1      -     51
UN23500        --> GGCCATTTGTTACTTGGTTTCCACGGCAAACCCATAAACATGAAGATACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD569786       <-- GGCCATTTGTTACTTGGTTTCCACGGCAAACCCATAAACATGAAGATACA
FD940006       <-- ...............................................ggA
EY914677       <-- ..................................................
FD989979       <-- ..................................................
FD954960       <-- ..................................................
EY921672       <-- ..................................................
EX890285       <-- ..................................................
EY908441       <-- .............................................aacat
EY908820       <-- ..................................................
FD540022       <-- ..................................................
EV527728       <-- ..................................................
FD573918       --> GGCCATTTGTTACTTGGTTTCCACGGCAAACCCATAAACATGAAGATACA
FD985695       --> ..................................................
EX893835       --> ..................................................
EY904134       --> .............................................aacat
FD536605       --> ..................................................

               51     -    101
UN23500        --> GATAAATCAAAAGTGGCTCATCATATATAATGGTCACAAATTGGCAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD569786       <-- GATAAATCAAAAGTGGCTCATCATATATAATGGTCACAAATTGGCAGAGA
FD940006       <-- GATAAATCAAA-GTGGCTCATCATATATAATGGTCACAAATTGGCAGAGA
EY914677       <-- GATAAATCAAAAGTGGCTCATCATCTATAATGCTGACAAATTGGCAGAGA
FD989979       <-- ggTAAATCAAAAGTGGCTCATCATCTATAATGCTCACAAATTGGCAGAGA
FD954960       <-- ...AAATCAAA-GTGGCTCATCATATATAATGGTCACAAATTGGCAGAGA
EY921672       <-- ....AATCAAA-GTGGCTCATCATATATAATGGTCACAAATTGGCAGAGA
EX890285       <-- ......atcAAAGTGGCTCATCATATATAATGGTCACAAATTGGCAGAGA
EY908441       <-- gaagatctcAAAGTGGCTCATCATATATAATGGTCACAAATTGGCAGAGA
EY908820       <-- .......tcAAAGTGGCTCATCATATATAATGGTCACAAATTGGCAGAGA
FD540022       <-- ......ctcAAAGTGGCTCATCATATATAATGGTCACAAATTGGCAGAGA
EV527728       <-- ..................................................
FD573918       --> GATAAATCAAAAGTGGCTCATCATATATAATGGTCACAAATTGGCAGAAA
FD985695       --> ggTAAATCAAAAGTGGCTCATCATCTATAATGCTCACAAATTGGCAGAAA
EX893835       --> ......atcAAAGTGGCTCATCATATATAATGGTCACAAATTGGCAGAAA
EY904134       --> gaagatctcAAAGTGGCTCATCATATATAATGGTCACAAATTGGCAGAGA
FD536605       --> ......ctcAAAGTGGCTCATCATATATAATGGTCACAAATTGGCAGAGA

               101    -    151
UN23500        --> CAGACCAAACACACAAACGAAAGAAAGACAACGTTGCAGCCCATTATTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD569786       <-- CAGACCAAACACGCAAACGAAAGAAAGACAACGTTGCAGCC-ATTATTAA  Raphanus sativus cv Early Scarlet Globe
FD940006       <-- CAGACCAAACACACAAACGAAAGAAAGGCAACGTTGCAGCCCATTATTAA  Raphanus sativus var. oleiformis
EY914677       <-- CAGACCAAAGACACAAACGAAAGAAAGACAACGTTGCAGCCCATTATTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989979       <-- CAGACCAAAGACACAAACGAAAGAAAGACAACGTTGCAGCCCATTATTAA  Raphanus raphanistrum subsp. landra
FD954960       <-- CAGACCAAACACACAAACGAAAGAAAGGCAACGTTGCAGCCCATTATTAA  Raphanus sativus cv Rat-Tail Radish #3870
EY921672       <-- CAGACCAAAGACACAAACGAAAGAAAGACAACGTTGCAGCCCATTATTAA  Raphanus raphanistrum subsp. landra
EX890285       <-- CAGACCAAACACACAAACGAAAGAAAGGCAACGTTGCAGCCCATTATTAA  Raphanus sativus var. oleiformis
EY908441       <-- CAGACCAAACACATAAACGAAAGAAAGACAACGTTGCAGCCCATTATTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908820       <-- CAGACCAAACACATAAACGAAAGAAAGACAACGTTGCAGCCCATTATTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540022       <-- CAGACCAAACACATAAACGAAAGAAAGACAACGTTGCAGCCCATTATTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV527728       <-- .............CAAACGAAAGAAAGACAACGTTGCAGCCCATTATTAA  Raphanus raphanistrum subsp. maritimus
FD573918       --> CAGACCAAACACGCAAACGAAAGAAAGACAACGTTGCAGCC-ATTATTAA  Raphanus sativus cv Early Scarlet Globe
FD985695       --> CAGACCAAAGACACAAACGAAAGAAAGACAACGTTGCAGCCCATTATTAA  Raphanus raphanistrum subsp. landra
EX893835       --> CAGACCAAACACACAAACGAAAGAAAGGCAACGTTGCAGCCCATTATTAA  Raphanus sativus var. oleiformis
EY904134       --> CAGACCAAACACATAAACGAAAGAAAGACAACGTTGCAGCCCATTATTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536605       --> CAGACCAAACACATAAACGAAAGAAAGACAACGTTGCAGCCCATTATTAA  Raphanus raphanistrum subsp. raphanistrum (MS)

               151    -    201
UN23500        --> ACATAAAA--AGC--AAAACCTAATAAAACGATCATTGCGGTAGTATTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD569786       <-- ACATAAAAGCAGATTAAAACCTAATAAA-CGATCATTGCGGTAGTATTAT  Raphanus sativus cv Early Scarlet Globe
FD940006       <-- ACATAAAA--AGC--AAAACCTAATAAAACGATCATTGCGGTAGTATTAT  Raphanus sativus var. oleiformis
EY914677       <-- ACATAAAA--AGC--AAAACCTAATAAAACGATCATTGCAGTAGTATTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989979       <-- ACATAAAA--AGC--AAAACCTAATAAAACGATCATTGCAGTAGTATTAT  Raphanus raphanistrum subsp. landra
FD954960       <-- ACATAAAA--GGC--AAAACCTAATAAAACGATCATTGCGGTAGTATTAT  Raphanus sativus cv Rat-Tail Radish #3870
EY921672       <-- ACATAAAA--AGC--AAAACCTAATAAAACGATCATTGCGGTAGTATTAT  Raphanus raphanistrum subsp. landra
EX890285       <-- ACATAAAA--AGC--AAAACCTAATAAAACGATCATTGCGGTAGTATTAT  Raphanus sativus var. oleiformis
EY908441       <-- ACATAAAA--AGC--AAAACCTAATAAAACGGTTATTGCGGTAGTATTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908820       <-- ACATAAAA--AGC--AAAACCTAATAAAACGGTTATTGCGGTAGTATTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540022       <-- ACATAAAA--AGC--AAAACCTAATAAAACGGTTATTGCGGTAGTATTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV527728       <-- ACATAAAA--AGC--AAAACCTAATAAAACGATCATTGCAGTAGTATTAT  Raphanus raphanistrum subsp. maritimus
FD573918       --> ACATAAAAGCAGATTAAAACCTAATAAA-CGATCATTGCGGTAGTATTAT  Raphanus sativus cv Early Scarlet Globe
FD985695       --> ACATAAAA--AGC--AAAACCTAATAAAACGATCATTGCAGTAGTATTAT  Raphanus raphanistrum subsp. landra
EX893835       --> ACATAAAA--AGC--AAAACCTAATAAAACGATCATTGCGGTAGTATTAT  Raphanus sativus var. oleiformis
EY904134       --> ACATAAAA--AGC--AAAACCTAATAAAACGGTTATTGCGGTAGTATTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536605       --> ACATAAAA--AGC--AAAACCTAATAAAACGGTTATTGCGGTAGTATTAT  Raphanus raphanistrum subsp. raphanistrum (MS)

               201    -    251
UN23500        --> TACTTAACTAAAAAGACAAACTGATTATCTCTGCCTTTCTTAAAAAGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD569786       <-- TACTTAACTAAAAAGACAAACTGATTATCTCTGCCTTTCTTAAAAAGGGT
FD940006       <-- TACTTAACTAAAAAGACAAACTGATTATCTCTGCCTTTCTTAAAAAGGGT
EY914677       <-- TACTTAACTAAAAAGACAAACTGATTATCTCTGCCTTTCTTAAAAAGGGT
FD989979       <-- TACTTAACTAAAAAGACAAACTGATTATCTCTGCCTTTCTTAAAAAGGGT
FD954960       <-- TACTTAACTAAAAAGACAAACTGATTATCTCTGCCCTTCTTAAAAAGGGT
EY921672       <-- TACTTAACTAAAAAGACAAACTGATTATCTCTGCCTTTCTTAAAAAGGGT
EX890285       <-- TACTTAACTAAAAAGACAAACTGATTATCTCTGCCTTTCTTAAAAAGGGT
EY908441       <-- TACTTAACTAAAAAGACAAACTGATTATCTCTGCCTTTCTTAAAAAGGGT
EY908820       <-- TACTTAACTAAAAAGACAAACTGATTATCTCTGCCTTTCTTAAAAAGGGT
FD540022       <-- TACTTAACTAAAAAGACAAACTGATTATCTCTGCCTTTCTTAAAAAGGGT
EV527728       <-- TACTTAACTAAAAAGACAAACTGATTATCTCTGCCTTTCTTAAAAAGGGT
FD573918       --> TACTTAACTAAAAAGACAAACTGATTATCTCTGCCTTTCTTAAAAAGGGT
FD985695       --> TACTTAACTAAAAAGACAAACTGATTATCTCTGCCTTTCTTAAAAAGGGT
EX893835       --> TACTTAACTAAAAAGACAAACTGATTATCTCTGCCTTTCTTAAAAAGGGT
EY904134       --> TACTTAACTAAAAAGACAAACTGATTATCTCTGCCTTTCTTAAAAAGGGT
FD536605       --> TACTTAACTAAAAAGACAAACTGATTATCTCTGCCTTTCTTAAAAAGGGT

               251    -    301
UN23500        --> TTTACTCATTTACAGGTGCAAGGATCACACTTGCAGTCAGATCCACACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD569786       <-- TTTACTCATTTACAGGTGCAAGGATCACACTTGCAGTCAGATCCACACTT
FD940006       <-- TTTACTCATTTACAGGTGCAAGGATCACACTTGCAGTCAGATCCACACTT
EY914677       <-- TTTACTCATTTACAGGTGCAAGGATCACACTTGCAGTCAGATCCACACTT
FD989979       <-- TTTACTCATTTACAGGTGCAAGGATCACACTTGCAGTCAGATCCACACTT
FD954960       <-- TTTACTCATTTACAGGTGCAAGGATCACACTTGCAGTCAGATCCACACTT
EY921672       <-- TTTACTCATTTACAGGTGCAAGGATCACACTTGCAGTCAGATCCACAATT
EX890285       <-- TTTACTCATTTACAGGTGCAAGGATCACACTTGCAGTCAGATCCACACTT
EY908441       <-- TTTACTCATTTACAGGTGCAAGGATCACACTTGCAGTCAGATCCACACTT
EY908820       <-- TTTACTCATTTACAGGTGCAAGGATCACACTTGCAGTCAGATCCACACTT
FD540022       <-- TTTACTCATTTACAGGTGCAAGGATCACACTTGCAGTCAGATCCACACTT
EV527728       <-- TTTACTCATTTACAGGTGCAAGGATCACACTTGCAGTCAGATCCACACTT
FD573918       --> TTTACTCATTTACAGGTGCAAGGATCACACTTGCAGTCAGATCCACACTT
FD985695       --> TTTACTCATTTACAGGTGCAAGGATCACACTTGCAGTCAAATCCACACTT
EX893835       --> TTTACTCATTTACAGGTGCAAGGATCACACTTGCAGTCAGATCCACACTT
EY904134       --> TTTACTCATTTACAGGTGCAAGGATCACACTTGCAGTCAGATCCACACTT
FD536605       --> TTTACTCATTTACAGGTGCAAGGATCACACTTGCAGTCAGATCCACACTT

               301    -    351
UN23500        --> GCATGTACATCCATCGTTCTCGGCGTTACTCTCGCCGGAAGCCTCGTACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD569786       <-- GCATGTGCATCCATCGTTCTCGACGTTACTCTCGCCGGAAGCCTCGTACT  Raphanus sativus cv Early Scarlet Globe
FD940006       <-- GCATGTACATCCATCGTTCTCGGCGTTACTCTCGCCGGAAGCCTCGTACT  Raphanus sativus var. oleiformis
EY914677       <-- GCGTGTGCATCCATCGTTCTCGACGTTACTCTCGCCGGAAGCCTCGTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989979       <-- GCATGTGCATCCATCGTTCTCGACGTTACTCTCGCCGGAAGCCTCGTACT  Raphanus raphanistrum subsp. landra
FD954960       <-- GCATGTACATCCATCGTTCTCGGCGTTACTCTCGCCGGAAGCCTCGTACT  Raphanus sativus cv Rat-Tail Radish #3870
EY921672       <-- GCATGTACATCCATCGTTCTCGGCGTTACTCTCGCCGGAAGCCTCGTACT  Raphanus raphanistrum subsp. landra
EX890285       <-- GCATGTACATCCATCGTTCTCGGCGTTACTCTCGCCGGAAGCCTCGTACT  Raphanus sativus var. oleiformis
EY908441       <-- GCATGTACATCCATCGTTCTCGGCGTTACTCTCGCCGGAAGCCTCGTACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908820       <-- GCATGTACATCCATCGTTCTCGGCGTTACTCTCGCCGGAAGCCTCGTACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540022       <-- GCATGTACATCCATCGTTCTCGGCGTTACTCTCGCCGGAAGCCTCGTACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV527728       <-- GCATGTGCATCCATCGTTCTCGACGTTACTCTCGCCGGAAGCCTCGTACT  Raphanus raphanistrum subsp. maritimus
FD573918       --> GCATGTGCATCCATCGTTCTCGACGTTACTCTCGCCGGAAGCCTCGTACT  Raphanus sativus cv Early Scarlet Globe
FD985695       --> GCATGTGCATCCATCGTTCTCGACGTTACTCTCGCCGGAAGCCTCGTACT  Raphanus raphanistrum subsp. landra
EX893835       --> GCATGTACATCCATCGTTCTCGGCGTTACTCTCGCCGGAAGCCTCGTACT  Raphanus sativus var. oleiformis
EY904134       --> GCATGTACATCCATCGTTCTCGGCGTTACTCTCGCCGGAAGCCTCGTACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536605       --> GCATGTACATCCATCGTTCTCGGCGTTACTCTCGCCGGAAGCCTCGTACT  Raphanus raphanistrum subsp. raphanistrum (MS)

               351    -    401
UN23500        --> GGTTCTTCATAGCCGGTGCAACGCCAGAGACAAAAGTCTCACTCGTGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD569786       <-- GGTTCTTCATAGCCGGTGCAACACCAGAGACAAAAGTCTCACTCGTGGTT  Raphanus sativus cv Early Scarlet Globe
FD940006       <-- GGTTCTTCATAGCCGGTGCAACGCCAGAGACAAAAGTCTCACTCGTGGTT  Raphanus sativus var. oleiformis
EY914677       <-- GGTTCTTCATAGCCGGTGCAACACCAGAGACAAAAGTCTCACTCGTGGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989979       <-- GGTTCTTCATAGCCGGTGCAACACCAGAGACAAAAGTCTCACTCGTGGTT  Raphanus raphanistrum subsp. landra
FD954960       <-- GGTTCTTCATAGCCGGTGCAACGCCAGAGACAAAAGTCTCACTCGTGGTT  Raphanus sativus cv Rat-Tail Radish #3870
EY921672       <-- GGTTCTTCATAGCCGGTGCAACGCCAGAGACAAAAGTCTCACTCGTGGTT  Raphanus raphanistrum subsp. landra
EX890285       <-- GGTTCTTCATAGCCGGTGCAACGCCAGAGACAAAAGTCTCACTCGTGGTT  Raphanus sativus var. oleiformis
EY908441       <-- GGTTCTTCATAGCCGGTGCAACGCCAGAGACAAAAGTCTCACTCGTGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908820       <-- GGTTCTTCATAGCCGGTGCAACGCCAGAGACAAAAGTCTCACTCGTGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540022       <-- GGTTCTTCATAGCCGGTGCAACGCCAGAGACAAAAGTGTCACTCGTGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV527728       <-- GGTTCTTCATAGCCGGTGCAAAACCAGAGACAAAAGTCTCACTCGTGGTT  Raphanus raphanistrum subsp. maritimus
FD573918       --> GGTTCTTCATAGCCGGTGCAACACCAGAAACAAAAGTCTCACTCGTGGTT  Raphanus sativus cv Early Scarlet Globe
FD985695       --> GGTTCTTCATAGCC....................................  Raphanus raphanistrum subsp. landra
EX893835       --> GGTTCTTCATAGCCGGTGCAACGCCAGAGACAAAAGTCTCACTCGTGGTT  Raphanus sativus var. oleiformis
EY904134       --> GGTTCTTCATAGCCGGTGCAACGCCAGAAACAAAAGTCTCACTCGTGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536605       --> GGTTCTTCATAGCCGGTGCAACGCCAGAAACAAAAGTGTCACTCGTGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)

               401    -    451
UN23500        --> GTCTCGCCGGAAAAGCCTAAGT---CAGGGTACTTTTTGCAACCTCCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD569786       <-- GTCTCGCCGGAAAAGCCTAAGT---CAGGGTACTTTTTGCAACCTCCACA  Raphanus sativus cv Early Scarlet Globe
FD940006       <-- GTCTCGCCGGAAAAGCCTAAGT---CAGGGTACTTTTTGCAACCTCCACA  Raphanus sativus var. oleiformis
EY914677       <-- GTCTCGCCGGAAAAGCCTAAGT---CAGGGTACTTTTTGCAACCTCCACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989979       <-- GTCTCGCCGGAAAAGCCTAAGT---CAGGGTACTTTTTGCAACCTCCACA  Raphanus raphanistrum subsp. landra
FD954960       <-- GTCTCGCCGGAAAAGCCTAAGT---CAGGGTACTTTTTGTAACCTCCACA  Raphanus sativus cv Rat-Tail Radish #3870
EY921672       <-- GTCTCGCCGGAAAAGCCTAAGTGATCAGGGTACTTTTTGCAACCTCCGCA  Raphanus raphanistrum subsp. landra
EX890285       <-- GTCTCGCCGGAAAAGCCTAAGT---CAGGGTACTTTTTGCAACCTCCACA  Raphanus sativus var. oleiformis
EY908441       <-- GTCTCGCCCGAAAAGCCTAAGT---CAGGGTACTTTTTGCAACCTCCACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908820       <-- GTCTCGCCCGAAAAGCCTAAGT---CAGGGTACTTTTTGCAACCTCCACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540022       <-- GTCTCGCCCGAAAAGCCTAAGT---CAGGGTACTTTTTGCAACCTCCACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV527728       <-- GTCTCGCCGGAAAAGCCTAAGT---CAGGGTACTTTTTGCAACCTCCACA  Raphanus raphanistrum subsp. maritimus
FD573918       --> GTCTCGCCGGAAAAGCCTAAGT---CAGGGTACTTTTTGCAACCTCCACA  Raphanus sativus cv Early Scarlet Globe
FD985695       --> ..................................................  Raphanus raphanistrum subsp. landra
EX893835       --> GTCTCGCCGGAAAAGCCTAAGT---CAGGGTACTTTTTGCAACCTCCACA  Raphanus sativus var. oleiformis
EY904134       --> GTCTCGCCCGAAAAGCCTAAGT---CAGGGTACTTTTTGCAACCTCCACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536605       --> GTCTCGCCCGAAAAGCCTAAGT---CAGGGTACTTTTTGCAACCTCCACA  Raphanus raphanistrum subsp. raphanistrum (MS)

               451    -    501
UN23500        --> ACAACCGTTGACGCACGTGCAGGCAGATCCACAACCACAGTTTCCTCCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD569786       <-- ACAACCGTTGACGCACGTGCAGGCAGATCCACAACCACAGTTTCCTCCAC  Raphanus sativus cv Early Scarlet Globe
FD940006       <-- ACAACCGTTGACGCACGTGCAGGCAGATCCACAACCACAGTTTCCTCCGC  Raphanus sativus var. oleiformis
EY914677       <-- ACAACCGTTGACGCACGTGCAGGCAGATCCACAACCACAGTTCCCTCCGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989979       <-- ACAACCGTTGACGCACGTGCAGGCAGATCCACAACCACAGTTCCATCCGC  Raphanus raphanistrum subsp. landra
FD954960       <-- ACAACCGTTGACGCACGTGCAGGCAGATCCACAACCACAGTTTCCTCCGC  Raphanus sativus cv Rat-Tail Radish #3870
EY921672       <-- ACAACCGTTGACGCACGTGCAGGCAGATCCACAACCACAGTTTCCTCCGC  Raphanus raphanistrum subsp. landra
EX890285       <-- ACAACCGTTGACGCACGTGCAGGCAGATCCACAACCACAGTTTCCTCCGC  Raphanus sativus var. oleiformis
EY908441       <-- ACAACCGTTGACGCACGTGCAGGCAGATCCACAACCACAGTTTCCTCCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908820       <-- ACAACCGTTGACGCACGTGCAGGCAGATCCACAACCACAGTTTCCTCCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540022       <-- ACAACCGTTGACGCACGTGCAGGCAGATCCACAACCACAGTTTCCTCCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV527728       <-- ACAACCGTTGACGCACGTGCAGGCAGATCCATAACCACAGTTCCCTCCGC  Raphanus raphanistrum subsp. maritimus
FD573918       --> ACAACCGTTGACGCACGTGCAGGCAGATCCACAACCACAGTTTCCTCCAC  Raphanus sativus cv Early Scarlet Globe
FD985695       --> ..................................................  Raphanus raphanistrum subsp. landra
EX893835       --> ACAACCGTTGACGCACGTGCAGGCAGATCCACAACCACAGTTTCCTCCGC  Raphanus sativus var. oleiformis
EY904134       --> ACAACCGTTGACGCACGTGCAGGCAGATCCACAACCACAGTTTCCTCCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536605       --> ACAACCGTTGACGCACGTGCAGGCAGATCCACAACCACAGTTTCCTCCAC  Raphanus raphanistrum subsp. raphanistrum (MS)

               501    -    551
UN23500        --> AGCAAGACATTTTT-CTCGAGAAAGTTTAAAGAAAGATCCCAACTCGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD569786       <-- AGCAAGACATTTTT-CTCGAGAAAGTTTAAAGAAATATCCCAACTCGAAA  Raphanus sativus cv Early Scarlet Globe
FD940006       <-- AGCAAGACATTTTT-CTCGAGAAAGTTTAAAGAAAGATCCCAACTCGAAA  Raphanus sativus var. oleiformis
EY914677       <-- AGCAAGACATTTTTTCTCGAGAAAGTTCAAAGAAAGA-CCTAACTCGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989979       <-- AGCAAGACATTTTTTCTCGAGAAAGTTCAAAGAAAGA-CCTAACTCGAAA  Raphanus raphanistrum subsp. landra
FD954960       <-- AGCAAGACATTTTT-CTCGAGAAAGTTTAAAGAAAGATCCCAACTCGAAA  Raphanus sativus cv Rat-Tail Radish #3870
EY921672       <-- AGCAAGACATTTTT-CTCGAGAAAGTTTAAAGAAAGATCCCAACTCGAAA  Raphanus raphanistrum subsp. landra
EX890285       <-- AGCAAGACATTTTT-CTCGAGAAAGTTTAAAGAAAGATCCCAACTCGAAA  Raphanus sativus var. oleiformis
EY908441       <-- AGCAAGGCATTTTT-CTCGAGAAAGTTTAAAGAAATATCCCAACTCGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY908820       <-- AGCAAGAGATTTTT-CTCGAGAAAGTTTAAAGAAATATCCCAACTCGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540022       <-- AGCAAGACATTTTT-CTCGAGAAAGTTTAAAGAAATATCCCAACTCGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV527728       <-- AGCAAGACATTTTTTCTCGAGAAAGTTCAAAGAAAGA-CCTAACTCGAAA  Raphanus raphanistrum subsp. maritimus
FD573918       --> AGCAAGACATTTTT-CTCGAGAAAGTTTAAAGAAATATCCCAACTCGAAA  Raphanus sativus cv Early Scarlet Globe
FD985695       --> ..................................................  Raphanus raphanistrum subsp. landra
EX893835       --> AGCAAGACATTTTT-CTCGAGAAAGTTTAAAGAAAGATCCCAACTCGAAA  Raphanus sativus var. oleiformis
EY904134       --> AGCAAGGCATTTTT-CTCGAGAAAGTTTAAAGAAATATCCCAACTCGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536605       --> AGCAAGACATTTTT-CTCGAGAAAGTTTAAAGAAATATCCCAACTCGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)

               551    -    601
UN23500        --> GAGAATTAACCAAAAGTTTTATCGCAAATGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD569786       <-- GAGAATTAACCAAAAGTTTTATCGCAAATGGCC
FD940006       <-- GAGAATTAACCAAAAGTTTTATCGCAAAatcc.
EY914677       <-- GAGAATTA.........................
FD989979       <-- GAGAATTA.........................
FD954960       <-- GAGAATTAACCAAAAGTTTTATCGCcc......
EY921672       <-- GAGAATTAACCAAAAGTTTTATCGCAAATccc.
EX890285       <-- GAGAATTAACCAAAAGTTTTATCGCAAATcc..
EY908441       <-- GAGAATTAACCAAAAGTTTCATCGCcac.....
EY908820       <-- GAGAATTAACCAAAAGTTTTATCGCc.......
FD540022       <-- GAGAATTAACCAAAAGTTTTATCGCAAATcc..
EV527728       <-- GAGAATTA.........................
FD573918       --> .................................
FD985695       --> .................................
EX893835       --> GAGAATTAACCAAAAGTTTTATCGCAAATcc..
EY904134       --> GAGAATTAACCAAAAGTTTCATCGCcac.....
FD536605       --> GAGAATTAACCAAAAGTTTTATCGCAAATcc..