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Alignment for radish unigene UN23501

               1      -     51
UN23501        --> GATAAGAGGCCATGTTACATCTTCGATGATGAAGATGTTTTAGCATTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- GATAAGAGGCCATGTTACATCTTCGATGATGAAGATGTTTTAGCATTTTT
EW729420       <-- ..................................................
FD574571       <-- ..................................................
EV542257       <-- ..................................................
FD544374       <-- ..................................................
FD969174       <-- ..................................................
EV542179       <-- ..................................................
EY902149       <-- ..................................................
FD565597       <-- ..................................................
EV544493       <-- ..................................................
EY909275       <-- ..................................................
FD539738       <-- ..................................................
FD966365       <-- ..................................................
FD952573       <-- ..................................................
EY912955       --> ..................................................
FD955047       --> ..................................................
FD561432       --> ..................................................
FD570600       --> ..................................................
FD973489       --> ..................................................
FD548149       --> ..................................................
EW726805       --> ..................................................
FD544051       --> ..................................................
FD969863       --> ..................................................
EV548905       --> ..................................................
EY947882       --> ..................................................
EY905805       --> ..................................................
EY912977       --> ..................................................
FD579806       --> ..................................................
FD956762       --> ..................................................
EY914230       --> ..................................................
EV538088       --> ..................................................
EV538184       --> ..................................................
FD962753       --> ..................................................
FD947810       --> ..................................................

               51     -    101
UN23501        --> GTTGGAAGTCGAAAAAAATCAGGGGCGTATTATCTTGCACGTCGAGTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- GTTGGAAGTCGAAAAAAATCAGGGGCGTATTATCTTGCACGTCGAGTTCC
EW729420       <-- ..................................................
FD574571       <-- ..................................................
EV542257       <-- ..................................................
FD544374       <-- ..................................................
FD969174       <-- ..................................................
EV542179       <-- ..................................................
EY902149       <-- ..................................................
FD565597       <-- ..................................................
EV544493       <-- ..................................................
EY909275       <-- ..................................................
FD539738       <-- ..................................................
FD966365       <-- ..................................................
FD952573       <-- ..................................................
EY912955       --> ..................................................
FD955047       --> ..................................................
FD561432       --> ..................................................
FD570600       --> ..................................................
FD973489       --> ..................................................
FD548149       --> ..................................................
EW726805       --> ..................................................
FD544051       --> ..................................................
FD969863       --> ..................................................
EV548905       --> ..................................................
EY947882       --> ..................................................
EY905805       --> ..................................................
EY912977       --> ..................................................
FD579806       --> ..................................................
FD956762       --> ..................................................
EY914230       --> ..................................................
EV538088       --> ..................................................
EV538184       --> ..................................................
FD962753       --> ..................................................
FD947810       --> ..................................................

               101    -    151
UN23501        --> CAGAACCTGGTTTAGAAAATCAGAGTAATGAGATGTTTTCTAGGGATCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- CAGAACCTGGTTTAGAAAATCAGAGTAATGAGATGTTTTCTAGGGATCAG
EW729420       <-- ..................................................
FD574571       <-- ..................................................
EV542257       <-- ..................................................
FD544374       <-- ..................................................
FD969174       <-- ..................................................
EV542179       <-- ..................................................
EY902149       <-- ..................................................
FD565597       <-- ..................................................
EV544493       <-- ..................................................
EY909275       <-- ..................................................
FD539738       <-- ..................................................
FD966365       <-- ..................................................
FD952573       <-- ..................................................
EY912955       --> ..................................................
FD955047       --> ..................................................
FD561432       --> ..................................................
FD570600       --> ..................................................
FD973489       --> ..................................................
FD548149       --> ..................................................
EW726805       --> ..................................................
FD544051       --> ..................................................
FD969863       --> ..................................................
EV548905       --> ..................................................
EY947882       --> ..................................................
EY905805       --> ..................................................
EY912977       --> ..................................................
FD579806       --> ..................................................
FD956762       --> ..................................................
EY914230       --> ..................................................
EV538088       --> ..................................................
EV538184       --> ..................................................
FD962753       --> ..................................................
FD947810       --> ..................................................

               151    -    201
UN23501        --> AAGATTCTTAGTGATACAAGAGTTAATGATGATATGGTCGGTCTTAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- AAGATTCTTAGTGATACAAGAGTTAATGATGATATGGTCGGTCTTAAAAA
EW729420       <-- ..................................................
FD574571       <-- ..................................................
EV542257       <-- ..................................................
FD544374       <-- ..................................................
FD969174       <-- ..................................................
EV542179       <-- ..................................................
EY902149       <-- ..................................................
FD565597       <-- ..................................................
EV544493       <-- ..................................................
EY909275       <-- ..................................................
FD539738       <-- ..................................................
FD966365       <-- ..................................................
FD952573       <-- ..................................................
EY912955       --> ..................................................
FD955047       --> ..................................................
FD561432       --> ..................................................
FD570600       --> ..................................................
FD973489       --> ..................................................
FD548149       --> ..................................................
EW726805       --> ..................................................
FD544051       --> ..................................................
FD969863       --> ..................................................
EV548905       --> ..................................................
EY947882       --> ..................................................
EY905805       --> ..................................................
EY912977       --> ..................................................
FD579806       --> ..................................................
FD956762       --> ..................................................
EY914230       --> ..................................................
EV538088       --> ..................................................
EV538184       --> ..................................................
FD962753       --> ..................................................
FD947810       --> ..................................................

               201    -    251
UN23501        --> GTTGACGATTATTCCTCATATTCGAGAGGATGAGAATGAGAAAAGCGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- GTTGACGATTATTCCTCATATTCGAGAGGATGAGAATGAGAAAAGCGATG
EW729420       <-- ..................................................
FD574571       <-- ..................................................
EV542257       <-- ..................................................
FD544374       <-- ..................................................
FD969174       <-- ..................................................
EV542179       <-- ..................................................
EY902149       <-- ..................................................
FD565597       <-- ..................................................
EV544493       <-- ..................................................
EY909275       <-- ..................................................
FD539738       <-- ..................................................
FD966365       <-- ..................................................
FD952573       <-- ..................................................
EY912955       --> ..................................................
FD955047       --> ..................................................
FD561432       --> ..................................................
FD570600       --> ..................................................
FD973489       --> ..................................................
FD548149       --> ..................................................
EW726805       --> ..................................................
FD544051       --> ..................................................
FD969863       --> ..................................................
EV548905       --> ..................................................
EY947882       --> ..................................................
EY905805       --> ..................................................
EY912977       --> ..................................................
FD579806       --> ..................................................
FD956762       --> ..................................................
EY914230       --> ..................................................
EV538088       --> ..................................................
EV538184       --> ..................................................
FD962753       --> ..................................................
FD947810       --> ..................................................

               251    -    301
UN23501        --> AAGTGGGTACTGAAAGAGATTATATGGAGAATTTGGCAGTTGTTACACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- AAGTGGGTACTGAAAGAGATTATATGGAGAATTTGGCAGTTGTTACACCA
EW729420       <-- ..................................................
FD574571       <-- ..................................................
EV542257       <-- ..................................................
FD544374       <-- ..................................................
FD969174       <-- ..................................................
EV542179       <-- ..................................................
EY902149       <-- ..................................................
FD565597       <-- ..................................................
EV544493       <-- ..................................................
EY909275       <-- ..................................................
FD539738       <-- ..................................................
FD966365       <-- ..................................................
FD952573       <-- ..................................................
EY912955       --> ..................................................
FD955047       --> ..................................................
FD561432       --> ..................................................
FD570600       --> ..................................................
FD973489       --> ..................................................
FD548149       --> ..................................................
EW726805       --> ..................................................
FD544051       --> ..................................................
FD969863       --> ..................................................
EV548905       --> ..................................................
EY947882       --> ..................................................
EY905805       --> ..................................................
EY912977       --> ..................................................
FD579806       --> ..................................................
FD956762       --> ..................................................
EY914230       --> ..................................................
EV538088       --> ..................................................
EV538184       --> ..................................................
FD962753       --> ..................................................
FD947810       --> ..................................................

               301    -    351
UN23501        --> TCTGAAGCACCAGCTGAAGCAACAGTTGAGGCCCCAGTTAAAGCACCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- TCTGAAGCACCAGCTGAAGCAACAGTTGAGGCCCCAGTTAAAGCACCAAA
EW729420       <-- ..................................................
FD574571       <-- ..................................................
EV542257       <-- ..................................................
FD544374       <-- ..................................................
FD969174       <-- ..................................................
EV542179       <-- ..................................................
EY902149       <-- ..................................................
FD565597       <-- ..................................................
EV544493       <-- ..................................................
EY909275       <-- ..................................................
FD539738       <-- ..................................................
FD966365       <-- ..................................................
FD952573       <-- ..................................................
EY912955       --> ..................................................
FD955047       --> ..................................................
FD561432       --> ..................................................
FD570600       --> ..................................................
FD973489       --> ..................................................
FD548149       --> ..................................................
EW726805       --> ..................................................
FD544051       --> ..................................................
FD969863       --> ..................................................
EV548905       --> ..................................................
EY947882       --> ..................................................
EY905805       --> ..................................................
EY912977       --> ..................................................
FD579806       --> ..................................................
FD956762       --> ..................................................
EY914230       --> ..................................................
EV538088       --> ..................................................
EV538184       --> ..................................................
FD962753       --> ..................................................
FD947810       --> ..................................................

               351    -    401
UN23501        --> ATTTTGGAAAATTGAGTGAAGCAAAAATCGTGTATCTACATTTTAAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- ATTTTGGAAAATTGAGTGAAGCAAAAATCGTGTATCTACATTTTAAAAAA
EW729420       <-- ..................................................
FD574571       <-- ..................................................
EV542257       <-- ..................................................
FD544374       <-- ..................................................
FD969174       <-- ..................................................
EV542179       <-- ..................................................
EY902149       <-- ..................................................
FD565597       <-- ..................................................
EV544493       <-- ..................................................
EY909275       <-- ..................................................
FD539738       <-- ..................................................
FD966365       <-- ..................................................
FD952573       <-- ..................................................
EY912955       --> ..................................................
FD955047       --> ..................................................
FD561432       --> ..................................................
FD570600       --> ..................................................
FD973489       --> ..................................................
FD548149       --> ..................................................
EW726805       --> ..................................................
FD544051       --> ..................................................
FD969863       --> ..................................................
EV548905       --> ..................................................
EY947882       --> ..................................................
EY905805       --> ..................................................
EY912977       --> ..................................................
FD579806       --> ..................................................
FD956762       --> ..................................................
EY914230       --> ..................................................
EV538088       --> ..................................................
EV538184       --> ..................................................
FD962753       --> ..................................................
FD947810       --> ..................................................

               401    -    451
UN23501        --> AAAAGCAGAATTTAGAAAGTAATTTAATTGAGTTAGATGTAATCGAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- AAAAGCAGAATTTAGAAAGTAATTTAATTGAGTTAGATGTAATCGAGAAA
EW729420       <-- ..................................................
FD574571       <-- ..................................................
EV542257       <-- ..................................................
FD544374       <-- ..................................................
FD969174       <-- ..................................................
EV542179       <-- ..................................................
EY902149       <-- ..................................................
FD565597       <-- ..................................................
EV544493       <-- ..................................................
EY909275       <-- ..................................................
FD539738       <-- ..................................................
FD966365       <-- ..................................................
FD952573       <-- ..................................................
EY912955       --> ..................................................
FD955047       --> ..................................................
FD561432       --> ..................................................
FD570600       --> ..................................................
FD973489       --> ..................................................
FD548149       --> ..................................................
EW726805       --> ..................................................
FD544051       --> ..................................................
FD969863       --> ..................................................
EV548905       --> ..................................................
EY947882       --> ..................................................
EY905805       --> ..................................................
EY912977       --> ..................................................
FD579806       --> ..................................................
FD956762       --> ..................................................
EY914230       --> ..................................................
EV538088       --> ..................................................
EV538184       --> ..................................................
FD962753       --> ..................................................
FD947810       --> ..................................................

               451    -    501
UN23501        --> AATATATGTTAATTAAATATGAGTTTCCAGTTAATTATAAAATATAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- AATATATGTTAATTAAATATGAGTTTCCAGTTAATTATAAAATATAAAAA
EW729420       <-- ..................................................
FD574571       <-- ..................................................
EV542257       <-- ..................................................
FD544374       <-- ..................................................
FD969174       <-- ..................................................
EV542179       <-- ..................................................
EY902149       <-- ..................................................
FD565597       <-- ..................................................
EV544493       <-- ..................................................
EY909275       <-- ..................................................
FD539738       <-- ..................................................
FD966365       <-- ..................................................
FD952573       <-- ..................................................
EY912955       --> ..................................................
FD955047       --> ..................................................
FD561432       --> ..................................................
FD570600       --> ..................................................
FD973489       --> ..................................................
FD548149       --> ..................................................
EW726805       --> ..................................................
FD544051       --> ..................................................
FD969863       --> ..................................................
EV548905       --> ..................................................
EY947882       --> ..................................................
EY905805       --> ..................................................
EY912977       --> ..................................................
FD579806       --> ..................................................
FD956762       --> ..................................................
EY914230       --> ..................................................
EV538088       --> ..................................................
EV538184       --> ..................................................
FD962753       --> ..................................................
FD947810       --> ..................................................

               501    -    551
UN23501        --> GGTAGTGGCATTTCTCTGTAAATAACTCTTAAAACTAAGGGCAGAATTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- GGTAGTGGCATTTCTCTGTAAATAACTCTTAAAACTAAGGGCAGAATTCT
EW729420       <-- ..................................................
FD574571       <-- ..................................................
EV542257       <-- ..................................................
FD544374       <-- ..................................................
FD969174       <-- ..................................................
EV542179       <-- ..................................................
EY902149       <-- ..................................................
FD565597       <-- ..................................................
EV544493       <-- ..................................................
EY909275       <-- ..................................................
FD539738       <-- ..................................................
FD966365       <-- ..................................................
FD952573       <-- ..................................................
EY912955       --> ..................................................
FD955047       --> ..................................................
FD561432       --> ..................................................
FD570600       --> ..................................................
FD973489       --> ..................................................
FD548149       --> ..................................................
EW726805       --> ..................................................
FD544051       --> ..................................................
FD969863       --> ..................................................
EV548905       --> ..................................................
EY947882       --> ..................................................
EY905805       --> ..................................................
EY912977       --> ..................................................
FD579806       --> ..................................................
FD956762       --> ..................................................
EY914230       --> ..................................................
EV538088       --> ..................................................
EV538184       --> ..................................................
FD962753       --> ..................................................
FD947810       --> ..................................................

               551    -    601
UN23501        --> AATAGGAATTCTGCTTTAATAGTATTAGATAATATATAATATCCAACGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- AATAGGAATTCTGCTTTAATAGTATTAGATAATATATAATATCCAACGAT
EW729420       <-- ..................................................
FD574571       <-- ..................................................
EV542257       <-- ..................................................
FD544374       <-- ..................................................
FD969174       <-- ..................................................
EV542179       <-- ..................................................
EY902149       <-- ..................................................
FD565597       <-- ..................................................
EV544493       <-- ..................................................
EY909275       <-- ..................................................
FD539738       <-- ..................................................
FD966365       <-- ..................................................
FD952573       <-- ..................................................
EY912955       --> ..................................................
FD955047       --> ..................................................
FD561432       --> ..................................................
FD570600       --> ..................................................
FD973489       --> ..................................................
FD548149       --> ..................................................
EW726805       --> ..................................................
FD544051       --> ..................................................
FD969863       --> ..................................................
EV548905       --> ..................................................
EY947882       --> ..................................................
EY905805       --> ..................................................
EY912977       --> ..................................................
FD579806       --> ..................................................
FD956762       --> ..................................................
EY914230       --> ..................................................
EV538088       --> ..................................................
EV538184       --> ..................................................
FD962753       --> ..................................................
FD947810       --> ..................................................

               601    -    651
UN23501        --> TCATTGTCTTCCAAAATTTTCTCTACAGATTTTTTAAATTTTATTATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- TCATTGTCTTCCAAAATTTTCTCTACAGATTTTTTAAATTTTATTATTTT
EW729420       <-- ..................................................
FD574571       <-- ..................................................
EV542257       <-- ..................................................
FD544374       <-- ..................................................
FD969174       <-- ..................................................
EV542179       <-- ..................................................
EY902149       <-- ..................................................
FD565597       <-- ..................................................
EV544493       <-- ..................................................
EY909275       <-- ..................................................
FD539738       <-- ..................................................
FD966365       <-- ..................................................
FD952573       <-- ..................................................
EY912955       --> .............................TTTTTTAAATTTTATTATTTT
FD955047       --> ............................tTTTTTTAAATTTTATTATTTT
FD561432       --> ..................................................
FD570600       --> ..................................................
FD973489       --> ..................................................
FD548149       --> ..................................................
EW726805       --> ..................................................
FD544051       --> ..................................................
FD969863       --> ..................................................
EV548905       --> ..................................................
EY947882       --> ..................................................
EY905805       --> ..................................................
EY912977       --> ..................................................
FD579806       --> ..................................................
FD956762       --> ..................................................
EY914230       --> ..................................................
EV538088       --> ..................................................
EV538184       --> ..................................................
FD962753       --> ..................................................
FD947810       --> ..................................................

               651    -    701
UN23501        --> CTGTGGACAATGTACTTTAGCTTCTTCACCCTCTGATTGGAGATAACAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- CTGTGGACAATGTACTTTAGCTTCTTCACCCTCTGATTGGAGATAACAGT
EW729420       <-- ..................................................
FD574571       <-- ..................................................
EV542257       <-- ..................................................
FD544374       <-- ..................................................
FD969174       <-- ..................................................
EV542179       <-- ..................................................
EY902149       <-- ..................................................
FD565597       <-- ..................................................
EV544493       <-- ..................................................
EY909275       <-- ..................................................
FD539738       <-- ..................................................
FD966365       <-- ..................................................
FD952573       <-- ..................................................
EY912955       --> CTGTGGACAATGTACTTTAGCTTCTTCACCCTCTGATTGGAGATAACAGT
FD955047       --> CTGTGGACAATGTACTTTAGCTTCTTCACCCTCTAATTGGAGATAACAGT
FD561432       --> ..........................................ggAACAGT
FD570600       --> ..........................................ggAACAGT
FD973489       --> .............................................ggAGT
FD548149       --> ..............................................ggGT
EW726805       --> ..................................................
FD544051       --> ..................................................
FD969863       --> ..................................................
EV548905       --> ..................................................
EY947882       --> ..................................................
EY905805       --> ..................................................
EY912977       --> ..................................................
FD579806       --> ..................................................
FD956762       --> ..................................................
EY914230       --> ..................................................
EV538088       --> ..................................................
EV538184       --> ..................................................
FD962753       --> ..................................................
FD947810       --> ..................................................

               701    -    751
UN23501        --> GTCAGAGCCGAAACAACGTAGCCAAAAA-AAAA-AAAAA---AACAGAG-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- GTCAGAGCCGAAACAACGTAacc...........................  Raphanus sativus var. oleiformis
EW729420       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD574571       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV542257       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544374       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969174       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542179       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902149       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD565597       <-- ..................................................  Raphanus sativus var. oleiformis
EV544493       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909275       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539738       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966365       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952573       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY912955       --> GTCAGAGCCGAAACAACGTAACCAAAAA-AAAA-AAAAA---A-CAGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD955047       --> GTCAGAGCCGAAACAACGTAGCCAAAAA-GAAA-AAAAA---A-CAGCG-  Raphanus sativus cv Rat-Tail Radish #3870
FD561432       --> GTCAGAGCCGAAACAACGTAACCAAAAA-AAAA-AAAAA---AACAGAGC  Raphanus sativus var. oleiformis
FD570600       --> GTCAGAGCCGAAACAACGTAGCCAAAAA-GAAA-AAAAA---AACAGCG-  Raphanus sativus cv Early Scarlet Globe
FD973489       --> GTCAGAGCCGAAACAACGTAGCCAAAAAGAAAAGAAAAAGGCAACAAAG-  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548149       --> GTCAGAGCCGAAACAACGTAGCCAAAAA-GAAA-AAAAA---AACAGCG-  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726805       --> .ggAGAGCCGAAACAACGTAGCCAAAAA-GAAA-AAAAA---A-CAGCG-  Raphanus sativus cv Early Scarlet Globe
FD544051       --> .ggAGAGCCGAAACAACGTAGCCAAAAAGAAAAGAAAAAGGCAACAAAG-  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969863       --> gggAGAGCCGAAACAACGTAGCCAAAAAGAAAAGAAAAAGGCAACAAAG-  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548905       --> ....ggGCCGAAACAACGTAGCCAAAAA-AAAA-AAAAA---AACAGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY947882       --> ........gGAAACAACGTAGCCAAAAA-AAAA-AAAAA---A-CAGAGC  Raphanus sativus cv Rat-Tail Radish #3870
EY905805       --> .............gAACGTAGCCAAAAAGAAAAGAAAAAGGCAACAAAG-  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912977       --> ............ggAACGTAGCCAAAAA-AAAA-AAAAA-----CAGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579806       --> ............ggAACGTAGCCAAAAA-GAAA-AAAAA---A-CAGCG-  Raphanus sativus cv Rat-Tail Radish #3870
FD956762       --> ...........gggAACGTAGCCAAAAA-GAAA-AAAAA---AACAGCG-  Raphanus sativus cv Rat-Tail Radish #3870
EY914230       --> .............ggACGTAGCCAAAAA-GAAA-AAAAA---A-CAGCG-  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538088       --> .....gggaacgtagccaaaaagAAAAA-AAAA-ACAAC---AACAGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538184       --> ............ggagccaaaaagAAAA-GAAA-AAGGC---AACAAAG-  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962753       --> .......................ggAAA-GAAA-AAAAA---AACAGCG-  Raphanus raphanistrum subsp. maritimus
FD947810       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               751    -    801
UN23501        --> AAAATGTCTGTCTTCTTACGCGGAGGAATCGCCGGAGGATTTCTTATCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- ..................................................  Raphanus sativus var. oleiformis
EW729420       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD574571       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV542257       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544374       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969174       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542179       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902149       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD565597       <-- ..................................................  Raphanus sativus var. oleiformis
EV544493       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909275       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539738       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966365       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952573       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY912955       --> AAAATGTCTGTCTTCTTACGCGGAGGAATCGCGGGAGGATTTCTTATCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD955047       --> AAAATGTCTGTCTTCTTACGCGGAGGAATCGCCGGAGGATTTCTTATCCG  Raphanus sativus cv Rat-Tail Radish #3870
FD561432       --> AAAATGTCTGTCTTCTTACGCGGAGGAATCGCGGGAGGATTTCTTATCCA  Raphanus sativus var. oleiformis
FD570600       --> AAAATGTCTGTCTTCTTACGCGGAGGAATCGCCGGAGGATTTCTTATCCG  Raphanus sativus cv Early Scarlet Globe
FD973489       --> AAAATGTCTGTCTTCTTACGCGGAGGAATCGCTGGAGGATTTCTTATCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548149       --> AAAATGTCTGTCTTCTTACGCGGAGGAATCGCCGGAGGATTTCTTATCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726805       --> AAAATGCCTGTCTTCTTACGCGGAGGAATCGCCGGAGGATTTCTTATCCG  Raphanus sativus cv Early Scarlet Globe
FD544051       --> AAAATGTCTGTCTTCTTACGCGGAGGAATCGCTGGAGGATTTCTTATCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969863       --> AAAATGTCTGTCTTCTTACGCGGAGGAATCGCTGGAGGATTTCTCATCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548905       --> AAAATGTCTGTCTTCTTACGCGGAGGAATCGCCGGAGGATTTCTTATCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY947882       --> AAAATGTCTGTCTTCTTACGCGGAGGAATCGCCGGAGGATTTCTTATTCG  Raphanus sativus cv Rat-Tail Radish #3870
EY905805       --> AAAATGTCTGTCTTCTTACGCGGAGGAATCGCTGGAGGATTTCTTATCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912977       --> AAAATGTCTGTCTTCTTACGCGGAGGAATCGCCGGAGGATTTCTTATCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579806       --> AAAATGTCTGTCTTCTTACGCGGAGGAATCGCCGGAGGATTTCTTATCCG  Raphanus sativus cv Rat-Tail Radish #3870
FD956762       --> AAAATGTCTGTCTTCTTACGCGGAGGAATCGCCGGAGGATTTCTTATCCG  Raphanus sativus cv Rat-Tail Radish #3870
EY914230       --> AAAATGTCTGTCTTCTTACGCGGAGGAATCGCCGGAGGATTTCTTATCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538088       --> AAAATGTCTGTCTTCTTACGCGGAGGAATCGCGGGAGGATTTCTTATCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538184       --> AAAATGTCTGTCTTCTTACGCGGAGGAATCGCTGGAGGATTTCTTATCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962753       --> AAAATGTCTGTCTTCTTACGCGGAGGAATCGCCGGAGGATTTCTTATCCG  Raphanus raphanistrum subsp. maritimus
FD947810       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               801    -    851
UN23501        --> TAGTCGTGACACCTCAGCCGTCATCACAAAACAACGACGAATCTCATCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- ..................................................  Raphanus sativus var. oleiformis
EW729420       <-- ..........................CAAAACAACGACGAATCTCATCCG  Raphanus sativus cv Early Scarlet Globe
FD574571       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV542257       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544374       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969174       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542179       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902149       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD565597       <-- ..................................................  Raphanus sativus var. oleiformis
EV544493       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909275       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539738       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966365       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952573       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY912955       --> TAGTCGTGACACCTCAGCCGTCATCACAAAACAACGACGAATCTCATCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD955047       --> TAGTCGTGACACCTCAGCCGTCATCACAAAACAACGACGAATCTCATCCG  Raphanus sativus cv Rat-Tail Radish #3870
FD561432       --> TAGTCGTGACACCTCAGCCGTCATCACAAAACAACGACGAATCTCATCCG  Raphanus sativus var. oleiformis
FD570600       --> TAGTCGTGACACCTCAGCCGTCATCACAAAACAACGACGAATCTCATCCG  Raphanus sativus cv Early Scarlet Globe
FD973489       --> TAGTCGTGACTCCTCAGCCGTCATCACAAAACAACGACGAATCTCATCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548149       --> TAGTCGTGACACCTCAGCCGTCATCACAAAACAACGACGAATCTCATCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726805       --> TAGTCGTGACACCTCAGCCTTCATCACAAAACAACGACGAATCTCATCCG  Raphanus sativus cv Early Scarlet Globe
FD544051       --> TAGTCGTGACTCCTCAGCCGTCATCACAAAACAACGACGAATCTCATCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969863       --> TAGTCGTGACTCCTCAGCCGTCATCACAAAACAACGACGAATCTCATCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548905       --> TAGTCGTGACACCTCAGCCGTCATCACAAAACAACGACGAATCTCATCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY947882       --> TAGTCGTGACACCTCAGCCGTCATCACAAAACAACGACGAATCTCATCCG  Raphanus sativus cv Rat-Tail Radish #3870
EY905805       --> TAGTCGTGACTCCTCAGCCGTCATTACAAAACAACGACGAATCTCATCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912977       --> TAGTCGTGACACCTCAGCCGTCATCACAAAACAACGACGAATCTCATCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579806       --> TAGTCGTGACACCTCAGCCGTCATCACAAAACAACGACGAATCTCATCCG  Raphanus sativus cv Rat-Tail Radish #3870
FD956762       --> TAGTCGTGACACCTCAGCCGTCATCACAAAACAACGACGAATCTCATCCG  Raphanus sativus cv Rat-Tail Radish #3870
EY914230       --> TAGTCGTGACACCTCAGCCGTCATCACAAAACAACGACGAATCTCATCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538088       --> TAGTCGTGACTCCTCAGCCGTCATCACAAAACAACGACGAATCTCATCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538184       --> TAGTCGTGACTCCTCAGCCGTCATCACAAAACAACGACGAATCTCATCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962753       --> TAGTCGTGACACCTCAGCCGTCATCACAAAACAACGACGAATCTCATCCG  Raphanus raphanistrum subsp. maritimus
FD947810       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               851    -    901
UN23501        --> TTGGAGCCGTAACAGGACCAAGCGTCAATCCAACGGCAGCCATTGAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- ..................................................
EW729420       <-- T-GGAGCCGTAACAGGACCAAGCGTCAATCCAACGGCAGCCATTGAACAA
FD574571       <-- ..GGAGC-GTAACAGGACCAAGCGTCAATCCAACGGCAGCCATTGAACAA
EV542257       <-- ...GAGCCGTAACAGGACCAAGCGTGAATCCAACGGCAGCCATTGAACAA
FD544374       <-- ...........ACAGGACCAAGCGTCAATCCAACGGCAGCCATTGAACAA
FD969174       <-- ...........ACAGGACCAAGCGTGAATCCAACGGCAGCCATTGAACAA
EV542179       <-- .................CCAAGCGTCAATCCAACGGCAGCCATTCCACAA
EY902149       <-- ..........................AATCCAACGGCAGCCATTGAACAA
FD565597       <-- ..................................................
EV544493       <-- ..................................................
EY909275       <-- ..................................................
FD539738       <-- ..................................................
FD966365       <-- ..................................................
FD952573       <-- ..................................................
EY912955       --> TTGGAGCCGTAACAGGACCAAGCGTCAATCCAACGGCAGCCATTGAACAA
FD955047       --> TTGGAGCCGTAACAGGACCAAGCGTCAATCCAACGGCAGCCATTGAACAA
FD561432       --> TTGGAGCCGTAACAGGACCAAGCGTCAATCCAACGGCAGCCATTGAACAA
FD570600       --> TTGGAGCCGTAACAGGACCAAGCGTCAATCCAACGGCAGCCATTGAACAA
FD973489       --> TTGGAGCCGTAACAGGACCAAGCGTGAATCCAACGGCAGCCATTGAACAA
FD548149       --> TTGGAGCCGTAACAGGACCAAGCGTCAATCCAACGGCAGCCATTGAACAA
EW726805       --> TTGGAGCCGTAACAGGACCAAGCGTCAATCCAACGGCAGCCATTGAACAA
FD544051       --> TTGGAGCCGTAACAGGACCAAGCGTGAATCCAACGGCAGCCATTGAACAA
FD969863       --> TTGGAGCCGTAACAGGACCAAGCGTGAATCCAACGGCAGCCATTGAACAA
EV548905       --> TTGGAGCCGTAACAGGACCAAGCGTCAATCCAACGGCAGCCATTGAACAA
EY947882       --> TTGGAGCCGTAACAGGACCAAGCGTCAATCCAACGGCATCCATTGAACAG
EY905805       --> TTGGAGCCATAACAGGACCAAGCGTGAATCCAACGGCAGCCATTGAACAA
EY912977       --> TTGGAGCCGTAACAGGACCAAGCGTCAATCCAACGGCAGCCATTGAACAA
FD579806       --> TTGGAGCCGTAACAGGACCAAGCGTCAATCCAACGGCAGCCATTGAACAA
FD956762       --> TTGGAGCCGTAACAGGACCAAGCGTCAATCCAACGGCAGCCATTGAACAA
EY914230       --> TTGGAGCCGTAACAGGACCAAGCGTCAATCCAACGGCAGCCATTGAACAA
EV538088       --> TTGGAGCCGTAACAGGACCAAGCGTCAATCCAACGGCAGCCATTCCACAA
EV538184       --> TTGGAGCCGTAACAGGACCAAGCGTGAATCCAACGGCAGCCATTGAACAA
FD962753       --> TTGGAGCCGTAACAGGACCAAGCGTCAATCCAACGGCAGCCTTTGAACAA
FD947810       --> .......gGTAACAGGACCAAGCGTCAATCCAACGGCAGCCATTGAACAA

               901    -    951
UN23501        --> CGTGCCACATGGCTACCTGGTCTCGAACCTCCACCTTACCTCGACGGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- ..................................................
EW729420       <-- CGTGCCACATGGCTACCTGGTCTCGAACCTCCACCTTACCTCGACGGAAA
FD574571       <-- CGTGCCACATGGCTACCTGGTCTCGAACCTCCACCTTACCCCGACGGAAA
EV542257       <-- CGTGCCACATGGCTACCTGGTCTCGAACCTCCACCTTACCTCGACGGAAA
FD544374       <-- CGTGCCACATGGCTACCTGGTCTCGAACCTCCACCTTACCTCGACGGAAA
FD969174       <-- CGTGCCACATGGCTACCTGGTCTCGAACCTCCACCTTACCTCGACGGAAA
EV542179       <-- CGTGCCACATGGCTACCTGGTCTCGAACCTCCACCTTACCTCGACGGAAA
EY902149       <-- CGTGCCACATGGCTACCTGGTCTCGAACCTCCACCTTACCTCGACGGAAA
FD565597       <-- ........................................TCGACGGAAA
EV544493       <-- ..................................................
EY909275       <-- ..................................................
FD539738       <-- ..................................................
FD966365       <-- ..................................................
FD952573       <-- ..................................................
EY912955       --> CGTGCCACATGGCTACCTGGTCTCGAACCTCCACCTTGCCTCGACGGAAA
FD955047       --> CGTGCCACATGGCTACCTGGTCTCGAACCTCCACCTTACCTCGACGGAAA
FD561432       --> CGTGCCACATGGCTACCTGGTCTCGAACCTCCACCTTACCTCGACGGAAA
FD570600       --> CGTGCCACATGGCTACCTGGTCTCGAACCTCCACCTTACCCCGACGGAAA
FD973489       --> CGTGCCACATGGCTACCTGGTCTCGAACCTCCACCTTACCTCGACGGAAA
FD548149       --> CGTGCCACATGGCTACCTGGTCTCGAACCTCCACCTTACCTCGACGGAAA
EW726805       --> CGTGCCACATGGCTACCTGGTCTCGAACCTCCACCTTACCTCGACGGAAA
FD544051       --> CGTGCCACATGGCTACCTGGTCTCGAACCTCCACCTTACCTCGACGGAAA
FD969863       --> CGTGCCACATGGCTACCTGGTCTCGAACCTCCACCTTACCTCGACGGAAA
EV548905       --> CGTGCCACATGGCTACCTGGTCTCGAACCTCCACCTTACCTCGACGGAAA
EY947882       --> CGTGCCACATGGCTACCTGGTCTCGAACCTCCACCTTACCTCGACGGAAA
EY905805       --> CGTGCCACATGGCTACCTGGTCTCGAACCTCCACCTTACCTCGACGGAAA
EY912977       --> CGTGCCACATGGCTACCTGGTCTCGAACCTCCACCTTACCTCGACGGAAA
FD579806       --> CGTGCCACATGGCTACCTGGTCTCGAACCTCCACCTTACCTCGACGGAAA
FD956762       --> CGTGCCACATGGCTACCTGGTCTCGAACCTCCACCTTACCTCGACGGAAA
EY914230       --> CGTGCCACATGGCTACCTGGTCTCGAACCTCCACCTTACCTCGACGGAAA
EV538088       --> CGTGCCACATGGCTACCTGGTCTCGAACCTCCACCTTACCTCGACGGAAA
EV538184       --> CGTGCCACATGGCTACCTGGTCTCGAACCTCCACCTTACCTCGACGGAAA
FD962753       --> CGTGCCACATGGCTACCTGGTCTCGAACCTCCACCTTACCTCGACGGAAA
FD947810       --> CGTGCCACATGGCTACCTGGTCTCGAACCTCCACCTTACCTCGACGGAAA

               951    -   1001
UN23501        --> GTTAGCTGGAGACTACGGGTTTGACCCGCTCGGGTTAGGAGAAGATCCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- ..................................................  Raphanus sativus var. oleiformis
EW729420       <-- GTTAGCTGGAGACTACGGGTTCGACCCACTCGGGTTAGGAGAAGATCCGA  Raphanus sativus cv Early Scarlet Globe
FD574571       <-- GTTAGCTGGAGACTACGGGTTCGACCCACTCGGGTTAGGAGAAGATCCGA  Raphanus sativus cv Early Scarlet Globe
EV542257       <-- GTTAGCTGGAGACTACGGGTTTGACCCGCTCGGGTTAGGAGAAGATCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544374       <-- GTTAGCTGGAGACTACGGGTTCGACCCACTCGGGTTAGGAGAAGATCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969174       <-- GTTAGCTGAAGACTACGGGTTTGACCCGCTCGGGTTAGGAGAAGATCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542179       <-- GTTAGCGGGAGACTACGGGTTTGACCCGCTCGGGTTAGGAGAAGATCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902149       <-- GTTAGCTGGAGACTACGGGTTTGACCCGCTCGGGTTAGGAGAAGACCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD565597       <-- GTTAGCTGGAGACTACGGGTTTGACCCGCTCGGGTTAGGAGAAGATCCGA  Raphanus sativus var. oleiformis
EV544493       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909275       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539738       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966365       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952573       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY912955       --> GTTAGCTGGAGACTACGGGTTTGACCCGCTCGGGTTAGGAGAAGATCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD955047       --> GTTAGCTGGAGACTACGGGTTCGACCCACTCGGGTTAGGAGAAGATCCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD561432       --> GTTAGCTGGAGACTACGGGTTTGACCCGCTCGGGTTAGGAGAAGATCCGA  Raphanus sativus var. oleiformis
FD570600       --> GTTAGCTGGAGACTACGGGTTCGACCCACTCGGGTTAGGAGAAGATCCGA  Raphanus sativus cv Early Scarlet Globe
FD973489       --> GTTAGCTGAAGACTACGGGTTTGACCCGCTCGGGTTAGGAGAAGATCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548149       --> GTTAGCTGGAGACTACGGGTTCGACCCACTCGGGTTAGGAGAAGATCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726805       --> GTTAGCTGGAGACTACGGGTTCGACCCACTCGGGTTAGGAGAAGATCCGA  Raphanus sativus cv Early Scarlet Globe
FD544051       --> GTTAGCTGGAGACTACGGGTTTGACCCGCTCGGGTTAGGAGAAGATCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969863       --> GTTAGCTGGAGACTACGGGTTTGACCCGCTCGGGTTAGGAGAAGATCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548905       --> GTTAGCTGGAGACTACGGGTTTGACCCGCTCGGGTTAGGAGAAGATCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY947882       --> GTTAGCTGGAGACTACGGGTTCGACCCACTCGGGTTAGGAGAAGATCCGA  Raphanus sativus cv Rat-Tail Radish #3870
EY905805       --> GTTAGCTGGAGACTACGGGTTTGACCCGCTCGGGTTAGGAGAAGACCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912977       --> GTTAGCTGGAGACTACGGGTTTGACCCGCTCGGGTTAGGAGAAGATCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579806       --> GTTAGCTGGAGACTACGGGTTCGACCCACTCGGGTTAGGAGAAGATCCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD956762       --> GTTAGCTGGAGACTACGGGTTCGGCCCACTCGGGTTAGGAGAAGATCCGA  Raphanus sativus cv Rat-Tail Radish #3870
EY914230       --> GTTAGCTGGAGACTACGGGTTCGACCCACTCGGGTTAGGAGAAGATCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538088       --> GTTAGCGGGAGACTACGGGTTTGACCCGCTCGGGTTAGGAGAAGATCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538184       --> GTTAGCTGGAGACTACGGGTTTGACCCGCTCGGGTTAGGAGAAGATCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962753       --> GTTAGCTGGAGACTACGGGTTTGACCCGCTCGGGTTAGGAGAAGATCCGA  Raphanus raphanistrum subsp. maritimus
FD947810       --> GTTAGCTGGAGACTACGGGTTCGACCCACTCGGGTTAGGAGAAGATCCGA  Raphanus sativus cv Early Scarlet Globe

               1001   -   1051
UN23501        --> AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- ..................................................
EW729420       <-- AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCC
FD574571       <-- AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCC
EV542257       <-- AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCC
FD544374       <-- AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCC
FD969174       <-- AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCC
EV542179       <-- AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCC
EY902149       <-- AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCC
FD565597       <-- AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCC
EV544493       <-- ..................................................
EY909275       <-- ..................................................
FD539738       <-- ..................................................
FD966365       <-- ..................................................
FD952573       <-- ..................................................
EY912955       --> AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCT
FD955047       --> AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCC
FD561432       --> AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCC
FD570600       --> AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCC
FD973489       --> AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCC
FD548149       --> AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCC
EW726805       --> AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCC
FD544051       --> AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCC
FD969863       --> AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCC
EV548905       --> AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCT
EY947882       --> AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCC
EY905805       --> AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCC
EY912977       --> AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCT
FD579806       --> AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCC
FD956762       --> AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCC
EY914230       --> AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCC
EV538088       --> AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCC
EV538184       --> AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCC
FD962753       --> AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCC
FD947810       --> AAAGCTTGAAATGGTATGTTCAAGCAGAGCTTGTCCATGCTCGTTTCGCC

               1051   -   1101
UN23501        --> ATGCTTGGTGTTGCCGGAATACTCTTCACGGATCTACTTCGTACCACAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- ..................................................
EW729420       <-- ATGCTTGGTGTTGCCGGAATACTCTTCACGGATCTACTTCGTACCACAGG
FD574571       <-- ATGCTTGGTGTTGCCGGAATACTCTTCACGGATCTACTTCGTACCACAGG
EV542257       <-- ATGCTTGGTGTTGCCGGAATACTCTTCACAGATCTACTTCGTACCACGGG
FD544374       <-- ATGCTTGGTGTTGCCGGAATACTCTTCACGGATCTACTTCGTACCACAGG
FD969174       <-- ATGCTTGGTGTTGCCGGAATACTCTTCACAGATCTACTTCGTACCACGGG
EV542179       <-- ATGCTTGGTGTTGCCGGAATACTCTTCACGGACTTACTTCGTACCACAAG
EY902149       <-- ATGCTTGGTGTTGCCGGAATACTCTTCACAGATCTACTTCGTACCACGGG
FD565597       <-- ATGCTTGGTGTTGCCGGAATACTCTTCACGGATCTACTTCGTACCACAGG
EV544493       <-- .....TGGTGTTGCCGGAATACTTTTCACGGATTTACTTCGTACCACAGG
EY909275       <-- ...........................................CCACAGG
FD539738       <-- ..................................................
FD966365       <-- ..................................................
FD952573       <-- ..................................................
EY912955       --> ATGCTTGGTGTTGCCGGAATACTCTTCACGGATCTACTTCGTACCACAGG
FD955047       --> ATGCTTGGTGTTGCCGGAATACTCTTCACGGATCTACTTCGTACCACAGG
FD561432       --> ATGCTTGGTGTTGCCGGAATACTCTTCACGGATCTACTTCGTACCACAGG
FD570600       --> ATGCTTGGTGTTGCCGGAATACTCTTCACGGATCTACTTCGTACCACAGG
FD973489       --> ATGCTTGGTGTTGCCGGAATACTCTTCACAGATCTACTTCGTACCACGGG
FD548149       --> ATGCTTGGTGTTGCCGGAATACTCTTCACGGATCTACTTCGTACCACAGG
EW726805       --> ATGCTTGGTGTTGCCGGAATACTCTTCACGGATCTACTTCGTACCACAGG
FD544051       --> ATGCTTGGTGTTGCCGGAATACTCTTCACAGATCTACTTCGTACCACGGG
FD969863       --> ATGCTTGGTGTTGCCGGAATACTCTTCACAGATCTACTTCGTACCACGGG
EV548905       --> ATGCTTGGTGTTGCCGGAATACTCTTCACGGATCTACTTCGTACCACAGG
EY947882       --> ATGCTTGGTGTTGCCGGAATACTCTTCACGGATCTACTTCGTACCACAGG
EY905805       --> ATGCTTGGTGTTGCCGGAATACTCTTCACAGATCTACTTCGTACCACGGG
EY912977       --> ATGCTTGGTGTTGCCGGAATACTCTTCACGGATCTACTTCGTACCACAGG
FD579806       --> ATGCTTGGTGTTGCCGGAATACTCTTCACGGATCTACTTCGTACCACAGG
FD956762       --> ATGCTTGGTGTTGCCGGAATACTCTTCACGGATCTACTTCGTACCACAGG
EY914230       --> ATGCTTGGTGTTGCCGGAATACTCTTCACGGATCTACTTCGTACCACAGG
EV538088       --> ATGCTTGGTGTTGCCGGAATACTCTTCACGGACTTACTTCGTACCACAAG
EV538184       --> ATGCTTGGTGTTGCCGGAATACTCTTCACAGATCTACTTCGTACCACGGG
FD962753       --> ATGCTTGGTGTTGCCGGAATACTTTTCACGGACCTACTTCGTACCACAGG
FD947810       --> ATGCTTGGTGTTGCCGGAATACTCTTCACGGATCTACTTCGTACCACAGG

               1101   -   1151
UN23501        --> GATTAGCAACTTACCGGTTTGGTACGAAGCTGGAGCAACGAAATTTGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- ..................................................  Raphanus sativus var. oleiformis
EW729420       <-- GATTAGCAACTTACCGATTTGGTACGAAGCTGGAGCAACGAAATTTGATT  Raphanus sativus cv Early Scarlet Globe
FD574571       <-- GATTAGCAACTTACCGATTTGGTACGAAGCTGGAGCAACGAAATTTGATT  Raphanus sativus cv Early Scarlet Globe
EV542257       <-- GATTAGCAACTTACCGGTTTGGTACGAAGCTGGAGCAACGAAATTTGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544374       <-- GATTAGCAACTTACCGATTTGGTACGAAGCTGGAGCAACGAAATTTGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969174       <-- GATTAGCAACTTACCGGTTTGGTACGAAGCTGGAGCAACGAAATTTGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542179       <-- GATAAGCAACTTACCGGTTTGGTACGAAGCTGGAGCAACGAAATTTGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902149       <-- GATTAGCAACTTACCGGTTTGGTACGAAGCTGGAGCAACGAAATTTGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD565597       <-- GATTAGCAACTTACCGGTTTGGTACGATGCCGGAGCAACGAAATTTGATT  Raphanus sativus var. oleiformis
EV544493       <-- GATTAGCAACTTACCGATTTGGTAGGAAGCTGGAGCAACGAAATTTGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909275       <-- GATTAGCAACTTACCGATTTGGTACGAAGCTGGAGCAACGAAATTTGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539738       <-- GATTAGCAACTTACCGGTTTGGTACGAAGCTGGAGCAACGAAATTTGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966365       <-- GATTAGCAACTTACCGGTTTGGTACGAAGCTGGAGCGACGAAATTTGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952573       <-- ..........................AAGCTGGAGCAACGAAATTTGATT  Raphanus sativus cv Rat-Tail Radish #3870
EY912955       --> GATTAGCAACTTACCGATTTGGTACGAAGCTGGAGCAACGAAATTTGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD955047       --> GATTAGCAACTTACCGATTTGGTACGAAGCTGGAGCAACGAAATTTGATT  Raphanus sativus cv Rat-Tail Radish #3870
FD561432       --> GATTAGCAACTTACCGGTTTGGTACGATGCCGGAGCAACGAAATTTGATT  Raphanus sativus var. oleiformis
FD570600       --> GATTAGCAACTTACCGATTTGGTACGAAGCTGGAGCAACGAAATTTGATT  Raphanus sativus cv Early Scarlet Globe
FD973489       --> GATTAGCAACTTACCGGTTTGGTACGAAGCTGGAGCAACGAAATTTGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548149       --> GATTAGCAACTTACCGATTTGGTACGAAGCTGGAGCAACGAAATTTGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726805       --> GATTAGCAACTTACCGATTTGGTACGAAGCTGGAGCAACGAAATTTGATT  Raphanus sativus cv Early Scarlet Globe
FD544051       --> GATTAGCAACTTACCGGTTTGGTACGAAGCTGGAGCAACGAAATTTGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969863       --> GATTAGCAACTTACCGGTTTGGTACGAAGCTGGAGCGACGAAATTTGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548905       --> GATTAGCAACTTACCGATTTGGTACGAAGCTGGAGCAACGAAATTTGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY947882       --> GATTAGCAACTTACCGGTTTGGTACGAAGCTGGAGCAACGAAATTTGATT  Raphanus sativus cv Rat-Tail Radish #3870
EY905805       --> GATTAGCAACTTACCGGTTTGGTACGAAGCTGGAGCAACGAAATTTGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912977       --> GATTAGCAACTTACCGATTTGGTACGAAGCTGGAGCAACGAAATTTGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579806       --> GATTAGCAACTTACCGATTTGGTACGAAGCTGGAGCAACGAAATTTGATT  Raphanus sativus cv Rat-Tail Radish #3870
FD956762       --> GATTAGCAACTTACCGATTTGGTACGAAGCTGGAGCAACGAAATTTGATT  Raphanus sativus cv Rat-Tail Radish #3870
EY914230       --> GATTAGCAACTTACCGATTTGGTACGAAGCTGGAGCAACGAAATTTGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538088       --> GATAAGCAACTTACCGGTTTGGTACGAAGCTGGAGCAACGAAATTTGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538184       --> GATTAGCAACTTACCGGTTTGGTACGAAGCTGGAGCAACGAAATTTGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962753       --> GATAAGCAACTTACCGGTTTGGTACGAAGCTGGAGCAACGAAATTTGATT  Raphanus raphanistrum subsp. maritimus
FD947810       --> GATTAGCAACTTACCGATTTGGTACGAAGCTGGAGCAACGAAATTTGATT  Raphanus sativus cv Early Scarlet Globe

               1151   -   1201
UN23501        --> TTGCCAGCACAAAGACTCTCATTGTTGTACAGTTTCTACTCATGGGGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- ..................................................  Raphanus sativus var. oleiformis
EW729420       <-- TTGCCAGCACAAAAACTCTCATTGTTGTACAGTTTCTACTTATGGGGTTT  Raphanus sativus cv Early Scarlet Globe
FD574571       <-- TTGCCAGCACAAAAACTCTCATTGTTGTACAGTTTCTACTTATGGGGTTT  Raphanus sativus cv Early Scarlet Globe
EV542257       <-- TTGCCAGCACAAAGACTCTCATTGTTGTACAGTTTCTACTCATGGGGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544374       <-- TTGCCAGCACAAAAACTCTCATTGTTGTACAGTTTCTACTTATGGGGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969174       <-- TTGCCAGCACAAAGACTCTCATTGTTGTACAGTTTCTACTCATGGGGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542179       <-- TTGCCAGCACAAAGACTCTCATTGTTGTACAGTTTCTACTCATGGGGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902149       <-- TTGCCAGCACAAAGACTCTCATTGTTGTACAGTTTCTACTCATGGGGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD565597       <-- TTGCCAGCACAAAGACTCTCATTGTTGTACAGTTTCTACTCATGGGGTTT  Raphanus sativus var. oleiformis
EV544493       <-- TTGCCAGCACAAAGACTCTCATTGTTGTACAGTTTCTACTCATGGGGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909275       <-- TTGCCAGCACAAAAACTCTCATTGTTGTACAGTTTCTACTTATGGGGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539738       <-- TTGCCAGCACAAAGACTCTCATTGTTGTACAGTTTTTACTCATGGGGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966365       <-- TTGCCAGCACAAAGACTCTCATTGTTGTACAGTTTCTACTCATGGGGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952573       <-- TTGCCAGCACAAAAACTCTCATTGTTGTACAGTTTCTACTTATGGGGTTT  Raphanus sativus cv Rat-Tail Radish #3870
EY912955       --> TTGCCAGCACAAAAACTCTCATTGTTGTACAGTTTCTACTTATGGGGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD955047       --> TTGCCAGCACAAAAACTCTCATTGTTGTACAGTTTCTACTTATGGGGTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD561432       --> TTGCCAGCACAAAGACTCTCATTGTTGTACAGTTTCTACTCATGGGGTTT  Raphanus sativus var. oleiformis
FD570600       --> TTGCCAGCACAAAAACTCTCATTGTTGTACAGTTTCTACTTATGGGGTTT  Raphanus sativus cv Early Scarlet Globe
FD973489       --> TTGCCAGCACAAAGACTCTCATTGTTGTACAGTTTCTACTCATGGGGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548149       --> TTGCCAGCACAAAAACTCTCATTGTTGTACAGTTTCTACTTATGGGGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726805       --> TTGCCAGCACAAAAACTCTCATTGTTGTACAGTTTCTACTTATGGGGTTT  Raphanus sativus cv Early Scarlet Globe
FD544051       --> TTGCCAGCACAAAGACTCTCATTGTTGTACAGTTTCTACTCATGGGGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969863       --> TTGCCAGCACAAAGACTCTCATTGTTGTACAGTTTCTACTCATGGGGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548905       --> TTGCCAGCACAAAGACTCTCATTGTTGTACAGTTTCTACTCATGGGGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY947882       --> TTGCCAGTACAAAAACTCTCATTGTTGTTCAGTTTCTACTCATGGGGTTT  Raphanus sativus cv Rat-Tail Radish #3870
EY905805       --> TTGCCAGCACAAAGACTCTCATTGTTGTACAGTTTCTACTCATGGGGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912977       --> TTGCCAGCACAAAGACTCTCATTGTTGTACAGTTTCTACTCATGGGGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579806       --> TTGCCAGCACAAAAACTCTCATTGTTGTACAGTTTCTACTTATGGGGTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD956762       --> TTGCCAGCACAAAAACTCTCATTGTTGTACAGTTTCTACTTATGGGGTTT  Raphanus sativus cv Rat-Tail Radish #3870
EY914230       --> TTGCCAGCACAAAAACTCTCATTGTTGTACAGTTTCTACTTATGGGGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538088       --> TTGCCAGCACAAAGACTCTCATTGTTGTACAGTTTCTACTCATGGGGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538184       --> TTGCCAGCACAAAGACTCTCATTGTTGTACAGTTTCTACTCATGGGGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962753       --> TTGCCAGCACAAAGGCTCTCATTGTTGTACAGTTTCTACTCATGGGGTTT  Raphanus raphanistrum subsp. maritimus
FD947810       --> TTGCCAGCACAAAAACTCTCATTGTTGTACAGTTTCTACTTATGGGGTTT  Raphanus sativus cv Early Scarlet Globe

               1201   -   1251
UN23501        --> GCTGAGACCAAAAGGTATATGGACTTCGTCTCACCAGGATCTCAAGCCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- ..................................................
EW729420       <-- GCTGAGACCAAAAGGTATATGGACTTCGT-TCACCAGGATCTCAAGCCGC
FD574571       <-- GCTGAGACCAAAAGGTATATGGACTTCGTCTCACCAGGATCTCAAGCCGC
EV542257       <-- GCTGAGACCAAAAGGTATATGGACTTCGTCTCACCAGGATCTCAAGCCGC
FD544374       <-- GCTGAGACCAAAAGGTATATGGACTTCGTCTCACCAGGATCTCAAGCCGC
FD969174       <-- GCTGAGACCAAAAGGTATATGGACTTCGTCTCACCAGGATCTCAAGCCGC
EV542179       <-- GCTGAGACCAAAAGGTGTATGGACTTCGTCTCACCAGGATCTCAAGCCGC
EY902149       <-- GCTGAGACCAAAAGGTATATGGACTTCGTCTCACCAGGATCTCAAGCCGC
FD565597       <-- GCTGAGACCAAAAGGTATATGGACTTCGTCTCACCAGGATCTCAAGCCGC
EV544493       <-- GCTGAGACCAAAAGGTATATGGACTTCGTCTCACCAGGATCTCAAGCCGC
EY909275       <-- GCTGAGACAAAAAGGTATATGGACTTCGTCTCACCAGGATCTCAAGCCGC
FD539738       <-- GCTGAGACCAAAAGGTATATGGACTTCGTCTCACCAGGATCTCAAGCCGC
FD966365       <-- GCTGAGACCAAAAGGTATATGGACTTCGTCTCACCAGGATCTCAAGCCGC
FD952573       <-- GCTGAGACCAAAAGGTATATGTATTTCGTCTCACCAGGATCTCAAGCCGC
EY912955       --> GCTGAGACAAAAAGGTATATGGACTTCGTCTCACCAGGATCTCAAGCCG.
FD955047       --> GCTGAGACCAAAAGGTATATGGACTTCGTCTCACCAGGATCTCAAGCCGC
FD561432       --> GCTGAGACCAAAAGGTATATGGACTTCGTCTCACCAGGATCTCAAGCCGC
FD570600       --> GCTGAGACCAAAAGGTATATGGACTTCGTCTCACCAGGATCTCAAGCCGC
FD973489       --> GCTGAGACCAAAAGGTATATGGACTTCGTCTCACCAGGATCTCAAGCCGC
FD548149       --> GCTGAGACCAAAAGGTATATGGACTTCGTCTCACCAGGATCTCAAGCCGC
EW726805       --> GCTGAGACCAAAAGGTATATGGACTTCGT-TCACCAGGATCTCAAGCCGC
FD544051       --> GCTGAGACCAAAAGGTATATGGACTTCGTCTCACCAGGATCTCAAGCCGC
FD969863       --> GCTGA.............................................
EV548905       --> GCTGAGACCAAAAGGTATATGGACTTCGTCTCACCAGGATCTCAAGCCGC
EY947882       --> GCTGAGACAAAAAGGTATATGGACTTCGTCTCACCAGGATCTCAAGCCGC
EY905805       --> GCTGAGACCAAAAGGTATATGGACTTCGTCTCACCAGGATCTCAAGCCGC
EY912977       --> GCTGAGACCAAAAGGTATATGGACTTCGTCTCACCAGGATCTCAAGCCGC
FD579806       --> GCTGAGACCAAAAGGTATATGGACTT........................
FD956762       --> GCTGAGACCAAAAGGTATATGTACTTCGTCTCACCAGGATCTCAAGCCGC
EY914230       --> GCTGAGACCAAAAGGTATATGGACTTCGTCTCACCAGGATCTCAAGCCGC
EV538088       --> GCTGAGACCAAAAGGTGTATGGACTTCGTCTCACCAGGATCTCAAGCCGC
EV538184       --> GCTGAGACCAAAAGGTATATGGACTTCGTCTCACCAGGATCTCAAGCCGC
FD962753       --> GCTGAGACCAAAAGGTATATGGACTTCGTCTCACCAGGATCTCAAGCCGC
FD947810       --> GCTGAGACCAAAAGGTATATGGACTTCGTCTCACCAGGATCTCAAGCCGC

               1251   -   1301
UN23501        --> AGAAGGATCTTTCTTTGGACTTGAAGCAGCACTCGAAGGGCTCGAGCCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- ..................................................  Raphanus sativus var. oleiformis
EW729420       <-- AGAAGGATCTTTCTTTGGACTTGAAGAAGCTCTGGAAGGGCTTGAGCCCG  Raphanus sativus cv Early Scarlet Globe
FD574571       <-- AGAAGGATCTTTCTTTGGACTTGAAGAAGCTCTGGAAGGGCTCGAGCCCG  Raphanus sativus cv Early Scarlet Globe
EV542257       <-- AGAAGGATCTTTCTTTGGACTTGAAGCAGCACTCGAAGGGCTCGAGCCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544374       <-- AGAAGGATCTTTCTTTGGACTTGAAGAAGCTCTGGAAGGGCTCGAGCCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969174       <-- AGAAGGATCTTTCTTTGGACTTGAAGCAGCACTCGAAGGGCTCGAGCCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542179       <-- AGAAGGTTCTTTCTTTGGACTTGAAGAAGCACTCGAAGGGCTCGAGCCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902149       <-- AGAAGGATCTTTCTTTGGACTTGAAGCAGCACTCGAAGGGCTCGAGCCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD565597       <-- AGAAGGTTCTTTCTTTGGACTTGAAGCAGCACTCGAAGGGCTCGAGCCCG  Raphanus sativus var. oleiformis
EV544493       <-- AGAAGGTTCTTTCTTTGGACTTGAAGCAGCACTCGAAGGGCTCGAGCCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909275       <-- AGAAGGATCTTTCTTTGGACTTGAAGCAGCACTCGAAGGGCTCGAGCCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539738       <-- AGAAGGATCTTTCTTTGGACTTGAAGCAGCACTCGAAGGGCTCGAGCCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966365       <-- AGAAGGATCTTTCTTTGGACTTGAAGCAGCACTCGAAGGGCTCGAGCCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952573       <-- AGAAGGATCTTTCTTTGGACTTGAAGAAGCTCTGGAAGGGCTCGAGCCCG  Raphanus sativus cv Rat-Tail Radish #3870
EY912955       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD955047       --> AGAAAGATCTTTCTTTGGACTTGAAGAAGCtctgg...............  Raphanus sativus cv Rat-Tail Radish #3870
FD561432       --> AGAAGGTTCTTTCTTTGGACTTGAAGCAGCACTCGAAGGGCTCGAGCCCG  Raphanus sativus var. oleiformis
FD570600       --> AGAAGGATCTTTCTTTGGACTTGAAGAAGCTCTGGAAGGGCTCGAGCCCG  Raphanus sativus cv Early Scarlet Globe
FD973489       --> AGAAGGATCTTTCTTTGGACTTGAAGCAGCAC..................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548149       --> AGAAGGATCTTTCTTTGGACTTGAAGAAGCTCTGGAAGGGCTCGAGCCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726805       --> AGAAGGATCTTTCTTTGGACTTGAAGAAGCTCTGGAAGGGCTTGAGCCCG  Raphanus sativus cv Early Scarlet Globe
FD544051       --> AGAAGGATCTTTCTTTGGACTTGAAGCAGCACTCGAAGGGCTCGAGCCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969863       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548905       --> AGAAGGTTCTTTCTTTGGACTTGAAGCAGCACTCGAAGGGCTCGAGCCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY947882       --> CGAAGGATCTTTCTTTGGACTTGAAGCAGCACTCGAAGGGCTCGAGCCCG  Raphanus sativus cv Rat-Tail Radish #3870
EY905805       --> AGAAGGATCTTTCTTTGGACTTGAAGCAGCACTCGAAGGGCTCGAGCCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912977       --> AGAAGGTTCTTTCTTTGGACTTGAAGCAGCACTCGAAGGGCTCGAGCCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579806       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD956762       --> AGAAGGATCTTTCTTTGGACTTGAAGAAGCTCTGGAAGGGCTCGAGCCCG  Raphanus sativus cv Rat-Tail Radish #3870
EY914230       --> AGAAGGATCTTTCTTTGGACTTGATGAAGCTCTGGAAGGGCTCGAGCCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538088       --> AGAAGGTTCTTTCTTTGGACTTGAAGAAGCACTCGAAGGGCTCGAGCCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538184       --> AGAAGGATCTTTCTTTGGACTTGAAGCAGCACTCGAAGGGCTCGAGCCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962753       --> AGAAGGTTCTTTCTTTGGACTTGAAGCAGCACTCGAAGGGCTCGAGCCCG  Raphanus raphanistrum subsp. maritimus
FD947810       --> AGAAGGATCTTTCTTTGGACTTGAAGAAGCTCTGGAAGGGCTCGAGCCCG  Raphanus sativus cv Early Scarlet Globe

               1301   -   1351
UN23501        --> GATATCCTGGAGGGCCGCTCTTGAATCCACTAGGACTTGCTAAGGATATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- ..................................................  Raphanus sativus var. oleiformis
EW729420       <-- GATATCCTGGAGGGCCGCTCTTGAATCCACTAGGACTTGCTAAGGATATC  Raphanus sativus cv Early Scarlet Globe
FD574571       <-- GATATCCTGGAGGACCGCTCTTGAATCCACTAGGACTTGCTAAGGATATC  Raphanus sativus cv Early Scarlet Globe
EV542257       <-- GATATCCTGGAGGGCCGCTCTTGAATCCACTAGGACTTGCTAAGGATATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544374       <-- GATATCCTGGAGGGCCGCTCTTGAATCCACTAGGACTTGCTAAGGATATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969174       <-- GATATCCTGGAGGGCCGCTCTTGAATCCACTAGGACTTGCTAAGGATATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542179       <-- GATATCCTGGAGGACCGCTCTTGAATCCACTAGGACTTGCTAAGGATATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902149       <-- GATATCCTGGAGGGCCGCTCTTGAATCCACTAGGACTTGCTAAGGATATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD565597       <-- GATATCCTGGAGGGCCGCTCCTGAATCCACTAGGATTTGCGAAGGATATC  Raphanus sativus var. oleiformis
EV544493       <-- GATATCCTGGAGGACCGCTCTTGAATCCACTAGGACTTGCGAAGGATATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909275       <-- GATATCCTGGAGGGCCGCTCTTGAATCCACTAGGACTTGCTAAGGATATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539738       <-- GATATCCTGGAGGGCCGCTCTTGAATCCACTAGGACTTGCTAAGGATATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966365       <-- GATATCCTGGAGGGCCGCTCTTGAATCCACTAGGACTTGCTAAGGATATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952573       <-- GATATCCTGGAGGACCGCTCTTGAATCCACTAGGACTTGCTAAGGATATC  Raphanus sativus cv Rat-Tail Radish #3870
EY912955       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD955047       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD561432       --> GATATCCTGGAGGGCCGCTCCTGAATCCACTAGGATTTGCGAAGGATATC  Raphanus sativus var. oleiformis
FD570600       --> GATATCCTGGAGGACCGCTCTTGAATCCACTAGGACTTGCTAAGGATATC  Raphanus sativus cv Early Scarlet Globe
FD973489       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548149       --> GATATCCTGGAGGGCCGCTCTTGAATCCACTAGGACTTGCTAAGGATATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726805       --> GATATCCTGGAGGGCCGCTCTTGAATCCACTAGGACTTGCTAAGGATATC  Raphanus sativus cv Early Scarlet Globe
FD544051       --> GATATCCTGGAGGGCCGCTCTTGAATCCACTAGGACTTGCTAAGGATATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969863       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548905       --> GATATCCTGGAGGACCGCTCTTGAATCCACTAGGACTTGCGAAGGATATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY947882       --> GATATCCTGGAGGGCCGCTCTTGAATCCACTAGGACTT............  Raphanus sativus cv Rat-Tail Radish #3870
EY905805       --> GATATCCTGGAGGGCCGCTCTTGAATCCACT...................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912977       --> GATATCCTGGAGGACCGCTCTTGAATCCACTAGGACTTGCGAAGGATATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579806       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD956762       --> GATATCCTGGAGGACCGCTCTTGAATCCACT...................  Raphanus sativus cv Rat-Tail Radish #3870
EY914230       --> GATATCCTGGAGGGCCGCTCTTGAATCCA.....................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538088       --> GATATCCTGGAGGACCGCTCTTGAATCCACTAGGACTTGCTAAGGATATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538184       --> GATATCCTGGAGGGCCGCTCTTGAATCCACTAGGACTTGCTAAGGATATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962753       --> GATATCCTGGAGGACCGCTCTTGAATCCACTA..................  Raphanus raphanistrum subsp. maritimus
FD947810       --> GATATCCTGGAGGACCGCTCTTGAATCCACTAGGACTTGCTAAGGATATC  Raphanus sativus cv Early Scarlet Globe

               1351   -   1401
UN23501        --> AAGAACGCTAATGACTGGAAGCTTAAGGAGATCAAGAATGGTCGTCTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- ..................................................
EW729420       <-- AAGAACGCTAATGACTGGAAGCTTAAGGAGATCAAGAATGGTCGTCTAGC
FD574571       <-- AAGAACGCTAATGACTGGAAGCTTAAGGAGATCAAGAATGGTCGTCTAGC
EV542257       <-- AAGAACTCTAATGACTGGAAGCTTAAGGAGATCAAGAATGGTCGTCTAGC
FD544374       <-- AAGAACGCTAATGACTGGAAGCTTAAGGAGATCAAGAATGGTCGTCTAGC
FD969174       <-- AAGAACGCTAATGACTGGAAGCTTAAGGAGATCAAGAATGGTCGTCTAGC
EV542179       <-- AAGAACGCTAATGACTGGAAGCTTAAGGAGATCAAGAATGGTCGTCTAGC
EY902149       <-- AAGAACGCTAATGACTGGAAGCTTAAGGAGATCAAGAATGGTCGTCTAGC
FD565597       <-- AAGAACGCTAATGACTGGAAGCTTAAGGAGATCAAGAATGGTCGTCTAGC
EV544493       <-- AAGAACGCAAATGACTGGAAGCTTAAGGAGATCAAGAATGGTCGTCTAGC
EY909275       <-- AAGAACGCTAATGACTGGAAGCTTAAGGAGATCAAGAATGGTCGTCTAGC
FD539738       <-- AAGAACGCTAATGACTGGAAGCTTAAGGAGATCGAGAATGGTCGTCTAGC
FD966365       <-- AAGAACGCTAATGACTGGAAGCTTAAGGAGATCAAGAATGGTCGTCTAGC
FD952573       <-- AAGAACGCTAATGACTGGAAGCTTAAGGAGATCAAGAATGGTCGTCTAGC
EY912955       --> ..................................................
FD955047       --> ..................................................
FD561432       --> AAGAACGCTAATGACTGGAAGCTTAAG-AGATCAAGAATGGTCGTCTAGC
FD570600       --> AAGAACGCTAATGACTGGAAGCTTAAG-AGATCAAGAATGGTCGTCTAGC
FD973489       --> ..................................................
FD548149       --> AAGAACGCTAATGACTGGAAGCTTAAG-AGATCAAGAATGGTCGTCTAGC
EW726805       --> AAGAACGCTAATGACTGGAAGCTTAAG-AGATCAAGAATGGTCGTCTAGC
FD544051       --> AAGAACGCTAATGACTGGAAGCTTAAG-AGATCGAGAATGGTCGTCTAGC
FD969863       --> ..................................................
EV548905       --> AAGAACGCAAATGACTGGAAGCTTAAG-AGATCAAGAATGGTCGTCTAGC
EY947882       --> ..................................................
EY905805       --> ..................................................
EY912977       --> AAGAACGCAAATGACTGGAAGCTTAAGGAGATCAAGAATGGTCGTCTAGC
FD579806       --> ..................................................
FD956762       --> ..................................................
EY914230       --> ..................................................
EV538088       --> AAGAACGCTAATGACTGGAAGCTTAAGGAGATCAAGAATGGTCGTCTAGC
EV538184       --> AAGAACTCTAATGACTGGAAGCTTAAGGAGATCAAGAATGGTCGTCTAGC
FD962753       --> ..................................................
FD947810       --> AAGAACGCTAATGACTGGAAGCTTAAAGAGATCAAGAATGGTCGTCTAGC

               1401   -   1451
UN23501        --> AATGATGGCGATGCTAGGGTTCTTTGTTCAAGCCTCTGTGACTCACACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- ..................................................  Raphanus sativus var. oleiformis
EW729420       <-- AATGATGGCGATGCTAGGGTTCTTCGTCCAAGCCTCTGTGACTCACACTG  Raphanus sativus cv Early Scarlet Globe
FD574571       <-- AATGATGGCGATGCTAGGGTTCTTCGTCCAAGCCTCTGTGACTCACACTG  Raphanus sativus cv Early Scarlet Globe
EV542257       <-- AATGATGGCGATGCTAGGGTTCTTTGTTCAAGCCTCTGTGACTCACACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544374       <-- AATGATGGCGATGCTAGGGTTCTTCGTCCAAGCCTCTGTGACTCACACTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD969174       <-- AATGATGGCGATGCTAGGGTTCTTTGTTCAAGCCTCTGTGACTCACACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542179       <-- AATGATGGCGATGCTAGGGTTCTTTGTTCAAGCCTCTGTGACTCACACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902149       <-- AATGATGGCGATGCTAGGGTTCTTTGTTCAAGCCTCTGTGACTCACACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD565597       <-- AATGATGGCGATGCTAGGGTTCTTCGTCCAAGCCTCTGTCACTCACACTG  Raphanus sativus var. oleiformis
EV544493       <-- AATGATGGCGATGTTAGGGTTCTTTGTTCAAGCCTTTGCGACTCACACTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909275       <-- AATGATGGCGATGCTAGGGTTCTTTGTTCAAGCCTCTGTGACTCACACTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539738       <-- AATGATGGCGATGCTAGGGTTCTTTGTTCAAGCCTCTGTGACTCACACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966365       <-- AATGATGGCGATGCTAGGGTTCTTTGTTCAAGCCTCTGTGACTCACACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952573       <-- AATGATGGCGATGCTAGGGTTCTTCGTCCAAGCCTTTGTGACTCACACTG  Raphanus sativus cv Rat-Tail Radish #3870
EY912955       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD955047       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD561432       --> AATGATGGCGATGCTAGGGTTCTTCGTCCAAGCCTCTGTCACTCACACTG  Raphanus sativus var. oleiformis
FD570600       --> A-TGATGGCGATGCTAGGGTTCTTCG-TCAAGCCTCTGTGACTCACACTG  Raphanus sativus cv Early Scarlet Globe
FD973489       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548149       --> AATGATGGCGATGCTAGGGTTCTTCGTCCAAGCCTCTGTGACTCACACTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726805       --> A-TGATGGCGATG.....................................  Raphanus sativus cv Early Scarlet Globe
FD544051       --> AATGATGGCGATGCTAGGGTTCTTTGTTCAAGCCTCTGTGACTCACACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969863       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548905       --> AATGATGGCGATG.....................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY947882       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY905805       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912977       --> A-TGATGGCGATG.....................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD579806       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD956762       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY914230       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538088       --> AATGATGGCGATGCTAGGGTTCTTTGTTCAAGCCTCTGTGACTCACACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538184       --> AATGATGGCGATGCTAGGGTTCTTTGTTCAAGCCTCTGTGACTCACACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962753       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD947810       --> AATGATGGCGATGCTAGGGTTCTTCGTCCAAGCCTCTGTGACTCACACTG  Raphanus sativus cv Early Scarlet Globe

               1451   -   1501
UN23501        --> GTCCTATCGATAACCTTGTCGAGCATCT-CTCTAATCCGTGGCATAAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- ..................................................
EW729420       <-- GTCCTATCGATAACCTTGTCGAGCATCT-CTCTAATCCGTGGCATAAGAC
FD574571       <-- GTCCTATCGATAACCTTGTCGAGCATCT-CTTTAATCCGTGGCATAAGAC
EV542257       <-- GTCCTATCGATAACCTTGTCGAGCATCT-CTCTAATCCGTGGCATAAGAC
FD544374       <-- GTCCTATCGATAACCTTGTCGAGCATCT-CTCTACTCCGTGGCATAAGAC
FD969174       <-- GTCCTATCGATAACCTTGTCGAGCATCT-CTCTAATCCGTGGCATAAGAC
EV542179       <-- GTCCTATCGATAACCTTGTCGAGCATCT-CTCTAATCCGTGGCATAAGAC
EY902149       <-- GTCCTATCGATAACCTTGTCGAGCATCT-CTCTAATCCGTGGCATAAGAC
FD565597       <-- GTCCTATCGATAACCTTGTCGAGCATCT-CTCTAATCCGTGGCATAAGAC
EV544493       <-- GTCCTATCGATAACCTTGTCGAGCATCT-CTTTAATCCGTGGCATAAGAC
EY909275       <-- GTCCTATCGATAACCTTGTCGAGCATCT-CTCTAATCCGTGGCATAAGAC
FD539738       <-- GTCCTATCGATAACCTTGTCGAGCATCT-CTTTAATCCGTGGCATAAGAC
FD966365       <-- GTCCTATCGATAACCTTGTCGAGCATCT-CTCTAATCCGTGGCATAAGAC
FD952573       <-- GTCCTATCGATAACCTTGTCGAGCATCT-CTTTAATCCGTGGCATAAGAC
EY912955       --> ..................................................
FD955047       --> ..................................................
FD561432       --> GTCCTATCGATAACCTTGTCGAGCATCTTTTCTAATCCGTGGCATAAG..
FD570600       --> GTC-TATCGATAACCTTGTCGAGCATCT-CTCTAATCgtg..........
FD973489       --> ..................................................
FD548149       --> GTCCTATCGATAACCTTGTCGAGCATCT-CTCTACTCCGTGGCATA-GA-
EW726805       --> ..................................................
FD544051       --> GTCCTATCGATAACCTTGTCGAGC..........................
FD969863       --> ..................................................
EV548905       --> ..................................................
EY947882       --> ..................................................
EY905805       --> ..................................................
EY912977       --> ..................................................
FD579806       --> ..................................................
FD956762       --> ..................................................
EY914230       --> ..................................................
EV538088       --> GTCCTATCGATAACCTTGTCGAGCATCT-CTCTAATCCGTGGCATAAGAC
EV538184       --> GTCCTATCGATAACCTTGTCGAGCATCT-CTCTAATCCGTGGCATAAGAC
FD962753       --> ..................................................
FD947810       --> GTCCTATCGATAACCTTGTCGAGCATCT-CTCTAATCCGTGGCATAAGAC

               1501   -   1551
UN23501        --> CATCATTCAAACCCTCTTCACCTCTGCTTCTTAGTTACA-TTTCATGTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- ..................................................
EW729420       <-- CATCATTCAAACCCTCTTCACCTCTGCTTCTTAGTTACA-TTTCATGTAG
FD574571       <-- CATCATTCAAACCCTCTTCACCTCTGCTTCTTAGTTACAATTTCATGTAG
EV542257       <-- CATCATTCAAACCCTCTTCACCTCTGCTTCTTAGTTACA-TTTCATGTAG
FD544374       <-- CATCATTCAAACCCTCTTCACCTCTGCTTCTTAGTTACA-TTTCATGTAG
FD969174       <-- CATCATTCAAACCCTCTTCACCTCTGCTTCTTAGTTACA-TTTCATGTAG
EV542179       <-- CATCATTCAAACCCTCTTCACCTCTGCTTCTTAGTTACA-TTTCATGTAG
EY902149       <-- CATCATTCAAACCCTCTTCACCTCTGCTTCTTAGTTACA-TTTCATGTAG
FD565597       <-- CATCATTCAAACCCTCTTCACCTCTACTTCTTAGTTACA-TTTCATGTAG
EV544493       <-- CATCATTCAAACCCTCTTCACCTCTGCTTTTTAGTTACA-TTTCATGTAG
EY909275       <-- CATCATCCAAACCCTCTTCACCTCTGCTTCTTAGTTACA-TTTCATGTAG
FD539738       <-- CATCATTCAGACCCTCTTCACCTCTGCTTTTTAGTTACA-TTTCATGTAG
FD966365       <-- CATCATTCAAACCCTCTTCACCTCTGCTTCTTAGTTACA-TTTCATGTAG
FD952573       <-- CATCATTCAAACCCTCTTCACCTCTGCTTCTTAGTTACAATTTCATGTAG
EY912955       --> ..................................................
FD955047       --> ..................................................
FD561432       --> ..................................................
FD570600       --> ..................................................
FD973489       --> ..................................................
FD548149       --> CATCATTCAAACCCTCTTCACCTCTGCTcta...................
EW726805       --> ..................................................
FD544051       --> ..................................................
FD969863       --> ..................................................
EV548905       --> ..................................................
EY947882       --> ..................................................
EY905805       --> ..................................................
EY912977       --> ..................................................
FD579806       --> ..................................................
FD956762       --> ..................................................
EY914230       --> ..................................................
EV538088       --> CATCATTCAAACCCTCTTCACCTCTGCTTCTTAGTTACA-TTTCATGT..
EV538184       --> CATCATTCAAACCCTCTTCACCTCTGCTTCTTAGTTACA-TTTCATGTAG
FD962753       --> ..................................................
FD947810       --> CATCATTCAAACCCTCTTCAC-TCTGCTTCTTAGTTACAATTTCATGTAG

               1551   -   1601
UN23501        --> CAAATTCAATATACTGCTGGAGAAGTGTATCAATTACCTTTAAAAAGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- ..................................................
EW729420       <-- CAAATTCAATATACTGCTGGAGAAGTGTATCAATTACCTTT.........
FD574571       <-- CAAATTCAATATACTGCTGGAGAAGTGTATCAATTACCTTTAAAAAGTAC
EV542257       <-- CAAATTCAATATACTGCTGGAGAAGTGTATCAATTACCTTTAAAAAGTAC
FD544374       <-- CAAATTCAATATACTGCTGGAGAAGTGTATCAATTACCTTTAAAAAGTAC
FD969174       <-- CAAATTCAATATACTGCT................................
EV542179       <-- CAAATTCAATATACTGCTGGAGAAGTGTATCAATTACCTTTAAAAAGTAC
EY902149       <-- CAAATTCAATATACTGCTGGAGAAGTGTATCAATTACCTTTAAAAAGTAC
FD565597       <-- CAAGTTCAATATACTGCTGGAGAAGTGCATCAATTACCTTTAAAAAGTAC
EV544493       <-- CAAATTCAATATACTGCCGGAGAAGTGTATCAATTACCTTTAAAAAGTAC
EY909275       <-- CAAATTCAATATA-TGCTGGAGAAGTGCATCAATTACCTTTAAAAAGTAC
FD539738       <-- CAAATTCAATATACTGCTGGAGAAGTGTATCAATTACCTTTAAAAAGTAC
FD966365       <-- CAAATTCAATATACTGCTGGAGAAGTGTATCAATTACCTTTAAAAAGTAC
FD952573       <-- CAAATTCAATATACTGCTGGAGAAGTGTATCAATTACCTTTAAAAAGTAC
EY912955       --> ..................................................
FD955047       --> ..................................................
FD561432       --> ..................................................
FD570600       --> ..................................................
FD973489       --> ..................................................
FD548149       --> ..................................................
EW726805       --> ..................................................
FD544051       --> ..................................................
FD969863       --> ..................................................
EV548905       --> ..................................................
EY947882       --> ..................................................
EY905805       --> ..................................................
EY912977       --> ..................................................
FD579806       --> ..................................................
FD956762       --> ..................................................
EY914230       --> ..................................................
EV538088       --> ..................................................
EV538184       --> CAAATTCAATA.......................................
FD962753       --> ..................................................
FD947810       --> CAAATTCA-TATACTGCTGGAGA-GTGTATCA--TACCTTTAAAA-GTAC

               1601   -   1651
UN23501        --> AACAAATCTAACCACTCTTTTTAACATTAATCATAACAAAATAAAAATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891820       <-- ..................................................
EW729420       <-- ..................................................
FD574571       <-- AACAAATCTAACCACTCTTTTTAACATT......................
EV542257       <-- AACAAATCTAACCACTCTTTTTAACATTAATCATAACAAAATAAAAATCC
FD544374       <-- AACAAATCTAACCACTCTTTTTAACATTAATCAT................
FD969174       <-- ..................................................
EV542179       <-- AACAAATCTAACCACTCTTTTTAAC.........................
EY902149       <-- AACAAATCTAACCACTCTTTTT............................
FD565597       <-- AACAAATCTAACCACTCTTTTT............................
EV544493       <-- AACAAATCTAACCACTCTTTTTAAC.........................
EY909275       <-- AACAAATCTAACCACTCTTTTTAACATT......................
FD539738       <-- AACAAATCTAACCACTCTTTTTAACATTAATCAT................
FD966365       <-- AACAAATCTAACCACTCTTTT.............................
FD952573       <-- AACAAATC..........................................
EY912955       --> ..................................................
FD955047       --> ..................................................
FD561432       --> ..................................................
FD570600       --> ..................................................
FD973489       --> ..................................................
FD548149       --> ..................................................
EW726805       --> ..................................................
FD544051       --> ..................................................
FD969863       --> ..................................................
EV548905       --> ..................................................
EY947882       --> ..................................................
EY905805       --> ..................................................
EY912977       --> ..................................................
FD579806       --> ..................................................
FD956762       --> ..................................................
EY914230       --> ..................................................
EV538088       --> ..................................................
EV538184       --> ..................................................
FD962753       --> ..................................................
FD947810       --> Ac................................................

               1651   -   1701
UN23501        --> AATACTGGAGTCTGGTTC
                   ~~~~~~~~~~~~~~~~~~
EX891820       <-- ..................
EW729420       <-- ..................
FD574571       <-- ..................
EV542257       <-- AATACTGGAGTCTGGTTC
FD544374       <-- ..................
FD969174       <-- ..................
EV542179       <-- ..................
EY902149       <-- ..................
FD565597       <-- ..................
EV544493       <-- ..................
EY909275       <-- ..................
FD539738       <-- ..................
FD966365       <-- ..................
FD952573       <-- ..................
EY912955       --> ..................
FD955047       --> ..................
FD561432       --> ..................
FD570600       --> ..................
FD973489       --> ..................
FD548149       --> ..................
EW726805       --> ..................
FD544051       --> ..................
FD969863       --> ..................
EV548905       --> ..................
EY947882       --> ..................
EY905805       --> ..................
EY912977       --> ..................
FD579806       --> ..................
FD956762       --> ..................
EY914230       --> ..................
EV538088       --> ..................
EV538184       --> ..................
FD962753       --> ..................
FD947810       --> ..................