGTCCTCTCTCTCCTCTAGGGTTTTTCACATTCGGCGTT  Raphanus raphanistrum subsp. maritimus
EX767884       <-- ................................TTTTTCACATTCGGCGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX891989       <-- ................................TTTTTCACATTCGGCGTT  Raphanus sativus var. oleiformis
EY903741       <-- ................................TTTTTCATATTCGGCGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945457       <-- ................................TTTTTCATATTCGGCGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD567719       <-- ................................TTTTTCACATTCGGCGTT  Raphanus sativus var. oleiformis
FD969726       <-- ................................TTTTTCATATTCGGCGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV524869       --> GGGCTGCGAGTCGTCCTCTCTCTTCTCTAGGGTTTTTCACATTCGGCGTT  Raphanus raphanistrum subsp. maritimus
EV526970       --> GGGCTGCGAGTCGTCCTCTCTCTCCTCTAGGGTTTTTCACATTCGGCGTT  Raphanus raphanistrum subsp. maritimus
EX896293       --> GGGCTGCGAGTCGTCCTCTCTCTTCTCTAGGGTTTTTCACATTCGGCGTT  Raphanus sativus cv Early Scarlet Globe
EX887969       --> ................................TTTTTCACATTCGGCGTT  Raphanus sativus var. oleiformis
EX905644       --> ................................TTTTTCATATTCGGCGGT  Raphanus sativus cv Rat-Tail Radish #3870
EY907924       --> ................................TTTTTCATATTCGGCGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY950071       --> ................................TTTTTCATATTCGGCGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD532727       --> ................................TTTTTCACATTCGGCGTT  Raphanus raphanistrum subsp. maritimus
FD548628       --> ................................TTTTTCACATTCGGCGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD549434       --> ................................TTTTTCACATTCGGCGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564168       --> ................................TTTTTCACATTCGGCGTT  Raphanus sativus var. oleiformis
FD965642       --> ................................TTTTTCACATTCGGCGTT  Raphanus raphanistrum subsp. maritimus
FD972974       --> ................................TTTTTCATATTCGGCGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974202       --> ................................TTTTTCATATTCGGCGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763849       --> .....................................CACATTCGGCGGT  Raphanus raphanistrum subsp. raphanistrum (NY)

               51     -    101
UN23444        --> GGTGCTCGTTTCGAAATGGCGAAGAGAACGAAGAAGGTTGGAATCGTCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531316       <-- GGTGCTCGTTTCGAAATGGCGAAGAGAACGAAGAAGGTTGGAATCGTCGG
EX767884       <-- GGTGCTCGTATCGAAATGGCGAAGAGAACGAAGAAGGTTGGAATCGTCGG
EX891989       <-- GGTGCTCGTTTCGAAATGGCGAAGAGAACGAAGAAGGTTGGAATCGTCGG
EY903741       <-- GGTGCTCGTATCGAAATGGCGAAGAGAACGAAGAAGGTTGGAATCGTCGG
EY945457       <-- TGTGCTCGTGTCGAAATGGCGAAGAGAACGAAGAAGGTTGGAATCGTCGG
FD567719       <-- GGTGCTCGTTTCGAAATGGCGAAGAGAACGAAGAAGGTTGGAATCGTCGG
FD969726       <-- GGTGCTCGTTTCGAAATGGCGAAGAGAACGAAGAAGGTTGGAATCGTCGG
EV524869       --> GGTGCTCGTTTCGAAATGGCGAAGAGAACGAAGAAGGTTGGAATCGTCGG
EV526970       --> GGTGCTCGTTTCGAAATGGCGAAGAGAACGAAGAAGGTTGGAATCGTCGG
EX896293       --> GGTGCTCGTTTCGAAATGGCGAAGAGAACGAAGAAGGTTGGAATCGTCGG
EX887969       --> GGTGCTCGTTTCGAAATGGCGAAGAGAACGAAGAAGGTTGGAATCGTCGG
EX905644       --> GGTGCTCGTTTCGAAATGGCGAAGAGAACGAAGAAGGTTGGAATCGTCGG
EY907924       --> GGTGCTCGTATCGAAATGGCGAAGAGAACGAAGAAGGTTGGAATCGTCGG
EY950071       --> TGTGCTCGTGTCGAAATGGCGAAGAGAACGAAGAAGGTTGGAATCGTCGG
FD532727       --> GGTGCTCGTTTCGAAATGGCGAAGAGAACGAAGAAGGTTGGAATCGTCGG
FD548628       --> GGTGCTCGTTTCGAAATGGCGAAGAGAACGAAGAAGGTTGGAATCGTCGG
FD549434       --> GGTGCTCGTATCGAAATGGCGAAGAGAACGAAGAAGGTTGGAATCGTCGG
FD564168       --> GGTGCTCGTTTCGAAATGGCGAAGAGAACGAAGAAGGTTGGAATCGTCGG
FD965642       --> GGTGCTCGTTTCGAAATGGCGAAGAGAACGAAGAAGGTTGGAATCGTCGG
FD972974       --> GGTGCTCGTTTCGAAATGGCGAAGGGAACGAAGAAGGTTGGAATCGTCGG
FD974202       --> GGTGCTCGTTTCGAAATGGCGAAGAGAACGAAGAAGGTTGGAATCGTCGG
EX763849       --> GGTGCTCGTATCGAAATGGCGAAGAGAACGAAGAAGGTTGGAATCGTCGG

               101    -    151
UN23444        --> CAAGTACGGTACTCGATATGGAGCGAGTATCAGGAAGCAGATCAAGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531316       <-- CAAGTACGGTACTCGATATGGAGCGAGTATCAGGAAGCAGATCAAGAAGA
EX767884       <-- CAAGTACGGTACTCGATATGGAGCGAGTATCAGGAAGCAGATCAAGAAGA
EX891989       <-- CAAGTACGGTACTCGATATGGAGCGAGTATCAGGAAGCAGATCAAGAAGA
EY903741       <-- CAAGTACGGTACTCGATATGGAGCGAGTATCAGGAAGCAGATCAAGAAGA
EY945457       <-- CAAGTACGGTACTCGATATGGAGCGAGTATCAGGAAGCAGATCAAGAAAA
FD567719       <-- CAAGTACGGTACTCGATATGGAGCGAGTATCAGGAAGCAGATCAAGAAGA
FD969726       <-- CAAGTACGGTACTCGATATGGAGCGAGTATCAGGAAGCAGATCAAGAAGA
EV524869       --> CAAGTACGGTACTCGATATGGAGCGAGTATCAGGAAGCAGATCAAGAAGA
EV526970       --> CAAGTACGGTACTCGATATGGAGCGAGTATCAGGAAGCAGATCAAGAAGA
EX896293       --> CAAGTACGGTACTCGATATGGAGCGAGTATCAGGAAGCAGATCAAGAAGA
EX887969       --> CAAGTACGGTACTCGATATGGAGCGAGTATCAGGAAGCAGATCAAGAAGA
EX905644       --> CAAGTACGGTACTCGATATGGAGCGAGTATCAGGAAGCAGATTAAGAAGA
EY907924       --> CAAGTACGGTACTCGATATGGAGCGAGTATCAGGAAGCAGATCAAGAAGA
EY950071       --> CAAGTACGGTACTCGATATGGAGCGAGTATCAGGAAGCAGATCAAGAAAA
FD532727       --> CAAGTACGGTACTCGATATGGAGCGAGTATCAGGAAGCAGATCAAGAAGA
FD548628       --> CAAGTACGGTACTCGATATGGAGCGAGTATCAGGAAGCAGATCAAGAAGA
FD549434       --> CAAGTACGGTACTCGATATGGAGCGAGTATCAGGAAGCAGATCAAGAAGA
FD564168       --> CAAGTACGGTACTCGATATGGAGCGAGTATCAGGAAGCAGATCAAGAAGA
FD965642       --> CAAGTACGGTACTCGATATGGAGCGAGTATCAGGAAGCAGATCAAGAAGA
FD972974       --> CAAGTACGGTACTCGATATGGAGCGAGTATCAGGAAGCAGATTAAGAAGA
FD974202       --> CAAGTACGGTACTCGATATGGAGCGAGTATCAGGAAGCAGATCAAGAAGA
EX763849       --> CAAGTACGGTACTCGATATGGAGCGAGTATCAGGAAGCAGATCAAGAAGA

               151    -    201
UN23444        --> TGGAGGTGAGCCAGCACAGCAAGTACTTCTGTGAGTTCTGCGGCAAGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531316       <-- TGGAGGTGAGCCAGCACAGCAAGTACTTCTGTGAGTTTTGCGGCAAGTAC
EX767884       <-- TGGAGGTGAGCCAGCACAGCAAGTACTTCTGTGAGTTCTGCGGCAAGTAC
EX891989       <-- TGGGGGTGAGCCAGCACAGCAAGTACTTCTGTGAGTTCTGCGGCAAGTAC
EY903741       <-- TGGAGGTGAGCCAGCACAGCAAGTACTTCTGTGAGTTCTGCGGCAAGTAC
EY945457       <-- TGGAGGTGAGCCAACACAGCAAGTACTTCTGTGAGTTCTGCGGCAAGTAC
FD567719       <-- TGGGGGTGAGCCAGCACAGCAAGTACTTCTGTGAGTTTTGCGGCAAGTAC
FD969726       <-- TGGAGGTGAGCCAGCACAGCAAGTACTTCTGTGAGTTCTGCGGCAAGTAC
EV524869       --> TGGAGGTGAGCCAGCACAGCAAGTACTTCTGTGAGTTCTGCGGCAAGTAC
EV526970       --> TGGAGGTGAGCCAGCACAGCAAGTACTTCTGTGAGTTCTGCGGCAAGTAC
EX896293       --> TGGAGGTGAGCCAGCACAGCAAGTACTTCTGTGAGTTCTGCGGCAAGTAC
EX887969       --> TGGGGGTGAGCCAGCACAGCAAGTACTTCTGTGAGTTCTGCGGCAAGTAC
EX905644       --> TGGAGGTTAGCCAGCACAGCAAGTACTTCTGTGATTTCTGCGGCAAGTAC
EY907924       --> TGGAGGTGAGCCAGCACAGCAAGTACTTCTGTGAGTTCTGCGGCAAGTAC
EY950071       --> TGGAGGTGAGCCAACACAGCAAGTACTTCTGTGAGTTCTGCGGCAAGTAC
FD532727       --> TGGAGGTGAGCCAGCACAGCAAGTACTTCTGTGAGTTCTGCGGCAAGTAC
FD548628       --> TGGAGGTGAGCCAGCACAGCAAGTACTTCTGTGAGTTCTGCGGCAAGTAC
FD549434       --> TGGAGGTGAGCCAGCACAGCAAGTACTTCTGTGAGTTCTGCGGCAAGTAC
FD564168       --> TGGGGGTGAGCCAGCACAGCAAGTACTTCTGTGAGTTCTGCGGCAAGTAC
FD965642       --> TGGAGGTGAGCCAGCACAGCAAGTACTTCTGTGAGTTCTGCGGCAAGTAC
FD972974       --> TGGAGGTGAGCCAGCACAGCAAGTACTTCTGTGAGTTCTGCGGCAAGTAC
FD974202       --> TGGAGGTGAGCCAGCACAGCAAGTACTTCTGTGAGTTCTGCGGCAAGTAC
EX763849       --> TGGAGGTGAGCCAGCACAGCAAGTACTTCTGTGAGTTCTGCGGCAAGTAC

               201    -    251
UN23444        --> GGAGTGAAGCGAAAGGCTGTTGGTATCTGGGGATGCAAGGATTGTGGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531316       <-- GGAGTGAAGCGAAAGGCTGTTGGTATCTGGGGATGCAAGGATTGTGGCAA
EX767884       <-- GGAGTGAAGCGAAAGGCCGTTGGAATCTGGGGATGCAAGGATTGTGGCAA
EX891989       <-- GGAGTGAAGCGAAAGGCTGTTGGTATCTGGGGATGCAAGGATTGTGGCAA
EY903741       <-- GGAGTGAAGCGAAAGGCAGTTGGTATCTGGGGATGCAAGGATTGTGGCAA
EY945457       <-- GGAGTGAAGCGAAAGGCAGTTGGTATCTGGGGATGCAAGGATTGTGGCAA
FD567719       <-- GGAGTGAAGCGAAAGGCTGTTGGTATCTGGGGATGCAAGGATTGTGGCAA
FD969726       <-- GGAGTGAAGCGAAAGGCTGTTGGAATCTGGGGATGCAAGGATTGTGGCAA
EV524869       --> GGAGTGAAGCGAAAGGCTGTTGGTATCTGGGGATGCAAGGATTGTGGCAA
EV526970       --> GGAGTGAAGCGAAAGGCTGTTGGTATCTGGGGATGCAAGGATTGTGGCAA
EX896293       --> GGAGTGAAGCGAAAGGCTGTTGGTATCTGGGGATGCAAGGATTGTGGCAA
EX887969       --> GGAGTGAAGCGAAAGGCTGTTGGTATCTGGGGATGCAAGGATTGTGGCAA
EX905644       --> GGAGTGAAGCGAAAGGCTGTTGGTATCTGGGGATGCAAGGATTGTGGCAA
EY907924       --> GGAGTGAAGCGAAAGGCAGTTGGTATCTGGGGATGCAAGGATTGTGGCAA
EY950071       --> GGAGTGAAGCGAAAGGCAGTTGGTATCTGGGGATGCAAGGATTGTGGCAA
FD532727       --> GGAGTGAAGCGAAAGGCTGTTGGTATCTGGGGATGCAAGGATTGTGGCAA
FD548628       --> GGAGTGAAGCGAAAGGCTGTTGGTATCTGGGGATGCAAGGATTGTGGCAA
FD549434       --> GGAGTGAAGCGAAAGGCCGTTGGAATCTGGGGATGCAAGGATTGTGGCAA
FD564168       --> GGAGTGAAGCGAAAGGCTGTTGGTATCTGGGGATGCAAGGATTGTGGCAA
FD965642       --> GGAGTGAAGCGAAAGGCTGTTGGTATCTGGGGATGCAAGGATTGTGGCAA
FD972974       --> GGAGTGAAGCGAAAGGCAGTTGGTATCTGGGGATGCAAGGATTGTGGCAA
FD974202       --> GGAGTGAAGCGAAAGGCTGTTGGAATCTGGGGATGCAAGGATTGTGGCAA
EX763849       --> GGAGTGAAGCGAAAGGCCGTTGGAATCTGGGGATGCAAGGATTGTGGCAA

               251    -    301
UN23444        --> GGTCAAGGCTGGTGGTGCCTACACCATGAACACCGCCAGTGCCGTCACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531316       <-- GGTCAAGGCTGGTGGTGCCTACACCATGAACACCGCCAGTGCCGTCACCG  Raphanus raphanistrum subsp. maritimus
EX767884       <-- GGTCAAGGCTGGTGGTGCCTACACCATGAACACCGCCAGTGCCGTCACCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX891989       <-- GGTCAAAGCTGGTGGTGCCTACACCATGAACACCGCCAGTGCCGTCACCG  Raphanus sativus var. oleiformis
EY903741       <-- GGTCAAGGCTGGTGGTGCCTGCACCATGAACACCGCCAGTGCCGTCACCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945457       <-- GGTCAAAGCTGGTGGTGCCTACACCATGAACACCGCCAGTGCCGTCACCG  Raphanus sativus cv Rat-Tail Radish #3870
FD567719       <-- GGTCAAAGCTGGTGGTGCCTACACCATGAACACCGCCAGTGCCGTCACCG  Raphanus sativus var. oleiformis
FD969726       <-- GGTCAAGGCTGGTGGTGCTTACACCATGAACACCGCCAGTGCCGTCACCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV524869       --> GGTCAAGGCTGGTGGTGCCCACACCATGAACACCGCCAGTGCCGTCACCG  Raphanus raphanistrum subsp. maritimus
EV526970       --> GGTCAAGGCTGGTGGTGCCTACACCATGAACACCGCCAGTGCCGTCACCG  Raphanus raphanistrum subsp. maritimus
EX896293       --> GGTCAAGGCTGGTGGTGCCTACACCATGAACACCGCCAGTGCCGTCACCG  Raphanus sativus cv Early Scarlet Globe
EX887969       --> GGTCAAAGCTGGTGGTGCCTACACCATGAACACCGCCAGTGCCGTCACCG  Raphanus sativus var. oleiformis
EX905644       --> GGTCAAGGCTGGTGGTGCCTACACCATGAACACCGCCAGTGCCGTCACCG  Raphanus sativus cv Rat-Tail Radish #3870
EY907924       --> GGTCAAGGCTGGTGGTGCCTGCACCATGAACACCGCCAGTGCCGTCACCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY950071       --> GGTCAAAGCTGGTGGTGCCTACACCATGAACACCGCCAGTGCCGTCACCG  Raphanus sativus cv Rat-Tail Radish #3870
FD532727       --> GGTCAAGGCTGGTGGTGCCTACACCATGAACACCGCCAGTGCCGTCACCG  Raphanus raphanistrum subsp. maritimus
FD548628       --> GGTCAAGGCTGGTGGTGCCTACACCATGAACACCGCCAGTGCCGTCGCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD549434       --> GGTCAAGGCTGGTGGTGCCTACACCATGAACACCGCCAGTGCCGTCACCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564168       --> GGTCAAAGCTGGTGGTGCCTACACCATGAACACCGCCAGTGCCGTCACCG  Raphanus sativus var. oleiformis
FD965642       --> GGTCAAGGCTGGTGGTGCCTACACCATGAACACCGCCAGTGCCGTCACCG  Raphanus raphanistrum subsp. maritimus
FD972974       --> GGTCAAGGCTGGTGGTGCCTACACCATGAACACCGCCAGTGCCGTCACCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974202       --> GGTCAAGGCTGGTGGTGCTTACACCATGAACACCGCCAGTGCCGTCACCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763849       --> GGTCAAGGCTGGTGGTGCCTACACCATGAACACCGCCAGTGCCGTCACCG  Raphanus raphanistrum subsp. raphanistrum (NY)

               301    -    351
UN23444        --> TTAGAAGCACCATCAGGAGGTTGAGGGAGCAGATCGAGGGTTAAAAAAA-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531316       <-- TTAGAAGCACCATCAGGAGGTTGAGGGAGCAGATCGAGGGTTAAAAAAA-
EX767884       <-- TTAGAAGCACCATCAGGAGGTTGAGGGAGCAGATCGAGGGTTAAAAAA--
EX891989       <-- TTAGAAGCACCATCAGGAGGTTGAGGGAGCAGATCGAGGGTTAAAAAAA-
EY903741       <-- TTAGAAGCACCATCAGGAGGTTGAGGGAGCAGATCGAGGGTTAAAAAA--
EY945457       <-- TTAGAAGCACCATCAGGAGGTTGAGGGAGCAGATTGAGGGTTAAAAAAAA
FD567719       <-- TTAGAAGCACCATCAGGAGGTTGAGGGAGCAGATCGAGGGTTAAAAAAA-
FD969726       <-- TTAGAAGCACCATCAGGAGGTTGAGGGAGCAGATCGAGGGTTAAATAAA-
EV524869       --> TTAGAAGCACCATCAGGAGGTTGAGGGAGCAGATCGAGGGTTAAAAAAA-
EV526970       --> TTAGAAGCACCATCAGGAGGTTGAGGGAGCAGATCGAGGGTTAAAAAAA-
EX896293       --> TTAGAAGCACCATCAGGAGGTTGAGGGAGCAGATCGAGGGTTAAAAAAA-
EX887969       --> TTAGAAGCACCATCAGGAGGTTGAGGGAGCAGATCGAGGGTTAAAAAAA-
EX905644       --> TTAGAAGCACCATCAGGAGGTTGAGGGAGCAGATCGAGGGTTAAAAAAA-
EY907924       --> TTAGAAGCACCATCAGGAGGTTGAGGGAGCAGATCGAGGGTTAAAAAA--
EY950071       --> TTAGAAGCACCATCAGGAGGTTGAGGGAGCAGATTGAGGGTTAAAAAAAA
FD532727       --> TTAGAAGCACCATCAGGAGGTTGAGGGAGCAGATCGAGGGTTAAAAAAA-
FD548628       --> TTAGAAGCACCATCAGGAGGTTGAGGGAGCAGATCGAGGGTTAAAAAAA-
FD549434       --> TTAGAAGCACCATCAGGAGGTTGAGGGAGCAGATCGAGGGTTAAAAAA--
FD564168       --> TTAGAAGCACCATCAGGAGGTTGAGGGAGCAGATCGAGGGTTAAAAAAA-
FD965642       --> TTAGAAGCACCATCAGGAGGTTGAGGGAGCAGATCGAGGGTTAAAAAAA-
FD972974       --> TTAGAAGCACCATCAGGAGGTTGAGGGAGCAGATCGAGGGTTAAAAAA--
FD974202       --> TTAGAAGCACCATCAGGAGGTTGAGGGAGCAGATCGAGGGTTAAATAAA-
EX763849       --> TTAGAAGCACCATCAGGAGGTTGAGGGAGCAGATCGAGGGTTAAAAAA--

               351    -    401
UN23444        --> TCTTCATATGATTTGTCGTCATTCAATTGGCTTCTTCGCTTTTTTT----
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531316       <-- TCTTCATATGATTTGTCGTCATTCAATTGGCTTTTTCGCTTTTTTT---T  Raphanus raphanistrum subsp. maritimus
EX767884       <-- TCTTCATATGATTTGTCGTCATTCAATTGGCTTCTTCGCTTTTTTT----  Raphanus raphanistrum subsp. raphanistrum (NY)
EX891989       <-- TCTTCATATGATTTGTCGTCATTCAATTGGCTTCTTCGCTTTTTTT----  Raphanus sativus var. oleiformis
EY903741       <-- TCTTCATATGATTTGTCATCATTCAATTGGCTTCTTCGCTTTTTTT----  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945457       <-- TCTTCATATGATTTGTCGTCATTCAATTGGCTTCTTCGCTTTTTTT----  Raphanus sativus cv Rat-Tail Radish #3870
FD567719       <-- TCTTCATATGATTTGTCGTCATTCAATTGGCTTCTTCGCTTTTTTT----  Raphanus sativus var. oleiformis
FD969726       <-- TCTTCATATGATTTGTCGTCATCCAATTGGCTTCTTCGCTTTTTTT----  Raphanus raphanistrum subsp. raphanistrum (MS)
EV524869       --> TCTTCATATGATTTGTCGTCATTCAATTGGCTTCTTCGCTTTTTTTTTTT  Raphanus raphanistrum subsp. maritimus
EV526970       --> TCTTCATATGATTTGTCGTCATTCAATTGGCTTCTTCGCTTTTTTT---T  Raphanus raphanistrum subsp. maritimus
EX896293       --> TCTTCATATGATTTGTCGTCATTCAATTGGCTTCTTCGCTTTTTTT----  Raphanus sativus cv Early Scarlet Globe
EX887969       --> TCTTCATATGATTTGTCGTCATTCAATTGGCTTCTTCGCTTTTTTT----  Raphanus sativus var. oleiformis
EX905644       --> TCTTCATATGATTTGTCGTCATTCAATTGGCTTCTTCGCTTTTTTT----  Raphanus sativus cv Rat-Tail Radish #3870
EY907924       --> TCTTCATATGATTTGTCATCATTCAATTGGCTTCTTCGCTTTTTTT----  Raphanus raphanistrum subsp. raphanistrum (MS)
EY950071       --> TCTTCATATGATTTGTCGTCATTCAATTGGCTTCTTCGCTTTTTTT----  Raphanus sativus cv Rat-Tail Radish #3870
FD532727       --> TCTTCATATGATTTGTCGTCATTCAATTGGCTTCTTCGCTTTTTTT-TTT  Raphanus raphanistrum subsp. maritimus
FD548628       --> TCTTCATATGATTTGTCGTCATTCAATTGGCTTCTTCGCTTTTTTT--TT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD549434       --> TCTTCATATGATTTGTCGTCATTCAATTGGCTTCTTCGCTTTTTTT----  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564168       --> TCTTCATATGATTTGTCGTCATTCAATTGGCTTCTTCGCTTTTTTT----  Raphanus sativus var. oleiformis
FD965642       --> TCTTCATATGATTTGTCGTCATTCAATTGGCTTCTTCGCTTTTTTT--TT  Raphanus raphanistrum subsp. maritimus
FD972974       --> TCTTCATATGATTTGTCGTCATTCAATTGGCTTCTTCGCTTTTTTT----  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974202       --> TCTTCATATGATTTGTCGTCATCCAATTGGCTTCTTCGCTTTTTTT----  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763849       --> TCTTCATATGATTTGTCGTCATTCAATTGGCTTCTTCGCTTTTTTT----  Raphanus raphanistrum subsp. raphanistrum (NY)

               401    -    451
UN23444        --> -GACAATC--GTGCTATGCTTATCTTTCTT-ATTCAAGACGCTGTTACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531316       <-- TGACAATC--GTGCTATGCTTATCTTTCTT-ATTCAAGACGCTGTTACAT  Raphanus raphanistrum subsp. maritimus
EX767884       <-- -GACAATCATATGCTATGCTTATCTTTCTT-ATTCAAGACGCTGTTACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX891989       <-- -GACAATC--GTGCTATGCTTATCTTTCTT-ATTCAAGACGCTGTTACAT  Raphanus sativus var. oleiformis
EY903741       <-- TGACAATC--ATGCTATGCCTATCTTTGTT-ATTCAAGACGCTGTTACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY945457       <-- -GACAATC--GTGCTATGCTTATCTTTCTT-ATTCAAGACGCTGTTACAT  Raphanus sativus cv Rat-Tail Radish #3870
FD567719       <-- -GACAATC--GTGCTATGCTTATCTTTCTT-ATTCAAGACGCTGTTACAT  Raphanus sativus var. oleiformis
FD969726       <-- -GACAATCATATGCTATGCTTATCTTTCTT-ATTCAAGACGCTGTTACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV524869       --> TGACAATC--GTGCTATGCTTATCTTTCTT-ATTCAAGACGCTGTTACAT  Raphanus raphanistrum subsp. maritimus
EV526970       --> TGACAATC--GTGCTATGCTTATCTTTCTT-ATTCAAGACGCTGTTACAT  Raphanus raphanistrum subsp. maritimus
EX896293       --> -GACAATC--GTGCTATGCTTATCTTTCTT-ATTCAAGACGCTGTTACAT  Raphanus sativus cv Early Scarlet Globe
EX887969       --> -GACAATC--GTGCTATGCTTATCTTTCTT-ATTCAAGACGCTGTTACAT  Raphanus sativus var. oleiformis
EX905644       --> -GACAATC--GTGCTATGCTTATCTTTCTT-ATTCAAGACGCTGTTACAT  Raphanus sativus cv Rat-Tail Radish #3870
EY907924       --> TGACAATC--ATGCTATGCCTATCTTTGTT-ATTCAAGACGCTGTTACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY950071       --> -GACAATC--GTGCTATGCTTATCTTTCTTTATTCAAGACGCTGTTACAT  Raphanus sativus cv Rat-Tail Radish #3870
FD532727       --> TGACAATC--GTGCTATGCTTATCTTTCTT-ATTCAAGACGCTGTTACAT  Raphanus raphanistrum subsp. maritimus
FD548628       --> TGACAATC--TTGCTATGCTTATCTTTCTT-ATTCAAGACGCTGTTACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD549434       --> -GACAATCATATGCTATGCTTATCTTTCTT-ATTCAAGACGCTGTTACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564168       --> -GACAATC--GTGCTATGCTTATCTTTCTT-ATTCAAGACGCTGTTACAT  Raphanus sativus var. oleiformis
FD965642       --> TGACAATC--GTGCTATGCTTATCTTTCTT-ATTCAAGACGCTGTTACAT  Raphanus raphanistrum subsp. maritimus
FD972974       --> TGACAATC--ATGCTATGCCTATCTTTGTT-ATTCAAGACGCTGTTACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974202       --> -GACAATCATATGCTATGCTTATCTTTCTT-ATTCAAGACGCTGTTACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763849       --> -GACAATCATATGCTATGCTTATCTTTCTT-ATTCAAGACGCTGTTACAT  Raphanus raphanistrum subsp. raphanistrum (NY)

               451    -    501
UN23444        --> TTAGCCATGAATCTATGTTTTATTGGATTTTTTGGAGTTCCTTAATGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531316       <-- TTAGCCATGAATCTATGTTTTATTGGAgttccttaact............
EX767884       <-- TTAGCCATGAATCTATGTTTTGTTGGATTTTTTGGAGTTCCTTAATGAGT
EX891989       <-- TTAGCCATGAATCTATGTTTTATTGGAgtt....................
EY903741       <-- TTAGCCATGAATCGATGTTTTATTGGATTTTTTGGAGTTCCTTAATGAGT
EY945457       <-- TTAGCCATGAATCTATGTTTTATTGGAgct....................
FD567719       <-- TTAGCCATGAATCTATGTTTTATTGGAgtt....................
FD969726       <-- TTAGCCATGAATCTATGTTTTGTTGGATTTTTTGGAGTTCCTT.......
EV524869       --> TTAGCCATGAATCTATGTTTTATTGGAgttccttaattagttatcgttt.
EV526970       --> TTAGCCATGAATCTATGTTTTATTGGAgttccttaact............
EX896293       --> TTAGCCATGAATCTATGTTTTATTGGAgttccttaatt............
EX887969       --> TTAGCCATGAATCTATGTTTTATTGGAgtt....................
EX905644       --> TTAGCCATGAATCTATGTTTTATTGGAGTTTTTGGAGTT...........
EY907924       --> TTAGCCATGAATCGATGTTTTATTGGATTTTTTGGAGTTCCTTAATGAGT
EY950071       --> TTAGCCATGAATCTATGTTTTATTGGAgcta...................
FD532727       --> TTAGCCATGAATCTATGTTTTATTGGAgttcctt................
FD548628       --> TTAGCCATGAATCTATGTTTTATTGGAgttcc..................
FD549434       --> TTAGCCATGAATCTATGTTTTGTTGGATTT....................
FD564168       --> TTAGCCATGAATCTATGTTTTATTGGAgtt....................
FD965642       --> TTAGCCATGAATCTATGTTTTATTGGAgttcct.................
FD972974       --> TTAGCCATGAATCGATGTTTTATTGG........................
FD974202       --> TTAGCCATGAATCTATGTTTTGTTGGATTTTTTGGAGTTCCTT.......
EX763849       --> TTAGCCATGAATCTATGTTTTGTTGGATTTTTTGGAGTTCCTTAATGAGT

               501    -    551
UN23444        --> TATCGTTTACATATC
                   ~~~~~~~~~~~~~~~
EV531316       <-- ...............
EX767884       <-- TATCGTTTAC.....
EX891989       <-- ...............
EY903741       <-- TATCGTTTACATATC
EY945457       <-- ...............
FD567719       <-- ...............
FD969726       <-- ...............
EV524869       --> ...............
EV526970       --> ...............
EX896293       --> ...............
EX887969       --> ...............
EX905644       --> ...............
EY907924       --> TATCGTTTACATATC
EY950071       --> ...............
FD532727       --> ...............
FD548628       --> ...............
FD549434       --> ...............
FD564168       --> ...............
FD965642       --> ...............
FD972974       --> ...............
FD974202       --> ...............
EX763849       --> TATCGTTTAC.....