RadishBase

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Alignment for radish unigene UN23476

               1      -     51
UN23476        --> GTTTTATTGCAATATAGTTTTCATTCTCTGAATAGTCTTGTCTTGTGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD946628       <-- ..................................................
FD973391       <-- ..................................................
FD955652       <-- ..................................................
EW716576       <-- ..................................................
FD551439       <-- ..................................................
FD533381       <-- ..................................................
FD551761       <-- ..................................................
EY897171       <-- ..................................................
EX750169       <-- ..................................................
EW717565       <-- ..................................................
FD568548       <-- ..................................................
EW721463       --> GTTTTATTGCAATATAGTTTTCATTCTCTGAATAGTCTTGTCTTGTGTTT
EW721968       --> ........GCAATATAGTTTTCATTCTCTGAATAGTCTTGTCTTGTGTTT
FD539419       --> ........GCAATATAGTTTTCATTCTCTGAATAGTCT---C--GTGTTT
EX760988       --> ............TATAGTTTTCATTCTCTGAATAGTCTTGTCTTGTGTTT
FD547605       --> ..............................ctctgaataGTCTTGTTTTT
EY893558       --> ..................................................
FD529578       --> ..................................................
FD975563       --> ..................................................
FD969098       --> ..................................................
FD572875       --> ..................................................
FD942721       --> ..................................................
FD951693       --> ..................................................

               51     -    101
UN23476        --> ATTGCTCTGGCGAGACACACTTATTGTTAACAA-CATTTGAAGAA-GATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD946628       <-- ............................................A-GATT
FD973391       <-- ............................................A-GATT
FD955652       <-- ..................................................
EW716576       <-- ..................................................
FD551439       <-- ..................................................
FD533381       <-- ..................................................
FD551761       <-- ..................................................
EY897171       <-- ..................................................
EX750169       <-- ..................................................
EW717565       <-- ..................................................
FD568548       <-- ..................................................
EW721463       --> ATTGCTCTGGCGAGACACACTTATTGTTAACAA-CATTTGAAGAA-GATT
EW721968       --> ATTGCTCTGGCGAGACACACTTATTGTTAACAA-CATTTGAAGAA-GATT
FD539419       --> ATTGCTCTGGCGAGACACACTTATTGTTAACAAACATTTGAAGAA-GATT
EX760988       --> ATTGCTCTGGCGCGCCACACTTATTGTTAACAA-CATTTGAAGAA-GATT
FD547605       --> ATTGCTCTGGCGCGCCACACTTGTTGTTAACAA-CATTTGAAGAAAGATT
EY893558       --> ..........................................GAA-AATT
FD529578       --> ..........................................GAA-GATT
FD975563       --> ..........................................GAA-GATT
FD969098       --> ............................................A-GATT
FD572875       --> .............................................aaATT
FD942721       --> .............................................aaATT
FD951693       --> ..................................................

               101    -    151
UN23476        --> TGATTATGTTTTTTTACATTGTACTAGAAGGAAGTAA---AGAGAGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD946628       <-- TGATTATGTTTTTT-ACATTGTACTAGAAGGAAGTAA----GAGAGAAAA  Raphanus sativus cv Early Scarlet Globe
FD973391       <-- TGATTATGTTTT-GTACATTGTACTAGAAGGAAGTAA---AGAGAGAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955652       <-- ........TTTTTTTACAT-GTACTAGAAGGAAGTAA----GAGAGAAAA  Raphanus sativus cv Rat-Tail Radish #3870
EW716576       <-- ..................................................  Raphanus sativus var. oleiformis
FD551439       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD533381       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD551761       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897171       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX750169       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW717565       <-- ..................................................  Raphanus sativus var. oleiformis
FD568548       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW721463       --> TGATTATGTTTTTTTACATTGTGCTAGAAGGAAGTAA----GAGAGAAAA  Raphanus sativus var. oleiformis
EW721968       --> TGATTATGTTTTTTTACATTGTACTAGAAGGAAGTAA----GAGAGAAAA  Raphanus sativus var. oleiformis
FD539419       --> TGATTATGTTTTGT-ACATTGTACTAGAAGGAAGTAA---AGAGAGAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760988       --> TGATTATGTTTT-GTACATTGTACTAAAAGGAAGTAA---AGAGAGAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547605       --> TGATTATGTTTTTTTACATTGTACTAGAAGGAAGGAAGTAAGAGAGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893558       --> TGATTATGTTTTTTTACATTGTACTAGAAGGAAGTAA---AGAGAGAAGA  Raphanus raphanistrum subsp. maritimus
FD529578       --> TGATTATGTTTTTTTACATTGTACTAGAAGGAAGTAA---AGAGAGAAGA  Raphanus raphanistrum subsp. maritimus
FD975563       --> TGATTATGTTTTTTTACATTGTACTAGAAGGAAGTAA---AGAGAGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969098       --> TGATTATGTTTT-GTACATTGTACTAGAAGGAAGTAA---AGAGAGAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD572875       --> TGATTATGTTTTTTTACATTGTACTAGAAGGAAGTAA---AGAGAGAAGA  Raphanus sativus cv Early Scarlet Globe
FD942721       --> TGATTATGTTTTTTTACATTGTACTAGAAGGAAGTAA----GAGAGAAAA  Raphanus sativus cv Early Scarlet Globe
FD951693       --> ........TTTTTTTACATTGTACTAGAAGGAAGTAA----GAGAGAAAA  Raphanus sativus cv Rat-Tail Radish #3870

               151    -    201
UN23476        --> TGATGGATCCCTT-GACTTGAGTGAT-A-AGGCCAAACATCTAAAACCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD946628       <-- TGATGGATCCCTT-GACTTGAGTGAT-A-TGGCCAAACATCTAAAACCTT  Raphanus sativus cv Early Scarlet Globe
FD973391       <-- TGATGGATCCCTTTGACTTGAGTGAT-G-AGGCCAA-CATCTAAAACCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955652       <-- TGATGGATCCCTT-GACTTGAGTGAT-A-AGGCCAAACATCTAAAAC-TT  Raphanus sativus cv Rat-Tail Radish #3870
EW716576       <-- ..................................................  Raphanus sativus var. oleiformis
FD551439       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD533381       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD551761       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897171       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX750169       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW717565       <-- ..................................................  Raphanus sativus var. oleiformis
FD568548       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW721463       --> TGATGGATCCCTT-GACTTGAGTGAT-A-AGGCCAAACATCTAAAACCTT  Raphanus sativus var. oleiformis
EW721968       --> TGATGGATCCCTT-GACTTGAGTGAT-A-AGGCCAAACATCTAAAACCTT  Raphanus sativus var. oleiformis
FD539419       --> TGATGGATCCCTTTGACTTGAGTGAT-G-AGGCCAA-CATCTAAAACCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760988       --> TGATGGATCCCTTTGACTTGAGTGAT-G-AGGCCAA-CATCTAAAACCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547605       --> TGATGGATCCCTT-GACTTGAGTGAT-G-AGGCCAAACATCTAAA-CCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893558       --> TGATGGATCCCTT-GACTTGAGTGATGAGAGGCC-AACATCTAAAACCTT  Raphanus raphanistrum subsp. maritimus
FD529578       --> TGATGGATCCCTT-GACTTGAGTGATGAGAGGCC-AACATCTAAAACCTT  Raphanus raphanistrum subsp. maritimus
FD975563       --> TGATGGATCCCTT-GACTTGAGTGATGAGAGGCC-AACATCTAAAACCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969098       --> TGATGGATCCCTTTGACTTGAGTGAT-G-AGGCCAA-CATCTAAAACCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD572875       --> TGATGGATCCCTT-GACTTGAGTGAT-G-AGACCAAACATCTAAAACCTT  Raphanus sativus cv Early Scarlet Globe
FD942721       --> TGATGGATCCCTT-GACTTGAGTGAT-A-TGGCCAAACATCTAAAACCTT  Raphanus sativus cv Early Scarlet Globe
FD951693       --> TGATGGATCCCTT-GACTTGAGTGAT-A-AGGCCAAACATCTAAAACCTT  Raphanus sativus cv Rat-Tail Radish #3870

               201    -    251
UN23476        --> TTTACTCTCGTCAACCCATCACCTTTGGTCTCCAACCAGCAATCACATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD946628       <-- TTTACTCTCGTCAACCCATCACCTTTGGTCTCCAACCAGCAATCACATCC  Raphanus sativus cv Early Scarlet Globe
FD973391       <-- TT-ACTCTCGTCAACCCATCACCTTTGGTCTCCAACCAGCAATCACATCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955652       <-- TTTACTCTCGTCAACCCATCAC-TTTGGTCTCCAACCAGCAATCACATCC  Raphanus sativus cv Rat-Tail Radish #3870
EW716576       <-- ..................................ACCAGCAATCACA-CC  Raphanus sativus var. oleiformis
FD551439       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD533381       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD551761       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897171       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX750169       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW717565       <-- ..................................................  Raphanus sativus var. oleiformis
FD568548       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW721463       --> TTTACTCTCGTCAACCCATCACCTTTGGTCTCCAACCAGCAATCACATCC  Raphanus sativus var. oleiformis
EW721968       --> TTTACTCTCGTCAACCCATCACCTTTGGTCTCCAACCAGCAATCACATCC  Raphanus sativus var. oleiformis
FD539419       --> TT-ATTCTCTTCAACCCATCACCTTTGGTCTCCAACCAGCAATCACATCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760988       --> TT-ACTCTCGTCAACCCATCACCTTTGGTCTCCAACCAGCAATCACATCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547605       --> TTTACTCTCTTCAACCCATCACCTTTGGTCTCCAACCAGCAATCACATCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893558       --> TT-ACTCTCTTCAACCCATCACCTTTGGTCTCCAACCAGCAATCACATCC  Raphanus raphanistrum subsp. maritimus
FD529578       --> TT-ACTCTCTTCAACCCATCACCTTTGGTCTCCAACCAGCAATCACATCC  Raphanus raphanistrum subsp. maritimus
FD975563       --> TT-ACTCTCTTCAACCCATCACCTTTGGTCTCCAACCAGCAATCACATCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969098       --> TT-ACTCTCGTCAACCCATCACCTTTGGTCTCCAACCAGCAATCACATCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD572875       --> TTTACTCTCGTCAACCTACCACCTTTGGTCTCCAACCAGCAATCACATCC  Raphanus sativus cv Early Scarlet Globe
FD942721       --> TTTACTCTCGTCAACCCATCACCTTTGGTCTCCAACCAGCAATCACATCC  Raphanus sativus cv Early Scarlet Globe
FD951693       --> TTTACTCTCGTCAACCCATCACCTTTGGTCTCCAACCAGCAATCACATCC  Raphanus sativus cv Rat-Tail Radish #3870

               251    -    301
UN23476        --> TCTGTTTGCGCCTCTGTATTCTTGAATGATTCCCTCGAGAACACATTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD946628       <-- TCTGTTTGCGCCTCTGTATTCTTGAATGATTCCCTCGAGAACACATTCTC
FD973391       <-- TCTGTTTGCGCCTCTGTATTCTTGAATGATTCCCTCGAGAACACATTCTC
FD955652       <-- TCTGTTTGCGCCTCTGTATTCTTGAATGATTCCCTCGAGAACACATTCTC
EW716576       <-- TCTGTT-GCG-CTCTGTAT-C-TGAATGAT-CCCTCGAGAACACAT-CTC
FD551439       <-- ......................................GAACACATTCTC
FD533381       <-- .................................................C
FD551761       <-- ..................................................
EY897171       <-- ..................................................
EX750169       <-- ..................................................
EW717565       <-- ..................................................
FD568548       <-- ..................................................
EW721463       --> TCTGTTTGCGCCTCTGTATTCTTGAATGATTCCCTCGAGAACACATTCTC
EW721968       --> TCTGTTTGCGCCTCTGTATTCTTGAATGATTCCCTCGAGAACACATTCTC
FD539419       --> TCTGTTTGCGCCTCTGTGTTCTTGAATGATTCCCTCGAGAACACATTCTC
EX760988       --> TCTGTTTGCGCCTCTGTATTCTTGAATGATTCCCTCGAGAACACATTCTC
FD547605       --> TCTGTTTGCGCCTCTGTATTCTTGAATGATTCCCTCGAGAACACATTCTC
EY893558       --> TCTGTTTGCGCCTCTGTATTCTTGAATGATTCCCTCGAGAACACATTCTC
FD529578       --> TCTGTTTGCGCCTCTGTATTCTTGAATGATTCCCTCGAGAACACATTCTC
FD975563       --> TCTGTTTGCGCCTCTGTATTCTTGAATGATTCCCTCGAGAACACATTCTC
FD969098       --> TCTGTTTGCGCCTCTGTATTCTTGAATGATTCCCTCGAGAACACATTCTC
FD572875       --> TCTGTTTGCGCCTCTGTATTCTTGAATGATTCCCTCGAGAACACATTCTC
FD942721       --> TCTGTTTGCGCCTCTGTATTCTTGAATGATTCCCTCGAGAACACATTCTC
FD951693       --> TCTGTTTGCGCCTCTGTATTCTTGAATGATTCCCTCGAGAACACATTCTC

               301    -    351
UN23476        --> CATGTAGGATTTAAGGAAAGGAAGTGAATCTGGAACAGACCAGTTCTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD946628       <-- CATGTAGGATTTAAGGAAAGGAAGTGAATCTGGAACAGACCAGTTCTTGA
FD973391       <-- CATGTAGGATTTAAGGAAAGGAAGTGAATCTGGAACAGACCAGTTCTTGA
FD955652       <-- CATGTAGGATTTAAGGAAAGGAAGTGAATCTGGAACAGACCAGTTCTTGA
EW716576       <-- CATGTAGGATT-AAGGAAAGGAAGTGAATCTGGAACAGACCAGTTCTTGA
FD551439       <-- CATGTAGGATTTAAGGAAAGGAAGTGAATCTGGAACAGACCAGTTCTTGA
FD533381       <-- CATGTAGGATTTAAGGAAAGGAAGTGAATCTAGAACAGACCAGTTCTTGA
FD551761       <-- ..............GGAAAGGAAGTGAATCTGGAACAGACCAGTTCTTGA
EY897171       <-- ...........................ATCTGGAACAGACCAGTTCTTGA
EX750169       <-- ..................................................
EW717565       <-- ..................................................
FD568548       <-- ..................................................
EW721463       --> CATGTAGGATTTAAGGAAAGGAAGTGAATCTGGAACAGACCAGTTCTTGA
EW721968       --> CATGTAGGATTTAAGGAAAGGAAGTGAATCTGGAACAGACCAGTTCTTGA
FD539419       --> CATGTAGGATTTAAGGAAAGGAAGTGAATCTGGAACAGACCAGTTCTTGA
EX760988       --> CATGTAGGATTTAAGGAAAGGAAGTGAATCTGGAACAGACCAGTTCTTGA
FD547605       --> CATGTAGGATTTAAGGAAAGGAAGTGAATCTGGAACAGACCAGTTCTTGA
EY893558       --> CATGTAGGATTTAAGGAAAGGAAGTGAATCTGGAACAGACCAGTTCTTGA
FD529578       --> CATGTAGGATTTAAGGAAAGGAAGTGAATCTAGAACAGACCAGTTCTTGA
FD975563       --> CATGTAGGATTTAAGGAAAGGAAGTGAATCTGGAACAGACCAGTTCTTGA
FD969098       --> CATGTAGGATTTAAGGAAAGGAAGTGAATCTGGAACAGACCAGTTCTTGA
FD572875       --> CATGTAGGATTTAAGGAAAGGAAGTGAATCTGGAACAGACCAGTTCTTGA
FD942721       --> CATGTAGGATTTAAGGAAAGGAAGTGAATCTGGAACAGACCAGTTCTTGA
FD951693       --> CATGTAGGATTTAAGGAAAGGAAGTGAATCTGGAACAGACCAGTTCTTGA

               351    -    401
UN23476        --> AATGTCCCAGTGCAATCTTCATGTGGTATAACTTTGGTGCCAAGGACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD946628       <-- AATGTCCCAGTGCAATCTTCATGTGGTATAACTTTGGTGTCAAGGACAAA  Raphanus sativus cv Early Scarlet Globe
FD973391       <-- AATGTCCCAGTGCAATCTTCATGTGGTATAATTTTGGTGCCAAGGACAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955652       <-- AATGTCCCAGTGCAATCTTCATGTGGTATAACTTTGGTGTCAAGGACAAA  Raphanus sativus cv Rat-Tail Radish #3870
EW716576       <-- AATGTCCCAGTGCAATCTTCATGTGGTATAACTTTGGTGTCAAGGACAAA  Raphanus sativus var. oleiformis
FD551439       <-- AATGTCCCAGTGCAATCTTCATGTGGTATAACTTTGGTGCCAAGGACAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD533381       <-- AATGTCCCAGTGCAATCTTCATGTGGTATAACTTTGGTGCCAAGGACAAA  Raphanus raphanistrum subsp. maritimus
FD551761       <-- AATGTCCCAGTGCAATCTTCATGTGGTATAACTTTGGTGCCAAGGACAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897171       <-- AATGTCCCAGTGCAATCTTCATGTGGTATAACTTTGGTGCCAAGGACAAA  Raphanus raphanistrum subsp. maritimus
EX750169       <-- ...............................................AAA  Raphanus raphanistrum subsp. maritimus
EW717565       <-- ..................................................  Raphanus sativus var. oleiformis
FD568548       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW721463       --> AATGTCCCAGTGCAATCTTCATGTGGTATAACTTTGGTGTCAAGGACAAA  Raphanus sativus var. oleiformis
EW721968       --> AATGTCCCAGTGCAATCTTCATGTGGTATAACTTTGGTGTCAAGGACAAA  Raphanus sativus var. oleiformis
FD539419       --> AATGTCCCAGTGCAATCTTCATGTGGTATAATTTTGGTGCCAAGGACAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760988       --> AATGTCCCAGTGCAATCTTCATGTGGTATAATTTTGGTGCCAAGGACAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547605       --> AATGTCCCAGTGCAATCTTCATGTGGTATAACTTTGGTGCCAAGGACAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893558       --> AATGTCCCAGTGCAATCTTCATGTGGTATAACTTTGGTGCCAAGGACAAA  Raphanus raphanistrum subsp. maritimus
FD529578       --> AATGTCCCAGTGCAATCTTCATGTGGTATAACTTTGGTGCCAAGGACAAA  Raphanus raphanistrum subsp. maritimus
FD975563       --> AATGTCCCAGTGCAATCTTCATGTGGCATAACTTTGGTGCCAAGGACAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969098       --> AATGTCCCAGTGCAATCTTCATGTGGTATAATTTTGGTGCCAAGGACAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD572875       --> AATGTCCCAGTGCAATCTTCATGTGGTATAACTTTGGTGCCAATGACAAA  Raphanus sativus cv Early Scarlet Globe
FD942721       --> AATGTCCCAGTGCAATCTTCATGTGGTATAACTTTGGTGTCAAGGACAAA  Raphanus sativus cv Early Scarlet Globe
FD951693       --> AATGTCCCAGTGCAATCTTCATGTGGTATAACTTTGGTGTCAAGGACAAA  Raphanus sativus cv Rat-Tail Radish #3870

               401    -    451
UN23476        --> TCAGCTGCTGAGATCTTCTCTCCGTTTATGTAAGGTCCATTTTCTTTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD946628       <-- TCAGCTGCTGAGATTTTCTCTCCGTTTATGTAAGGTCCATTTTCTTTGAG  Raphanus sativus cv Early Scarlet Globe
FD973391       <-- TCAGCTGCTGAGATCTTCTCTCCGTTTATGTAAGGTCCATTTTCTTTGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955652       <-- TCAGCTGCTGAGATTTTCTCTCCGTTTATGTAAGGTCCATTTTCTTTGAG  Raphanus sativus cv Rat-Tail Radish #3870
EW716576       <-- TCAGCTGCTGAGATTTTCTCTCCGTTTATGTAAGGTCCATTTTCTTTGAG  Raphanus sativus var. oleiformis
FD551439       <-- TCAGCTGCTGAGATCTTCTCTCCGTTTATGTAAGGTCCATTTTCTTTGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD533381       <-- TCAGCTGCTGAGATCTTCTCTCCGTTTATGTAAGGTCCATTTTCTTTGAG  Raphanus raphanistrum subsp. maritimus
FD551761       <-- TCAGCTGCTGAGATCTTCTCTCCGTTTATGTAAGGTCCATTTTCTTTGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897171       <-- TCAGCTGCTGAGATCTTCTCTCCGTTTATGTAAGGTCCATTTTCTTTGAG  Raphanus raphanistrum subsp. maritimus
EX750169       <-- TCAGCTGCTGAGATCTTCTCTCCGTTTATGTAAGGTCCATTTTCTTTGAG  Raphanus raphanistrum subsp. maritimus
EW717565       <-- .........................TTATGTAAGGTCCATTTTCTTTGAG  Raphanus sativus var. oleiformis
FD568548       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW721463       --> TCAGCTGCTGAGATTTTCTCTCCGTTTATGTAAGGTCCATTTTCTTTGAG  Raphanus sativus var. oleiformis
EW721968       --> TCAGCTGCTGAGATTTTCTCTCCGTTTATGTAAGGTCCATTTTCTTTGAG  Raphanus sativus var. oleiformis
FD539419       --> TCAGCTGCTGAGATCTTCTCTCCGTTTATGTAAGGTCCATTTTCTTTGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760988       --> TCAGCTGCTGAGATCTTCTCTCCGTTTATGTAAGGTCCATTTTCTTTGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547605       --> TCAGCTGCTGAGATCTTCTCTCCGTTTATGTAAGGTCCATTTTCTTTGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893558       --> TCAGCTGCTGAAATCTTCTCTCCGTTTATGTAAGGTCCATTTTCTTTGAA  Raphanus raphanistrum subsp. maritimus
FD529578       --> TCAGCTGCTGAGATCTTCTCTCCGTTTATGTAAGGTCCATTTTCTTTGAG  Raphanus raphanistrum subsp. maritimus
FD975563       --> TCAGCTGCTGAGATCTTCTCTCCGTTTATGTAAGGTCCATTTTCTTTGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969098       --> TCAGCTGCTGAGATCTTCTCTCCGTTTATGTAAGGTCCATTTTCTTTGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD572875       --> TCAGCTGCTGAGATCTTCTCTCCGTTTATGTAAGGTCCATTTTCTTTGAA  Raphanus sativus cv Early Scarlet Globe
FD942721       --> TCAGCTGCTGAGATTTTCTCTCCGTTTATGTAAGGTCCATTTTCTTTGAA  Raphanus sativus cv Early Scarlet Globe
FD951693       --> TCAGCTGCTGAGATTTTCTCTCCGTTTATGTAAGGTCCATTTTCTTTGAG  Raphanus sativus cv Rat-Tail Radish #3870

               451    -    501
UN23476        --> ATAATCGTTGAATGTACTAAGCTCATCTAGTAACACTTGCTCAGTTCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD946628       <-- ATAATTGTTGAATGTACTAAGCTCATCTAGTAACACTTGCTCAGTTCCAT  Raphanus sativus cv Early Scarlet Globe
FD973391       <-- ATAATCGTTGAATGTACTAAGCTCATCTAGTAACACTTGCTCGGTTCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955652       <-- ATAATCGTTGAATGTACTAAGCTCGTCTAGTAACACTTGCTCAGTTCCAT  Raphanus sativus cv Rat-Tail Radish #3870
EW716576       <-- ATAGTTGTTGAATGTACTAAGCTCATCTAGTAACACTTGCTCAGTTCCAT  Raphanus sativus var. oleiformis
FD551439       <-- ATAATCGTTGAATGTACTAAGCTCATCTAGTAACACTTGCTCAGTTCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD533381       <-- ATAATCGTTGAATGTACTAAGCTCATCTAGTAACACTTGCTCAGTTCCAT  Raphanus raphanistrum subsp. maritimus
FD551761       <-- ATAATCGTTGAATGTACTAAGCTCATCTAGTAACACTTGCTCAGTTCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897171       <-- ATAATCGTTGAATGTACTAAGCTCATCTAGTAACACTTGCTCAGTTCCAT  Raphanus raphanistrum subsp. maritimus
EX750169       <-- ATAATCGTTGAATGTACTAAGCTCATCTAGTAACACTTGCTCAGTTCCAT  Raphanus raphanistrum subsp. maritimus
EW717565       <-- ATAATTGTTGAATGTACTAAGCTCATCTAGTAACACTTGCTCAGTTCCAT  Raphanus sativus var. oleiformis
FD568548       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW721463       --> ATAATTGTTGAATGTACTAAGCTCATCTAGTAACACTTGCTCAGTTCCAT  Raphanus sativus var. oleiformis
EW721968       --> ATAGTTGTTGAATGTACTAAGCTCATCTAGTAACACTTGCTCAGTTCCAT  Raphanus sativus var. oleiformis
FD539419       --> ATAATCGTTGAATGTACTAAGCTCATCTAGTAACACTTGCTCAGTTCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760988       --> ATAATCGTTGAATGTACTAAGCTCATCTAGTAACACTTGCTCGGTTCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547605       --> ATAATCGTTGAATGTACTAAGCTCATCTAGTAACACTTGCTCAGTTCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893558       --> ATAATCGTTGAATGTACTAAGCTCATCTAGTAACACTTGCTCAGTTCCAT  Raphanus raphanistrum subsp. maritimus
FD529578       --> ATAATCGTTGAATGTACTAAGCTCATCTAGTAACACTTGCTCAGTTCCAT  Raphanus raphanistrum subsp. maritimus
FD975563       --> ATAATCGTTGAATGTACTAAGCTCATCTAGTAACACTTGCTCAGTTCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969098       --> ATAATCGTTGAATGTACTAAGCTCATCTAGTAACACTTGCTCGGTTCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD572875       --> ATAATCGTTGAATGTACTAAGCTCATCTAGTAACACTTGCTCAGTTCCAT  Raphanus sativus cv Early Scarlet Globe
FD942721       --> ATAATTGTTGAATGTACTAAGCTCATCTAGTAACACTTGCTCAGTTCCAT  Raphanus sativus cv Early Scarlet Globe
FD951693       --> ATAATCGTTGAATGTACTAAGCTCGTCTAGTAACACTTGCTCAGTTCCAT  Raphanus sativus cv Rat-Tail Radish #3870

               501    -    551
UN23476        --> CTCCTGAATCTTTGCTCTTGAGAAAACCGATAAACGTGGAGAAGATCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD946628       <-- CTCCTGAATCTTTGCTCTTGAGAAAACCGATAAACGTGGAGAAGATCTTT
FD973391       <-- CTCCTGAATCTTTGCTCTTGAGAAAACCGATAAATGTGGAGAAGATCTTC
FD955652       <-- CTCCTGAATCTTTGCTCTTGAGAAAACCGATAAACGTGGAGAAGATCTTT
EW716576       <-- CTCCTGAATCTTTGCTCTTGAGAAAACCGATAAACGTGGAGAAGATCTTT
FD551439       <-- CTCCTGAATCTTTGCTCTTGAGAAAACCGATAAACGTGGAGAAGATCTTT
FD533381       <-- CTCCTGAATCTTTGCTCTTGAGAAAACCGATAAACGTGGAGAAGATCTTT
FD551761       <-- CTCCTGAATCTTTACTCTTGAGAAAACCGATAAACGTGGAGAAGATCTTG
EY897171       <-- CTCCTGAATCTTTGCTCTTGAGAAAACCGATAAACGTGGAGAAGATCTTT
EX750169       <-- CTCCTGAATCTTTGCTCTTGAGAAAACCGATAAACGTGGAGAAGATCTTT
EW717565       <-- CTCCTGAATCTTTGCTCTTGAGAAAACCGATAAACGTGGAGAAGATCTTT
FD568548       <-- .......ATCTTTGCTCTTGAGAAAACCGATAAACGTGGAGAAGATCTTT
EW721463       --> CTCCTGAATCTTTGCTCTTGAGAAAACCGATAAACGTGGAGAAGATCTTT
EW721968       --> CTCCTGAATCTTTGCTCTTGAGAAAACCGATAAACGTGGAGAAGATCTTT
FD539419       --> CTCCTGAATCTTTGCTCTTGAGAAAACCGATAAACGTGGAGAAGATCTTT
EX760988       --> CTCCTGAATCTTTGCTCTTGAGAAAACCGATAAATGTGGAGAAGATCTTC
FD547605       --> CTCCTGAATCTTTACTCTTGAGAAAACCGATAAACGTGGAGAAGATCTTG
EY893558       --> CTCCTGAATCTTTGCTCTTGAGAAAACCGATAAACGTGGAGAAGATCTTT
FD529578       --> CTCCTGAATCTTTGCTCTTGAGAAAACCGATAAACGTGGAGAAGATCTTT
FD975563       --> CTCCTGAATCTTTGCTCTTGAGAAAACCGATAAACGTGGAGAAGATCCTT
FD969098       --> CTCCTGAATCTTTGCTCTTGAGAAAACCGATAAATGTGGAGAAGATCTTC
FD572875       --> CTCCTGAATCTTTGCTCTTGAGAAAACCGATAAACGTGGAGAAGATCTTT
FD942721       --> CTCCTGAATCTTTGCTCTTGAGAAAACCGATAAACGTGGAGAAGATCTTT
FD951693       --> CTCCTGAATCTTTGCTCTTGAGAAAACCGATAAACGTGGAGAAGATCTTT

               551    -    601
UN23476        --> GACCCAACTGAAGCCTTTTCGGGTGGAGTTGCTAGAGGAGGCTCAGGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD946628       <-- GACCCAACTGAAGCCTTTTCGAGTGGAGTTGCTAGAGGAGGCTCAGGGTA  Raphanus sativus cv Early Scarlet Globe
FD973391       <-- GACCCAACTGAAGCCTTTTCGGGTGGGGTTGCTAGAGGAGGCTCAGGGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955652       <-- GACCCAACTGAAGCCTTTTCGGGTGGAGTTGCTAGAGGAGGCTCAGGGTA  Raphanus sativus cv Rat-Tail Radish #3870
EW716576       <-- GACCCAACTGAAGCCTTTTCGAGTGGAGTTGCTAGAGGAGGCTCAGGGTA  Raphanus sativus var. oleiformis
FD551439       <-- GACCCAACTGAAGCCTTTTCGGGTGGAGTTGCTAGAGGAGGCTCAGGGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD533381       <-- GACCCAACTGAAGCCTTTTCGGGTGGAGTTGCTAGAGGAGGCTCAGGGTA  Raphanus raphanistrum subsp. maritimus
FD551761       <-- GACCCAACTGAAGCCTTTTCGGGTGGGGTTGCTAGAGGAGGCTCAGGGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897171       <-- GACCCAACTGAAGCCTTTTCGGGTGGAGTTGCTAGAGGAGGCTCAGGGTA  Raphanus raphanistrum subsp. maritimus
EX750169       <-- GACCCAACTGAAGCCTTTTCGGGTGGAGTTGCTAGAGGAGGCTCAGGGTA  Raphanus raphanistrum subsp. maritimus
EW717565       <-- GACCCAACTGAAGCCTTTTCGAGTGGAGTTGCCAGAGGAGGCTCAGGGTA  Raphanus sativus var. oleiformis
FD568548       <-- GACCCAACTGAAGCCTTTTCGGGTGGAGTTGCTAGAGGAGGCTCAGGGTA  Raphanus sativus cv Early Scarlet Globe
EW721463       --> GACCCAACTGAAGCCTTTTCGAGTGGAGTTGCCAGAGGAGGCTCAGGGTA  Raphanus sativus var. oleiformis
EW721968       --> GACCCAACTGAAGCCTTTTCGAGTGGAGTTGCTAGAGGAGGCTCAGGGTA  Raphanus sativus var. oleiformis
FD539419       --> GACCCAACTGAAGCCTTTTCGGGTGGAGTTGCTAGAGGAGGCTCAGGGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760988       --> GACCCAACTGAAGCCTTTTCGGGTGGGGTTGCTAGAGGAGGCTCAGGGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547605       --> GACCCAACTGAAGCCTTTTCGGGTGGGGTTGCTAGAGGAGGCTCAGGGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893558       --> GACCCAACTGAAGCCTTTTCGGGTGGAGTTGCTAGAGGAGGCTCAGGGTA  Raphanus raphanistrum subsp. maritimus
FD529578       --> GACCCAACTGAAGCCTTTTCGGGTGGAGTTGCTAGAGGAGGCTCAGGGTA  Raphanus raphanistrum subsp. maritimus
FD975563       --> GACCCAACTGAAGCCTTTTCGGGTGGAGTTGCTAGAGGAGGCTCAGGGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969098       --> GACCCAACTGAAGCCTTTTCGGGTGGGGTTGCTAGAGGAGGCTCAGGGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD572875       --> GACCCAACTGAAGCCTTTTCGGGTGGAGTTGCTAGAGGAGGCTCAGGGTA  Raphanus sativus cv Early Scarlet Globe
FD942721       --> GACCCAACTGAAGCCTTTTCGAGTGGAGTTGCTAGAGGAGGCTCAGGGTA  Raphanus sativus cv Early Scarlet Globe
FD951693       --> GACCCAACTGAAGCCTTTTCGGGTGGAGTTGCTAGAGGAGGCTCAGGGTA  Raphanus sativus cv Rat-Tail Radish #3870

               601    -    651
UN23476        --> CTTGTCTTCCAAAGTTTGTGTTATGACATCAGAATCCGGAACCCATTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD946628       <-- CTTGTCTTCCAAAGTTTGTGTTATGACATCAGAATCCGGAACCCATTTCT
FD973391       <-- CTTGTCTTCCAAAGACTGTGTTATGACATCAGAATCCGGAACCCATTTCT
FD955652       <-- CTTGTCTTCCAAAGTTTGTGTTATGACATCAGAATCCGGAACCCATTTCT
EW716576       <-- CTTGTCTTCCAAAGTTTGTGTTATGACATCAGAATCCGGAACCCATTTCT
FD551439       <-- CTTGTCTTCCAAAGTTTGTGTTATGACATCAGAATCCGGAACCCATTTCT
FD533381       <-- CTTGTCTTCCAAAGTTTGTGTTATGACATCAGAATCCGGAACCCATTTCT
FD551761       <-- CTTGTCTTCCAAAGCTTGTGTTATAACATCAGAATCCGGAACCCATTTCT
EY897171       <-- CTTGTCTTCCAAAG--TGTGTTATGACATCAGAATCCGGAACCCATTTCT
EX750169       <-- CTTGTCTTCCAAAGTTTGTGTTATGACATCAGAATCCGGAACCCATTTCT
EW717565       <-- CTTGTCTTCCAAAGTTTGTGTTATGACATCAGAATCCGGAACCCATTTCT
FD568548       <-- CTTGTCTTCCAAAGTTTGTGTTATGACATCAGAATCCGGAACCCATTTCT
EW721463       --> CTTGTCTTCCAAAGTTTGTGTTATGACATCAGAATCCGGAACCCATTTCT
EW721968       --> CTTGTCTTCCAAAGTTTGTGTTATGACATCAGAATCCGGAACCCATTTCT
FD539419       --> CTTGTCTTCCAAAGTTTGTGTTATGACATCAGAATCCGGAACCCATTTCT
EX760988       --> CTTGTCTTCCAAAGACTGTGTTATGACATCAGAATCCGGAACCCATTTCT
FD547605       --> CTTGTCTTCCAAAGCTTGTGTTATAACATCAGAATCCGGAACCCATTTCT
EY893558       --> CTTGTCTTCCAAAGT--GTGTTATGACATCAGAATCCGGAACCCATTTCT
FD529578       --> CTTGTCTTCCAAAGTTTGTGTTATGACATCAGAATCCGGAACCCATTTCT
FD975563       --> CTTGTCTTCCAAAGTTTGTGTTATGACATCAGAATCCGGAACCCATTTCT
FD969098       --> CTTGTCTTCCAAAGACTGTGTTATGACATCAGAATCCGGAACCCATTTCT
FD572875       --> CTTGTCTTCCAAAGTTTGTGTTATGACATCAGAATCCGGAACCCATTTCT
FD942721       --> CTTGTCTTCCAAAGTTTGTGTTATGACATCAGAATCCGGAACCCATTTCT
FD951693       --> CTTGTCTTCCAAAGTTTGTGTTATGACATCAGAATCCGGAACCCATTTCT

               651    -    701
UN23476        --> CATCAAACTTCACCACTGGGACTTTACCTTCTGCACTAATTTGCAAGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD946628       <-- CATCAAACTTCACCACTGGAACTTTACCTTCTGCACTAATTCGCAAGAAC  Raphanus sativus cv Early Scarlet Globe
FD973391       <-- CATCAAACTTCACCACTGGGACTTTACCTTCTGCACTAATTTGCAAGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955652       <-- CATCAAACTTCACCACTGGGACTTTACCTTCTGCACTAATTTGCAAGAAC  Raphanus sativus cv Rat-Tail Radish #3870
EW716576       <-- CATCAAACTTCACCACTGGAACTTTACCTTCTGCACTAATTTGCAAGAAC  Raphanus sativus var. oleiformis
FD551439       <-- CATCAAACTTCACCACTGGGACTTTACCTTCTGCACTAATTTGCAAGAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD533381       <-- CATCAAACTTCACCACTGGGACTTTACCTTCTGCACTAATTTGCAAGAAC  Raphanus raphanistrum subsp. maritimus
FD551761       <-- CATCAAACTTCACCACTGGGACTTTACCTTCTGCACTAATTTGCAAGAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897171       <-- CATCAAACTTCACCACTGGGACTTTACCTTCTGCACTAATTTGCAAGAAC  Raphanus raphanistrum subsp. maritimus
EX750169       <-- CATCAAACTTCACCACTGGGACTTTACCTTCTGCACTAATTTGCAAGAAC  Raphanus raphanistrum subsp. maritimus
EW717565       <-- CATCAAACTTCACCACTGGAACTTTACCTTCTGCACTAATTTGCAAGAAC  Raphanus sativus var. oleiformis
FD568548       <-- CATCAAACTTCACCACTGG-ACTTTACCTTCTGCACTAATTTGCAAGAAC  Raphanus sativus cv Early Scarlet Globe
EW721463       --> CATCAAACTTCACCACTGGAACTTTACCTTCTGCACTAATTTGCAAGAAC  Raphanus sativus var. oleiformis
EW721968       --> CATCAAACTTCACCACTGGAACTTTACCTTCTGCAC..............  Raphanus sativus var. oleiformis
FD539419       --> CATCAAACTTCACCACTGGGACTTTACCTTCTGCACTAATTTGCAAGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760988       --> CATCAAACTTCACCACTGGGACTTTACCTTCTGCACTAATTTGCAAGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547605       --> CATCAAACTTCACCACTGGGACTTTACCTTCTGCACTAATTTGCAAGAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893558       --> CATCAAACTTCACCACTGGGACTTTACCTTCTGCACTAATTTGCAAGAAC  Raphanus raphanistrum subsp. maritimus
FD529578       --> CATCAAACTTCACCACTGGGACTTTACCTTCTGCACTAATTTGCAAGAAC  Raphanus raphanistrum subsp. maritimus
FD975563       --> CATCAAACTTCACCACTGGGACTTTACCTTCTGCACTAATTTGCAAGAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969098       --> CATCAAACTTCACCACTGGGACTTTACCTTCTGCACTAATTTGCAAGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD572875       --> CATCAAACTTCACCACTGG-ACTTTACCTTCTGCACTAATTTGCAAGAAC  Raphanus sativus cv Early Scarlet Globe
FD942721       --> CATCAAACTTCACCACTGGAACTTTACCTTCTGCACTAATTCGCAAGAAC  Raphanus sativus cv Early Scarlet Globe
FD951693       --> CATCAAACTTCACCACTGGGACTTTACCTTCTGCACTAATTTGCAAGAAC  Raphanus sativus cv Rat-Tail Radish #3870

               701    -    751
UN23476        --> CACTCAGGCTTGTTACTCAAATCCACCATTTTCATGTCATAAGGTACATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD946628       <-- CACTCAGGCTTGTTACTCAAATCCACCATTTTCATGTCATAAGGcttatc
FD973391       <-- CACTCTGGCTTGTTACTCAAATCCACCATTTTCATGCCATAAGGTACATG
FD955652       <-- CACTCAGGCTTGTTACTCAAATCCACCATTTTCATGTCATAAGGTACATG
EW716576       <-- CACTCAGGCTTGTTACTCAAATCCACCATTTTCATGTCATAAGGTACATG
FD551439       <-- CACTCAGGCTTGTTACTCAAATCCACCATTTTCATGTCATAAGGTACATG
FD533381       <-- CACTCAGGCTTGTTACTCAAATCCACCATTTTCATGTCATAAGGTACATG
FD551761       <-- CACTCTGGCTTGTTACTCAAATCCACCATTTTCATGTCATAAGGTACATG
EY897171       <-- CACTCAGGCTTGTTACTCAAATCCACCATTTTCATGTCATAAGGTACATG
EX750169       <-- CACTCAGGCTTGTTACTCAAATCCACCATTTTCATGTCATAAGGTACATG
EW717565       <-- CACTCAGGCTTGTTACTCAAATCCACCATTTTCATGTCATAAGGTACATG
FD568548       <-- CACTCAGGCTTGTTACTCAAATCCACCATTTTCATGTCATAAGGTACATG
EW721463       --> CACTCAGGCTTGTTACTCAAATCCACCATTTTCATGTCATAAGGTACATG
EW721968       --> ..................................................
FD539419       --> CACTCAGGCTTGTTACTCAAATCCACCATTTTCATGTCATAAGGTACATG
EX760988       --> CACTCTGGCTTGTTACTCAAATCCACCATTTTCATGTCATAAGGTACATG
FD547605       --> CACTCTGGCTTGTTACTCAAATCCACCATTTTCATGTCATAAGGTACATG
EY893558       --> CACTCAGGCTTGTTACTCAAATCCACCATTTTCATGTCATAAGGTACATG
FD529578       --> CACTCAGGCTTGTTACTCAAATCCACCATTTTCATGTCATAAGGTACATG
FD975563       --> CACTCAGGCTTGTTACTCAAATC...........................
FD969098       --> CACTCTGGCTTGTTACTCAAATCCACCATTTTCATGCCATAAGGTACATG
FD572875       --> CACTCAGGCTTGTTACTCAAATCCACCATTTTCATGTCATAAGGTACATG
FD942721       --> CACTCAGGCTTGTTACTCAAATCCACCATTTTCATGTCATAAGGcttatc
FD951693       --> CACTCAGGCTTGTTACTCAAATCCACCATTTTCATGTCATAAGGTACATG

               751    -    801
UN23476        --> CTTCTCCTCCATAGTCAACAACACCCTTTGGCAAAAAGGGCAGTCTCCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD946628       <-- attgttta..........................................  Raphanus sativus cv Early Scarlet Globe
FD973391       <-- CTTCTCCTCCATCGTCAGCAACACCCTTTGttcttgtcaattctcc....  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955652       <-- CTTCTCCTCCATAGTCAACAACACCCTTTGGCAAAAAGGGCAGTCTCCGA  Raphanus sativus cv Rat-Tail Radish #3870
EW716576       <-- CTTCTCCTCCATAGTCAACAACACCCTTTGGCAAAAAGGGCAGTCTCCGA  Raphanus sativus var. oleiformis
FD551439       <-- CTTCTCCTCCATAGTCAACAACACCCTTTGGCAAAAAGGGCAGTCTCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD533381       <-- CTTCTCCTCCATAGTCAACAACACCCTTTGGCAAAAAGGGCAGTCTCCGA  Raphanus raphanistrum subsp. maritimus
FD551761       <-- CTTCTCCTCCATCGTCAGCAACACCCTTTGGCAAAAAGGGCAGTCTCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897171       <-- CTTCTCCTCCATAGTCAACAACACCCTTTGGCAAAAAGGGCAGTCTCCGA  Raphanus raphanistrum subsp. maritimus
EX750169       <-- CTTCTCCTCCATAGTCAACAACACCCTTTGGCAAAAAGGGCAGTCTCCGA  Raphanus raphanistrum subsp. maritimus
EW717565       <-- CTTCTCCTCCATAGTCAACAACACCCTTTGGCAAAAAGGGCAGTCTCCGA  Raphanus sativus var. oleiformis
FD568548       <-- CTTCTCCTCCATAGTCAACAACACCCTTTGGCAAAAAGGGCAGTCTCCGA  Raphanus sativus cv Early Scarlet Globe
EW721463       --> CTTCTCCTCCATAGTCAACAACACCCTTTG....................  Raphanus sativus var. oleiformis
EW721968       --> ..................................................  Raphanus sativus var. oleiformis
FD539419       --> CTTCTCCTCCATGGTCAGCAACACCCTTTGGCA.................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760988       --> CTTCTCCTCCATCGTCAGCAACACCCTTTGGCAA................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547605       --> CTTCTCCTCCATCGTCAGCAACACCCTTTGGCAA................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893558       --> CTTCTCCTCCATAGTCAACAACACCCTTTGGCAA................  Raphanus raphanistrum subsp. maritimus
FD529578       --> CTTCTCCTCCATAGTCAACAACA...........................  Raphanus raphanistrum subsp. maritimus
FD975563       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969098       --> CTTCTCCTCCATCGTCAGCAACACCCTTTGttcttgtcaattctcc....  Raphanus raphanistrum subsp. raphanistrum (MS)
FD572875       --> CTTCTCCTCCATAGTCAACAACACCCTTTGGCAAAAAGGGCAGTCTCCGA  Raphanus sativus cv Early Scarlet Globe
FD942721       --> attgttta..........................................  Raphanus sativus cv Early Scarlet Globe
FD951693       --> CTTCTCCTCCATAGTCAACAACACCCTTTGGCAA................  Raphanus sativus cv Rat-Tail Radish #3870

               801    -    851
UN23476        --> GCTTGTTGGGTGTGGTGATGGAAGCTTTGACGCAGATTTCGAGAGGAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD946628       <-- ..................................................
FD973391       <-- ..................................................
FD955652       <-- GCTTGTTGGGTGTGGTGATGGAAGCTTTGACGCAGATTTCGAGAGGAGCA
EW716576       <-- GCTTGTTGGGTGTGGTGATGGAAGCTTTGACGCAGATTTCGAGCGGAGCA
FD551439       <-- GCTTGTTGGGTGTGGTGATGGAAGCTTTGACGCAGATTTCGAGAGGAGCA
FD533381       <-- GCTTGTTGGGTGTGGTGATGGAAGCTTTGACGCAGATTTCGAGAGGAGCA
FD551761       <-- GCTTGTTGGGTGTGGTGATGGAAGCTTTGACGCAGATTTCGAGAGGAGCA
EY897171       <-- GCTTGTTGGGTGTGGTGATGGAAGCTTTGACGCAGATTTCGAGAGGAGCA
EX750169       <-- GCTTGTTGGGTGTGGTGATGGAAGCTTTGACGCAGATTTCGAGAGGAGCA
EW717565       <-- GCTTGTTGGGTGTGGTGATGGAAGCTTTGACGCAGATTTCGAGCGGAGCA
FD568548       <-- GCTTGTTGGGTGTGGTGATGGAAGCTTTGACGCAGATTTCGAGAGGAGCA
EW721463       --> ..................................................
EW721968       --> ..................................................
FD539419       --> ..................................................
EX760988       --> ..................................................
FD547605       --> ..................................................
EY893558       --> ..................................................
FD529578       --> ..................................................
FD975563       --> ..................................................
FD969098       --> ..................................................
FD572875       --> GCTTGTTGGGTGTGGTGATGGAAGCTTTGACGCAGATTTCGAGAGGAGCA
FD942721       --> ..................................................
FD951693       --> ..................................................

               851    -    901
UN23476        --> GCCGCCATAGCCATCGTTCCGAACCGGGCGGTTCTTCTCGGTTTAGTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD946628       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD973391       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955652       <-- GCGGCCATGGCCATCc..................................  Raphanus sativus cv Rat-Tail Radish #3870
EW716576       <-- GCCGCCATAGCCATCGTTCCGAACCGGGCGGTTCTTCTCGGTTTAGTCAA  Raphanus sativus var. oleiformis
FD551439       <-- GCCGCCATAGCCATCGTTCCGAACCGGGCGGTTCTTCTCAGTTTAGTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD533381       <-- GCCGCCATAGCCATCGTTCCGAACCGGGCGGTTCTTCTCAGTTTAGTCAA  Raphanus raphanistrum subsp. maritimus
FD551761       <-- CCCGCCATAGCCATCGTTCCTAACCGGGCGGTTCTTCTCGGTTTAGTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897171       <-- GCCGCCATAGCCATCGTTCCGAACCGGGCGGTTCTTCTCAGTTTAGTCAA  Raphanus raphanistrum subsp. maritimus
EX750169       <-- GCCGCCATAGCCATCGTTCCGAACCGGGCGGTTCTTCTCAGTTTAGTCAA  Raphanus raphanistrum subsp. maritimus
EW717565       <-- GCCGCCATAGCCATCGTTCCGAACCGGGCGGTTCTTCTCGGTTTAGTCAA  Raphanus sativus var. oleiformis
FD568548       <-- GCGGCCACGGCCATCGTTCCGAGCCGGGCGGTTCTTCTCGGTTTAGTCAA  Raphanus sativus cv Early Scarlet Globe
EW721463       --> ..................................................  Raphanus sativus var. oleiformis
EW721968       --> ..................................................  Raphanus sativus var. oleiformis
FD539419       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760988       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547605       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893558       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD529578       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD975563       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969098       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD572875       --> GCggc.............................................  Raphanus sativus cv Early Scarlet Globe
FD942721       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD951693       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               901    -    951
UN23476        --> ACCGCACCGCTTGATGAATCCGGCGCGGCTGACTGACGCCGACAGAACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD946628       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD973391       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955652       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW716576       <-- ACCGCATCGCTTGATAAATCCGGCGCGGCTGACTGACGCCGACAGAACAA  Raphanus sativus var. oleiformis
FD551439       <-- ACCGCACCGCTTGc....................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD533381       <-- ACCGCACCGCTTGATGAATCCCGCGCGGCTGACTGACGCCGACAGAACAC  Raphanus raphanistrum subsp. maritimus
FD551761       <-- ACCGCATCGCTTGATAAATCCGGCGCGGCTGACTGACGCCGACAGAACAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897171       <-- ACCGCACCGCTTGATGAATCCCGCGCGGCTGACTGACGCCGACAGAACAC  Raphanus raphanistrum subsp. maritimus
EX750169       <-- ACCGCACCGCTTGATGAATCCCGCGCGGCTGACTGACGCCGACAGAACAC  Raphanus raphanistrum subsp. maritimus
EW717565       <-- ACCGCATCGCTTGATAAATCCGGCGCGGCTGACTGACGCCGACAGAACAA  Raphanus sativus var. oleiformis
FD568548       <-- ACCGCACCGCTTGATCAATCCGGTGCCGCTGACTGACGCCGACAGAACAC  Raphanus sativus cv Early Scarlet Globe
EW721463       --> ..................................................  Raphanus sativus var. oleiformis
EW721968       --> ..................................................  Raphanus sativus var. oleiformis
FD539419       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760988       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547605       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893558       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD529578       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD975563       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969098       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD572875       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD942721       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD951693       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               951    -   1001
UN23476        --> CGGCGGTGCTTGGTTGAAACCTAAGGCTTATCATTGT-TTATCTTTTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD946628       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD973391       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955652       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW716576       <-- CGGCGGTGCTTGGTTGAAACCTAAGGCTTATCATTTTATTATCT......  Raphanus sativus var. oleiformis
FD551439       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD533381       <-- CGGCGGTGCTTGGTTGAAACCTAAGGCCTATCATTGT-TTATCTTTTCTC  Raphanus raphanistrum subsp. maritimus
FD551761       <-- CGGCGGTGCTTGGTTGAAACCTAAGGCTTATCATTTTATTATCTTTTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897171       <-- CGGCGGTGCTTGGTTGAAACCTAAGGCTTATCATTGT-TTATCTTTTCTC  Raphanus raphanistrum subsp. maritimus
EX750169       <-- CGGCGGTGCTTGGTTGAAACCTAAGGCTTATCATTGT-TTATCTTTTCTC  Raphanus raphanistrum subsp. maritimus
EW717565       <-- CGGCGGTGCTTGGTTGAAACCTAAGGCTTATCATTTTATTATCTTTTCTC  Raphanus sativus var. oleiformis
FD568548       <-- CGGCGGTGCTTGGTTGAAACCTAAGGCTTATCATTGT-TTATCTTTTCTC  Raphanus sativus cv Early Scarlet Globe
EW721463       --> ..................................................  Raphanus sativus var. oleiformis
EW721968       --> ..................................................  Raphanus sativus var. oleiformis
FD539419       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760988       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547605       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893558       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD529578       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD975563       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969098       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD572875       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD942721       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD951693       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               1001   -   1051
UN23476        --> TGTTCTTGTCAATTCTCCGACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~
FD946628       <-- .......................
FD973391       <-- .......................
FD955652       <-- .......................
EW716576       <-- .......................
FD551439       <-- .......................
FD533381       <-- TGTTCTTGTCAATTCTCCGACCC
FD551761       <-- TGTTCTTGTCcc...........
EY897171       <-- TGTTCTTGTCAATTCTCCcc...
EX750169       <-- TGTTCTTGTCAATTCTCCGACCC
EW717565       <-- TGTTCTTGTCcc...........
FD568548       <-- TGTTCTTGTCAATTTTCCGACCC
EW721463       --> .......................
EW721968       --> .......................
FD539419       --> .......................
EX760988       --> .......................
FD547605       --> .......................
EY893558       --> .......................
FD529578       --> .......................
FD975563       --> .......................
FD969098       --> .......................
FD572875       --> .......................
FD942721       --> .......................
FD951693       --> .......................