1      -     51
UN23494        --> AGTTTTGGAAAAGTGTAGGAATGACTTTTGAGATTT-ATAATCCGAAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- ..................................................
EX898090       <-- ..................................................
EY914014       <-- ..................................................
FD542607       <-- ..................................................
EY900604       <-- ..................................................
EY930178       <-- ..................................................
FD561714       <-- ..................................................
EW714533       <-- ..................................................
EY913299       <-- ..................................................
FY443448       <-- ..................................................
FD949684       <-- ..................................................
EY915939       <-- ..................................................
FD570849       <-- ..................................................
EX747868       <-- ..................................................
EY897863       <-- ..................................................
EV536690       <-- ..................................................
FY450227       <-- ..................................................
EV535353       <-- ..................................................
FD954084       <-- ..................................................
FD534245       <-- ..................................................
EV546785       --> AGTTTTGGAAAAGTGTAGGAATGACTTTTGAGATTT-ATAATCCGAAAAT
EV540060       --> ......GGAAAAGTGTAGGAATGACTT--GAGATTTTATAATCCGAAAAT
EY909555       --> ......GGAAAAGTGTAGGAATGACTTTTGAGATTT-ATAATCCGAAAAT
EX751955       --> ................AGGAATGACTTTTGAGATTT-ATAATCCGAAAAT
EV541079       --> ......................ggCTTTTGAGATTT-ATAATCCGAAAAT
EW720392       --> ..................................................
EX901720       --> ..................................................
EY911696       --> ..................................................
FD538635       --> ..................................................
FD945300       --> ..................................................
FD574787       --> ..................................................
EY910142       --> ..................................................
EX892597       --> ..................................................
FY449013       --> ..................................................
EY896105       --> ..................................................
EY926434       --> ..................................................
FD530236       --> ..................................................
FY442208       --> ..................................................
EW719650       --> ..................................................
EY894067       --> ..................................................
FY445741       --> ..................................................

               51     -    101
UN23494        --> GAAACACAAAGCTTGAAAGAACAAAAGCAATATTTTTTT-GGCAGTGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- GAAACACAAAGCTTGAAAGAACAAAAGCAATATTTTT---TGCAGTGACA
EX898090       <-- ..............GAAAGAACAAAAGCAATATTTTTTTTTGCAGTGACA
EY914014       <-- ..................GAACAAAAGCAATATTTTTTT-TGCAGTGACA
FD542607       <-- .................................TTTTTT-GGCAGTGACA
EY900604       <-- ..................................................
EY930178       <-- ..................................................
FD561714       <-- ..................................................
EW714533       <-- ..................................................
EY913299       <-- ..................................................
FY443448       <-- ..................................................
FD949684       <-- ..................................................
EY915939       <-- ..................................................
FD570849       <-- ..................................................
EX747868       <-- ..................................................
EY897863       <-- ..................................................
EV536690       <-- ..................................................
FY450227       <-- ..................................................
EV535353       <-- ..................................................
FD954084       <-- ..................................................
FD534245       <-- ..................................................
EV546785       --> GAAACACAAAGCTTGAAAGAACAAAAGCAATATTTTTTT-G-CAGTGACA
EV540060       --> GAAACACAAAGCTTGAAAGAACAAAAGCAATATTTTTTT-TGCAGTGACA
EY909555       --> GAAACACAAAGCTTGAAAGAACAAAAGCAATATTTTTTT-G-CAGTGACA
EX751955       --> GAAACACAAAGCTTGAAAGAACAAAAGCAATATTTTTTT-TGCAGTGACA
EV541079       --> GAAACACAAAGCTTGAAAGAACAAAAGCAATATTTTTTTTGGCAGTGACA
EW720392       --> ..............GAAAGAACAAAAGCAATATTTTTTT-GGCAGTGACA
EX901720       --> ..............GAAAGAACAAAAGCAATATTTTTTTTTGCAGTGACA
EY911696       --> ..............GAAAGAACAAAAGCAATATTTTTTT-G-CAGTGACA
FD538635       --> ..............GAAAGAACAAAAGCAATATTTTTTT-GGCAGTGACA
FD945300       --> ..............GAAAGAACAAAAGCAATATTTTTTT-GGCAGTGACA
FD574787       --> ..............ggAAGAACAAAAGCAATATTTTTTT-GGCAGTGACA
EY910142       --> ..................GAACAAAAGCAATATTTTTTTTTGCAGTGACA
EX892597       --> ...................AACAAAAGCAATATTTTTTT-GGCAGTGACA
FY449013       --> .........................................GCAGTGACA
EY896105       --> ..................................................
EY926434       --> ..................................................
FD530236       --> ..................................................
FY442208       --> ..................................................
EW719650       --> ..................................................
EY894067       --> ..................................................
FY445741       --> ..................................................

               101    -    151
UN23494        --> AAAACAATAAAGCAATACACGCATAAGTTTTTTTAACATCCCAAAA-TGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- AAAACAATAAAGCAATACACGCATAAGTTTT--TAACATCCCAAAAATGA
EX898090       <-- AAAACAATAAAGCAATACACGCATAAGTTTTTTTAACATCCCAAAA-TGA
EY914014       <-- AAAACAATAAAGCAATACACGCATAAGTTTTTT-AACATCCCAAAA-TGA
FD542607       <-- AAA-CAATAAAGCAATACACGCATAAGTTTTTT-AACATCCCAAAA-TGA
EY900604       <-- .....AATAAAGCAATACACGCATAAGTTTTTTTAACATCCCAAAA-TGA
EY930178       <-- .....AATAAAGCAATACACGCATAAGTTTTTTTAACATCCCAAAA-TGA
FD561714       <-- .....AATAAAGCAATACACGCATAAGTTTTTT-AACATCCCAAAA-TGA
EW714533       <-- ..................................AACATCCCAAAA-TGA
EY913299       <-- .........................................CAAAA-TGA
FY443448       <-- ..................................................
FD949684       <-- ..................................................
EY915939       <-- ..................................................
FD570849       <-- ..................................................
EX747868       <-- ..................................................
EY897863       <-- ..................................................
EV536690       <-- ..................................................
FY450227       <-- ..................................................
EV535353       <-- ..................................................
FD954084       <-- ..................................................
FD534245       <-- ..................................................
EV546785       --> AAAACAATAAAGCAATACACGCATAAGTTTTTT-AACATCCCAAAA-TGA
EV540060       --> AAAACAATAAAGCAATACACGCATAAGTTTTTT-AACATCCCAAAA-TGA
EY909555       --> AAAACAATAAAGCAATACACGCATAAGTTTTTT-AACATCCCAAAA-TGA
EX751955       --> AAAACAATAAAGCAATACACGCATAAGTTTTTT-AACATCCCAAAA-TGA
EV541079       --> AAAACAATAAAGCAATACACGCATAAGTTTTTTTAACATCCCAAAA-TGA
EW720392       --> AAAACAATAAAGCAATACACGCATAAGTTTTTTTAACATCCCAAAA-TGA
EX901720       --> AAAACAATAAAGCAATACACGCATAAGTTTTTTTAACATCCCAAAA-TGA
EY911696       --> AAAACAATAAAGCAATACACGCATAAGTTTTTT-AACATCCCAAAA-TGA
FD538635       --> AAAACAATAAAGCAATACACGCATAAGTTTTTTTAACATCCCAAAA-TGA
FD945300       --> AAAACAATAAAGCAATACACGCATAAGTTTTTTTAACATCCCAAAA-TGA
FD574787       --> AAAACAATAAAGCAATACACGCATAAGTTTTTTTAACATCCCAAAA-TGA
EY910142       --> AAAACAATAAAGCAATACACGCATAAGTTTTTT-AACATCCCAAAA-TGA
EX892597       --> AAAACAATAAAGCAATACACGCATAAGTTTTTTTAACATCCCAAAA-TGA
FY449013       --> AAA-CAATAAAGCAATACACGCATAAGTTTTTTTAACATCCCAAAA-TGA
EY896105       --> .....AATAAAGCAATACACGCATAAGTTTTTTTAACATCCCAAAA-TGA
EY926434       --> .....AATAAAGCAATACACGCATAAGTTTTTTTAACATCCCAAAA-TGA
FD530236       --> .....AATAAAGCAATACACGCATAAGTTTTTTTAACATCCCAAAA-TGA
FY442208       --> .....AATAAAGCAATACACGCATAAGTTTTTTTAACATCCCAAAA-TGA
EW719650       --> ..................................................
EY894067       --> ..................................................
FY445741       --> ..................................................

               151    -    201
UN23494        --> ACTTGTGTTTCAAGAA-CAAAGCACACATAAACTGAACAAAAGAAATAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- ACTTTTGTTTCAAGAA-CAAAGCACACATAAACTGAACAAAAGAAATAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX898090       <-- ACTTGTGTTTCAAGAA-CAAAGCACACATAAACTGAACAAAAGAA--AGA  Raphanus sativus cv Early Scarlet Globe
EY914014       <-- ACTTTTGTTTCAAGAA-CAAAGCACACATAAACTGAACAAAAGAAATAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD542607       <-- ACTTGTGTTTCAAGAA-CAAAGCACACATAAACTGAACAAAAGAAATAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900604       <-- ACTTGTGTTTCAAGAA-CAAAGCACACATAAACTGAACAAAAGAAATAGA  Raphanus raphanistrum subsp. maritimus
EY930178       <-- ACTTGTGTTTCAAGAAACAAAGCACACATAAACTGAACAAAAGAAATAGA  Raphanus sativus var. oleiformis
FD561714       <-- ACTTGTGTTTCAAGAAACAAAGCACACATAAACTGAACAAAAGAAATAGA  Raphanus sativus var. oleiformis
EW714533       <-- ACTTGTGTTTCAAGAAACAAAGCACGCATAAACTGAACAAAAGAAATAGA  Raphanus sativus var. oleiformis
EY913299       <-- ACTT-TG-TTCAAGAA-CAAAGCACACATAAACTGAACAAA-GAAATAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY443448       <-- ..................................................  Raphanus sativus cv GSK3-1
FD949684       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY915939       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570849       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX747868       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY897863       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV536690       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450227       <-- ..................................................  Raphanus sativus cv GSK3-1
EV535353       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954084       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD534245       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV546785       --> ACTTTTGTTTCAAGAA-CAAAGCACACATAAACTGAACAAAAGAAATAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540060       --> ACTTGTGTTTCAAGAA-CAAAGCACACATAAACTGAACAAAAGAAATAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909555       --> ACTTTTGTTTCAAGAA-CAAAGCACACATAAACTGAACAAAAAAAATAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751955       --> ACTTTTGTTTCAAGAA-CAAAGCACACATAAACTGAACAAAAGAAATAGA  Raphanus raphanistrum subsp. maritimus
EV541079       --> ACTTGTGTTTCAAGAA-CAAAGCACACATAAACTGAACAAAAGAAATAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720392       --> ACTTGTGTTTCAAGAAACAAAGCACAAATAAACTGAACAAAAGAAATAGA  Raphanus sativus var. oleiformis
EX901720       --> ACTTGTGTTTCAAGAA-CAAAGCACACATAAACTGAACAAAAGAAA--GA  Raphanus sativus cv Early Scarlet Globe
EY911696       --> ACTTTTGTTTCAAGAA-CAAAGCACACATAAACTGAACAAAAGAAATAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538635       --> ACTTGTGTTTCAAGAA-CAAAGCACACATAAACTGAACAAAAGAAATAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945300       --> ACTTGTGTTTCAAGAAACAAAGCACACATAAACTGAACAAAAGAAATAGA  Raphanus sativus cv Early Scarlet Globe
FD574787       --> ACTTGTGTTTCAAGAAACAAAGCACACATAAACTGAACAAAAGAAATAGA  Raphanus sativus cv Early Scarlet Globe
EY910142       --> ACTTTTGTTTCAAGAA-CAAAGCACACATAAACTGAACAAAAGAAATAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892597       --> ACTTGTGTTTCAAGAAACAAAGCACACATAAACTGAACAAAAGAAATAGA  Raphanus sativus var. oleiformis
FY449013       --> ACTTGTGTTTCAAGAA-CAAAGCACACATAAACTGAACAAAAGAAATAGA  Raphanus sativus cv GSK3-1
EY896105       --> ACTTGTGTTTCAAGAA-CAAAGCACACATAAACTGAACAAAAGAAATAGA  Raphanus raphanistrum subsp. maritimus
EY926434       --> ACTTGTGTTTCAAGAAACAAAGCACACATAAACTGAACAAAAGAAATAGA  Raphanus sativus var. oleiformis
FD530236       --> ACTTGTGTTTCAAGAA-CAAAGCACACATAAACTGAACAAAAGAAATAGA  Raphanus raphanistrum subsp. maritimus
FY442208       --> ACTTGTGTTTCAAGAA-CAAAGCACACATAAACTGAACAAAAGAAATAGA  Raphanus sativus cv GSK3-1
EW719650       --> .........TCAAGAAACAAAGCACGCATAAACTGAACAAAAGAAATAGA  Raphanus sativus var. oleiformis
EY894067       --> ..............................................aata  Raphanus raphanistrum subsp. maritimus
FY445741       --> ..................................................  Raphanus sativus cv GSK3-1

               201    -    251
UN23494        --> -TTTT-AAAGG--GAAGAAGGAAGCA---ACTGCGGCTTACACAGCTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- -TTT--AAAGG--GAAGAAGGAAGCAGCAACAGCGGCTTACACAGCTTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX898090       <-- -TTTA-AAAGG--GAAGAAGGAAGCA---ACTGCGGCTTACACAGCTTAT  Raphanus sativus cv Early Scarlet Globe
EY914014       <-- -TTT--AAAGG--GAAGAAGGAAGCAGCAACTGCGGCTTACACAGCTTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD542607       <-- -TTTA-AAAGG--GAAGAAGGAAGCA---ACTGCGGCTTACACAGCTTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900604       <-- -TTTA-AAAGG--GAAGAAGGAAGCA---ACTGCGGCTTACACAGCTTAT  Raphanus raphanistrum subsp. maritimus
EY930178       <-- -TTTTTAAAGG--GAGGAAGGAAGCA---ACTGCGGCTTACACAGCTTAT  Raphanus sativus var. oleiformis
FD561714       <-- -TTTTTAAAGG--GAAGAAGGAAGCA---ACTGCGGCTTACACAGCTTAT  Raphanus sativus var. oleiformis
EW714533       <-- -TTTTTAAAGG--GAAGAAGGAAGCA---ACTGCGGCTTACACAGCTTAT  Raphanus sativus var. oleiformis
EY913299       <-- -TTT--AAAGG--GAAGAAGGAAGCAGCAACAGCGGCTTACACAGCTTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY443448       <-- ........................CA---ACTGCGGCTTACACAGCTTAT  Raphanus sativus cv GSK3-1
FD949684       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY915939       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570849       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX747868       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY897863       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV536690       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450227       <-- ..................................................  Raphanus sativus cv GSK3-1
EV535353       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954084       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD534245       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV546785       --> -TTT--AAAGG--GAAGAAGGAAGCAGCAACAGCGGCTTACACAGCTTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540060       --> -TTTA-AAGGGAAGAAGAAGGAAGCA---ACTGCGGCTTACACAGCTTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909555       --> -TTT--AAAGG--GAAAAAGGAAGCAGCAACAGCGGCTTACACAGCTTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751955       --> -TTT--AAAGG--GAAGAAGGAAGCAGCAACTGCGGCTTACACAGCTTAT  Raphanus raphanistrum subsp. maritimus
EV541079       --> -TTTA-AAAGG--GAAGAAGGAAGCA---ACTGCGGCTTACACAGCTTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720392       --> -TTTTTAAAGG--GAAGAAGGAAGCA---ACTGCGGCTTACACAGCTTAT  Raphanus sativus var. oleiformis
EX901720       --> -TTTA-AAAGG--GAAGAAGGAAGCA---ACTGCGGCTTACACAGCTTAT  Raphanus sativus cv Early Scarlet Globe
EY911696       --> -TTT--AAAGG--GAAGAAGGAAGCAGCAACTGCGGCTTACACAGCTTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538635       --> -TTTA-AAAGG--GAAGAAGGAAGCA---ACTGCGGCTTACACAGCTTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945300       --> CTTTT-AAAGG--GAAGAAGGAAGCA---ACTGCGGCTTACACAGCTTAT  Raphanus sativus cv Early Scarlet Globe
FD574787       --> -TTTTTAAAGG--GAAGAAGGAAGCA---ACTGCGGCTTACACAGCTTAT  Raphanus sativus cv Early Scarlet Globe
EY910142       --> -TTT--AAAGG--GAAGAAGGAAGCAGCAACTGCGGCTTACACAGCTTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892597       --> -TTTTTAAAGG--GAAGAAGGAAGCA---ACTGCGGCTTACACAGCTTAT  Raphanus sativus var. oleiformis
FY449013       --> -TTTA-AAAGG--GAAGAAGGAAGCA---ACTGCGGCTTACACAGCTTAT  Raphanus sativus cv GSK3-1
EY896105       --> -TTTA-AAAGG--GAAGAAGGAAGCA---ACTGCGGCTTACACAGCTTAT  Raphanus raphanistrum subsp. maritimus
EY926434       --> -TTTTTAAAGG--GAGGAAGGAAGCA---ACTGCGGCTTACACAGCTTAT  Raphanus sativus var. oleiformis
FD530236       --> -TTTA-AAAGG--GAAGAAGGAAGCA---ACTGCGGCTTACACAGCTTAT  Raphanus raphanistrum subsp. maritimus
FY442208       --> -TTTA-AAAGG--GAAGAAGGAAGCA---ACTGCGGCTTACACAGCTTAT  Raphanus sativus cv GSK3-1
EW719650       --> -TTTTTAAAGG--GAAGAAGGAAGCA---ACTGCGGCTTACACAGCTTAT  Raphanus sativus var. oleiformis
EY894067       --> aaTTT-AAAGG--GAAGAAGGAAGCAGCAACTGCGGCTTACACAGCTTAT  Raphanus raphanistrum subsp. maritimus
FY445741       --> ..................................................  Raphanus sativus cv GSK3-1

               251    -    301
UN23494        --> GAATCCCGACCAAGCCATTGATGAACGAACATCTCAAGCCTCATCGTACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- GAATCC-GACCAAGCCATTGATGAACGAACATCTCAAGCCTCATCGTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX898090       <-- GAATCCCGACCAAGACATTGATGAACGAACATCTCAAGCCTCATCGTACT  Raphanus sativus cv Early Scarlet Globe
EY914014       <-- GAATCC-GACCAAGCCATTAATGAACGAACACCTCAAGCCTCATCGTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD542607       <-- GAATCCCGACCAAGCCATTGATGAACGAACATCTCAAGCCTCATCGTACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900604       <-- GAATCCTGACCAAGCCATTGATGAACGAACATCTCAAGCCTCATCGTACT  Raphanus raphanistrum subsp. maritimus
EY930178       <-- GAATCCCGACCAAGCCATTGATGAACAAACATCTCAAGCCTCATCGTACT  Raphanus sativus var. oleiformis
FD561714       <-- GAATCCCGACCAAGCCATTGATGAACAAACATCTCAAGCCTCATCGTACT  Raphanus sativus var. oleiformis
EW714533       <-- GAATCCCGACCAAGCCATTGATGAACAAACATCTCAAGCCTCATCGTACT  Raphanus sativus var. oleiformis
EY913299       <-- GAATCC-GACCAAGCCATTGATGAACGAACATCTCAAGCCTCATCGTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY443448       <-- GAATCCCGACCAAGACATTGATGAACGAACATCTCAAGCCTCATCGTACT  Raphanus sativus cv GSK3-1
FD949684       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY915939       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570849       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX747868       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY897863       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV536690       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450227       <-- ..................................................  Raphanus sativus cv GSK3-1
EV535353       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954084       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD534245       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV546785       --> GAATCC-GACCAAGCCATTGATGAACGAACATCTCAAGCCTCATCGTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540060       --> GAATCC-GACCAAGCCATTGATGAACGAACATCTCAAGCCTCATCGTACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909555       --> GAATCC-GACCAAGCCATTGATGAACGAACATCTCAAGCCTCATCGTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751955       --> GAATCC-GACCAAGCCATTGATGAACGAACATCTCAAGCCTCATCGTACT  Raphanus raphanistrum subsp. maritimus
EV541079       --> GAATCCCGACCAAGCCATTGATGAACGAACATCTCAAGCCTCATCGTACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720392       --> GAATCCCGACCAAGCCATTGATGAACAAACATCTCAAGCCTCATCGTACT  Raphanus sativus var. oleiformis
EX901720       --> GAATCCCGACCAAGACATTGATGAACGAACATCTCAAGCCTCATCGTACT  Raphanus sativus cv Early Scarlet Globe
EY911696       --> GAATCC-GACCAAGCCATTGATGAACGAACATCTCAAGCCTCATCGTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538635       --> GAATCCCGACCAAGCCATTGATGAACGAACATCTCAAGCCTCATCGTACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945300       --> GAATCCCGACCAAGCCATTGATGAACAAACATCTCAAGCCTCATCGTACT  Raphanus sativus cv Early Scarlet Globe
FD574787       --> GAATCCCGACCAAGCCATTGATGAACAAACATCTCAAGCCTCATCGTACT  Raphanus sativus cv Early Scarlet Globe
EY910142       --> GAATCC-GACCAAGCCATTAATGAACGAACACCTCAAGCCTCATCGTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892597       --> GAATCCCGACCAAGCCATTGATGAACAAACATCTCAAGCCTCATCGTACT  Raphanus sativus var. oleiformis
FY449013       --> GAATCCCGACCAAGACATTGATGAACGAACATCTCAAGCCTCATCGTACT  Raphanus sativus cv GSK3-1
EY896105       --> GAATCCTGACCAAGCCATTGATGAACGAACATCTCAAGCCTCATCGTACT  Raphanus raphanistrum subsp. maritimus
EY926434       --> GAATCCCGACCAAGCCATTGATGAACAAACATCTCAAGCCTCATCGTACT  Raphanus sativus var. oleiformis
FD530236       --> GAATCCTGACCAAGCCATTGATGAACGAACATCTCAAGCCTCATCGTACT  Raphanus raphanistrum subsp. maritimus
FY442208       --> GAATCCCGACCAAGACATTGATGAACGAACATCTCAAGCCTCATCGTACT  Raphanus sativus cv GSK3-1
EW719650       --> GAATCCCGACCAAGCCATTGATGAACAAACATCTCAAGCCTCATCGTACT  Raphanus sativus var. oleiformis
EY894067       --> GAATCC-GACCAAGCCATTGATGAACGAACATCTCAAGCCTCATCGTACT  Raphanus raphanistrum subsp. maritimus
FY445741       --> ..................................................  Raphanus sativus cv GSK3-1

               301    -    351
UN23494        --> CCTCTTCTTCATCCTCGTACTCCTCTTCACCGGCTGTAGCATCCTGGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- CCTCTTCTTCATCCTCGTACTCCTCTTCACCGGCTGTAGCATCCTGGTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX898090       <-- CCTCTTCTTCATCCTCGTACTCCTCTTCACCGGCCGTAGCATCCTGGTAC  Raphanus sativus cv Early Scarlet Globe
EY914014       <-- CCTCTTCTTCATCCTCGTACTCCTCTTCACCGGCTGTAGCATCCTGGTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD542607       <-- CCTCTTCTTCATCCTCGTACTCCTCTTCACCGGCTGTAGCATCCTGGTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900604       <-- CCTCTTCTACATCCTCGTACTCCTCTTCACCGGCTGTAGCATCCTGGTAC  Raphanus raphanistrum subsp. maritimus
EY930178       <-- CCTCTTCTTCATCCTCGTACTCCTCTTCACCGGCTGTAGCATCCTGGTAC  Raphanus sativus var. oleiformis
FD561714       <-- CCTCTTCTTCATCCTCGTACTCCTCTTCACCGGCTGTAGCATCCTGGTAC  Raphanus sativus var. oleiformis
EW714533       <-- CCTCTTCTTCATCCTCGTACTCCTCTTCACCGGCTGTAGCATCCTGGTAC  Raphanus sativus var. oleiformis
EY913299       <-- CCTCTTCTTCATCCTCGTACTCCTCTTCACCGGCTGTAGCATCCTGGTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY443448       <-- CCTCTTCTTCATCCTCGTACTCCTCTTCACCGGCCGTAGCATCCTGGTAC  Raphanus sativus cv GSK3-1
FD949684       <-- ................................GCTGTAGCATC-T-GTAC  Raphanus sativus cv Early Scarlet Globe
EY915939       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570849       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX747868       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY897863       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV536690       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450227       <-- ..................................................  Raphanus sativus cv GSK3-1
EV535353       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954084       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD534245       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV546785       --> CCTCTTCTTCATCCTCGTACTCCTCTTCACCGGCTGTAGCATCCTGGTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540060       --> CCTCTTCTTCATCCTCGTACTCCTCTTCACCGGCTGTAGCATCCTGGTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909555       --> CCTCTTCTTCATCCTCGTACTCCTCTTCACCGGCTGTAGCATCCTGGTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751955       --> CCTCTTCTTCATCCTCGTACTCCTCTTCACCGGCTGTAGCATCCTGGTAC  Raphanus raphanistrum subsp. maritimus
EV541079       --> CCTCTTCTTCATCCTCGTACTCCTCTTCACCGGCTGTAGCATCCTGGTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720392       --> CCTCTTCTTCATCCTCGTACTCCTCTTCACCGGCTGTAGCATCCTGGTAC  Raphanus sativus var. oleiformis
EX901720       --> CCTCTTCTTCATCCTCGTACTCCTCTTCACCGGCCGTAGCATCCTGGTAC  Raphanus sativus cv Early Scarlet Globe
EY911696       --> CCTCTTCTTCATCCTCGTACTCCTCTTCACCGGCTGTAGCATCCTGGTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538635       --> CCTCTTCTTCATCCTCGTACTCCTCTTCACCGGCTGTAGCATCCTGGTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945300       --> CCTCTTCTTCATCCTCGTACTCCTCTTCACCGGCTGTAGCATCCTGGTAC  Raphanus sativus cv Early Scarlet Globe
FD574787       --> CCTCTTCTTCATCCTCGTACTCCTCTTCACCGGCTGTAGCATCCTGGTAC  Raphanus sativus cv Early Scarlet Globe
EY910142       --> CCTCTTCTTCATCCTCGTACTCCTCTTCACCGGCTGTAGCATCCTGGTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892597       --> CCCCTTCTTCATCCTCGTACTCCTCTTCACCGGCTGTAGCATCCTGGTAC  Raphanus sativus var. oleiformis
FY449013       --> CCTCTTCTTCATCCTCGTACTCCTCTTCACCGGCCGTAGCATCCTGGTAC  Raphanus sativus cv GSK3-1
EY896105       --> CCTCTTCTACATCCTCGTACTCCTCTTCACCGGCTGTAGCATCCTGGTAC  Raphanus raphanistrum subsp. maritimus
EY926434       --> CCTCTTCTTCATCCTCGTACTCCTCTTCACCGGCTGTAGCATCCTGGTAC  Raphanus sativus var. oleiformis
FD530236       --> CCTCTTCTTCATCCTCGTACTCCTCTTCACCGGCTGTAGCATCCTGGTAC  Raphanus raphanistrum subsp. maritimus
FY442208       --> CCTCTTCTTCATCCTCGTACTCCTCTTCACCGGCCGTAGCATCCTGGTAC  Raphanus sativus cv GSK3-1
EW719650       --> CCTCTTCTTCATCCTCGTACTCCTCTTCACCGGCTGTAGCATCCTGGTAC  Raphanus sativus var. oleiformis
EY894067       --> CCTCTTCTTCATCCTCGTACTCCTCTTCACCGGCTGTAGCATCCTGGTAC  Raphanus raphanistrum subsp. maritimus
FY445741       --> ..................................................  Raphanus sativus cv GSK3-1

               351    -    401
UN23494        --> TGCTGATACTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- TGCTGATACTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX898090       <-- TGCTGATATTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA  Raphanus sativus cv Early Scarlet Globe
EY914014       <-- TGCTGATACTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD542607       <-- TGCTGATACTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900604       <-- TGCTGATACTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA  Raphanus raphanistrum subsp. maritimus
EY930178       <-- TGCTGATACTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA  Raphanus sativus var. oleiformis
FD561714       <-- TGCTGATACTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA  Raphanus sativus var. oleiformis
EW714533       <-- TGCTGGTACTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA  Raphanus sativus var. oleiformis
EY913299       <-- TGCTGATACTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY443448       <-- TGCTGATATTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA  Raphanus sativus cv GSK3-1
FD949684       <-- TGCTGATACTCTGCAACGAGATCATTCATGT-ACTCTCAGCT-CCGTGAA  Raphanus sativus cv Early Scarlet Globe
EY915939       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570849       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX747868       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY897863       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV536690       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450227       <-- ..................................................  Raphanus sativus cv GSK3-1
EV535353       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954084       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD534245       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV546785       --> TGCTGATACTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540060       --> TGCTGATACTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909555       --> TGCTGATACTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751955       --> TGCTGATACTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA  Raphanus raphanistrum subsp. maritimus
EV541079       --> TGCTGATACTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720392       --> TGCTGATACTCTGCgttga...............................  Raphanus sativus var. oleiformis
EX901720       --> TGCTGATATTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA  Raphanus sativus cv Early Scarlet Globe
EY911696       --> TGCTGATACTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538635       --> TGCTGATACTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945300       --> TGCTGATACTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA  Raphanus sativus cv Early Scarlet Globe
FD574787       --> TGCTGATACTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA  Raphanus sativus cv Early Scarlet Globe
EY910142       --> TGCTGATACTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892597       --> TGCTGGTACTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA  Raphanus sativus var. oleiformis
FY449013       --> TGCTGATATTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA  Raphanus sativus cv GSK3-1
EY896105       --> TGCTGATACTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA  Raphanus raphanistrum subsp. maritimus
EY926434       --> TGCTGATACTCTGCAACGAGATCATTCATGTTACTCTCAACTTCCGTGAA  Raphanus sativus var. oleiformis
FD530236       --> TGCTGATACTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA  Raphanus raphanistrum subsp. maritimus
FY442208       --> TGCTGATATTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA  Raphanus sativus cv GSK3-1
EW719650       --> TGCTGGTACTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA  Raphanus sativus var. oleiformis
EY894067       --> TGCTGATACTCTGCAACGAGATCATTCATGTTACTCTCAGCTTCCGTGAA  Raphanus raphanistrum subsp. maritimus
FY445741       --> ..................................................  Raphanus sativus cv GSK3-1

               401    -    451
UN23494        --> CTCCATCTCGTCCATGCCTTCTCCTGTGTACCAATGAAGGAAAGCCTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- CTCCATCTCGTCCATGCCTTCTCCTGTGTACCAATGAAGGAAAGCCTTTC
EX898090       <-- CTCCATCTCGTCCATGCCTTCTCCTGTGTACCAATGAAGGAAAGCCTTTC
EY914014       <-- CTCCATCTCGTCCATGCCTTCTCCTGTGTACCAATGAAGGAAAGCCTTTC
FD542607       <-- CTCCATCTCGTCCATGCCTTCTCCTGTGTACCAATGAAGGAAAGCCTTTC
EY900604       <-- CTCCATCTCGTCCATGTCTTCTCCTGTGTACCAATGAAGGAAAGCCTTTC
EY930178       <-- CTCCATCTCGTCCATGCCTTCTCCTGTGTACCAATGAAGGAAAGCCTTTC
FD561714       <-- CTCCATCTCGTCCATGCCTTCTCCTGTGTACCAATGAAGGAAAGCCTTTC
EW714533       <-- CTCCATCTCGTCCATGCCTTCTCCTGTGTACCAATGAAGGAAAGCCTTTC
EY913299       <-- CTCCATCTCGTCCATGCCTTCTCCTGTGTACCAATGAAGGAAAGCCTTTC
FY443448       <-- CTCCATCTCGTCCATGCCTTCTCCTGTGTACCAATGAAGGAAAGCCTTTC
FD949684       <-- CTCCATCTCGTCCATG----CCTCTGTGTACCAATGAAGGAAAGC-TTTC
EY915939       <-- ..................................................
FD570849       <-- ..................................................
EX747868       <-- ..................................................
EY897863       <-- ..................................................
EV536690       <-- ..................................................
FY450227       <-- ..................................................
EV535353       <-- ..................................................
FD954084       <-- ..................................................
FD534245       <-- ..................................................
EV546785       --> CTCCATCTCGTCCATGCCTTCTCCTGTGTACCAATGAAGGAAAGCCTTTC
EV540060       --> CTCCATCTCGTCCATGCCTTCTCCTGTGTACCAATGAAGGAAAGCCTTTC
EY909555       --> CTCCATCTCGTCCATGCCTTCTCCTGTGTACCAATGAAGGAAAGCCTTTC
EX751955       --> CTCCATCTCGTCCATGACTTCTCCTGTGTACCAATGAAGGAAAGCCTTTC
EV541079       --> CTCCATCTCGTCCATGCCTTCTCCTGTGTACCAATGAAGGAAAGCCTTTC
EW720392       --> ..................................................
EX901720       --> CTCCATCTCGTCCATGCCTTCTCCTGTGTACCAATGAAGGAAAGCCTTTC
EY911696       --> CTCCATCTCGTCCATGCCTTCTCCTGTGTACCAATGAAGGAAAGCCTTTC
FD538635       --> CTCCATCTCGTCCATGCCTTCTCCTGTGTACCAATGAAGGAAAGCCTTTC
FD945300       --> CTCCATCTCGTCCATGCC--CTCCTGTGTACCAATGAAGGAAAGCCTTTC
FD574787       --> CTCCATCTCGTCCATGCCTTCTCCTGTGTACCAATGAAGGAAAGCCTTTC
EY910142       --> CTCCATCTCGTCCATGCCTTCTCCTGTGTACCAATGAAGGAAAGCCTTTC
EX892597       --> CTCCATCTCGTCCATGCCTTCTCCTGTGTACCAATGAAGGAAAGCCTTTC
FY449013       --> CTCCATCTCGTCCATGCCTTCTCCTGTGTACCAATGAAGGAAAGCCTTTC
EY896105       --> CTCCATCTCGTCCATGTCTTCTCCTGTGTACCAATGAAGGAAAGCCTTTC
EY926434       --> CTCCATCTCGTCCATGCCTTCTCCTGTGTACCAATGAAGGAAAGCCTTTC
FD530236       --> CTCCATCTCGTCCATGCCTTCTCCTGTGTACCAATGAAGGAAAGCCTTTC
FY442208       --> CTCCATCTCGTCCATGCCTTCTCCTGTGTACCAATGAAGGAAAGCCTTTC
EW719650       --> CTCCATCTCGTCCATGCCTTCTCCTGTGTACCAATGAAGGAAAGCCTTTC
EY894067       --> CTCCA.............................................
FY445741       --> ..................................................

               451    -    501
UN23494        --> TCCTGAACATAGCTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- TCCTGAACATAGTTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
EX898090       <-- TCCTGAACATAGCTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
EY914014       <-- TCCTGAACATAGCTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
FD542607       <-- TCCTGAACATAGCTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
EY900604       <-- TCCTGAACATAGCTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
EY930178       <-- TCCTGAACATAGCTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
FD561714       <-- TCCTGAACATAGCTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
EW714533       <-- TCCTGAACATAGCTGTGAACTGTTCACTCACACGCCTGAACATTTCCTGG
EY913299       <-- TCCTGAACATAGTTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
FY443448       <-- TCCTGAACATAGCTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
FD949684       <-- TC-TGAACATAGCTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
EY915939       <-- ......ACATAGCTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
FD570849       <-- ......ACATAGCTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
EX747868       <-- ..................................................
EY897863       <-- ..................................................
EV536690       <-- ..................................................
FY450227       <-- ..................................................
EV535353       <-- ..................................................
FD954084       <-- ..................................................
FD534245       <-- ..................................................
EV546785       --> TCCTGAACATAGTTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
EV540060       --> TCCTGAACATAGCTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
EY909555       --> TCCTGAACATAGTTGTGAACTGTTCACTCACACCCCTGAACATCTCCTGG
EX751955       --> TCCTGAACATAGCTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
EV541079       --> TCCTGAACATAGCTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
EW720392       --> ..................................................
EX901720       --> TCCTGAACATAGCTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
EY911696       --> TCCTGAACATAGCTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
FD538635       --> TCCTGAACATAGCTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
FD945300       --> TCCTGAACATAGCTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
FD574787       --> TCCTGAACATAGCTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
EY910142       --> TCCTGAACATAGCTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
EX892597       --> TCCTGAACATAGCTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
FY449013       --> TCCTGAACATAGCTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
EY896105       --> TCCTGAACATAGCTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
EY926434       --> TCCTGAACATAGCTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
FD530236       --> TCCTGAACATAGCTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
FY442208       --> TCCTGAACATAGCTGTGAACTGTTCACTCACACGCCTGAACATCTCCTGG
EW719650       --> TCCTGAACATAGCTGTGAACTGTTCACTCACACGCCTGAACATTTCCTGG
EY894067       --> ..................................................
FY445741       --> ..................................................

               501    -    551
UN23494        --> ATTGAAGTTGAGTTCCCGATGAAAGTCGACGCCATTTTCAAACCCTTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- ATTGAAGTTGAGTTCCCGATGAAAGTCGACACCATTTTCAAACCCTTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX898090       <-- ATTGAAGTCGAGTTCCCGATGAAGGTAGACGCCATCTTCAAACCCTTGGG  Raphanus sativus cv Early Scarlet Globe
EY914014       <-- ATTGAAGTTGAGTTCCCGATGAAAGTCGACGCCATTTTCAAACCCTTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD542607       <-- ATTGAAGTTGGGTTCCCGATGAAAGTCGACGCCATCTTCAAACCCTTTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900604       <-- ATTGAAGTTGAGTTCCCGATGAAAGTCGACGCCATTTTCAAACCCTTGGG  Raphanus raphanistrum subsp. maritimus
EY930178       <-- ATTGAAGTCGAGTTCCCAATGAAAGTCGc.....................  Raphanus sativus var. oleiformis
FD561714       <-- ATTGAAGTCGAGTTCCCAATGAAAGTCGATGCCATCTTCAAACCCTTGGG  Raphanus sativus var. oleiformis
EW714533       <-- ATTGAAGTCGAGTTCCCGATGAAAGTCGATGCCATCTTCAAACCCTTCGG  Raphanus sativus var. oleiformis
EY913299       <-- ATTGAAGTTGAGTTCCCGATGAAAGTCGACACCATTTTCAAACCCTTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY443448       <-- ATTGAAGTCGAGTTCCCGATGAAGGTAGATGCCATCTTCAAACCCTTGGG  Raphanus sativus cv GSK3-1
FD949684       <-- ATTGAAGTTGAGTTCCCGATGAAAGTCGACGCCATTTTCAAACCCTTTGG  Raphanus sativus cv Early Scarlet Globe
EY915939       <-- ATTGAAGTTGAGTTCCCGATGAAAGTCGACGCCATTTTCAAACCCTTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570849       <-- ATTGAAGTTGAGTTCCCGATGAAAGTCGACGCCATTTTCAAACCCTTTGG  Raphanus sativus cv Early Scarlet Globe
EX747868       <-- .....tgagtgagTCCCGATGAAAGTCGACGCCATTT-C-AACCCTTTGG  Raphanus raphanistrum subsp. maritimus
EY897863       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV536690       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450227       <-- ..................................................  Raphanus sativus cv GSK3-1
EV535353       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954084       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD534245       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV546785       --> ATTGAAGTTGAGTTCCCGATGAAAGTCGACACCATTTTCAAACCCTTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540060       --> ATTGAAGTTGAGTTCCCGATGAAGGTAGATGCCATCTTCAAACCCTTTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909555       --> ATTGAAGTTGAGTTCCCGATGAAAGTCGACACCATTTTCAAACCCTTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751955       --> ATTGAAGTTGAGTTCCCGATGAAAGTCGACGCCATTTTCAAACCCTTTGG  Raphanus raphanistrum subsp. maritimus
EV541079       --> ATTGAAGTCGAGTTCCCGATGAAAGTCGACGCCATCTTCAAACCCTTTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720392       --> ..................................................  Raphanus sativus var. oleiformis
EX901720       --> ATTGAAGTCGAGTTCCCGATGAAGGTAGACGCCATCTTCAAACCCTTGGG  Raphanus sativus cv Early Scarlet Globe
EY911696       --> ATTGAAGTTGAGTTCCCGATGAAAGTCGACGCCATTTTCAAACCCTTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538635       --> ATTGAAGTTGGGTTCCCGATGAAAGTCGACGCCATCTTCAAACCCTTTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945300       --> ATTGAAGTTGAGTTCCCGATGAAAGTCGACGCCATTTTCAAACCCTTTGG  Raphanus sativus cv Early Scarlet Globe
FD574787       --> ATTGAAGTTGAGTTCCCGATGAAAGTCGACGCCATTTTCAAACCCTTTGG  Raphanus sativus cv Early Scarlet Globe
EY910142       --> ATTGAAGTTGAGTTCCCGATGAAAGTCGACGCCATTTTCAAACCCTTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892597       --> ATCGAAGTCGAGTTCCCGATGAAAGTCGATGCCATCTTCAAACCCTTCGG  Raphanus sativus var. oleiformis
FY449013       --> ATTGAAGTCGAGTTCCCGATGAAGGTAGATGCCATCTTCAAACCCTTGGG  Raphanus sativus cv GSK3-1
EY896105       --> ATTGAAGTTGAGTTCCCGATGAAAGTCGACGCCATTTTCAAACCCTTGGG  Raphanus raphanistrum subsp. maritimus
EY926434       --> ATTGAAGTCGAGTTCCCAATGAAAGTCGc.....................  Raphanus sativus var. oleiformis
FD530236       --> ATTGAAGTTGAGTTCCCGATGAAAGTCGACGCCATTTTCAAACCCTTGGG  Raphanus raphanistrum subsp. maritimus
FY442208       --> ATTGAAGTCGAGTTCCCGATGAAGGTAGATGCCATCTTCAAACCCTTGGG  Raphanus sativus cv GSK3-1
EW719650       --> ATTGAAGTCGAGTTCCCGATGAAAGTCGATGCCATCTTCAAACCCTTCGG  Raphanus sativus var. oleiformis
EY894067       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY445741       --> ..................................................  Raphanus sativus cv GSK3-1

               551    -    601
UN23494        --> TGCAATGTCACAGACGCTGGACTTAACATTGTTCGGGATCCATTCCACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- TGCAATGTCACAGACGCTGGACTTAACATTGTTCGGGATCCATTCCACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX898090       <-- TGCAATGCCACAGACGCTGGACTTAACATTGTTGGGGATCCATTCCACAA  Raphanus sativus cv Early Scarlet Globe
EY914014       <-- TGCAATGTCACAGACG-TGGACTTAACATTGTTCGGGATCCATTCCACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD542607       <-- TGCAATGTCACAGACGCTGGACTTGACATTGTTCGGGATCCATTCCACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900604       <-- TGCAATc...........................................  Raphanus raphanistrum subsp. maritimus
EY930178       <-- ..................................................  Raphanus sativus var. oleiformis
FD561714       <-- TGCAATGTCACAGACGCTGGACTTAACATTGTTCGGGATCCATTCCACAA  Raphanus sativus var. oleiformis
EW714533       <-- TGCAATGTCACAGACGCTGGACTTAACATTGTTCGGGATCCATTCCACAA  Raphanus sativus var. oleiformis
EY913299       <-- TGCAATGTCACAGACGCTGGACTTAACATTGTTCGGGATCCATTCCACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY443448       <-- TGCAATGTCACAGACGCTGGACTTAACATTGTTGGGGATCCATTCCACAA  Raphanus sativus cv GSK3-1
FD949684       <-- TGCAAAGTCACAGACGCTGGATTTAACATTGTTCGGGATCCATTCCACAA  Raphanus sativus cv Early Scarlet Globe
EY915939       <-- TGCAATGTCACAGACGCTGGACTTAGCATTGTTCGGGATCCATTCCACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570849       <-- TGCAATGTCACAGACGCTGGATTTAACATTGTTCGGGATCCATTCCACAA  Raphanus sativus cv Early Scarlet Globe
EX747868       <-- TGCAATGTCACAGACGCTGGACTTAACATTGTTCGGGATCCATTCCACAA  Raphanus raphanistrum subsp. maritimus
EY897863       <-- .........................ACATTGTTCGGGATCCATTCCACAA  Raphanus raphanistrum subsp. maritimus
EV536690       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450227       <-- ..................................................  Raphanus sativus cv GSK3-1
EV535353       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954084       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD534245       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV546785       --> TGCAATGTCACAGACGCTGGACTTAACATTGTTCGGGATCCATTCCACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540060       --> TGCAATGTCACAGACGCTGGACTTAACATTGTTGGGGATCCATTCCACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909555       --> TGCAATGTCACAAACGCTGGACTTAACATTGTTCGGGATCCATTCCACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751955       --> TGCAATGTCACAGACGCTGGACTTAACATTGTTCGGGATCCATTCCACAA  Raphanus raphanistrum subsp. maritimus
EV541079       --> TGCGATGTCACAGACGCTGGACTTGACATTGTTCGGGATCCATTCCACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720392       --> ..................................................  Raphanus sativus var. oleiformis
EX901720       --> TGCAATGCCACAGACGCTGGACTTAACATTGTTGGGGATCCATTCCACAA  Raphanus sativus cv Early Scarlet Globe
EY911696       --> TGCAATGTCACAGACGCTGGACTTAGCATTGTTCGGGATCCATTCCACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538635       --> TGCAATGTCACAGACGCTGGACTTGACATTGTTCGGGATCCATTCCACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945300       --> TGCAAAGTCACAGACGCTGGATTTAACATTGTTCGGGATCCATTCCACAA  Raphanus sativus cv Early Scarlet Globe
FD574787       --> TGCAATGTCACAGACGCTGGATTTAACATTGTTCGGGATCCATTCCACAA  Raphanus sativus cv Early Scarlet Globe
EY910142       --> TGCAATGTCACAGACG-TGGACTTAACATTGTTCGGGATCCATTCCACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892597       --> TGCAATGTCACAGACGCTGGACTTAACATTGTTCGGGATCCATTCCACAA  Raphanus sativus var. oleiformis
FY449013       --> TGCAATGTCACAGACGCTGGACTTAACATTGTTGGGGATCCATTCCACAA  Raphanus sativus cv GSK3-1
EY896105       --> TGCAATc...........................................  Raphanus raphanistrum subsp. maritimus
EY926434       --> ..................................................  Raphanus sativus var. oleiformis
FD530236       --> TGCAATGTCACAGACGCTGGACTTTACATTGTTCGGGATCCATTCCACAA  Raphanus raphanistrum subsp. maritimus
FY442208       --> TGCAATGTCACAGACGCTGGACTTAACATTGTTGGGGATCCATTCCACAA  Raphanus sativus cv GSK3-1
EW719650       --> TGCAATGTCACAGACGCTGGACTTAACATTGTTCGGGATCCATTCCACAA  Raphanus sativus var. oleiformis
EY894067       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY445741       --> ..................................................  Raphanus sativus cv GSK3-1

               601    -    651
UN23494        --> AGTAGGACGAGTTCTTGTTCTGGATGTTCATCATCTGCTCATCGACCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- AGTAGGATGAGTTCTTGTTCTGGATGTTCATCATCTGCTCATCGACCTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX898090       <-- AGTAGGACGAGTTCTTGTTATGGATGTTCATCATCTGCTCATCGc.....  Raphanus sativus cv Early Scarlet Globe
EY914014       <-- AGTAGGATGAGTTCTTGTTCTGGATGTTCATCATCTGCTCATCGACCTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD542607       <-- AGTAGGATGAGTTCTTGTTCTGGATGTTCATCATCTGCTCATCGACCTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900604       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY930178       <-- ..................................................  Raphanus sativus var. oleiformis
FD561714       <-- AGTAGGATGAGTTCTTGTTCTGGATGTTCATCATCTGCTCATCGACCTCC  Raphanus sativus var. oleiformis
EW714533       <-- AGTAGGACGAGTTCTTGTTCTGGATGTTCATCATCTGCTCATCGACCTCC  Raphanus sativus var. oleiformis
EY913299       <-- AGTAGGATGAGTTCTTGTTCTGGATGTTCATCATCTGCTCATCGACCTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY443448       <-- AGTAGGACGAGTTCTTGTTCTGGATGTTCATCATCTGCTCATCGACCTCC  Raphanus sativus cv GSK3-1
FD949684       <-- AGTAGGACGAGTTCCTGTTCTGGATGTTCATCATCTGCTCATCCACCTCC  Raphanus sativus cv Early Scarlet Globe
EY915939       <-- AGTAGGATGAGTTCTTGTTCTGGATGTTCATCATCTGCTCATCGACCTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570849       <-- AGTAGGACGAGTTCTTGTTCTGGATGTTCATCATCTGCTCATCCACCTCC  Raphanus sativus cv Early Scarlet Globe
EX747868       <-- AGTAGGACGAGTTCTTGTTCTGGATGTTCATCATCTGCTCATCGACCTCC  Raphanus raphanistrum subsp. maritimus
EY897863       <-- AGTAGGACGAGTTCTTGTTCTGGATGTTCATCATCTGCTCATCGACCTCC  Raphanus raphanistrum subsp. maritimus
EV536690       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450227       <-- ..................................................  Raphanus sativus cv GSK3-1
EV535353       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954084       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD534245       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV546785       --> AGTAGGATGAGTTCTTGTTCTGGATGTTCATCATCTGCTCATCGACCTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540060       --> AGTAGGATGAGTACTTGTTCTGGATGTTCATCATCTGCTCATCGACCTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909555       --> AGTAGGATGAGTTCTTGTTCTGGATGTTCATCATCTGCTCATCGACCTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751955       --> AGTAGGACGAGTTCTTGTTCTGGATGTTCATCATCTGCTCATCGACCTCC  Raphanus raphanistrum subsp. maritimus
EV541079       --> AGTAGGATGAGTTCTTGTTCTGGATGTTCGTCATCTGCTCATCGACCTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720392       --> ..................................................  Raphanus sativus var. oleiformis
EX901720       --> AGTAGGACGAGTTCTTGTTATGGATGTTCATCATCTGCTCATCGc.....  Raphanus sativus cv Early Scarlet Globe
EY911696       --> AGTAGGATGAGTTCTTGTTCTGGATGTTCATCATCTGCTCATCGACCTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538635       --> AGTAGGATGAGTTCTTGTTCTGGATGTTCATCATCTGCTCATCGACCTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945300       --> AGTAGGACGAGTTCCTGTTCTGGATGTTCATCATCTGCTCATCCACCTCC  Raphanus sativus cv Early Scarlet Globe
FD574787       --> AGTAGGACGAGTTCTTGTTCTGGATGTTCATCATCTGCTCATCCACCTCC  Raphanus sativus cv Early Scarlet Globe
EY910142       --> AGTAGGATGAGTTCTTGTTCTGGATGTTCATCATCTGCTCATCGACCTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892597       --> AGTAGGACGAGTTCTTGTTCTGGATGTTCATCATCTGCTCATCGACCTCC  Raphanus sativus var. oleiformis
FY449013       --> AGTAGGACGAGTTCTTGTTCTGGATGTTCATCATCTGCTCATCGACCTCC  Raphanus sativus cv GSK3-1
EY896105       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY926434       --> ..................................................  Raphanus sativus var. oleiformis
FD530236       --> AGTAGGACGAGTTCTTGTTCTGGATGTTCATCATCTGCTCATCGACCTCC  Raphanus raphanistrum subsp. maritimus
FY442208       --> AGTAGGACGAGTTCTTGTTCTGGATGTTCATCATCTGCTCATCGACCTCC  Raphanus sativus cv GSK3-1
EW719650       --> AGTAGGACGAGTTCTTGTTCTGGATGTTCATCATCTGCTCATCGACCTCC  Raphanus sativus var. oleiformis
EY894067       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY445741       --> ..................................................  Raphanus sativus cv GSK3-1

               651    -    701
UN23494        --> TTAGTGCTCAGCTTCCCACGGAACACAGCTGATGCAGTCAAGTAACGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- TTAGTGCTCAGCTTCCCACGGAACACAGCTGATGCAGTCAAGTAACGTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX898090       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY914014       <-- TTAGTGCTCAGCTTCCCACGGAACACAGCTGATGCAGTCAAGTAACGTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD542607       <-- TTAGTGCTCAGCTTCCCACGGAACACAGCTGATGCAGTTAAGTAACGTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900604       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY930178       <-- ..................................................  Raphanus sativus var. oleiformis
FD561714       <-- TTAGTGCTCAGCTTCCCACGGAACACAGCTGATGCAGTCAAGTAACGTCC  Raphanus sativus var. oleiformis
EW714533       <-- c.................................................  Raphanus sativus var. oleiformis
EY913299       <-- TTAGTGCTCAGCTTCCCACGGAACACAGCTGATGCAGTCAAGTAACGTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY443448       <-- TTAGTGCTCAGCTTCCCACGGAACACAGCTGATGCAGTCAAGTAACGTCC  Raphanus sativus cv GSK3-1
FD949684       <-- TTAGTGCTCAGCTTCCCACGGAACACAGCGGAAGCAGTCAAGTAACGTCC  Raphanus sativus cv Early Scarlet Globe
EY915939       <-- TTAGTGCTCAACTTCCCACGGAACACAGCTGATGCAGTCAAGTAACGTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570849       <-- TTAGTGCTCAGCTTCCCACGGAACACAGCGGAAGCAGTCAAGTAACGTCC  Raphanus sativus cv Early Scarlet Globe
EX747868       <-- TTAGTGCTCAGCTTCCCACGGAACACAGCGGAAGCAGTTAAGTAACGCCC  Raphanus raphanistrum subsp. maritimus
EY897863       <-- TTAGTGCTCAGCTTCCCACGGAACACAGCGGAAGCAGTTAAGTAACGTCC  Raphanus raphanistrum subsp. maritimus
EV536690       <-- .....GCTCAGCTTCCCACGGAACACAGCTGATGCAGTTAAGTAACGTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450227       <-- ..................................................  Raphanus sativus cv GSK3-1
EV535353       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954084       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD534245       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV546785       --> TTAGTGCTCAGCTTCCCACGGAACACAGCTGATGCAGTCAAGTAACGTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540060       --> TTAGTGCTCAGCTTCCCACGGAACACAGCGGAAGCAGTCAAGTAACGTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909555       --> TT................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751955       --> TTAGTGCTCAGCTTCCCACGGAACACAGCGGAAGCAGTTAAGTAACGCCC  Raphanus raphanistrum subsp. maritimus
EV541079       --> TTAGTGCTCAGCTTCCCACGGAACACAGCTGATGCAGTTAAGTAACGTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720392       --> ..................................................  Raphanus sativus var. oleiformis
EX901720       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY911696       --> TTAGTGCTCAACTTCCCACGGAACACAGCTGATGCAGTCAAGTAACGTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538635       --> TTAGTGCTCAGCTTCCCACGGAACACAGCTGATGCAGTTAAGTAACGTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945300       --> TTAGTGCTCAGCTTCCCACGGAACACAGCGGAAGCAGTCAAGTAACGTCC  Raphanus sativus cv Early Scarlet Globe
FD574787       --> TT................................................  Raphanus sativus cv Early Scarlet Globe
EY910142       --> TTAGTGCTCAGCTTCCCACGGAACACAGCTGATGCAGTCAAGTAACGTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892597       --> TTAGTGCTCAGCTTCCCACGGAACACAGCTGATGCAGTCAAGTAACGTCC  Raphanus sativus var. oleiformis
FY449013       --> TTAGTGCTCAGCTTCCCACGGAACACAGCTGATGCAGTCAAGTAACGTCC  Raphanus sativus cv GSK3-1
EY896105       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY926434       --> ..................................................  Raphanus sativus var. oleiformis
FD530236       --> TTAGTGCTCAGCTTCCCACGGAACACAGCGGAAGCAGTTAAGTAACGTCC  Raphanus raphanistrum subsp. maritimus
FY442208       --> TTAGTGCTCAGCTTCCCACGGAACACAGCTGATGCAGTCAAGTAACGTCC  Raphanus sativus cv GSK3-1
EW719650       --> c.................................................  Raphanus sativus var. oleiformis
EY894067       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY445741       --> ..................................................  Raphanus sativus cv GSK3-1

               701    -    751
UN23494        --> GTGACGAGGGTCAGCAGCGCACATCATGTTCTTTGCATCCCACATCTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- GTGACGAGGGTCAGCAGCGCACATCATGTTCTTTGCATCCCACATCTGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX898090       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY914014       <-- GTGACGAGGGTCAGCAGCGCACATCATGTTCTTTGCc.............  Raphanus raphanistrum subsp. raphanistrum (NY)
FD542607       <-- GTGACGAGGGTCAGCAGCGCACATCATGTTCTTTGCATCCCACATCTGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900604       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY930178       <-- ..................................................  Raphanus sativus var. oleiformis
FD561714       <-- GTGACGAGGGTCAGCAGCGCACATCATGTTCTTCGCATCCCACATCTGCT  Raphanus sativus var. oleiformis
EW714533       <-- ..................................................  Raphanus sativus var. oleiformis
EY913299       <-- GTGACGAGGGTCAGCAGCGCACATCATGTTCTTTGCATCCCACATCTGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY443448       <-- GTGACGAGGGTCAGCAGCGCACATCATGTTCTTTGCATCCCACATCTGCT  Raphanus sativus cv GSK3-1
FD949684       <-- GTGACGAGGGTCAGCAGCGCACATCATGTTCTTCGCATCCCACATCTGCT  Raphanus sativus cv Early Scarlet Globe
EY915939       <-- GTGACGAGGGTCAGCAGCGCACATCATGTTCTTTGCATCCCACATCTGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570849       <-- GTGACGAGGGTCAGCAGCGCACATCATGTTCTTCGCATCCCACATCTGCT  Raphanus sativus cv Early Scarlet Globe
EX747868       <-- GTGGCGAGGGTCAGCAGCGCACATCATGTTCTTCGCATCCCACATCTGCT  Raphanus raphanistrum subsp. maritimus
EY897863       <-- GTGGCGAGGGTCAGCAGCGCACATCATGTTCTTCGCATCCCACATCTGCT  Raphanus raphanistrum subsp. maritimus
EV536690       <-- GTGACGAGGGTCAGCAGCGCACATCATGTTCTTTGCATCCCACATCTGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450227       <-- ..................................................  Raphanus sativus cv GSK3-1
EV535353       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954084       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD534245       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV546785       --> GTGACGAGGGTCAGCAGCGCACATCATGTTCTTTGCATCCCACATCTGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540060       --> GTGGCGAGGGTCAGCAGCGCACATCATGTTCTTTGCATCCCACATCTGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909555       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751955       --> GTGGCGAGGGTCAGCAGCGCACATCATGTTCTTCGCATCCCACATCTGCT  Raphanus raphanistrum subsp. maritimus
EV541079       --> GTGACGAGGGTCAGCAGCGCACATCATGTTCTTTGCATCCCACATCTGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720392       --> ..................................................  Raphanus sativus var. oleiformis
EX901720       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY911696       --> GTGACGAGGGTCAGCAGCGCACATCATGTTCTTTGCATCCCACATCTGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538635       --> GTGACGAGGGTCAGCAGCGCACATCATGTTCTTTGCATCCCACATCTGC.  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945300       --> GTGACGAGGGTCAGCAGCGCACATCATGTTCTTCGCATCCCACATCTGCT  Raphanus sativus cv Early Scarlet Globe
FD574787       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY910142       --> GTGACGAGGGTCAGCAGCGCACATCATGTTCTTTGCc.............  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892597       --> GTGACGAGGGTCAGCAGCGCACATCATGTTCTTTGCATCCCACATCTGCT  Raphanus sativus var. oleiformis
FY449013       --> GTGACGAGGGTCAGCAGCGCACATCATGTTCTTTGCATCCCACATCTGCT  Raphanus sativus cv GSK3-1
EY896105       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY926434       --> ..................................................  Raphanus sativus var. oleiformis
FD530236       --> GTGGTGAGGGTCAGCAGCGCACATCATGTTCTTCGCATCCCACATCTGCT  Raphanus raphanistrum subsp. maritimus
FY442208       --> GTGACGAGGGTCAGCAGCGCACATCATGTTCTTTGCATCCCACATCTGCT  Raphanus sativus cv GSK3-1
EW719650       --> ..................................................  Raphanus sativus var. oleiformis
EY894067       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY445741       --> ..................................................  Raphanus sativus cv GSK3-1

               751    -    801
UN23494        --> GGGTCAGTTCAGGGACACTCAAGGCACTGTATTGCTGTGAACCTCTTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- GGGTCAGTTCAGGGACACTCAAGGCACTGTATTGCTGTGAACCCCTCGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX898090       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY914014       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD542607       <-- GGGTGAGTTCAGGGACACTCAAGGCACTGTACTGCTGTGAACCTCTGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900604       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY930178       <-- ..................................................  Raphanus sativus var. oleiformis
FD561714       <-- GGGTCAGTTCAGGGAC..................................  Raphanus sativus var. oleiformis
EW714533       <-- ..................................................  Raphanus sativus var. oleiformis
EY913299       <-- GGGTCAGTTCAGGGACACTCAAGGCACTGTATTGCTGTGAACCCCTCGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY443448       <-- GGGTCAGCTCAGGGACACTCAAGGCACTGTATTGCTGTGAACCTCTTGAC  Raphanus sativus cv GSK3-1
FD949684       <-- GGGTCAGCTCAGGGACACTCAAGGCACTGTATTGCTGTGAACCTCTTGAC  Raphanus sativus cv Early Scarlet Globe
EY915939       <-- GGGTCAGTTCAGGGACACTCAAGGCACTGTATTGCTGTGAACCCCTCGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570849       <-- GGGTCAGCTCAGGGACACTCAAGGCACTGTATTGCTGTGAACCTCTTGAC  Raphanus sativus cv Early Scarlet Globe
EX747868       <-- GGGTCAGTTCAGGGACACTCAAGGCACTGTACTGCTGTGAACCCCTCGAT  Raphanus raphanistrum subsp. maritimus
EY897863       <-- GGGTCAGTTCAGGGACACTCAAGGCACTGTACTGCTGTGAACCCCTCGAT  Raphanus raphanistrum subsp. maritimus
EV536690       <-- GGGTGAGTTCAGGGACACTCAAGGCACTGTACTGCTGTGAACCTCTGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450227       <-- ..................................................  Raphanus sativus cv GSK3-1
EV535353       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954084       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD534245       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV546785       --> GGGTCAGT..........................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540060       --> GGGTgagc..........................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909555       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751955       --> GGGTCAG...........................................  Raphanus raphanistrum subsp. maritimus
EV541079       --> GGG...............................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720392       --> ..................................................  Raphanus sativus var. oleiformis
EX901720       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY911696       --> GGGTCAGTTCAGGGACACTCAAGGCACTGTATTGCTGTGAACCCCTCGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538635       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945300       --> GGGTCAGCTCAGGGACACTCAAGGCACTGTATTGCTGTGAACCTCTTGAC  Raphanus sativus cv Early Scarlet Globe
FD574787       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY910142       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892597       --> GGGTCAGTTCAGGGACACTCAAGGCACTGTATTGCTGAGAACCTCTGGAT  Raphanus sativus var. oleiformis
FY449013       --> GGGTCAGCTCAGGGACACTCAAGGCACTGTATTGCTGTGAACCTCTTGAC  Raphanus sativus cv GSK3-1
EY896105       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY926434       --> ..................................................  Raphanus sativus var. oleiformis
FD530236       --> GGGTCAGT..........................................  Raphanus raphanistrum subsp. maritimus
FY442208       --> GGGTCAGCTCAGGGACACTCAAGGCACTGTATTGCTGTGAACCTCTTGAC  Raphanus sativus cv GSK3-1
EW719650       --> ..................................................  Raphanus sativus var. oleiformis
EY894067       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY445741       --> ..................................................  Raphanus sativus cv GSK3-1

               801    -    851
UN23494        --> GTCAACGGAGCAAAACCCACCATGAAGAAGTGGAGCCTTGGGAAAGGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- GTCAAGGGAGCAAAACCCACCATGAAGAAGTGGAGCCTTGGGAAAGGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX898090       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY914014       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD542607       <-- GTCAACGGAGCAAAACCCACCATGAAGAAGTGGAGCCc............  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900604       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY930178       <-- ..................................................  Raphanus sativus var. oleiformis
FD561714       <-- ..................................................  Raphanus sativus var. oleiformis
EW714533       <-- ..................................................  Raphanus sativus var. oleiformis
EY913299       <-- GTCAAGGGAGCAAAACCCACCATGAAGAAGTGGAGCCTTGGGAAAGGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY443448       <-- GTCAACGGAGCAAAACCCACCATGAAGAAGTGGAGCCTTGGGAAAGGGAT  Raphanus sativus cv GSK3-1
FD949684       <-- GTCAACGGAGCAAAACCCACCATGAAGAAGTGGAGCCTTGGGAAAGGGAT  Raphanus sativus cv Early Scarlet Globe
EY915939       <-- GTCAAGGGAGCAAAACCCACCATGAAGAAGTGGAGCCTTGGGAAAGGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570849       <-- GTCAACGGAGCAAAACCCACCATGAAGAAGTGGAGCCTTGGGAAAGGGAT  Raphanus sativus cv Early Scarlet Globe
EX747868       <-- GTCAACGGAGCAAAACCCACCATGAAGAAGTGGAGCCTTGGGAAAGGGAT  Raphanus raphanistrum subsp. maritimus
EY897863       <-- GTCAACGGAGCAAAACCCACCATGAAGAAGTGGAGCCTTGGGAAAGGGAT  Raphanus raphanistrum subsp. maritimus
EV536690       <-- GTCAACGGAGCAAAACCCACCATGAAGAAGTGGAGCCTTGGGAAAGGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450227       <-- .TCAACGGAGCAAAACCCACCATGAAGAAGTGGAGCCTTGGGAAAGGGAT  Raphanus sativus cv GSK3-1
EV535353       <-- ..........................................AAAGGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954084       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD534245       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV546785       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540060       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909555       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751955       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV541079       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720392       --> ..................................................  Raphanus sativus var. oleiformis
EX901720       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY911696       --> GT................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538635       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945300       --> GTCAACGGAGCAAAACCCACCATGAAGAAGTGGAGCCTTGGGAAAGGGAT  Raphanus sativus cv Early Scarlet Globe
FD574787       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY910142       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892597       --> GTCAACGGAGCAAAACCCACCATGAAGAAGTGGAGCCT............  Raphanus sativus var. oleiformis
FY449013       --> GTCAACGGAGCAAAACCCACCATGAAGAAGTGGAGCCTTGGGAAAGGGAT  Raphanus sativus cv GSK3-1
EY896105       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY926434       --> ..................................................  Raphanus sativus var. oleiformis
FD530236       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY442208       --> GTCAACGGAGCAAAACCCACCATGAAGAAGTGGAGCCTTGGGAAAGGGAT  Raphanus sativus cv GSK3-1
EW719650       --> ..................................................  Raphanus sativus var. oleiformis
EY894067       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY445741       --> ...cACGGAGCAAA-CCCACCATGAAGAAGTGGAGCCTTGGGAAAGGGAT  Raphanus sativus cv GSK3-1

               851    -    901
UN23494        --> GAGGTTCACAGCGAGCTTCCTAAGGTCAGAGTTGAGTT-GACCAGGGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- CAGGTTCACAGCGAGCTTCCTAAGGTCAGAGTTGAGTT-GACCGGGGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX898090       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY914014       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD542607       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900604       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY930178       <-- ..................................................  Raphanus sativus var. oleiformis
FD561714       <-- ..................................................  Raphanus sativus var. oleiformis
EW714533       <-- ..................................................  Raphanus sativus var. oleiformis
EY913299       <-- CAGGTTCACAGCGAGCTTCCTAAGGTCAGAGTTGAGTT-GACCGGGGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY443448       <-- GAGGTTCACAGCGAGCTTCCTAAGGTCAGAGTTGAGTT-GACCAGGGAAA  Raphanus sativus cv GSK3-1
FD949684       <-- GAGGTTCACAGCGAGCTTCCTAAGGTCAGAGTTGAGTT-GACCAGGGAAA  Raphanus sativus cv Early Scarlet Globe
EY915939       <-- CAGGTTCACAGCGAGCTTCCTAAGGTCAGAGTTGAGTT-GACCAGGGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570849       <-- GAGGTTCACAGCGAGCTTCCTAAGGTCAGAGTTGAGTT-GACCAGGGAAA  Raphanus sativus cv Early Scarlet Globe
EX747868       <-- GAGGTTCACAGCGAGCTTCCTAAGGTCAGAGTTGAGTT-GACCAGGGAAA  Raphanus raphanistrum subsp. maritimus
EY897863       <-- GAGGTTCACAGCGAGCTTCCTAAGGTCAGAGTTGAGTT-GACCAGGGAAA  Raphanus raphanistrum subsp. maritimus
EV536690       <-- CAGGTTCACAGCGAGCTTCCTAAGGTCAGAGTTGAGTT-GACCAGGGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450227       <-- GAGGTTCACAGCGAGCTTCCTAAGGTCAGAGT-GAGTTTGACCAGGGAAA  Raphanus sativus cv GSK3-1
EV535353       <-- GAGGTTCACAGCGAGCTTC-TAAGGTCAGAGTTGAGTT-GACCAGGGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954084       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD534245       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV546785       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540060       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909555       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751955       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV541079       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720392       --> ..................................................  Raphanus sativus var. oleiformis
EX901720       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY911696       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538635       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945300       --> GAGGTTCACAGCGAGCT.................................  Raphanus sativus cv Early Scarlet Globe
FD574787       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY910142       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892597       --> ..................................................  Raphanus sativus var. oleiformis
FY449013       --> GAGGTTCACAGCGAGCTTCCTAAGGTCAGAGTTGAGTT-GACCAGGGAAA  Raphanus sativus cv GSK3-1
EY896105       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY926434       --> ..................................................  Raphanus sativus var. oleiformis
FD530236       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY442208       --> GAGGTTCACAGCGAGCTTCCTAAGGTCAGAGTTGAGTT-GACCAGGGAAA  Raphanus sativus cv GSK3-1
EW719650       --> ..................................................  Raphanus sativus var. oleiformis
EY894067       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY445741       --> GAGGTTCACAGCGAGCTTCCTAAGGTCAGAGTTGAGTT-GACCAGGGAAA  Raphanus sativus cv GSK3-1

               901    -    951
UN23494        --> CGAAGACAGCATGTAACACCACTCATTGTAGCCGAGATGAGATGGTTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- CGAAGcc...........................................
EX898090       <-- ..................................................
EY914014       <-- ..................................................
FD542607       <-- ..................................................
EY900604       <-- ..................................................
EY930178       <-- ..................................................
FD561714       <-- ..................................................
EW714533       <-- ..................................................
EY913299       <-- CGA...............................................
FY443448       <-- CGAAGACAGCATGTAACACCACTCATTGTAGCCGAGATGAGATGGTTAAG
FD949684       <-- CGAAGACAGCATGTAACACCACTCATTGTAGCCGAGATGAGATGGTTAAG
EY915939       <-- CGAAGACAGCATGTAACACCACTCATTGTAGCCGAGATGAGATGGTTAAG
FD570849       <-- CGAAGACAGCATGTAACACCACTCATTGTAGCCGAGATGAGATGGTTAAG
EX747868       <-- CGAAGACAGCATGTAACACCACTCATTGTAGCCGAGATGAGGTGGTTAAG
EY897863       <-- CGAAGACAGCATGTAACACCACTCATTGTAGCCGAGATGAGGTGGTTAAG
EV536690       <-- CGAAGACAGCATGTAACACCACTCATTGTTGCCGAGATGAGATGGTTAAG
FY450227       <-- CGAAGACAGCATGTAACACCACTCATTGTAGCCGAGATGAGATGGTTAAG
EV535353       <-- CGAAGACAGCATGTAACACCACTCATTGTAGCCGAGATGAGATGGTTAAG
FD954084       <-- ..................................................
FD534245       <-- ..................................................
EV546785       --> ..................................................
EV540060       --> ..................................................
EY909555       --> ..................................................
EX751955       --> ..................................................
EV541079       --> ..................................................
EW720392       --> ..................................................
EX901720       --> ..................................................
EY911696       --> ..................................................
FD538635       --> ..................................................
FD945300       --> ..................................................
FD574787       --> ..................................................
EY910142       --> ..................................................
EX892597       --> ..................................................
FY449013       --> CGAAG.............................................
EY896105       --> ..................................................
EY926434       --> ..................................................
FD530236       --> ..................................................
FY442208       --> CGAAGACAGCATGTAACACCACTCATTGTAGC..................
EW719650       --> ..................................................
EY894067       --> ..................................................
FY445741       --> CGAAGACAGCATGTAACACCACTCATTGTAGCCGAGATGAGATGGTTAAG

               951    -   1001
UN23494        --> ATCACCAAAAGAGGGGTTAGAAAGCTTGAGGGTACGGAAGCAGATGTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- ..................................................
EX898090       <-- ..................................................
EY914014       <-- ..................................................
FD542607       <-- ..................................................
EY900604       <-- ..................................................
EY930178       <-- ..................................................
FD561714       <-- ..................................................
EW714533       <-- ..................................................
EY913299       <-- ..................................................
FY443448       <-- ATCACCAAAAGAGGGGTTAGAAAGCTTGAGGGTACGGAAGCAGATGTCGT
FD949684       <-- ATCACCAAAAGAGGGGTTAGAAAGCTTGAGGGTACGGAAGCAGATGTCGT
EY915939       <-- ATCACCAAATGAGGGGTTAGAAAGCTTGAGGGTACGGAAGTAGATGTCGT
FD570849       <-- ATCACCAAAAGAGGGGTTAGAAAGCTTGAGGGTACGGAAGCAGATGTCGT
EX747868       <-- ATCACCAAAAGAGGGGTTAGAGAGCTTGAGGGTACGGAAGCAGATGTCGT
EY897863       <-- ATCACCAAAAGAGGGGTTAGAGAGCTTGAGGGTACGGAAGCAGATGTCGT
EV536690       <-- ATCACCAAAAGAGGGGTTAGAAAGCTTGAGGGTACGGAAGCAAATGTCGT
FY450227       <-- ATCACCAAAAGAGGGGTTAGAAAGCTTGAGGGTACGGAAGCAGATGTCGT
EV535353       <-- ATCACCAAAAGAGGGGTTAGAGAGCTTGAGGGTACGGAAGCAGATGTCGT
FD954084       <-- ..................................................
FD534245       <-- ..................................................
EV546785       --> ..................................................
EV540060       --> ..................................................
EY909555       --> ..................................................
EX751955       --> ..................................................
EV541079       --> ..................................................
EW720392       --> ..................................................
EX901720       --> ..................................................
EY911696       --> ..................................................
FD538635       --> ..................................................
FD945300       --> ..................................................
FD574787       --> ..................................................
EY910142       --> ..................................................
EX892597       --> ..................................................
FY449013       --> ..................................................
EY896105       --> ..................................................
EY926434       --> ..................................................
FD530236       --> ..................................................
FY442208       --> ..................................................
EW719650       --> ..................................................
EY894067       --> ..................................................
FY445741       --> ATCACCAAAAGAGGGGTTAGAAAGCTTGAGGGTACGGAAGCAGATGTCGT

               1001   -   1051
UN23494        --> AGAGAGCCTCGTTGTCGAGAACCATACACTCGTCGGCGTTTTCAACGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX898090       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY914014       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD542607       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900604       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY930178       <-- ..................................................  Raphanus sativus var. oleiformis
FD561714       <-- ..................................................  Raphanus sativus var. oleiformis
EW714533       <-- ..................................................  Raphanus sativus var. oleiformis
EY913299       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY443448       <-- AGAGAGCCTCGTTGTCGAGAACCATACACTCGTCGGCGTTTTCAACGAGC  Raphanus sativus cv GSK3-1
FD949684       <-- AGAGAGCCTCATTGTCGAGAACCATACACTCGTCGGCGTTTTCAACGAGC  Raphanus sativus cv Early Scarlet Globe
EY915939       <-- AGAGAGCCTCATTGTCGAGAACCc..........................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570849       <-- AGAGAGCCTCATTGTCGAGAACCATACACTCGTCGGCGTTTTCAACGAGC  Raphanus sativus cv Early Scarlet Globe
EX747868       <-- AGAGAGCCTCATTGTCGAGAACCATACACTCGTCGGCGTTTTCAACGAGC  Raphanus raphanistrum subsp. maritimus
EY897863       <-- AGAGAGCCTCATTGTCGAGAACCATACACTCGTCGGCGTTTTCAACGAGC  Raphanus raphanistrum subsp. maritimus
EV536690       <-- AGAGAGCCTCGTTGTCGAGAACCATACACTCGTCGGCGTTTTCAACGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450227       <-- AGAGAGCCTCGTTGTCGAGAACCATACACTCGTCGGCGTTTTCAACGAGC  Raphanus sativus cv GSK3-1
EV535353       <-- AGAGAGCCTCGTTGTCGAGAACCATACACTCGTCGGCGTTTTCAACGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954084       <-- .......................................TTTCAACGAGC  Raphanus sativus cv Rat-Tail Radish #3870
FD534245       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV546785       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540060       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909555       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751955       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV541079       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720392       --> ..................................................  Raphanus sativus var. oleiformis
EX901720       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY911696       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538635       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945300       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD574787       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY910142       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892597       --> ..................................................  Raphanus sativus var. oleiformis
FY449013       --> ..................................................  Raphanus sativus cv GSK3-1
EY896105       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY926434       --> ..................................................  Raphanus sativus var. oleiformis
FD530236       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY442208       --> ..................................................  Raphanus sativus cv GSK3-1
EW719650       --> ..................................................  Raphanus sativus var. oleiformis
EY894067       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY445741       --> AGAGAGCCTCGTTGTCGAGAACCATACACTCGTCGGCGTTTTCAACGAGC  Raphanus sativus cv GSK3-1

               1051   -   1101
UN23494        --> TGATGCACAGAGAGCGTTGCGTTGTATGGCTCAACAACAGTGTCGGAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- ..................................................
EX898090       <-- ..................................................
EY914014       <-- ..................................................
FD542607       <-- ..................................................
EY900604       <-- ..................................................
EY930178       <-- ..................................................
FD561714       <-- ..................................................
EW714533       <-- ..................................................
EY913299       <-- ..................................................
FY443448       <-- TGATGCACAGAGAGCGTTG...............................
FD949684       <-- TGATGCACAGAGAGCGTTGCGTTGTATGGCTCAACAACAGTGTCGGAGAC
EY915939       <-- ..................................................
FD570849       <-- TGATGCACAGAGAGCGTTGCGTTGTATGGCTCAACAACAGTGTCGGAGAC
EX747868       <-- TGATGCACAGAGAGCGTTGCGTTGTATGGCTCAACAACAGTGTCGGAGAC
EY897863       <-- TGATGCACAGAGAGCGc.................................
EV536690       <-- TGATGCACAGAGAGCGTTGCGTTGTACGGCTCAACAACAGTGTCGGAGAC
FY450227       <-- TGATGCACAGAGAGCGTTGCGTTGTATGGCTCAACAACAGTGTCGGAGAC
EV535353       <-- TGATGCACAGAGAGCGTTGCGTTGTATGGCTCAACAACAGTGTCGGAGAC
FD954084       <-- TGATGGACAGAGAGCGTTGCGTTGTATGGCTCAACAACAGTGTCGGAGAC
FD534245       <-- ..................................................
EV546785       --> ..................................................
EV540060       --> ..................................................
EY909555       --> ..................................................
EX751955       --> ..................................................
EV541079       --> ..................................................
EW720392       --> ..................................................
EX901720       --> ..................................................
EY911696       --> ..................................................
FD538635       --> ..................................................
FD945300       --> ..................................................
FD574787       --> ..................................................
EY910142       --> ..................................................
EX892597       --> ..................................................
FY449013       --> ..................................................
EY896105       --> ..................................................
EY926434       --> ..................................................
FD530236       --> ..................................................
FY442208       --> ..................................................
EW719650       --> ..................................................
EY894067       --> ..................................................
FY445741       --> TGATGCACAGAGAGCGTTGCGTTGTATGGCTCAACAACAGTGTCGGAGAC

               1101   -   1151
UN23494        --> CTTAGGAGAAGGAAACACCGAGAAGGTCATCATCATACGGTCTGGATACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX898090       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY914014       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD542607       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900604       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY930178       <-- ..................................................  Raphanus sativus var. oleiformis
FD561714       <-- ..................................................  Raphanus sativus var. oleiformis
EW714533       <-- ..................................................  Raphanus sativus var. oleiformis
EY913299       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY443448       <-- ..................................................  Raphanus sativus cv GSK3-1
FD949684       <-- CTTAGGAGAAGGAAACACCGAGAAGGTCATCATCATACGGTCTGGATACT  Raphanus sativus cv Early Scarlet Globe
EY915939       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570849       <-- CTTAGGAGAAGc......................................  Raphanus sativus cv Early Scarlet Globe
EX747868       <-- CTTAGGAGAAGGAAACACCGAGAAGGTCATCATCATACGATCTGGATACT  Raphanus raphanistrum subsp. maritimus
EY897863       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV536690       <-- CTTAGGAGAAGGAAACACCGAGAAGGTCATCATCATACGGTCTGGATACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450227       <-- CTTAGGAGAAGGAAACACCGAGAAGGTCATCATCATACGGTCTGGATACT  Raphanus sativus cv GSK3-1
EV535353       <-- CTTAGGAGAAGGAAACACCGAGAAGGTCATCATCATACGGTCTGGATACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954084       <-- CTTAGGAGAAGGAAACACCGAGAAGGTCATCATCATACGATCTGGATACT  Raphanus sativus cv Rat-Tail Radish #3870
FD534245       <-- .....GAGAAGGAAACACCGAGAAGGTCATCATCATACGATCTGGATACT  Raphanus raphanistrum subsp. maritimus
EV546785       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540060       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909555       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751955       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV541079       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720392       --> ..................................................  Raphanus sativus var. oleiformis
EX901720       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY911696       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538635       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945300       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD574787       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY910142       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892597       --> ..................................................  Raphanus sativus var. oleiformis
FY449013       --> ..................................................  Raphanus sativus cv GSK3-1
EY896105       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY926434       --> ..................................................  Raphanus sativus var. oleiformis
FD530236       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY442208       --> ..................................................  Raphanus sativus cv GSK3-1
EW719650       --> ..................................................  Raphanus sativus var. oleiformis
EY894067       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY445741       --> CTTAGGAGAAGGAAACACCGAGAAGGTCATCATCATACGGTCTGGATACT  Raphanus sativus cv GSK3-1

               1151   -   1201
UN23494        --> CCTCTCTTATCTTAGAGATCAAAAGCGTCCCCATCCCAGATCCAGTTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- ..................................................
EX898090       <-- ..................................................
EY914014       <-- ..................................................
FD542607       <-- ..................................................
EY900604       <-- ..................................................
EY930178       <-- ..................................................
FD561714       <-- ..................................................
EW714533       <-- ..................................................
EY913299       <-- ..................................................
FY443448       <-- ..................................................
FD949684       <-- CCTCTCTTc.........................................
EY915939       <-- ..................................................
FD570849       <-- ..................................................
EX747868       <-- CCTCTCTTATCTTAGAGATCAAAAGCGTCCCCATCCCAGATCCAGTTCCA
EY897863       <-- ..................................................
EV536690       <-- CCTCTCTTATCTTAGAGATCAAAAGCGTCCCCATCCCAGATCCAGTTCCA
FY450227       <-- CCTCTCTTATCTTAGAGATCAAAAGCGTCCCCATCCCAGATCCAGTTCCA
EV535353       <-- CCTCTCTTATCTTAGAGATCAAAAGCGTTCCCATCCCAGATCCAGTTCCA
FD954084       <-- CCTCTCTTATCTTAGAGATCAAAAGCGTCCCCATCCCAGATCCAGTTCCA
FD534245       <-- CCTCTCTTATCTTAGAGATCAAAAGCGTCCCCATCCCAGATCCAGTTCCA
EV546785       --> ..................................................
EV540060       --> ..................................................
EY909555       --> ..................................................
EX751955       --> ..................................................
EV541079       --> ..................................................
EW720392       --> ..................................................
EX901720       --> ..................................................
EY911696       --> ..................................................
FD538635       --> ..................................................
FD945300       --> ..................................................
FD574787       --> ..................................................
EY910142       --> ..................................................
EX892597       --> ..................................................
FY449013       --> ..................................................
EY896105       --> ..................................................
EY926434       --> ..................................................
FD530236       --> ..................................................
FY442208       --> ..................................................
EW719650       --> ..................................................
EY894067       --> ..................................................
FY445741       --> CCTCTCTTATCTTAGAGATCAAAAGCGTCCCCATCCCAGATCCAGTTCCA

               1201   -   1251
UN23494        --> CCTCCCAACGAGTGACACACTTGGAAACCTTGAAGGCAATCGCTGTTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX898090       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY914014       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD542607       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900604       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY930178       <-- ..................................................  Raphanus sativus var. oleiformis
FD561714       <-- ..................................................  Raphanus sativus var. oleiformis
EW714533       <-- ..................................................  Raphanus sativus var. oleiformis
EY913299       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY443448       <-- ..................................................  Raphanus sativus cv GSK3-1
FD949684       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY915939       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570849       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX747868       <-- CCTCCCAACGAGTGACAAACTTGGAAACCTTGAAGGCAATCGCTGCTCTC  Raphanus raphanistrum subsp. maritimus
EY897863       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV536690       <-- CCTCCCAACGAGTGACACACTTGGAAACCTTGAAGGCAATCGCTGTTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450227       <-- CCTCCCAACGAGTGACACACTTGGAAACCTTGAAGGCAATCGCTGTTCTC  Raphanus sativus cv GSK3-1
EV535353       <-- CCTCCCAACGAGTGACACGCTTGGAAACCTTGAAGGCAATCGCTGTTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954084       <-- CCTCCCAACGAGTGACAAACTTGGAAACCTTGAAGGCAATCGCTGTTCTC  Raphanus sativus cv Rat-Tail Radish #3870
FD534245       <-- CCTCCCAACGAGTGACAAACTTGGAAACCTTGAAGGCAATCGCTGTTCTC  Raphanus raphanistrum subsp. maritimus
EV546785       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540060       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909555       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751955       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV541079       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720392       --> ..................................................  Raphanus sativus var. oleiformis
EX901720       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY911696       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538635       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD945300       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD574787       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY910142       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX892597       --> ..................................................  Raphanus sativus var. oleiformis
FY449013       --> ..................................................  Raphanus sativus cv GSK3-1
EY896105       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY926434       --> ..................................................  Raphanus sativus var. oleiformis
FD530236       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY442208       --> ..................................................  Raphanus sativus cv GSK3-1
EW719650       --> ..................................................  Raphanus sativus var. oleiformis
EY894067       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY445741       --> CCTCCCAACGAGTGACACACTTGGAAACCTTGAAGGCAATCGCTGTTCTC  Raphanus sativus cv GSK3-1

               1251   -   1301
UN23494        --> AGCTTCCTTCCTCACAACATCGAGAACGGAATCGATCAGCTCCGCTCCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- ..................................................
EX898090       <-- ..................................................
EY914014       <-- ..................................................
FD542607       <-- ..................................................
EY900604       <-- ..................................................
EY930178       <-- ..................................................
FD561714       <-- ..................................................
EW714533       <-- ..................................................
EY913299       <-- ..................................................
FY443448       <-- ..................................................
FD949684       <-- ..................................................
EY915939       <-- ..................................................
FD570849       <-- ..................................................
EX747868       <-- AGCTTCCTTCCTGACAACATCGAGAACGGAATCGATCAc...........
EY897863       <-- ..................................................
EV536690       <-- AGCTTCCTTTCTCACAACATCGAGAACGGAATCGATCAACTCGGCTCCCT
FY450227       <-- AGCTTCCTTCCTCACAACATCGAGAACGGAATCGATCAGCTCCGCTCCCT
EV535353       <-- AGCTTCCTTTCTCACAACATCGAGAACGGAATCGATTAACTCCGCTCCCT
FD954084       <-- AGCTTCCTTCCTCACAACATCGAGAACGGAATCGATCAGCTCCGCTCCCT
FD534245       <-- AGCTTCCTTCCTGACAACATCGAGAACGGAATCGATCAGCTCCGCTCCCT
EV546785       --> ..................................................
EV540060       --> ..................................................
EY909555       --> ..................................................
EX751955       --> ..................................................
EV541079       --> ..................................................
EW720392       --> ..................................................
EX901720       --> ..................................................
EY911696       --> ..................................................
FD538635       --> ..................................................
FD945300       --> ..................................................
FD574787       --> ..................................................
EY910142       --> ..................................................
EX892597       --> ..................................................
FY449013       --> ..................................................
EY896105       --> ..................................................
EY926434       --> ..................................................
FD530236       --> ..................................................
FY442208       --> ..................................................
EW719650       --> ..................................................
EY894067       --> ..................................................
FY445741       --> AGCTTCCTTCCTCACAACATCGAGAACGGAATCGATCAGCTCCGCTCCCT

               1301   -   1351
UN23494        --> CCGTGTAATGACCTTTGGCCCAGTTATTCCCGGCGCCGGACTGGCCAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- ..................................................
EX898090       <-- ..................................................
EY914014       <-- ..................................................
FD542607       <-- ..................................................
EY900604       <-- ..................................................
EY930178       <-- ..................................................
FD561714       <-- ..................................................
EW714533       <-- ..................................................
EY913299       <-- ..................................................
FY443448       <-- ..................................................
FD949684       <-- ..................................................
EY915939       <-- ..................................................
FD570849       <-- ..................................................
EX747868       <-- ..................................................
EY897863       <-- ..................................................
EV536690       <-- CCGTGTAATGACCTTTGGCCCAGTTATTCCCGGCGCCGGACTGGCCAAAG
FY450227       <-- CCGTGTAATGACCTTTGGCCCAGTTATTCCCGGCGCCGGACTGGCCAAAG
EV535353       <-- CCGTGTAATGACCTTTGGCCCAGTTATTCCCGGCGCCGGACTGGCCAAAG
FD954084       <-- CCGTGTAGTGACCTTTGGCCCAGTTATTCCCGGCGCCGGACTGGCCAAAG
FD534245       <-- CCGTGTAGTGACCTTTCGCCCAGTTATTCCCGGCGCCGGACTGGCCAAAG
EV546785       --> ..................................................
EV540060       --> ..................................................
EY909555       --> ..................................................
EX751955       --> ..................................................
EV541079       --> ..................................................
EW720392       --> ..................................................
EX901720       --> ..................................................
EY911696       --> ..................................................
FD538635       --> ..................................................
FD945300       --> ..................................................
FD574787       --> ..................................................
EY910142       --> ..................................................
EX892597       --> ..................................................
FY449013       --> ..................................................
EY896105       --> ..................................................
EY926434       --> ..................................................
FD530236       --> ..................................................
FY442208       --> ..................................................
EW719650       --> ..................................................
EY894067       --> ..................................................
FY445741       --> CCGTGTAATGACCTTTGGCCCAGTTATTCCCGGCGCCGGACTGGCCAAAG

               1351   -   1401
UN23494        --> ACGAAGTTATCGGGACGGAAGATCTGGCCGTAGGGACCAGATCTGAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- ..................................................
EX898090       <-- ..................................................
EY914014       <-- ..................................................
FD542607       <-- ..................................................
EY900604       <-- ..................................................
EY930178       <-- ..................................................
FD561714       <-- ..................................................
EW714533       <-- ..................................................
EY913299       <-- ..................................................
FY443448       <-- ..................................................
FD949684       <-- ..................................................
EY915939       <-- ..................................................
FD570849       <-- ..................................................
EX747868       <-- ..................................................
EY897863       <-- ..................................................
EV536690       <-- ACGAAGTTATCGGGACGGAAGATCTGGCCGTAGGGACCAGATCTGAGAGA
FY450227       <-- ACGAAGTTATCGGGACGGAAGATCTGGCCGTAGGGACCAGATCTGAGAGA
EV535353       <-- ACGAAGTTATCAGGACGGAAGATCTGGCCGTAGGGACCAGATCTGAGAGA
FD954084       <-- ACGAAGTTATCGGGGCGGAAGATCTGACCGTAGGGACCAGATCTGAGAGA
FD534245       <-- ACGAAGTTATCGGGACGGAAGATCTGACCGTAGGGACCAGATCTGAGAGA
EV546785       --> ..................................................
EV540060       --> ..................................................
EY909555       --> ..................................................
EX751955       --> ..................................................
EV541079       --> ..................................................
EW720392       --> ..................................................
EX901720       --> ..................................................
EY911696       --> ..................................................
FD538635       --> ..................................................
FD945300       --> ..................................................
FD574787       --> ..................................................
EY910142       --> ..................................................
EX892597       --> ..................................................
FY449013       --> ..................................................
EY896105       --> ..................................................
EY926434       --> ..................................................
FD530236       --> ..................................................
FY442208       --> ..................................................
EW719650       --> ..................................................
EY894067       --> ..................................................
FY445741       --> ACGAAGTTATCGGGACGGAAGATCTGGCCGTAGGGACCAGATCTGAGAGA

               1401   -   1451
UN23494        --> GTCCATGGTTCCAGGCTCCAGATCCATGAGAACGGCGCGAGGGACGTACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- ..................................................
EX898090       <-- ..................................................
EY914014       <-- ..................................................
FD542607       <-- ..................................................
EY900604       <-- ..................................................
EY930178       <-- ..................................................
FD561714       <-- ..................................................
EW714533       <-- ..................................................
EY913299       <-- ..................................................
FY443448       <-- ..................................................
FD949684       <-- ..................................................
EY915939       <-- ..................................................
FD570849       <-- ..................................................
EX747868       <-- ..................................................
EY897863       <-- ..................................................
EV536690       <-- GTCCATGGTTCCAGGCTCCAGATCCATGAGGACGGCGCGAGGGACGTACT
FY450227       <-- GTCCATGGTTCCAGGCTCCAGATCCATGAGAACGGCGCGAGGGACGTACT
EV535353       <-- GTCCATGGTTCCAGGCTCCAGATCCATGAGAACGGCGCGAGGGACGTACT
FD954084       <-- GTCCATGGTTCCAGGCTCCAGATCCATGAGAACGGCGCGAGGGACGTACT
FD534245       <-- GTCCATGGTGCCAGGCTCCAGATCCATGAGAACGGCGCGAGGGACGTACT
EV546785       --> ..................................................
EV540060       --> ..................................................
EY909555       --> ..................................................
EX751955       --> ..................................................
EV541079       --> ..................................................
EW720392       --> ..................................................
EX901720       --> ..................................................
EY911696       --> ..................................................
FD538635       --> ..................................................
FD945300       --> ..................................................
FD574787       --> ..................................................
EY910142       --> ..................................................
EX892597       --> ..................................................
FY449013       --> ..................................................
EY896105       --> ..................................................
EY926434       --> ..................................................
FD530236       --> ..................................................
FY442208       --> ..................................................
EW719650       --> ..................................................
EY894067       --> ..................................................
FY445741       --> GTCCATGGTTCCAGGCTCCAGATCCATGAGAACGGCGCGAGGGACGTACT

               1451   -   1501
UN23494        --> TTCCGCCGCTCGCTTCGTTGAAATAGACATCGATGCGTTCGAGCTGGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- ..................................................
EX898090       <-- ..................................................
EY914014       <-- ..................................................
FD542607       <-- ..................................................
EY900604       <-- ..................................................
EY930178       <-- ..................................................
FD561714       <-- ..................................................
EW714533       <-- ..................................................
EY913299       <-- ..................................................
FY443448       <-- ..................................................
FD949684       <-- ..................................................
EY915939       <-- ..................................................
FD570849       <-- ..................................................
EX747868       <-- ..................................................
EY897863       <-- ..................................................
EV536690       <-- TTCCGCCGCTCGCTTCGTTGAAATc.........................
FY450227       <-- TTCCGCCGCTCGCTTCGTTGAAATAGACATCGATGCGTTCGAGCTGGAGA
EV535353       <-- TTCCGCCGCTCGCTTCGTTGAAATAGACATCGATGCGTTCGAGCTGGAGA
FD954084       <-- TTCCGCCGCTCGCTTCGTTGAAATAGACGTCGATGCGCTCGAGCTGGAGA
FD534245       <-- TTCCGCCGCTCGCTTCGTTGAAATAGACGTCGATGCGTTCGAGCTGGAGA
EV546785       --> ..................................................
EV540060       --> ..................................................
EY909555       --> ..................................................
EX751955       --> ..................................................
EV541079       --> ..................................................
EW720392       --> ..................................................
EX901720       --> ..................................................
EY911696       --> ..................................................
FD538635       --> ..................................................
FD945300       --> ..................................................
FD574787       --> ..................................................
EY910142       --> ..................................................
EX892597       --> ..................................................
FY449013       --> ..................................................
EY896105       --> ..................................................
EY926434       --> ..................................................
FD530236       --> ..................................................
FY442208       --> ..................................................
EW719650       --> ..................................................
EY894067       --> ..................................................
FY445741       --> TTCCGCCGCTCGCTTCGTTGAAATAGACATCGATGCGTTCGAGCTGGAGA

               1501   -   1551
UN23494        --> GGGGAGTCGCCGACGTATTGGCCGGTGTGGTCAATGCCGTGCTCGTCGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- ..................................................
EX898090       <-- ..................................................
EY914014       <-- ..................................................
FD542607       <-- ..................................................
EY900604       <-- ..................................................
EY930178       <-- ..................................................
FD561714       <-- ..................................................
EW714533       <-- ..................................................
EY913299       <-- ..................................................
FY443448       <-- ..................................................
FD949684       <-- ..................................................
EY915939       <-- ..................................................
FD570849       <-- ..................................................
EX747868       <-- ..................................................
EY897863       <-- ..................................................
EV536690       <-- ..................................................
FY450227       <-- GGGGAGTCGCCGACGTATTGGCCGGTGTGGTCAATGCCGTGCTCGTCGCA
EV535353       <-- GGAGAGTCGCCGACGCATTGGCCGGTGTGGTCAATGCCGTGCTCGTCGCA
FD954084       <-- GGGGAGTCGCCGACGTATTGGCCGGTGTGGTCAATGCCGTGCTCGTCGCA
FD534245       <-- GGGGAGTCGCCGACGTATTGCCCGGTGTGGTCAATGCCGTGCTCGTCGCA
EV546785       --> ..................................................
EV540060       --> ..................................................
EY909555       --> ..................................................
EX751955       --> ..................................................
EV541079       --> ..................................................
EW720392       --> ..................................................
EX901720       --> ..................................................
EY911696       --> ..................................................
FD538635       --> ..................................................
FD945300       --> ..................................................
FD574787       --> ..................................................
EY910142       --> ..................................................
EX892597       --> ..................................................
FY449013       --> ..................................................
EY896105       --> ..................................................
EY926434       --> ..................................................
FD530236       --> ..................................................
FY442208       --> ..................................................
EW719650       --> ..................................................
EY894067       --> ..................................................
FY445741       --> GGGGAGTCGCCGACGTATTGGCCGGTGTGGTCAATGCCGTGCTCGTCGCA

               1551   -   1601
UN23494        --> GATCACTTCCCAGAACTTGGCTCCGATCTGGTTTCCACATTGGCCGCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- ..................................................
EX898090       <-- ..................................................
EY914014       <-- ..................................................
FD542607       <-- ..................................................
EY900604       <-- ..................................................
EY930178       <-- ..................................................
FD561714       <-- ..................................................
EW714533       <-- ..................................................
EY913299       <-- ..................................................
FY443448       <-- ..................................................
FD949684       <-- ..................................................
EY915939       <-- ..................................................
FD570849       <-- ..................................................
EX747868       <-- ..................................................
EY897863       <-- ..................................................
EV536690       <-- ..................................................
FY450227       <-- GATCACTTCCCAGAACTTGGCTCCGATCTGGTTTCCACATTGGCCGCCTT
EV535353       <-- GATCACTTCCCAGAACTTGGCACCGATCTGGTTTCCACATTGGCCGCCTT
FD954084       <-- GATCACTTCCCGGAACTTGGCTCCGATCTGGTTTCCACATTGGCCGCCTT
FD534245       <-- GATCACTTCCCAGAACTTCGCGCCGATCTGGTTTCCACATTGGCCGCCTT
EV546785       --> ..................................................
EV540060       --> ..................................................
EY909555       --> ..................................................
EX751955       --> ..................................................
EV541079       --> ..................................................
EW720392       --> ..................................................
EX901720       --> ..................................................
EY911696       --> ..................................................
FD538635       --> ..................................................
FD945300       --> ..................................................
FD574787       --> ..................................................
EY910142       --> ..................................................
EX892597       --> ..................................................
FY449013       --> ..................................................
EY896105       --> ..................................................
EY926434       --> ..................................................
FD530236       --> ..................................................
FY442208       --> ..................................................
EW719650       --> ..................................................
EY894067       --> ..................................................
FY445741       --> GATCACTTCCCAGAACTTGGCTCCGATCTGGTTTCCACATTGGCCGCCTT

               1601   -   1651
UN23494        --> GGATGTGGAGGATCTCTCTCATTTTCTCTCGTTTTGAGTTTTTTTTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- ..................................................
EX898090       <-- ..................................................
EY914014       <-- ..................................................
FD542607       <-- ..................................................
EY900604       <-- ..................................................
EY930178       <-- ..................................................
FD561714       <-- ..................................................
EW714533       <-- ..................................................
EY913299       <-- ..................................................
FY443448       <-- ..................................................
FD949684       <-- ..................................................
EY915939       <-- ..................................................
FD570849       <-- ..................................................
EX747868       <-- ..................................................
EY897863       <-- ..................................................
EV536690       <-- ..................................................
FY450227       <-- GGATGTGGAGGATCTCTCTC..............................
EV535353       <-- GGATGTGGAGGATCTCTCTCATTTTCTCTCGTTTTGAGTTTTTTTCTTTT
FD954084       <-- GGATGTGGAAGATCTCTCTCATTTTCTCTCGTTTTGAGTTTTTTTTTTCT
FD534245       <-- GGATGTGGAGGATCTCTCTCATTTTCTCTCGTTTTGAGTTTTTTTTTTCT
EV546785       --> ..................................................
EV540060       --> ..................................................
EY909555       --> ..................................................
EX751955       --> ..................................................
EV541079       --> ..................................................
EW720392       --> ..................................................
EX901720       --> ..................................................
EY911696       --> ..................................................
FD538635       --> ..................................................
FD945300       --> ..................................................
FD574787       --> ..................................................
EY910142       --> ..................................................
EX892597       --> ..................................................
FY449013       --> ..................................................
EY896105       --> ..................................................
EY926434       --> ..................................................
FD530236       --> ..................................................
FY442208       --> ..................................................
EW719650       --> ..................................................
EY894067       --> ..................................................
FY445741       --> GGATGTGGAGGATCTCTCTC..............................

               1651   -   1701
UN23494        --> TTTTTTTTA-GAGAAAATGGGCGACGCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV551741       <-- .............................
EX898090       <-- .............................
EY914014       <-- .............................
FD542607       <-- .............................
EY900604       <-- .............................
EY930178       <-- .............................
FD561714       <-- .............................
EW714533       <-- .............................
EY913299       <-- .............................
FY443448       <-- .............................
FD949684       <-- .............................
EY915939       <-- .............................
FD570849       <-- .............................
EX747868       <-- .............................
EY897863       <-- .............................
EV536690       <-- .............................
FY450227       <-- .............................
EV535353       <-- TTTTTTTTA....................
FD954084       <-- TTTTTTTTAAGAGAAAATGGGCGACGCCC
FD534245       <-- TTTTTTTTA-GAGAAAATGGGCGACGCCC
EV546785       --> .............................
EV540060       --> .............................
EY909555       --> .............................
EX751955       --> .............................
EV541079       --> .............................
EW720392       --> .............................
EX901720       --> .............................
EY911696       --> .............................
FD538635       --> .............................
FD945300       --> .............................
FD574787       --> .............................
EY910142       --> .............................
EX892597       --> .............................
FY449013       --> .............................
EY896105       --> .............................
EY926434       --> .............................
FD530236       --> .............................
FY442208       --> .............................
EW719650       --> .............................
EY894067       --> .............................
FY445741       --> .............................