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Alignment for radish unigene UN23482

               -2     -     48
UN23482        --> ...GGAAGGTGTGTGTCTCTCTCACTTCCCCTCGTCATCGTCTGAGCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546628       <-- ..................................................
FY437746       <-- ..................................................
EV539840       <-- ..................................................
EV543741       <-- ..................................................
EV571600       <-- ..................................................
EX760945       <-- ..................................................
EX776960       <-- ..................................................
EX760235       <-- ..................................................
EV540662       <-- ..................................................
EX752226       <-- ..................................................
EX753630       <-- ..................................................
FD982513       <-- ..................................................
EV573052       <-- ..................................................
EY895538       <-- ..................................................
EY935962       <-- ..................................................
FD545419       <-- ..................................................
FD552866       <-- ..................................................
FD538039       <-- ..................................................
FD976524       <-- ..................................................
FY437052       <-- ..................................................
EV547255       <-- ..................................................
EW739154       <-- ..................................................
EY936490       <-- ..................................................
FD944335       <-- ..................................................
EX908014       <-- ..................................................
FD969402       <-- ..................................................
EX757327       --> ...GGAAGGTGTGTGTCTCTCTCACTTCCCCTCGTCATCGTCTGAGCTTA
EY940782       --> ...GGAAGGTGTGTGTCTCTCTCACTTCCCCTCGTCATCGTCTGAGCTTA
FD971718       --> ...GGAAGGTGTGTGTCTCTCTCACTTCCCCTCGTCATCGTCTGAGCTTA
FD973291       --> ...GGAAGGTGTGTGTCTCTCTCACTTCCCCTCGTCATCGTCTGAGCTTA
EV535078       --> gggatAAGGTGTGTGTCTCTCTCACTTCCCCTCGTCATCGTCTGAGCTTA
EY899849       --> .....ggaagGTGTGTCTCTCTCACTTCCCCTCGTCATCGTCTGAGCTTA
EY940159       --> ...............................ggGTCATCGTCTGAGCTTA
EV536148       --> ..................................ggATCGTCTGAGCTTA
EV547974       --> ..................................ggATCGTCTGAGCTTA
EV551550       --> ..................................ggATCGTCTGAGCTTA
EW733939       --> ..................................ggATCGTCTGAGCTTA
EY898970       --> ..................................ggATCGTCTGAGCTTA
FD541836       --> ..................................ggATCGTCTGAGCGTA
FD948573       --> ..................................ggATCGTCTGAGCTTA
FD973772       --> ..................................ggATCGTCTGAGCTTA
FD980663       --> ...................................gATCGTCTGAGCTTA
EY939500       --> .......................................GTCTGAGCTTA
EX748220       --> .................................................g
EV568291       --> ..................................................
EX764517       --> ..................................................
FD990242       --> ..................................................
EX750077       --> ..................................................
EV552321       --> ..................................................
EV566479       --> ..................................................
EX756422       --> ..................................................
EX773109       --> ..................................................

               48     -     98
UN23482        --> CCAAAACTCCGGTCAAATGGCGATGACGACTGCTACACTCTTCCATGCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546628       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437746       <-- ..................................................  Raphanus sativus cv GSK3-1
EV539840       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543741       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571600       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX760945       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776960       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX760235       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540662       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752226       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX753630       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD982513       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV573052       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY895538       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY935962       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD545419       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552866       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD538039       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976524       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437052       <-- ..................................................  Raphanus sativus cv GSK3-1
EV547255       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739154       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY936490       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD944335       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX908014       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD969402       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757327       --> CCAAAACTCCGGTCAAATGGCGATGACGACTGCTACACTCTTCCATGCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940782       --> CCAAAACTCCGGTCAAATGGCGATGACGACTGCTACACTCTTCCATGCAC  Raphanus sativus cv Early Scarlet Globe
FD971718       --> CCAAA-CTCCGGTCAAATGGCGATGACGACTGCTACACTCTTCCATGCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973291       --> CCAAAACTCCGGTCAAATGGCGATGACGACTGCTACACTCTTCCATGCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535078       --> CCAAAACTCCGGTCAAATGGCGATGACGACTGCTACACTCTTCCATGCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899849       --> CCAAA-CTCCGGTCAAATGGCGATGACAACGACTACACTCTTCCATGCAC  Raphanus raphanistrum subsp. maritimus
EY940159       --> CCAAAACTCCGGTCAAATGGCGATGACGACTGCTACACTCTTCCATGCAC  Raphanus sativus cv Early Scarlet Globe
EV536148       --> CCAAAACTCCGGTCAAATGGCGATGACGACTGCTACACTCTTCCATGCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547974       --> CCAAA-CTCCGGTCAAATGGCGATGACAACGACTACACTCTTCCATGCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV551550       --> CCAAAACTCCGGTCAAATGGCGATGACGACTGCTACACTCTTCCATGCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW733939       --> CCAAAACTCCGGTCAAATGGCGATGACGACTGCTACACTCTTCCATGCAC  Raphanus sativus cv Rat-Tail Radish #3870
EY898970       --> CCAAA-CTCCGGTCAAATGGCGATGACAACGACTACACTCTTCCATGCAC  Raphanus raphanistrum subsp. maritimus
FD541836       --> CCAAAACTCCGGTCAAATGGCGATGACGACTGCTACACTCTTCCATGCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948573       --> CCAAAACTCCGGTCAAATGGCGATGACGACTGCTACACTCTTCCATGCAC  Raphanus sativus cv Early Scarlet Globe
FD973772       --> CCAAAACTCCGGTCAAATGGCGATGGCGACTGCTACACTCTTCCATGCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980663       --> CCAAA-CTCCGGTCAAATGGCGATGACAACGACTACACTCTTCCATGCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939500       --> CCAAAACTCCGGTCAAATGGCGATGACGACTGCTACACTCTTCCATGCAC  Raphanus sativus cv Early Scarlet Globe
EX748220       --> accAAACTCCGGTCAAATGGCGATGACAACGACTACACTCTTCCATGCAC  Raphanus raphanistrum subsp. maritimus
EV568291       --> ..................................................  Raphanus raphanistrum subsp. landra
EX764517       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD990242       --> ..................................................  Raphanus raphanistrum subsp. landra
EX750077       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV552321       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566479       --> ..................................................  Raphanus raphanistrum subsp. landra
EX756422       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773109       --> ..................................................  Raphanus raphanistrum subsp. landra

               98     -    148
UN23482        --> TTGTTCCTTCCAACAGTTACAAATCCGGAGCTGTTTCCTCTTCGTTCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546628       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437746       <-- ..................................................  Raphanus sativus cv GSK3-1
EV539840       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543741       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571600       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX760945       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776960       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX760235       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540662       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752226       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX753630       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD982513       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV573052       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY895538       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY935962       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD545419       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552866       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD538039       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976524       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437052       <-- ..................................................  Raphanus sativus cv GSK3-1
EV547255       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739154       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY936490       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD944335       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX908014       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD969402       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757327       --> TTGTTCCTTCCAACAGTTACAAATCCGGAGCTGTTTCCTCTTCGTTCGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940782       --> TTGTTCCTTCCAACAGTTACAAAACAGGAGCTGTGTCCTCTTCGTTAGTC  Raphanus sativus cv Early Scarlet Globe
FD971718       --> TTGTTCCTTCCAACAGTTACAAAACAGGAGCTGTGTCCTCTTCGTTAGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973291       --> TTGTTCCTTCCAACAGTTACAAATCCGGAGCTGTTTCCTCTTCGTTCGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535078       --> TTGTTCCTTCCAACAGTTACAAATCCGGAGCTGTTTCCTCTTCGTTCGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899849       --> TTGTTCCTTCCAACAGTTACAAATCCGGAGCTGTTTCCTCTTCGTTCGTC  Raphanus raphanistrum subsp. maritimus
EY940159       --> TTGTTCCTTCCAACAGTTACAAAACAGGAGCTGTGTCCTCTTCGTTAGTC  Raphanus sativus cv Early Scarlet Globe
EV536148       --> TTGTTCCTTCCAACAGTTACAAATCCGGAGCTGTTTCCTCTTCGTTCGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547974       --> TTGTTCCTTCCAACAGTTACAAATCCGGAGCTGTTTCCTCTTCGTTCGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV551550       --> TTGTTCCTTCCAACAGTTACAAAACAGGAGCTGTGTCCTCTTCGTTAGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW733939       --> TTGTTCCTTCCAACAGTTACAAAACAGGAGCTGTGTCCTCTTCGTTAGTC  Raphanus sativus cv Rat-Tail Radish #3870
EY898970       --> TTGTTCCTTCCAACAGTTACAAATCCGGAGCTGTTTCCTCTTCGTTCGTC  Raphanus raphanistrum subsp. maritimus
FD541836       --> TTGTTCCTTCCAACAGTTACAAATCCGGAGCTGTTTCCTCTTCGTTCGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948573       --> TTGTTCCTTCCAACAGTTACAAAACAGGAGCTGTGTCCTCTTCGTTAGTC  Raphanus sativus cv Early Scarlet Globe
FD973772       --> TTGTTCCTTCCAACAGTTACAAATCCGGAGCTGTTTCCTCTTCGTTCGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980663       --> TTGTTCCTTCCAACTGTTACAAAACAGGAGCTGTGTCCTCTTCGTTAGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939500       --> TTGTTCCTTCCAACAGTTACAAAACAGGAGCTGTGTCCTCTTCGTTAGTC  Raphanus sativus cv Early Scarlet Globe
EX748220       --> TTGTTCCTTCCAACAGTTACAAATCCGGAGCTGTTTCCCCTTCGTTCGTC  Raphanus raphanistrum subsp. maritimus
EV568291       --> ................................................gC  Raphanus raphanistrum subsp. landra
EX764517       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD990242       --> ..................................................  Raphanus raphanistrum subsp. landra
EX750077       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV552321       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566479       --> ..................................................  Raphanus raphanistrum subsp. landra
EX756422       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773109       --> ..................................................  Raphanus raphanistrum subsp. landra

               148    -    198
UN23482        --> TCAGTTCCGTCTTCTTCGTCGTCTCTCCAATTCCGCTCGCTTGTCTCGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546628       <-- ..................................................
FY437746       <-- ..................................................
EV539840       <-- ..................................................
EV543741       <-- ..................................................
EV571600       <-- ..................................................
EX760945       <-- ..................................................
EX776960       <-- ..................................................
EX760235       <-- ..................................................
EV540662       <-- ..................................................
EX752226       <-- ..................................................
EX753630       <-- ..................................................
FD982513       <-- ..................................................
EV573052       <-- ..................................................
EY895538       <-- ..................................................
EY935962       <-- ..................................................
FD545419       <-- ..................................................
FD552866       <-- ..................................................
FD538039       <-- ..................................................
FD976524       <-- ..................................................
FY437052       <-- ..................................................
EV547255       <-- ..................................................
EW739154       <-- ..................................................
EY936490       <-- ..................................................
FD944335       <-- ..................................................
EX908014       <-- ..................................................
FD969402       <-- ..................................................
EX757327       --> TCAGTTCCGTCTTCTTCGTCGTCTCTCCAATTCCGCTCGCTTGTCTCGGA
EY940782       --> TCAGTTCCGTCTTCTTCGTCGTCTCTCCAATTCCGCTCGCTTGTCTCGGA
FD971718       --> TCAGTTCCGTCTTCTTCGTCGTCTCTCCAATTCCGCTCGCTTGTCTCGGA
FD973291       --> TCAGTTCCGTCTTCTTCGTCGTCTCTCCAATTCCGTTCGCTTGTCTCGGA
EV535078       --> TCAGTTCCGTCTTCTTCGTCGTCTCTCCAATTCCGCTCGCTTGTCTCGGA
EY899849       --> TCAGTTCCGTCTTCT...................................
EY940159       --> TCAGTTCCGTCTTCTTCGTCGTCTCTCCAATTCCGCTCGCTTGTCTCGGA
EV536148       --> TCAGTTCCGTCTTCTTCGTCGTCTCTCCAATTCCGCTCGCTTGTCTCGGA
EV547974       --> TCAGTTCCGTCTTCTTCGTCGTCTCTCCAATTCCGCTCGCTTGTCTCGGA
EV551550       --> TCAGTTCCGTCTTCTTCGTCGTCTCTCCAATTCCGCTCGCTTGTCTCGGA
EW733939       --> TCAGTTCCGTCTTCTTCGTCGTCTCTCCAATTCCGCTCGCTTGTCTCGGA
EY898970       --> TCAGTTCCGTCTTCTTCGTCGTCTCTCCAATTCCGCTCGCTTGTCTCGGA
FD541836       --> TCAGTTCCGTCTTCTTCGTCGTCTCTCCAATTCCGCTCGCTTGTCTCGGA
FD948573       --> TCAGTTCCGTCTTCTTCGTCGTCTCTCCAATTCCGCTCGCTTGTCTCGGA
FD973772       --> TCAGTTCCGTCTTCTTCGTCGTCTCTCCAATTCCGCTCGCTTGTCTCGGA
FD980663       --> TCAGTTCCGTCTTCTTCGTCGTCTCTCCAATTCCGCTCGCTTGTCTCGGA
EY939500       --> TCAGTTCCGTCTTCTTCGTCGTCTCTCCAATTCCGCTCGCTTGTCTCGGA
EX748220       --> TCAGTTCCGTCTTCTTCGTCGTCTCTCCAATTCCGCTCGCTTGTCTCGGA
EV568291       --> TCAGTTCCGTCTTCTTCGTCGTCTCTCCAATTCCGCTCGCTTGTCTCGGA
EX764517       --> ..................................................
FD990242       --> ..................................................
EX750077       --> ..................................................
EV552321       --> ..................................................
EV566479       --> ..................................................
EX756422       --> ..................................................
EX773109       --> ..................................................

               198    -    248
UN23482        --> TTCAACGTCGGTTTATGCTCGGAGGAAGTTAACCGGAGATCTCAGAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546628       <-- ..................................GGAGATCTCAGAAGAG
FY437746       <-- ..................................................
EV539840       <-- ..................................................
EV543741       <-- ..................................................
EV571600       <-- ..................................................
EX760945       <-- ..................................................
EX776960       <-- ..................................................
EX760235       <-- ..................................................
EV540662       <-- ..................................................
EX752226       <-- ..................................................
EX753630       <-- ..................................................
FD982513       <-- ..................................................
EV573052       <-- ..................................................
EY895538       <-- ..................................................
EY935962       <-- ..................................................
FD545419       <-- ..................................................
FD552866       <-- ..................................................
FD538039       <-- ..................................................
FD976524       <-- ..................................................
FY437052       <-- ..................................................
EV547255       <-- ..................................................
EW739154       <-- ..................................................
EY936490       <-- ..................................................
FD944335       <-- ..................................................
EX908014       <-- ..................................................
FD969402       <-- ..................................................
EX757327       --> TTCAATGTCGGTTTATGCTCGGAGGAAGTTAACCGGAGATCTCAGAAGAG
EY940782       --> TTCAACGTCGGTTTATGCTCGGAAGAAGTTAACCGGAAATCTCAGAAGAG
FD971718       --> TTCAACGTCGGTTTATGCTCGGAGGAAGTTAACCGGAGATCTCAGAAGAG
FD973291       --> TTCAACGTCGGTTTATGCTCGGAGGAAGTTAACCGGAGATCTCAGAAGAG
EV535078       --> TTCAACGTCGGTTTATGCTCGGAGGAAGTTAACCGGAGATCTCAGAAGAG
EY899849       --> ..................................................
EY940159       --> TTCAACGTCGGTTTATGCTCGGAGGAAGTTAACCGGAGATCTCAGAAGAG
EV536148       --> TTCAACGTCGGTTTATGCTCGGAGGAAGTTAACCGGAGATCTCAGAAGAG
EV547974       --> TTCAACGTCGGTTTATGCTCGGAGGAAGTTAACCGGAGATCTCAGAAGAG
EV551550       --> TTCAACGTCGGTTTATGCTCGGAGGAAGTTAACCGGAGATCTCAGAAGAG
EW733939       --> TTCAACGTCGGTTTATGCTCGGAGGAAGTTAACCGGAGATCTCAGAAGAG
EY898970       --> CTCAACGTCGGTTTATGCCCGGAGGAAGTTAACCGGAGATCTCAGAAGAG
FD541836       --> TTCAACGTCGGTTTATGCTCGGAGGAAGTTAACCGGAGATCTCAGAAGAG
FD948573       --> TTCAACGTCGGTTTATGCTCGGAGGAAGTTAACCGGAGATCTCAGAAGAG
FD973772       --> TTCAACGTCGGTTTATGCTCGGAGGAAGTTAACCGGAGATCTCAGAAGAG
FD980663       --> TTCAACGTCGGTTTATGCTCGGAGGAAGTTAACCGGAGATCTTAGAAGAG
EY939500       --> TTCAACGTCGGTTTATGCTCGGAGGAAGTTAACCGGAGATCTCAGAAGAG
EX748220       --> CTCAACGTCGGTTTATGCTCGGAGGAAGTTAACCGGAGATCTCAGAAGAG
EV568291       --> TTCAACGTCGGTTTATGCTCGGAGGAAGTTAACCGGAGATCTCAGAAGAG
EX764517       --> ..................................................
FD990242       --> ..................................................
EX750077       --> ..................................................
EV552321       --> ..................................................
EV566479       --> ..................................................
EX756422       --> ..................................................
EX773109       --> ..................................................

               248    -    298
UN23482        --> TATCCTTAACTGTCTCCGCCGCCGCAGCAACTGAACCTCTCACCGTTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546628       <-- TATCTTTAACTGTCTCCGCCGCCGCAGCAACTGAGCCTCTCACCGTTCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437746       <-- ..................................................  Raphanus sativus cv GSK3-1
EV539840       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543741       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571600       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX760945       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776960       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX760235       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540662       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752226       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX753630       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD982513       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV573052       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY895538       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY935962       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD545419       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552866       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD538039       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976524       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437052       <-- ..................................................  Raphanus sativus cv GSK3-1
EV547255       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739154       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY936490       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD944335       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX908014       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD969402       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757327       --> TATCCTTAACTGTCTCCGTCGCTGCAGCAACTGAACCTCTCACCGTCCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940782       --> TATCCTTAACTGTCTCCGCCGCCGCAGCAACTGAgcc.............  Raphanus sativus cv Early Scarlet Globe
FD971718       --> TATCCTTAACTGTCTCCGCCGCCGCAGCAACTGAACCTCTCACCGTTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973291       --> TATCCTTAACTGTCTCCGTCGCTGCAGCAACTGAACCTCTCACCGTCCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535078       --> TATCCTTAACTGTCTCCGTCGCTGCAGCAACTGAACCTCTCACCGTCCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899849       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY940159       --> TATCCTTAACTGTCTCCGCCGCCGCAGCAACTGAGCCTCTCACCGTTCTG  Raphanus sativus cv Early Scarlet Globe
EV536148       --> TATCCTTAACTGTCTCCGTCGCTGCAGCAACTGAACCTCTCACCGTCCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547974       --> TATCCTTAACTGTCTCCGCCGCCGCAGCAACTGAACCTCTCACCGTCCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV551550       --> TATCCTTAACTGTCTCCGCCGCCGCAGCAACTGAGCCTCTCACCGTTCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW733939       --> TATCCTTAACTGTCTCCGCCGCCGCAGCAACTGAGCCTCTCACCGTTCTG  Raphanus sativus cv Rat-Tail Radish #3870
EY898970       --> TATCCTTAACTGTCTCCGCCGCCGCAGCAACTGAGCCTCTCACCGTTCTC  Raphanus raphanistrum subsp. maritimus
FD541836       --> TATCCTTAACTGTCTCCGTCGCTGCAGCAACTGAACCTCTCACCGTCCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948573       --> TATCCTTAACCGTCTCCGCCGCCGCAGCAACTGAGCCTCTCACCGTTCTG  Raphanus sativus cv Early Scarlet Globe
FD973772       --> TATCCTTAACTGTCTCCGTCGCTGCAGCAACTGAACCTCTCACCGTCCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980663       --> TATCCTTAACTGTCTCCGCCGCCGCAGCAACTGAACCTCTCACCGTCCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939500       --> TATCCTTAACTGTCTCCGCCGCCGCAGCAACTGAGCCTCTCACCGTTCTG  Raphanus sativus cv Early Scarlet Globe
EX748220       --> TATCCTTAACTGTCTCCGCCGCCGCAGCAACTGAGCCTCTCACCGTTCTC  Raphanus raphanistrum subsp. maritimus
EV568291       --> TATCCTTAACTGTCTCCGCCGCCTCAGCAACTAAGCCTCTCACCGTTCTG  Raphanus raphanistrum subsp. landra
EX764517       --> ...........................gAACTGAACCTCTCACCGTCCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD990242       --> ..................................................  Raphanus raphanistrum subsp. landra
EX750077       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV552321       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566479       --> ..................................................  Raphanus raphanistrum subsp. landra
EX756422       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773109       --> ..................................................  Raphanus raphanistrum subsp. landra

               298    -    348
UN23482        --> GTCACCGGTGCCGGTGGCAGAACAGGGCAAATCGTGTACAAGAAGTTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546628       <-- GTCACCGGTGCCGGTGGAAGAACAGGGCAAATCGTGTACAAGAAGTTGAA
FY437746       <-- .....CGGTGCCGGTGGAAGAACAGGGCAAATCGTGTACAAGAAGTTGAA
EV539840       <-- ............GGTGGCAGAACAGGGCAAATCGTGTACAAGAAGTTGAA
EV543741       <-- ..............TGGCAGAACAGGGCAAATCGTGTACAAGAAGTTGAA
EV571600       <-- ....................................TACAAGAAGTTGAA
EX760945       <-- ..................................................
EX776960       <-- ..................................................
EX760235       <-- ..................................................
EV540662       <-- ..................................................
EX752226       <-- ..................................................
EX753630       <-- ..................................................
FD982513       <-- ..................................................
EV573052       <-- ..................................................
EY895538       <-- ..................................................
EY935962       <-- ..................................................
FD545419       <-- ..................................................
FD552866       <-- ..................................................
FD538039       <-- ..................................................
FD976524       <-- ..................................................
FY437052       <-- ..................................................
EV547255       <-- ..................................................
EW739154       <-- ..................................................
EY936490       <-- ..................................................
FD944335       <-- ..................................................
EX908014       <-- ..................................................
FD969402       <-- ..................................................
EX757327       --> GTCACCGGTGCCGGTGGCAGAACAGGGCAAATCGTGTACAAGAAGTTGAA
EY940782       --> ..................................................
FD971718       --> GTCACCGGTGCCGGTGGAAGAACAGGGCAAATCGTGTACAAGAAGTTGAA
FD973291       --> GTCACCGGTGCCGGTGGCAGAACAGGGCAAATCGTGTACAAGAAGTTGAA
EV535078       --> GTCACCGGTGCCGGTGGCAGAACAGGGCAAATCGTGTACAAGAAGTTGAA
EY899849       --> ..................................................
EY940159       --> GTCACCGGTGCCGGTGGAAGAACAGGGCAAATCGTGTACAAGAAGTTGAA
EV536148       --> GTCACCGGTGCCGGTGGCAGAACAGGGCAAATCGTGTACAAGAAGTTGAA
EV547974       --> GTCACCGGTGCCGGTGGCAGAACAGGGCAAATCGTGTACAAGAAGTTGAA
EV551550       --> GTCACCGGTGCCGGTGGAAGAACAGGGCAAATCGTGTACAAGAAGTTGAA
EW733939       --> GTCACCGGTGCCGGTGGAAGAACAGGGCAAATCGTGTACAAGAAGTTGAA
EY898970       --> GTCACCGGTGCCGGTGGAAGAACAGGGCAAATCGTGTACAAGAAGTTGAA
FD541836       --> GTCACCGGTGCCGGTGGCAGAACAGGGCAAATCGTGTACAAGAAGTTGAA
FD948573       --> GTCACCGGTGCCGGTGGAAGAACAGGGCAAATCGTGTACAGGAAGTTGAA
FD973772       --> GTCACCGGTGCCGGTGGCAGAACAGGGTAAATCGTGTACAAGAAGTTGAA
FD980663       --> GTCACCGGTGCCGGTGGCAGAACAGGGCAAATCGTGTACAATAAGTTGAA
EY939500       --> GTCACCGGTGCCGGTGGAAGAACAGGGCAAATCGTGTACAAGAAGTTGAA
EX748220       --> GTCACCTGTGCCGGTGGAAGAACAGGGCAAATCGTGTACAAGAAGTTGAA
EV568291       --> GTCACCGGTGCCGGTGGAAGAACAGGGCAAATCGTGTACAAGAAGTTGAA
EX764517       --> GTCACCGGTGCCGGTGGCAGAACAGGGCAAATCGTGTACAAGAAGTTGAA
FD990242       --> ...................................GTACAAGAAGTTGAA
EX750077       --> ..................................................
EV552321       --> ..................................................
EV566479       --> ..................................................
EX756422       --> ..................................................
EX773109       --> ..................................................

               348    -    398
UN23482        --> GGAGAGGTCGGATCAGTTCGTGGCGAGAGGTTTGGTGAGGACGAAAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546628       <-- GGAGAGGTCGGATCAGTTCTTGGCGAGAGGTTTGGTGAGGACGAAAGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437746       <-- GGAGAGGTCGGATCAGTTCGTGGCGAGAGGTTTGGTGAGGACGAAAGAGA  Raphanus sativus cv GSK3-1
EV539840       <-- GGAGAGGTCGGATCAGTTCGTGGCGAGAGGTTTGGTGAGGACGAAAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543741       <-- GGAGAGGTCGGATCAGTTCGTGGCGAGAGGTTTGGTGAGGACGAAAGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571600       <-- GGAGAGGTCGGATCAGTTCGTGGCGAGAGGTTTGGTGAGGACGAAAGAGA  Raphanus raphanistrum subsp. landra
EX760945       <-- ...agaGTCGGATCAGTTCGTGGCGAGAGGTTTGGTGAGGACGAAAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776960       <-- .............................................gGAGA  Raphanus raphanistrum subsp. landra
EX760235       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540662       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752226       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX753630       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD982513       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV573052       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY895538       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY935962       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD545419       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552866       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD538039       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976524       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437052       <-- ..................................................  Raphanus sativus cv GSK3-1
EV547255       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739154       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY936490       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD944335       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX908014       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD969402       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757327       --> GGAGAGGTCGGATCAGTTCGTGGCGAGAGGTTTGGTGAGGACGAAAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940782       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD971718       --> GGAGAGGTCGGATCAGTTCGTGGCGAGAGGTTTGGTGAGGACGAAAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973291       --> GGAGAGGTCGGATCAGTTCGTGGCGAGAGGTTTGGTGAGGACGAAAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535078       --> GGAGAGGTCGGATCAGTTCGTGGCGAGAGGTTTGGTGAGGACGAAAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899849       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY940159       --> GGAGAGGTCGGATCAGTTCTTGGCGAGAGGTTTGGTGAGGACGAAAGAGA  Raphanus sativus cv Early Scarlet Globe
EV536148       --> GGAGAGGTCGGATCAGTTCGTGGCGAGAGGTTTGGTGAGGACGAAAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547974       --> GGAGAGGTCGGATCAGTTCGTGGCGAGAGGTTTGGTGAGGACGAAAGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV551550       --> GGAGAGGTCGGATCAGTTCTTGGCGAGAGGTTTGGTGAGGACGAAAGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW733939       --> GGAGAGGTCGGATCAGTTCTTGGCGAGAGGTTTGGTGAGGACGAAAGAGA  Raphanus sativus cv Rat-Tail Radish #3870
EY898970       --> GGAGAGGTCGGATCAGTTCGTGGCGAGAGGTTTGGTGAGGACGAAAGAGA  Raphanus raphanistrum subsp. maritimus
FD541836       --> GGAGAGGTCGGATCAGTTCGTGGTGAGAGGTTTGGTGAGGACGAAAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948573       --> GGAGAGGTCGGATCAGTTCTTGGCGAGAGGTTTGGTGAGGACGAAAGAGA  Raphanus sativus cv Early Scarlet Globe
FD973772       --> GGAGAGGTCGGATCAGTTCGTGGCGAGAGGTTTGGTGAGGACGAAAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980663       --> GGAGAGGTCGGATCAGTTTGTGGCGAGAGGTTTGGTGAGGACGAAAGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939500       --> GGAGAGGTCGGATCAGTTCTTGGCGAGAGGTTTGGTGAGGACGAAAGAGA  Raphanus sativus cv Early Scarlet Globe
EX748220       --> GGAGAGGTCGGATCAGTTCGTGGCGAGAGGTTTGGTGAGGACGAAAGAGA  Raphanus raphanistrum subsp. maritimus
EV568291       --> GGAGAGGTCGGATCAGTTCTTGGCGAGAGGTTTGGTGAGGACGAAAGAGA  Raphanus raphanistrum subsp. landra
EX764517       --> GGAGAGGTCGGATCAGTTCGTGGCGAGAGGTTTGGTGAGGACGAAAGATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD990242       --> GGAGAGGTCGGATCAGTTCGTGGCGAGAGGTTTGGTGAGGACGAAAGAGA  Raphanus raphanistrum subsp. landra
EX750077       --> ..AGAGGTCGGATCAGTTCGTGGCGAGAGGTTTGGTGAGGACGAAAGAGA  Raphanus raphanistrum subsp. maritimus
EV552321       --> ..gGAGGTCGGATCAGTTCTTGGCGAGAGGTTTGGTGAGGACGAAAGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566479       --> ...............GTTCGTGGCGAGAGGTTTGGTGAGGACGAAAGAGA  Raphanus raphanistrum subsp. landra
EX756422       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773109       --> ..................................................  Raphanus raphanistrum subsp. landra

               398    -    448
UN23482        --> GCAAGGAGAAGATCGGTGGAGAGGAGGAAGTGTTCGTTGGAGACATTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546628       <-- GCAAGGAGAAGATCGGTGGAGAGGAGGAAGTGTTCGTCGGAGATATTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437746       <-- GCAAGGAGAAGATCGGTGGAGAGGAGGAAGTGTTCGTCGGAGATATTCGA  Raphanus sativus cv GSK3-1
EV539840       <-- GCAAGGAGAAGATCGGTGGAGAGGAGGAAGTGTTCGTTGGAGACATTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543741       <-- GCAAGGAGAAGATCGGTGGAGAGGAGGAAGTGTTCGTTGGAGACATTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571600       <-- GCAAGGAGAAGATCGGTGGAGAGGAGGAAGTGTTCGTTGGAGACATTCGA  Raphanus raphanistrum subsp. landra
EX760945       <-- GCAAGGAGAAGATCGGTGGAGAGGAGGAAGTGTTCGTTGGAGACATTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776960       <-- GCAAG-AGAAGATCGGTGGAGAGGAGGAAGTGTTCGTTGGAGACATTCGA  Raphanus raphanistrum subsp. landra
EX760235       <-- ........................AGGAAGTGTTCGT-GGAGGCATTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540662       <-- ........................................AGACATTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752226       <-- ..........................................ACATTCGA  Raphanus raphanistrum subsp. maritimus
EX753630       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD982513       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV573052       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY895538       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY935962       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD545419       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552866       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD538039       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976524       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437052       <-- ..................................................  Raphanus sativus cv GSK3-1
EV547255       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739154       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY936490       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD944335       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX908014       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD969402       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757327       --> GCAAGGAGAAGATCGGTGGAGAGGAGGAAGTGTTCGTTGGAGACATTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940782       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD971718       --> GCAAGGAGAAGATCGGTGGAGAGGAGGAAGTGTTCGTTGGAGACATTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973291       --> GCAAGGAGAAGATCGGTGGAGAGGAGGAAGTGTTCGTTGGAGACATTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535078       --> GCAAGGAGAAGATCGGTGGAGAGGAGGAAGTGTTCGTTGGAGACATTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899849       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY940159       --> GCAAGGAGAAGATCGGTGGAGAGGAGGAAGTGTTCGTCGGAGATATTCGA  Raphanus sativus cv Early Scarlet Globe
EV536148       --> GCAAGGAGAAGATCGGTGGAGAGGAGGAAGTGTTCGTTGGAGACATTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547974       --> GCAAGGAGAAGATCGGTGGAGAGGAGGAAGTGTTCGTTGGAGACATTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV551550       --> GCAAGGAGAAGATCGGTGGAGAGGAGGAAGTGTTCGTCGGAGATATTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW733939       --> GCAAGGAGAAGATCGGTGGAGAGGAGGAAGTGTTCGTCGGAGATATTCGA  Raphanus sativus cv Rat-Tail Radish #3870
EY898970       --> GCAAGGAGAAGATCGGTGGAGAGGAGGAAGTGTTCGTTGGAGACATTCGA  Raphanus raphanistrum subsp. maritimus
FD541836       --> GCAAGGAGAAGATCGGTGGAGAGGAGGAAGTGTTCGTTGGAGACATTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948573       --> GCAAGGAGAAGATCGGTGGAGAGGAGGAA.....................  Raphanus sativus cv Early Scarlet Globe
FD973772       --> GCAAGGAGAAGATCGGTGGAGAGGAGGAAGTGTTCGTTGGAGACATTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980663       --> GCAAGGAGAAGATCGGTGGAGAGGAGGAAGTGTTCGTTGGAGACATCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939500       --> GCAAGGAGAAGATCGGTGGAGAGGAGGAAGTGTTCGTCGGAGATATTCGA  Raphanus sativus cv Early Scarlet Globe
EX748220       --> GCAAGGAGAAGATCGGTGGAGAGGAGGAAGTGTTCGTTGGAGACATTCGA  Raphanus raphanistrum subsp. maritimus
EV568291       --> GCAAGGAGAAGATCGGTGGAGAGGAGGAAGTGTTCGTCGGAGATATTCGA  Raphanus raphanistrum subsp. landra
EX764517       --> GCAAGGAGAAGATCGGTGGAGAGGAGGAAGTGTTCGTTGGAGACATTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD990242       --> GCAAGGAGAAGATCGGTGGAGAGGAGGAAGTGTTCGTCGGAGACATTCGA  Raphanus raphanistrum subsp. landra
EX750077       --> GCAAGGAGAAGATCGGTGGAGAGGAGGAAGTGTTCGTCGGAGATATTCGA  Raphanus raphanistrum subsp. maritimus
EV552321       --> GCAAGGAGAAGATCGGTGGAGAGGAGGAAGTGTTCGTCGGAGATATTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566479       --> GCAAGGAGAAGATCGGTGGAGAGGAGGAAGTGTTCGTTGGAGACATTCGA  Raphanus raphanistrum subsp. landra
EX756422       --> ...............GTGGAGAGGAGGAAGTGTTCGTTGGAGGCATTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773109       --> ..................................................  Raphanus raphanistrum subsp. landra

               448    -    498
UN23482        --> GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546628       <-- GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
FY437746       <-- GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
EV539840       <-- GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
EV543741       <-- GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
EV571600       <-- GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
EX760945       <-- GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
EX776960       <-- GACCTTGAAGCCATTGCTCCTGCTGTTCGAGGGATTGATGCTTTGGTCAT
EX760235       <-- GAC-TTGAAGCCATTGCTC-TGCTGTTCAAGGGATTGATGCTTTGGTCAT
EV540662       <-- GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
EX752226       <-- GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
EX753630       <-- .......AAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
FD982513       <-- ........AGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
EV573052       <-- .......................TGTTCAAGGGATTGATGCTTTGGTCAT
EY895538       <-- .......................TGTTCAAGGGATTGATGCTTTGGTCAT
EY935962       <-- .......................TGTTCAAGGGATTGATGCTTTGGTCAT
FD545419       <-- ........................GTTCAAGGGATTGATGCTTTGGTCAT
FD552866       <-- ........................GTTCAAGGGATTGATGCTTTGGTCAT
FD538039       <-- ............................AAGGGATTGATGCTTTGGTCAT
FD976524       <-- ...................................TGATGCTTTGGTCAT
FY437052       <-- ..................................................
EV547255       <-- ..................................................
EW739154       <-- ..................................................
EY936490       <-- ..................................................
FD944335       <-- ..................................................
EX908014       <-- ..................................................
FD969402       <-- ..................................................
EX757327       --> GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
EY940782       --> ..................................................
FD971718       --> GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
FD973291       --> GACCTTGAAGCCATTGCTCCTGCTGTTCAAGG-ATTGATGCTTTGGTCAT
EV535078       --> GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
EY899849       --> ..................................................
EY940159       --> GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
EV536148       --> GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
EV547974       --> GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
EV551550       --> GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
EW733939       --> GACCTTGAAGCCCTTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
EY898970       --> GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
FD541836       --> GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
FD948573       --> ..................................................
FD973772       --> GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
FD980663       --> GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
EY939500       --> GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
EX748220       --> GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
EV568291       --> GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
EX764517       --> GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
FD990242       --> GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
EX750077       --> GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
EV552321       --> GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
EV566479       --> GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
EX756422       --> GACCTTGAAGCCATTGCTCCTGCTGTTCAAGGGATTGATGCTTTGGTCAT
EX773109       --> ......................CTGTTCGAGGGATTGATGCTTTGGTCAT

               498    -    548
UN23482        --> TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546628       <-- TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
FY437746       <-- TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
EV539840       <-- TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
EV543741       <-- TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGACCCTAGCAAAG
EV571600       <-- TCTTACGAGCGCTGTCCCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
EX760945       <-- TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
EX776960       <-- TCTTACGAGCGCTGTCCCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
EX760235       <-- TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
EV540662       <-- TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
EX752226       <-- TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
EX753630       <-- TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
FD982513       <-- TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
EV573052       <-- TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
EY895538       <-- TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
EY935962       <-- TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
FD545419       <-- TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGACCCTAGCAAAG
FD552866       <-- TCTTACAAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
FD538039       <-- TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
FD976524       <-- TCTTACGAGCGCTGTACCGAAGATGAAGCCTGGTTTTGATCCTAGCAAAG
FY437052       <-- .....gGAGCGCTG-ACCGAAGATGAA-CCTGGTTTTGATCCTAGCAAAG
EV547255       <-- ..................................................
EW739154       <-- ..................................................
EY936490       <-- ..................................................
FD944335       <-- ..................................................
EX908014       <-- ..................................................
FD969402       <-- ..................................................
EX757327       --> TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
EY940782       --> ..................................................
FD971718       --> TCTTACGAGCGCTGTACCGAAGATGAA-CCTGGTTTTGATCCTAGCAAAG
FD973291       --> TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
EV535078       --> TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
EY899849       --> ..................................................
EY940159       --> TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
EV536148       --> TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
EV547974       --> TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGACCCTAGCAAAG
EV551550       --> TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
EW733939       --> TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCC........
EY898970       --> TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
FD541836       --> TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
FD948573       --> ..................................................
FD973772       --> TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
FD980663       --> TCTTACGAGCGCTGTACCGAAGATGAAGCCTGGTTTTGATCCTAGCAAAG
EY939500       --> TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
EX748220       --> TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
EV568291       --> TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
EX764517       --> TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGACCCTAGCAAAG
FD990242       --> TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
EX750077       --> TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
EV552321       --> TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
EV566479       --> TCTTACGAGCGCTGTCCCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
EX756422       --> TCTTACGAGCGCTGTACCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG
EX773109       --> TCTTACGAGCGCTGTCCCGAAGATGAAACCTGGTTTTGATCCTAGCAAAG

               548    -    598
UN23482        --> GAGAGAGACCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546628       <-- GAGAGAGACCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
FY437746       <-- GAGAGAGACCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
EV539840       <-- GAGAGAGGCCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
EV543741       <-- GAGAGAGACCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
EV571600       <-- GAGAGAGGCCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
EX760945       <-- GAGAGAGGCCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
EX776960       <-- GAGAGAGGCCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
EX760235       <-- GAGAGAGGCCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
EV540662       <-- GAGAGAGGCCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
EX752226       <-- GAGAGAGACCTGAGTTCTACTTTGAAGATGGAGCTTATCCTGAACAGGTT
EX753630       <-- GAGAGAGACCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
FD982513       <-- GAGAGAGGCCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
EV573052       <-- GAGAGAGACCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
EY895538       <-- GAGAGAGACCTGAGTTTTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
EY935962       <-- GAGAGAGACCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
FD545419       <-- GAGAGAGACCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
FD552866       <-- GAGAGAGACCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
FD538039       <-- GAGAGAGGCCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
FD976524       <-- GAGAGAGACCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
FY437052       <-- GAGAGAGACCTGAGT-CTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
EV547255       <-- ..................................TTATCCTGAACAGGTT
EW739154       <-- ......................................CCTGAACAGGTT
EY936490       <-- .......................................CTGAACAGGTT
FD944335       <-- ..................................................
EX908014       <-- ..................................................
FD969402       <-- ..................................................
EX757327       --> GAGAGAGGCCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
EY940782       --> ..................................................
FD971718       --> GAGAGAGACCTGAGTTCTACTTTGAAGAAAGAGCTTATCCTGAACAGGTT
FD973291       --> GAGAGAGGCCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
EV535078       --> GAGAGAGGCCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
EY899849       --> ..................................................
EY940159       --> GAGAGAGACCTGAGTTCTACTTTGAAGAAG-AGCTTATCCTGAACAGGTT
EV536148       --> GAGAGAGGCCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
EV547974       --> GAGAGAGACCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
EV551550       --> GAGAGAGACCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
EW733939       --> ..................................................
EY898970       --> GAGAGAGACCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
FD541836       --> GAGAGAGGCCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
FD948573       --> ..................................................
FD973772       --> GAGAGAGGCCTGAGTTCTACTTTGA.........................
FD980663       --> GAGAGAGACCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
EY939500       --> GAGAGAGACCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
EX748220       --> GAGAGAGACCTGAGTTCTACTTTGAAGATGGAGCTTATCCTGAACAGGTT
EV568291       --> GAGAGAGACCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
EX764517       --> GAGAGAGACCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
FD990242       --> GAGAGAGGCCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
EX750077       --> GAGAGAGACCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
EV552321       --> GAGAGAGACCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
EV566479       --> GAGAGAGGCCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
EX756422       --> GAGAGAGGCCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT
EX773109       --> GAGAGAGGCCTGAGTTCTACTTTGAAGAAGGAGCTTATCCTGAACAGGTT

               598    -    648
UN23482        --> GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546628       <-- GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
FY437746       <-- GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
EV539840       <-- GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
EV543741       <-- GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
EV571600       <-- GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
EX760945       <-- GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
EX776960       <-- GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
EX760235       <-- GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
EV540662       <-- GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
EX752226       <-- GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
EX753630       <-- GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
FD982513       <-- GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
EV573052       <-- GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
EY895538       <-- GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
EY935962       <-- GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
FD545419       <-- GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
FD552866       <-- GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
FD538039       <-- GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
FD976524       <-- GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
FY437052       <-- GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
EV547255       <-- GATTGGATTGGCCAGAAGAATCAGATAGATG-CCGTTAAGGCAGCTGGAG
EW739154       <-- GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
EY936490       <-- GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
FD944335       <-- ..................................................
EX908014       <-- ..................................................
FD969402       <-- ..................................................
EX757327       --> GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAAGCAGCTGGAG
EY940782       --> ..................................................
FD971718       --> GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAG-CAGCTGGAG
FD973291       --> GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAAGCAGCTGGAG
EV535078       --> GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGC..............
EY899849       --> ..................................................
EY940159       --> GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAG-CAGCTGGAG
EV536148       --> GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
EV547974       --> GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
EV551550       --> GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
EW733939       --> ..................................................
EY898970       --> GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
FD541836       --> GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
FD948573       --> ..................................................
FD973772       --> ..................................................
FD980663       --> GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
EY939500       --> GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAAGCGGCTGGAG
EX748220       --> GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAG-CAGCTGGAG
EV568291       --> GATTGGATTGGTCAGAAGAATCAGATAGATGTCCGCTAAGGCAGCTGGAG
EX764517       --> GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
FD990242       --> GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
EX750077       --> GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
EV552321       --> GATTGGATTGGCCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
EV566479       --> GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
EX756422       --> GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG
EX773109       --> GATTGGATTGGTCAGAAGAATCAGATAGATG-CCGCTAAGGCAGCTGGAG

               648    -    698
UN23482        --> TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546628       <-- TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
FY437746       <-- TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
EV539840       <-- TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
EV543741       <-- TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
EV571600       <-- TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
EX760945       <-- TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
EX776960       <-- TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
EX760235       <-- TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
EV540662       <-- TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
EX752226       <-- TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
EX753630       <-- TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
FD982513       <-- TTAAGCAGATTGTTTTGGTAGGG-TCGATGGGAGGAACAAACATAAACAA
EV573052       <-- TTAAGCAGATTGTTT-GGTCGGG-TCGATGGGAGGAACAAACATAAACAA
EY895538       <-- TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
EY935962       <-- TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
FD545419       <-- TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
FD552866       <-- TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
FD538039       <-- TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
FD976524       <-- TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
FY437052       <-- TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
EV547255       <-- TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
EW739154       <-- TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
EY936490       <-- TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
FD944335       <-- ..................................GAACAAACATAAACAA
EX908014       <-- ..................................................
FD969402       <-- ..................................................
EX757327       --> TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
EY940782       --> ..................................................
FD971718       --> TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGG...............
FD973291       --> TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
EV535078       --> ..................................................
EY899849       --> ..................................................
EY940159       --> TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGA-CAAACATAAACAA
EV536148       --> TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
EV547974       --> TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
EV551550       --> TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
EW733939       --> ..................................................
EY898970       --> TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACGTAAACAA
FD541836       --> TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
FD948573       --> ..................................................
FD973772       --> ..................................................
FD980663       --> TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
EY939500       --> TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
EX748220       --> TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACA-
EV568291       --> TTAAGCAGATTGTTT-GGTCGGG-TCGATGGGAGGAACAAACATAAACAA
EX764517       --> TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
FD990242       --> TTAAGCAGATTGTTTTGGTAGGG-TCGATGGGAGGAACAAACATAAACAA
EX750077       --> TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
EV552321       --> TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
EV566479       --> TTAAGCAGATTGTTTTGGTCGGGGTCGATGGGAGGAACAAACATAAACAA
EX756422       --> TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA
EX773109       --> TTAAGCAGATTGTTTTGGTCGGG-TCGATGGGAGGAACAAACATAAACAA

               698    -    748
UN23482        --> CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGAAG-AGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546628       <-- CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGAAG-AGGA
FY437746       <-- CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGAAG-AGGA
EV539840       <-- CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGAAG-AGGA
EV543741       <-- CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGAAG-AGGA
EV571600       <-- CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGAAG-AGGA
EX760945       <-- CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGAAG-AGGA
EX776960       <-- CCCC-TTGAATAGCATTGGCAATGCCAACATTTTGGTTT-GGAAG-AGGA
EX760235       <-- CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGAAG-AGGA
EV540662       <-- CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGAAG-AGGA
EX752226       <-- CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGAAG-AGGA
EX753630       <-- CCCC-TTGAATAGCATTGGCAATGCCAACATTTTGGTTT-GGAAG-AGGA
FD982513       <-- CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGAAG-AGGA
EV573052       <-- CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGAAG-AGGA
EY895538       <-- CCCC-TTGAATAGCATTGGCAATGCCAACATTTTGGTTT-GGAAG-AGGA
EY935962       <-- CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGAAG-AGGA
FD545419       <-- CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGAAG-AGGA
FD552866       <-- CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGAAG-AGGA
FD538039       <-- CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGAAG-AGGA
FD976524       <-- CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGAAG-AGGA
FY437052       <-- CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGAAG-AGGA
EV547255       <-- CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGAAG-AGGA
EW739154       <-- CCCC-TTGAATAGCATTGGCAATGCCAACATTTTGGTTT-GGAAG-AGGA
EY936490       <-- CCCC-TTGAATAGCATTGGCAATGCCAACACTCTGGTTT-GGAAG-AGGA
FD944335       <-- CCCC-TTGAATAGCATTGGCAATGCCAACATTTTGGTTT-GGAAG-AGGA
EX908014       <-- ..................................................
FD969402       <-- ..................................................
EX757327       --> CCCC-TTGAta.......................................
EY940782       --> ..................................................
FD971718       --> ..................................................
FD973291       --> CCCC-TTGAATAGCATTGG...............................
EV535078       --> ..................................................
EY899849       --> ..................................................
EY940159       --> CCCC-TTGA-TAGCATTGGCA-TGCCAACATTCTGGTTT-GGAgaga...
EV536148       --> CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGA.......
EV547974       --> CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGAAG-AGGA
EV551550       --> CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGAAG-AGGA
EW733939       --> ..................................................
EY898970       --> CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGA-G-A-GA
FD541836       --> CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGA-G-A-GA
FD948573       --> ..................................................
FD973772       --> ..................................................
FD980663       --> CCCC-TTGAATAGCATTGGCA-TGCCAACATTCTGGTTT-GGA-G-A-GA
EY939500       --> CCCC-TTGAATAGCATTGGCAATGCCA-CATTCTGGT.............
EX748220       --> CCCC-TTGAATA......................................
EV568291       --> CCCCCTTGAATAGCATTGGCAATGCCAACATTCTGGTTTTGGAAG-AGGA
EX764517       --> CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGAAG-AGGA
FD990242       --> CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGAAG-AGGA
EX750077       --> CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGAAG-AGGA
EV552321       --> CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGAAG-AGGA
EV566479       --> CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGAAG-AGGA
EX756422       --> CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGAAG-AGGA
EX773109       --> CCCC-TTGAATAGCATTGGCAATGCCAACATTCTGGTTT-GGAAGTAGGA

               748    -    798
UN23482        --> AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCATACACCATCATCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546628       <-- AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCATACACCATCATCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437746       <-- AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCATACACCATCATCAG  Raphanus sativus cv GSK3-1
EV539840       <-- AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCGTACACCATCATCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543741       <-- AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCATACACCATCATCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571600       <-- AAGCTGAGCTGTACTT-GGCTGACTCCGGTATTCCATACACCATCATCAG  Raphanus raphanistrum subsp. landra
EX760945       <-- AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCGTACACCATCATCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776960       <-- AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCATACACCATCATCAG  Raphanus raphanistrum subsp. landra
EX760235       <-- AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCGTACACCATCATCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540662       <-- AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCGTACACCATCATCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752226       <-- AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCATACACCATCATCAG  Raphanus raphanistrum subsp. maritimus
EX753630       <-- AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCATACACCATCATCAG  Raphanus raphanistrum subsp. maritimus
FD982513       <-- AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCATACACCATCATCAG  Raphanus raphanistrum subsp. landra
EV573052       <-- AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCATACACCATCATCAG  Raphanus raphanistrum subsp. landra
EY895538       <-- AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCATACACCATCATCAG  Raphanus raphanistrum subsp. maritimus
EY935962       <-- AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCATACACCATCATCAG  Raphanus sativus cv Early Scarlet Globe
FD545419       <-- AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCATACACCATCATCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552866       <-- AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCATACACCATCATCAG  Raphanus raphanistrum subsp. landra
FD538039       <-- AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCGTACACCATCATCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976524       <-- AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCATACACCATCATCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437052       <-- AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCATACACCATCATCAG  Raphanus sativus cv GSK3-1
EV547255       <-- AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCATACACCATCATCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739154       <-- AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCATACACCATCATCAG  Raphanus sativus cv Rat-Tail Radish #3870
EY936490       <-- AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCATACACCATCATCAG  Raphanus sativus cv Early Scarlet Globe
FD944335       <-- AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCATACACCATCATCAG  Raphanus sativus cv Early Scarlet Globe
EX908014       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD969402       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757327       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940782       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD971718       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973291       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535078       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899849       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY940159       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV536148       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547974       --> AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCATACACCATC.....  Raphanus raphanistrum subsp. raphanistrum (NY)
EV551550       --> AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCATACACCATCATCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW733939       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY898970       --> AAGCTGAGCAGTACTT-GGCTGACTCCG-TATTC-ATACACatca.....  Raphanus raphanistrum subsp. maritimus
FD541836       --> AAGCTGAGCAGTACTT-GGCTGACTCCGGTAT-CCGTACAC-ATCATCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948573       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD973772       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980663       --> AAGCTGAGCAGTACTT-GGCTG............................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939500       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX748220       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV568291       --> AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCATACACCATCATCAG  Raphanus raphanistrum subsp. landra
EX764517       --> AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCATACACCATCATCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD990242       --> AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCATACACCATCATCAG  Raphanus raphanistrum subsp. landra
EX750077       --> AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCATACACCATCATCAG  Raphanus raphanistrum subsp. maritimus
EV552321       --> AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCATACACCATCATCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566479       --> AAGCTGAGCTGTACTT-GGCTGACTCCGGTATTCCATACACCATC.....  Raphanus raphanistrum subsp. landra
EX756422       --> AAGCTGAGCAGTACTT-GGCTGACTCCGGTATTCCGTACACCATCATCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773109       --> AAGCTGAACAGTACTTTGGCTGACTCCGGTATTCCATACACCATCATCAG  Raphanus raphanistrum subsp. landra

               798    -    848
UN23482        --> GG-CGGGTGGTCTGCAGGACAAGGAAGGTGGCATCCGGGAACTAATT-GT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546628       <-- GG-CGGGTGGTCTGCAGGACAAGGAAGGTGGCATCCGGGAACTAATT-GT
FY437746       <-- GG-CGGGTGGTCTGCAGGACAAGGAAGGTGGCATCCGGGAACTAATT-GT
EV539840       <-- GG-CGGGTGGTCTGCAGGACAAGGAAGGTGGCATCCGGGAACTAATT-GT
EV543741       <-- GG-CGGGTGGTCTGCAGGACAAGGAAGGTGGCATCCGGGAACTAATT-GT
EV571600       <-- GG-CGGGTGGCCTGCAGGACAAGGAAGGTGGCATCCGGGAACTAATT-GT
EX760945       <-- GG-CGGGTGGTCTGCAGGACAAGGAAGGTGGCATTCGGGAACTAATT-GT
EX776960       <-- GG-CGGGTGGTTTGCAGGACAAGGAAGGTGGCATCCGGGAACTAATT-GT
EX760235       <-- GG-CGGGTGGTCTGCAGGACAAGGAAGGTGGCATCCGGGAACTAATT-GT
EV540662       <-- GG-CGGGTGGTCTGCAGGACAAGGAAGGTGGCATCCGGGAACTAATT-GT
EX752226       <-- GG-CGGGTGGTCTGCAGGACAAGGAAGGTGGCATCCGGGAACTAATT-GT
EX753630       <-- GG-CGGGTGGTTTGCAGGACAAGGAAGGTGGCATCCGGGAACTAATT-GT
FD982513       <-- GG-CGGGTGGTCTGCAGGACAAGGAAGGTGGCATCCGGGAACTAATT-GT
EV573052       <-- GG-CGGGTGGTCTGCAGGACAAGGAAGGTGGCATCCGGGAACTAATT-GT
EY895538       <-- GG-CGGGTGGTTTGCAGGACAAGGAAGGTGGCATCCGGGAACTAATT-GT
EY935962       <-- GG-CGGGTGGTCTGCAGGACAAGGGAGGTGGCATCCGGGAACTAATT-GT
FD545419       <-- GG-CGGGTGGTCTGCAGGACAAGGAAGGTGGCATCCGGGAACTAATT-GT
FD552866       <-- GG-CGGGTGGTCTGCAGGACAAGGAAGGTGGCATCCGGGAACTAATT-GT
FD538039       <-- GG-CGGGTGGTCTGCAGGACAAGGAAGGTGGCATCCGGGAACTAATT-GT
FD976524       <-- GG-CGGGTGGTCTGCAGGACAAGTAAGGTGGCATCCGGGAACTAATT-GT
FY437052       <-- GG-CGGGTGGTCTGCAGGACAAGGAAGGTGGCATCCGGGAACTAATT-GT
EV547255       <-- GG-CGGGTGGTCTGCAGGACAAGGAAGGTGGCATCCGGGAACTAATT-GT
EW739154       <-- GG-CGGGTGGTTTGCAGGACAAGGAAGGTGGCATCCGGGAACTAATT-GT
EY936490       <-- GG-CGGGTGGTCTGCAGGACAAGGAAGGTGGCATCCGGGAACTAATT-GT
FD944335       <-- GG-GGGGTGGTTTGCAGGACAAGGAAGGTGGCATCCGGGAACTAATT-GT
EX908014       <-- .............GCAGGACAAGGAAGGTGGCATCCGGGAAATAATT-GT
FD969402       <-- .......................................AACTAATT-GT
EX757327       --> ..................................................
EY940782       --> ..................................................
FD971718       --> ..................................................
FD973291       --> ..................................................
EV535078       --> ..................................................
EY899849       --> ..................................................
EY940159       --> ..................................................
EV536148       --> ..................................................
EV547974       --> ..................................................
EV551550       --> GG................................................
EW733939       --> ..................................................
EY898970       --> ..................................................
FD541836       --> G--CGGGTGGTCTGCAG-ACAAGGAAG-TGGCATCCGGGA-CTAATT-GT
FD948573       --> ..................................................
FD973772       --> ..................................................
FD980663       --> ..................................................
EY939500       --> ..................................................
EX748220       --> ..................................................
EV568291       --> GG-CGGGTGGTCTGCAGaca..............................
EX764517       --> GG-CGGGTGGTCTGCAGGACAAGGAAGGTGGCATCCGGGAACTAATT-GT
FD990242       --> GG-CGGGTGGTCTGCAGGACAAGGAAGGTGGCATCCGGGAACTAATT-GT
EX750077       --> GG-CGGGTGGTCTGCAGGACAAGGAAGGTGGCATCCGGGAACTAATT-GT
EV552321       --> GG-CGGGTGGTCTGCAGGACAAGGAAGGTGGCATCCGGGAACTAATT-GT
EV566479       --> ..................................................
EX756422       --> GGGCGGGTGGTCT.....................................
EX773109       --> GG-CGGGTGGTCTGCAGGACAAGGAAGGTGGCATCCGGGAACTAATTTGT

               848    -    898
UN23482        --> GGGAAAAGATGACGAGATTCTTGAGACAGAGACGAGAACAATAGCAAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546628       <-- GGGGAAAGATGACGAGATCCTTGAGACAGAGACGAGAACAATAGCAAGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437746       <-- GGGAAAAGATGACGAGATTCTTGAGACAGAGACGAGAACAATAGCAAGGG  Raphanus sativus cv GSK3-1
EV539840       <-- GGGAAAAGATGACGAGATTCTCGAGACGGAGACGAGAACAATAGCAAGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543741       <-- GGGAAAAGATGACGAGATTCTTGAGACAGAGACGAGAACAATAGCAAGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571600       <-- GGGAAAAGATGACGAGATTCTTGAGACAGAGACGAGAATAATAGCAAGGG  Raphanus raphanistrum subsp. landra
EX760945       <-- GGGAAAAGATGACGAGATTCTCGAGACGGAGACGAGAACAATAGCAAGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776960       <-- GGGAAAAGATGACGAGATTCTTGAGACAGAGACGAGAACAATAGCAAGGG  Raphanus raphanistrum subsp. landra
EX760235       <-- GGGAAAAGATGACGAGATTCTCGAGACGGAGACGAGAACAATAGCAAGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540662       <-- GGGAAAAGATGACGAGATTCTCGAGACGGAGACGAGAACAATAGCAAGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752226       <-- GGGAAAAGATGACGAGATTCTTGAGACAGAGACGAGAACAATAGCAAGGG  Raphanus raphanistrum subsp. maritimus
EX753630       <-- GGGGAAAGATGACGAGATTCTTGAGACAGAGACGAGAACAATAGCAAGGG  Raphanus raphanistrum subsp. maritimus
FD982513       <-- GGGAAAAGATGACGATATTCTTGAGACAGAGACGAGAACAATAGCAAGGG  Raphanus raphanistrum subsp. landra
EV573052       <-- GGGAAAAGATGACGAGATTCTTGAGACAGAGACGAGAACAATAGCAAGGG  Raphanus raphanistrum subsp. landra
EY895538       <-- GGGGAAAGATGACGAGATTCTTGAGACAGAGACGAGAACAATAGCAAGGG  Raphanus raphanistrum subsp. maritimus
EY935962       <-- GGGGAAAGATGACGAGATTCTTGAGACAGAGACGAGAACAATAGCAAGGG  Raphanus sativus cv Early Scarlet Globe
FD545419       <-- GGGAAAAGATGACGAGATTCTTGAGACAGAGACGAGAACAATAGCAAGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552866       <-- GGGAAAAGATGACGAGATTCTTGAGACAGAGACGAGAACAATAGCAAGGG  Raphanus raphanistrum subsp. landra
FD538039       <-- GGGAAAAGATGACGAGATTCTCGAGACGGAGACGAGAACAATAGCAAGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976524       <-- GGGAAAAGATGACGAGATTCTTGAGACAGAGACGAGAACAATAGCAAGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437052       <-- GGGAAAAGATGACGAGATTCTTGAGACAGAGACGAGAACAATAGCAAGGG  Raphanus sativus cv GSK3-1
EV547255       <-- GGGGAAAGATGACGAGATTCTTGAGACAGAGACGAGAACAATAGCAAGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739154       <-- GGGGAAAGATGACGAGATTTTTGAGACAGAGACGAGAACAATAGCAAGGG  Raphanus sativus cv Rat-Tail Radish #3870
EY936490       <-- GGGGAAAGATGACGAGATTCTTGAGACAGAGACGAGAACAATAGCAAGGG  Raphanus sativus cv Early Scarlet Globe
FD944335       <-- GGGGAAAGATGACGAGATTTTTGAGACAGAGACGAGAACAATAGCAAGGG  Raphanus sativus cv Early Scarlet Globe
EX908014       <-- GGGAAAAGAAGACGAGATTCTTGAGACAGAGACGAGAACAATAGCAAGGG  Raphanus sativus cv Rat-Tail Radish #3870
FD969402       <-- GGGAAAAGATGACGAGATTCTCGAGACGGAGACGAGAACAATAGCAAGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757327       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940782       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD971718       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973291       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535078       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899849       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY940159       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV536148       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547974       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV551550       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW733939       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY898970       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD541836       --> GGGAAAAGATGACGA...................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948573       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD973772       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980663       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939500       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX748220       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV568291       --> ..................................................  Raphanus raphanistrum subsp. landra
EX764517       --> GGGAAAAGATGACGAGATTCTTGAGACAGAGACGAGAACAATAGCAAGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD990242       --> GGGAAAAGATGACGAGATTCTTGAGACAGAGACGAGAACAGTAGCAAGGG  Raphanus raphanistrum subsp. landra
EX750077       --> GGGGAAAGATGACGAGATTCTTGAGACAGAGACGAGAACAATAGCAAGGG  Raphanus raphanistrum subsp. maritimus
EV552321       --> GGGGAAAGATGACGAGATTCTTGAGACAGAGACGAGAACAATAGCAAGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566479       --> ..................................................  Raphanus raphanistrum subsp. landra
EX756422       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773109       --> GGGAAAAGATGACGAGATTCTTGAGACAGAGACGAGAACAATAGCAAGGG  Raphanus raphanistrum subsp. landra

               898    -    948
UN23482        --> CTGATGTTGCAGAAGTCTGCGTTCAGGCGTTGCAGCTCGAGGAGGCAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546628       <-- CTGATGTTGCAACAGTCTGCGTTCAGGCGTTGCAGCTCGAGGAGTCAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437746       <-- CTGATGTTGCAGAAGTCTGCGTTCAGGCGTTGCAGCTCGAGGAGGCAAAG  Raphanus sativus cv GSK3-1
EV539840       <-- CTGATGTTGCAGAAGTCTGCGTTCAGGCGTTGCAGCTCGAGGAGGCAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543741       <-- CTGATGTTGCAGAAGTCTGCGTTCAGGCGTTGCAGCTCGAGGAGGCAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571600       <-- CTGATGTTGCAGAAGTCTGCGTTCAGGCGTTGCAGCTCGAGGAGGCAAAG  Raphanus raphanistrum subsp. landra
EX760945       <-- CTGATGTTGCAGAAGTCTGCGTTCAGGCGTTGCAGCTCGAGGAGGCAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776960       <-- CTGATGTTGCAGAAGTTTGCGTTCAGGCGTTGCAGCTCGAGGAGGCAAAG  Raphanus raphanistrum subsp. landra
EX760235       <-- CTGATGTTGCAGAAGTCTGCGTTCAGGCGTTGCAGCTCGAGGAGGCAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540662       <-- CTGATGTTGCAGAAGTCTGTGTTCAGGCGTTGCAGCTCGAGGAGGCAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752226       <-- CTGATGTTGCAGAAGTCTGCGTTCAGGCGTTGCAGCTCGAGGAGGCAAAG  Raphanus raphanistrum subsp. maritimus
EX753630       <-- CTGATGTTGCAGAAGTTTGCGTTCAGGCGTTGCAGCTCGAGGAGGCAAAG  Raphanus raphanistrum subsp. maritimus
FD982513       <-- CTGATGTTGCAGAAGTCTGCGTTCAGGCGTTGCAGCTCGAGGAGGCAAAG  Raphanus raphanistrum subsp. landra
EV573052       <-- CTGATGTTGCAGAAGTCTGCGTTCAGGCGTTGCAGCTCGAGGAGGCAAAG  Raphanus raphanistrum subsp. landra
EY895538       <-- CTGATGTTGCAGAAGTTTGCGTTCAGGCTTTGCAGCTCGAGGAGGCAAAG  Raphanus raphanistrum subsp. maritimus
EY935962       <-- CTGATGTTGCAGAAGTCTGCGTTCAGGCGTTGCAGCTCGAGGAGTCAAAG  Raphanus sativus cv Early Scarlet Globe
FD545419       <-- CTGATGTTGCAGAAGTCTGCGTTCAGGCGTTGCAGCTCGAGGAGGCAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552866       <-- CTGATGTTGCAGAAGTCTGCGTTCAGGCGTTGCAGCTCGAGGAGGCAAAG  Raphanus raphanistrum subsp. landra
FD538039       <-- CTGATGTTGCAGAAGTCTGCGTTCAGGCGTTGCAGCTCGAGGAGGCAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976524       <-- CTGATGTTGCAGAAGTCTGCGTTCAGGCGTTGCAGCTCGAGGAGGCAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437052       <-- CTGATGTTGCAGAAGTCTGCGTTCAGGCGTTGCAGCTCGAGGAGGCAAAG  Raphanus sativus cv GSK3-1
EV547255       <-- CTGATGTTGCAGAAGTCTGCGTTCAGGCGTTGCAGCTCGAGGAGTCAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739154       <-- CTGATGTTGCAGAAGTTTGCGTTCAGGGGTTGCAGCTCGGGGAGTCAAAG  Raphanus sativus cv Rat-Tail Radish #3870
EY936490       <-- CTGATGTTGCAGAAGTCTGCGTTCAGGCGTTGCAGCTCGAGGAGTCAAAG  Raphanus sativus cv Early Scarlet Globe
FD944335       <-- CTGATGTTGCAGAAGTTTGCGTTCAGGCGTTGCAGCTCGAGGAGTCAAAG  Raphanus sativus cv Early Scarlet Globe
EX908014       <-- CTGATGTTGCAGAAGTCTGCGTTCAGGCGTTGCAGCTCGAGGAGGCAAAG  Raphanus sativus cv Rat-Tail Radish #3870
FD969402       <-- CTGATGTTGCAGAAGTCTGCGTTCAGGCGTTGCAGCTCGAGGAGGCAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757327       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940782       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD971718       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973291       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535078       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899849       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY940159       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV536148       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547974       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV551550       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW733939       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY898970       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD541836       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948573       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD973772       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980663       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939500       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX748220       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV568291       --> ..................................................  Raphanus raphanistrum subsp. landra
EX764517       --> CTGATGTTGCAGAAGTCTGCGTTCAG---------CTCGAGGAGGCAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD990242       --> CTGATGTTGCAGAAGTCTGCGTTCAGGCGTTGCAGCTCGAGGAGGCAAAG  Raphanus raphanistrum subsp. landra
EX750077       --> CTGATGTTGCAGAAGTCTGCGTTCAG-CGTTGCAGCTCGAGGAGGCAAAG  Raphanus raphanistrum subsp. maritimus
EV552321       --> CTGATGTTGCAGAAGTCTGCGTTCAGGCGTTGCAGCTCGAGGAGTCAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566479       --> ..................................................  Raphanus raphanistrum subsp. landra
EX756422       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773109       --> CTGATGTTGCAGAAGTCTGCGTTCAGGCGTTGCAGCTCGAGGAGGCAAAG  Raphanus raphanistrum subsp. landra

               948    -    998
UN23482        --> TTTAAAGCACTTGATCTGGCCTCAAAGCCTGAGGGAACAGGCACCCCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546628       <-- TTTAAAGCACTTGATCTGGCCTCAAAGCCTGAGGGAACAGGCACCCCAAC
FY437746       <-- TTTAAAGCACTTGATCTGGCCTCAAAGCCTGAGGGAACAGGCACCCCAAC
EV539840       <-- TTTAAAGCACTTGATCTGGCCTCAAAGCCTGAGGGAACAGGCACCCCAAC
EV543741       <-- TTTAAAGCACTTGATCTGGCCTCAAAGCCTGAGGGAACAGGCACCCCAAC
EV571600       <-- TTTAAAGCACTTGATCTGGCCTCAAAGCCTGAGGGAACAGGCACCCCAAC
EX760945       <-- TTTAAAGCACTTGATCTGGCCTCAAAGCCTGAGGGAACAGGCACCCCAAC
EX776960       <-- TTTAAAGCACTTGATCTGGCCTCAAAGCCTGAGGGAACAGGCACCCCAAC
EX760235       <-- TTTAAAGCACTTGATCTGGCCTCAAAGCCTGAGGGAACAGGCACCCCAAC
EV540662       <-- TTTAAAGCACTTGATCTGGCCTCAAAGCCTGAGGGAACAGGCACCCCAAC
EX752226       <-- TTTAAAGCACTTGATCTGGCCTCAAAGCCTGAGGGAACAGGCACCCCAAC
EX753630       <-- TTTAAAGCACTTGATCTGGCCTCAAAGCCTGAGGGAACAGGCACCCCAAC
FD982513       <-- TTTAAAGCACTTGATCTGGCCTCAAAGCCTGAGGGAACAGGCACCCCAAC
EV573052       <-- TTTAAAGCACTTGATCTGGCCTCAAAGCCTGAGGGAACAGGCACCCCAAC
EY895538       <-- TTTAAAGCACTTGATCTGGCCTCAAAGCCTGAGGGAACAGGCACCCCAAC
EY935962       <-- TTTAAAGCACTTGATCTGGCCTCAAAGCCTGAGGGAACAGGCACCCCAAC
FD545419       <-- TTTAAAGCACTTGATCTGGCCTCAAAGCCTGAGGGAACAGGCACCCCAAC
FD552866       <-- TTTAAAGCACTTGATCTGGCCTCAAAGCCTGAGGGAACAGGCACCCCAAC
FD538039       <-- TTTAAAGCACTTGATCTGGCCTCAAAGCCTGAGGGAACAGGCACCCCAAC
FD976524       <-- TTTAAAGCACTTGATCTGGCCTCAAAGCCTGAGGGAATAGGCACCCCAAC
FY437052       <-- TTTAAAGCACTTGATCTGGCCTCAAAGCCTGAGGGAACAGGCACCCCAAC
EV547255       <-- TTTAA.............................................
EW739154       <-- TTTAAAGCACTTGATTTGGCCTCAAAGCCTGAGGGAACAGGCCCCCCAAC
EY936490       <-- TTTAAAGCACTTGATCTGGCCTCAAAGCCTGAGGGAACAGGCACCCCAAC
FD944335       <-- TTTAAAGCACTTGATTTGGCCTCAAAACCTGAGGGAACAGGCACCCCAAC
EX908014       <-- TTTAAAGCACTTGATCTGGCCTCAAAGCCTGAGGGAACAGGCACCCCAAC
FD969402       <-- TTTAAAGCACTTGATCTGGCCTCAAAGCCTGAGGGAACAGGCACCCCAAC
EX757327       --> ..................................................
EY940782       --> ..................................................
FD971718       --> ..................................................
FD973291       --> ..................................................
EV535078       --> ..................................................
EY899849       --> ..................................................
EY940159       --> ..................................................
EV536148       --> ..................................................
EV547974       --> ..................................................
EV551550       --> ..................................................
EW733939       --> ..................................................
EY898970       --> ..................................................
FD541836       --> ..................................................
FD948573       --> ..................................................
FD973772       --> ..................................................
FD980663       --> ..................................................
EY939500       --> ..................................................
EX748220       --> ..................................................
EV568291       --> ..................................................
EX764517       --> TTTAAAGCACTTGATCTGGCCTCAAAGCCTGAGGG...............
FD990242       --> TTTAAAGCACTTGATCTGGCCTCAAAGCCTGAGGGAACAGGCACCCCAAC
EX750077       --> TTTAAAGCACTTGATCT.................................
EV552321       --> TTTAAAGCACTTGATCTGGCCTCAAAGCCTGAGGGAACAGGCACCCCAAC
EV566479       --> ..................................................
EX756422       --> ..................................................
EX773109       --> TTTAAAGCACTTGATCTGGCCTCAAAGCCTGAGGGAACAGGCACCCCAAC

               998    -   1048
UN23482        --> AAAGGATTTCAAGGCACTTTTCGCTCAAGTTACCGCTCGGTTCTAATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546628       <-- AAAGGATTTCAAGGCACTTTTCGCTCAAGTTACCGCTCGGTTCTAATCTT
FY437746       <-- AAAGGATTTCAAGGCACTTTTCGCTCAAGTTACCGCTCGGTTCTAATCTT
EV539840       <-- AAAGGATTTCAAGGCACTTTTCGCTCAAGTTACCACTCGGTTCTAATCTT
EV543741       <-- AAAGGATTTCAAGGCACTTTTCGCTCAAGTTACCGCTCGGTTCTAATCTT
EV571600       <-- AAAGGATTTCAAGGCACTTTTCGCTCAAGTTACCGCTCGGTTTTAATCTT
EX760945       <-- AAAGGATTTCAAGGCACTTTTCGCTCAAGTTACCGCTCGGTTCTAATCTT
EX776960       <-- AAAGGATTTCAAGGCACTTTTCGCTCAAGTTACCGCTCGGTTTTAATCTT
EX760235       <-- AAAGGATTTCAAGGCACTTTTCGCTCAAGTTACCGCTCGGTTCTAATCTT
EV540662       <-- AAAGGATTTCAAGGCACTTTTCGCTCAAGTTACCGCTCGGTTCTAATCTT
EX752226       <-- AAAGGATTTCAAGGCACTTTTCGCTCAAGTTACCGCTCGGTTCTAATCTT
EX753630       <-- AAAGGATTTCAAGGCACTTTTCGCTCAAGTTACCGCTCAGTTTTAATTTT
FD982513       <-- AAAGGATTTCAAGGCACTTTTCGCTCAAGTTACCGCTCGGTTCTAATCTT
EV573052       <-- AAAGGATTTCAAGGCACTTTTCGCTCAAGTTACCGCTCGGTTCTAATCTT
EY895538       <-- AAAGGATTTCAAGGCACTTTTCGCTCAAGTTACCGCTCGGTTCTAATCTT
EY935962       <-- AAAGGATTTCAAGGCACTTTTCGCTCAAGTTACCGCTCGGTTCTAATCTT
FD545419       <-- AAAGGATTTCAAGGCACTTTTCGCTCAAGTTACCGCTCGGTTCTAATCTT
FD552866       <-- AAAGGATTTCAAGGCACTTTTCGCTCAAGTTACCGCTCGGTTCTAATCTT
FD538039       <-- AAAGGATTTCAAGGCACTTTTCGCTCAAGTTACCGCTCGGTTCTAATCTT
FD976524       <-- AAAGGATTTCAAGGCACTTTTCGCTCAAGTTACCGCTCGGTTCTAATCTT
FY437052       <-- AAAGGATTTCAAGGCACTTTTCGCTCAAGTTACCGCTCGGTTCTAATCTT
EV547255       <-- ..................................................
EW739154       <-- AAAGGATTTCAAGGCACTTTTCGCTCAAGTTACCGCTCGGTTTTAATTTT
EY936490       <-- AAAGGATTTCAAGGCACTTTTCGCTCAAGTTACCGCTCGGTTCTAATCTT
FD944335       <-- AAAGGATTTCAAGGCACTTTTCGCTCAAGTTACCGCTCGGTTTTAATTTT
EX908014       <-- AAAGGATTTCAAGGCACTTTTCGCTCAAGTTACCGCTCGGTTCTAATCTT
FD969402       <-- AAAGGATTTCAAGGCACTTTTCGCTCAAGTTACCGCTCGGTTCTAATCTT
EX757327       --> ..................................................
EY940782       --> ..................................................
FD971718       --> ..................................................
FD973291       --> ..................................................
EV535078       --> ..................................................
EY899849       --> ..................................................
EY940159       --> ..................................................
EV536148       --> ..................................................
EV547974       --> ..................................................
EV551550       --> ..................................................
EW733939       --> ..................................................
EY898970       --> ..................................................
FD541836       --> ..................................................
FD948573       --> ..................................................
FD973772       --> ..................................................
FD980663       --> ..................................................
EY939500       --> ..................................................
EX748220       --> ..................................................
EV568291       --> ..................................................
EX764517       --> ..................................................
FD990242       --> AAAGGATTTCAAGGCACTTTTCGCTCA-GTTACCGCTCGATTCTAATCTT
EX750077       --> ..................................................
EV552321       --> AAAGGATTTCAAGGCACTTTTCGCTCAAGTTACCGCTCGGTTCTAATCTT
EV566479       --> ..................................................
EX756422       --> ..................................................
EX773109       --> AAAGGATTTCAAGGCACTTTTCGCTCAAGTTACCGCTCGGTTCTAATCTT

               1048   -   1098
UN23482        --> CTGTTACTCTGTCTTTGTAGCAGAGTCATAGGATTAGAGACTTCGAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546628       <-- CTGTTACTCTGTCTTTGTAGCAGAGTCATAGGATTAGAGACTTCGAGGAA
FY437746       <-- CTGTTACTCTGTCTTTGTAGCAGAGTCATAGGATTAGAGACTTCGAGGAA
EV539840       <-- CTGTTACTCTGTCTTTGTAGCAGAGTCATAGGATTAGAGACTTCGAGGAA
EV543741       <-- CTGTTACTCTGTCTTTGTAGCAGAGTCATAGGATTAGAGACTTCGAGGAA
EV571600       <-- CTGTTACTCTGTCTTTGTAGCAGAGTCATAGGATTAGAGACTTCGAGTAA
EX760945       <-- CTGTTACTCTGTCTTTGTAGCAGAGTCATAGGATTAGAGACTTCGAGGAA
EX776960       <-- CTGTTACTCTGTCTTTGTAGCAGAGTCATAGGATTAGAGACTTCGAGTAA
EX760235       <-- CTGTTACTCTGTCTTTGTAGCAGAGTCATAGGATTAGAGACTTCGAGGAA
EV540662       <-- CTGTTACTCTGTCTTTGTAGCAGAGTCATAGGATTAGAGACTTCGAGGAA
EX752226       <-- CTGTTACTCTGTCTTTGTAGCAGAGTCATAGGATTAGAGACTTCGAGGAA
EX753630       <-- CTGTTACTCTGTCTTTGTAGCAGAGTCATAGGATTAGAGACTTCGAGGAA
FD982513       <-- CTGTTACTCTGTCTTTGTAGCAGAGTCATAGGATTAGAGACTTCGAGGAA
EV573052       <-- CTGTTACTCTGTCTTTGTAGCAGAGTCATAGGATTAGAGACTTCGAGGAA
EY895538       <-- CTGTTACTCTGTCTTTGTAGCAGAGTCATAGGATTAGAGACTTCGAGGAA
EY935962       <-- CTGTTACTCTGTCTTTGTAGCAGAGTCATAGGATTAGAGACTTCGAGGAA
FD545419       <-- CTGTTACTCTGTCTTTGTAGCAGAGTCATAGGATTAGAGACTTCGAGGAA
FD552866       <-- CTGTTACTCTGTCTTTGTAGCAGAGTCATAGGATTAGAGACTTCGAGGAA
FD538039       <-- CTGTTACTCTGTCTTTGTAGCAGAGTCATAGGATTAGAGACTTCGAGGAA
FD976524       <-- CTGTTACTCTGTCTTTGTAGCAGAGTCATAGGATTAGAGACTTCGAGGAA
FY437052       <-- CTGTTACTCTGTCTTTGTAGCAGAGTCATAGGATTAGAGACTTCGAGGAA
EV547255       <-- ..................................................
EW739154       <-- TTGTTACTCTGTTTTTGTAGCAGAGTCATAGGATTAGAGACTTCGAGGAA
EY936490       <-- CTGTTACTCTGTCTTTGTAGCAGAGTCATAGGATTAGAGACTTCGAGGAA
FD944335       <-- TTGTTACTCTGTTTTTGTAGCAGAGTCATAGGATTAGAGACTTCGAGGAA
EX908014       <-- CTGTTACTCTGTCTTTGTAGCAGAGTCATAGGATTAGAGACTTCGAGGAA
FD969402       <-- CTGTTACTCTGTCTTTGTAGCAGAGTCATAGGATTAGAGACTTCGAGGAA
EX757327       --> ..................................................
EY940782       --> ..................................................
FD971718       --> ..................................................
FD973291       --> ..................................................
EV535078       --> ..................................................
EY899849       --> ..................................................
EY940159       --> ..................................................
EV536148       --> ..................................................
EV547974       --> ..................................................
EV551550       --> ..................................................
EW733939       --> ..................................................
EY898970       --> ..................................................
FD541836       --> ..................................................
FD948573       --> ..................................................
FD973772       --> ..................................................
FD980663       --> ..................................................
EY939500       --> ..................................................
EX748220       --> ..................................................
EV568291       --> ..................................................
EX764517       --> ..................................................
FD990242       --> CTGTTACTCTGTCTTTGTAGCAGAGTC.......................
EX750077       --> ..................................................
EV552321       --> CTGTTACTCTGTCTTTGTAGCAGAGTCATAGGATTAGAGACTTCGAGGAA
EV566479       --> ..................................................
EX756422       --> ..................................................
EX773109       --> CTGTTACTCTGTCTTTGTAGCAGAGTCA......................

               1098   -   1148
UN23482        --> TAATAAATACATTTTGTGAGATACACTCGTCTGAATCGGCTCTTTCTATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546628       <-- TAATAAATACATTTTGTGAG..............................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437746       <-- TAATAAATACATTTTGTGAGATACACTTGTCTGAATCGGCTCTTTC....  Raphanus sativus cv GSK3-1
EV539840       <-- TAATAAATACATTTTGTGAGATAC..........................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV543741       <-- TAATAAGTACATTTTGTGAG..............................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571600       <-- TAATAAGTACATTTTGTGAGATACACTTGTCTGAATCGGCTCTTTCTATA  Raphanus raphanistrum subsp. landra
EX760945       <-- TAATAAATACATTTTGTGAGATACACTCGTCTGAATCGGCTCTTTCTAT.  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776960       <-- TAATAAGTACATTTTGTGAGATACACTTGTTTGAATCGGCTCTTTCTGTA  Raphanus raphanistrum subsp. landra
EX760235       <-- TAATAAATACATTTTGTGAGATACACTCGTCTGAATCGGCTCTTTCTATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540662       <-- TAATAAATACATTTTGTGAGATACACTCGTCTGAATCGGCTCTTTCTATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752226       <-- TAATAAGTACATTTTGTGAGA.............................  Raphanus raphanistrum subsp. maritimus
EX753630       <-- TAATAAATACATTTTGTGAGATACACTTGTTTAAATCGGCTCTTTCTATA  Raphanus raphanistrum subsp. maritimus
FD982513       <-- TAATAAACACATTTTGTGAGATACACTCGTCTGAATCGGCTCTTTCTATA  Raphanus raphanistrum subsp. landra
EV573052       <-- TAATAAGTACATTTTGTGAGATACACTCGTCTGAATCGGCTCTTTCTATA  Raphanus raphanistrum subsp. landra
EY895538       <-- TAATAAATACATTTTGTGAGATACACTTGTTTAAATCGGCTCTTTCTAT.  Raphanus raphanistrum subsp. maritimus
EY935962       <-- TAATAAATACATTTTGTGAGATAC..........................  Raphanus sativus cv Early Scarlet Globe
FD545419       <-- TAATAAGTACATTTTGTGAG..............................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552866       <-- TAATAAGTACATTTTGTGAGATACACTCGTCTGAATCGGCTCTTTCTATA  Raphanus raphanistrum subsp. landra
FD538039       <-- TAATAAATACATTTTGTGAGATACACTCGTCTGAATCGGCTCTTTCTATA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976524       <-- TAATAAGTACATTTTGTGAGATACACTCGTCTGAATCGGCTCTTTCTATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY437052       <-- TAATAAATACATTTTGTGAGATACACTTGTCTGAATCGGCTCTTTCTATA  Raphanus sativus cv GSK3-1
EV547255       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739154       <-- TAATAAATACATTTTGTGGGATAC..........................  Raphanus sativus cv Rat-Tail Radish #3870
EY936490       <-- TAATAAATACATTTTGTGAGATACACTCGTCTGAATCGGCTCTTTCTATA  Raphanus sativus cv Early Scarlet Globe
FD944335       <-- TAATAAATACATTTTGTGAGATACAC........................  Raphanus sativus cv Early Scarlet Globe
EX908014       <-- TAATAAATACATTTTGTGAG..............................  Raphanus sativus cv Rat-Tail Radish #3870
FD969402       <-- TAATAAATACATTTTGTGAGATACACTCGTCTGAATCGGCTCTTTCTATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757327       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940782       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD971718       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973291       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535078       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899849       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY940159       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV536148       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547974       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV551550       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW733939       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY898970       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD541836       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948573       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD973772       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980663       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939500       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX748220       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV568291       --> ..................................................  Raphanus raphanistrum subsp. landra
EX764517       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD990242       --> ..................................................  Raphanus raphanistrum subsp. landra
EX750077       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV552321       --> TAATAAATACATTTTGTGAGATAC..........................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566479       --> ..................................................  Raphanus raphanistrum subsp. landra
EX756422       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773109       --> ..................................................  Raphanus raphanistrum subsp. landra

               1148   -   1198
UN23482        --> TTTCTGAAGTAGTCTTACTCTAAAGATTCTAGATAATATCAAAAGCCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV546628       <-- ..................................................
FY437746       <-- ..................................................
EV539840       <-- ..................................................
EV543741       <-- ..................................................
EV571600       <-- TTTCTGAAGTAGTCTTCCTC..............................
EX760945       <-- ..................................................
EX776960       <-- TTTCTGAAGTAGTCTTCCTCTAAAGATTCTAGATAATATCAAAAGCCTTT
EX760235       <-- TTTCTGAAGTAGTCTTACTCTAAAGATTCTAGATAATATCAAAAGCCTTT
EV540662       <-- TTTCTGAAGTAGTCTTACTCTAAAGATTCTAGAT................
EX752226       <-- ..................................................
EX753630       <-- TTTTTGAAGT........................................
FD982513       <-- TTTCTG............................................
EV573052       <-- TTTCTGAAGTAGTCTTACTCTAAAGATTCTAGATAATATCAAAAGCCTTT
EY895538       <-- ..................................................
EY935962       <-- ..................................................
FD545419       <-- ..................................................
FD552866       <-- TTTCTGAAGT........................................
FD538039       <-- TTTCTGAAGTAGTCTTACTCTAAAGATTCTAGATAATATCAAAAGCCTTT
FD976524       <-- TTTCTGAAGCAGTCTTCCTCTAAAGATTCTAGATAATATCAAAAGCCTTT
FY437052       <-- TTTCTGAAGTAGTCTTCCTCT.............................
EV547255       <-- ..................................................
EW739154       <-- ..................................................
EY936490       <-- TTTCTGAAGTAGTCTTCCTCT.............................
FD944335       <-- ..................................................
EX908014       <-- ..................................................
FD969402       <-- TTTCTGAAGTAGTCTTACTCTAAAGATTCTAGATAATATCAAAAGCCTTc
EX757327       --> ..................................................
EY940782       --> ..................................................
FD971718       --> ..................................................
FD973291       --> ..................................................
EV535078       --> ..................................................
EY899849       --> ..................................................
EY940159       --> ..................................................
EV536148       --> ..................................................
EV547974       --> ..................................................
EV551550       --> ..................................................
EW733939       --> ..................................................
EY898970       --> ..................................................
FD541836       --> ..................................................
FD948573       --> ..................................................
FD973772       --> ..................................................
FD980663       --> ..................................................
EY939500       --> ..................................................
EX748220       --> ..................................................
EV568291       --> ..................................................
EX764517       --> ..................................................
FD990242       --> ..................................................
EX750077       --> ..................................................
EV552321       --> ..................................................
EV566479       --> ..................................................
EX756422       --> ..................................................
EX773109       --> ..................................................

               1198   -   1248
UN23482        --> GAAATTTGATA..
                   ~~~~~~~~~~~~~
EV546628       <-- .............
FY437746       <-- .............
EV539840       <-- .............
EV543741       <-- .............
EV571600       <-- .............
EX760945       <-- .............
EX776960       <-- GAATTTT......
EX760235       <-- GAAATTTGATAtc
EV540662       <-- .............
EX752226       <-- .............
EX753630       <-- .............
FD982513       <-- .............
EV573052       <-- GAAATTTGATAcc
EY895538       <-- .............
EY935962       <-- .............
FD545419       <-- .............
FD552866       <-- .............
FD538039       <-- GAAATTTGATAtc
FD976524       <-- GAAATTTGATAcc
FY437052       <-- .............
EV547255       <-- .............
EW739154       <-- .............
EY936490       <-- .............
FD944335       <-- .............
EX908014       <-- .............
FD969402       <-- g............
EX757327       --> .............
EY940782       --> .............
FD971718       --> .............
FD973291       --> .............
EV535078       --> .............
EY899849       --> .............
EY940159       --> .............
EV536148       --> .............
EV547974       --> .............
EV551550       --> .............
EW733939       --> .............
EY898970       --> .............
FD541836       --> .............
FD948573       --> .............
FD973772       --> .............
FD980663       --> .............
EY939500       --> .............
EX748220       --> .............
EV568291       --> .............
EX764517       --> .............
FD990242       --> .............
EX750077       --> .............
EV552321       --> .............
EV566479       --> .............
EX756422       --> .............
EX773109       --> .............