RadishBase

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Alignment for radish unigene UN23510

               1      -     51
UN23510        --> AGAGAGGATCAAGATCATAACTTCAGATTCAATTTTCTTTCTACCTCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570143       <-- ..................................................
FD556364       <-- ..................................................
EV543905       --> AGAGAGGATCAAGATCATAACTTCAGATTCAATTTTCTTTCTACCTCAAA
EX776503       --> ................ATAACTTCAGATTCAATTTTCTTTCTACCTCAAA
EV531632       --> ........................................CTACCTCAAA
EV571244       --> ..................................................
EV572251       --> ..................................................
EV574508       --> ..................................................
FD530118       --> ..................................................
FD942722       --> ..................................................
FD960700       --> ..................................................
FD960917       --> ..................................................
EV573903       --> ..................................................
FY430128       --> ..................................................
FY438570       --> ..................................................
FY444241       --> ..................................................

               51     -    101
UN23510        --> TAGAGTAAAACAGAATCATTTAAAAAAAAATTCTCTAGCCTTTTATTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570143       <-- ..................................................
FD556364       <-- ..................................................
EV543905       --> TAGAGTAAAACAGAATCATTTAAAAAAAAATTCTCTAGCCTTTTATTATT
EX776503       --> TAGAGTAAAACAGAATCATTTAAAAAAAAATTCTCTAGCCTTTTATTATT
EV531632       --> TAGAGTAAAACAGAATCATTTAAAAAAAAATTCTCTAGCCTTTTATTATT
EV571244       --> ....................aAAAAAAAAATTCTCTAGCCTTTTATTATT
EV572251       --> .....................AAAAAAAAATTCTCTAGCCTTTTATTATT
EV574508       --> .....................AAAAAAAAATTCTCTAGCCTTTTATTATT
FD530118       --> .....................AAAAAAAAATTCTCTAGCCTTTTATTATT
FD942722       --> .....................AAAAAAAAGTTCTCTAGCCTTTTATTATT
FD960700       --> .....................AAAAAAAAATTCTCTAGCCTTTTATTATT
FD960917       --> .....................AAAAAAAAATTCTCTAGCCTTTTATTATT
EV573903       --> ......................AAAAAAAATTCTCTAGCCTTTTATTATT
FY430128       --> ......................AAAAAAATTTCTCTTGCCTTTTATTATT
FY438570       --> ........................AAAAATTTCTCTTGCCTTTTATTATT
FY444241       --> ...........................aatTTCTCTTGCCTTT-ATTATT

               101    -    151
UN23510        --> ATGTACACTGTTTCCTGAACCATAACAGATTCAAGTTCTTTCACTGTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570143       <-- ..................................................
FD556364       <-- ..................................................
EV543905       --> ATGTACACTGTTTCCTGAACCATAACAGATTCAAGTTCTTTCACTGTTTT
EX776503       --> ATGTACACTGTTTCCTGAACCATAACAGATTCAAGTTCTTTCACTATTTT
EV531632       --> ATGTACACTGTTTCCTGAACCATAACAGATTCAAGTTCTTTCACTGTTTT
EV571244       --> ATGTACACTGTTTCCTGAACCATAACAGATTCAAGTTCTTTCACTGTTTT
EV572251       --> ATGTACACTGTTTCCTGAACCATAACAGATTCAAGTTCTTTCACTGTTTT
EV574508       --> ATGTACACTGTTTCCTGAACCATAACAGATTCAAGTTCTTTCACTGTTTT
FD530118       --> ATGTACACTGTTTCCTGAACCATAACAGATTCAAGTTCTTTCACTGTTTT
FD942722       --> ATGTACACTGTTTCCTGAACCATAACAGATTCAAGTTCTTTCACTGTTTT
FD960700       --> ATGTAAACTGTTTCCTGAAACATAACAGATTCAAGTTCTTTCACTGTTTT
FD960917       --> ATGTAAACTGTTTCCTGAAACATAACAGATTCAAGTTCTTTCACTGTTTT
EV573903       --> ATGTACACTGTTTCCTGAACCATAACAGATTCAAGTTCTTTCACTGTTTT
FY430128       --> ATGTACACCGTTTCCTGAATCATAACAGATTCAATTTCTTTCACTGTTTT
FY438570       --> ATGTACACTGTTTCCTGAATCATAACAGATTCAATTTCTTTCACTGTTTT
FY444241       --> ATGTACACTGTTTCCTGAATCATAACAGATTCAATTTCTTTCACTGTTTT

               151    -    201
UN23510        --> CTCTCAAGAACCCTTATACATGCAAACCATCTGTAGGGAGAGAAGTAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570143       <-- ..................................................
FD556364       <-- ..................................................
EV543905       --> CTCTCAAGAACCCTTATACATGCAAACCATCTGTAGGGAGAGAAGTAAGA
EX776503       --> CTCTCAAGAACCCTTATACATGCAAACCATCTGTAGGGAGAGAAGTAAGA
EV531632       --> CTCTCAAGAACCCTTATACATGCAAACCATCTGTAGGGAGAGAAGTAAGA
EV571244       --> CTCTCAAAAACCCTTATACATGCAAACCATCTGTAGGGAGAGAAGTAAGA
EV572251       --> CTCTCAAGAACCCTTATACATGCAAACCATCTGTAGGGAGAGAAGTAAGA
EV574508       --> CTCTCAAGAACCCTTATACATGCAAACCATCTGTAGGGAGAGAAGTAAGA
FD530118       --> CTCTCAAGAACCCTTATACATGCAAACCATCTGTAGGGAGAGAAGTAAGA
FD942722       --> CTCTCAAGAACCCTTATACATGCAAACCATCTGTAGGGAGAGAAGTAAGA
FD960700       --> CTCTCAAGAACCCTTATACATGCAAACCATCTGTAGGGAGAGAAGTAAGA
FD960917       --> CTCTCAAGAACCCTTATACATGCAAACCATCTGTAGGGAGAGAAGTAAGA
EV573903       --> CTCTCAAGAACCCTTATACATGCAAACCATCTGTAGGGAGAGAAGTAAGA
FY430128       --> CTCTCAA-------TATACATGCAAACCATCTGTAAGGAGAGAAGTAAGA
FY438570       --> CTCTCAA-------TATACATGCAAACCATCTGTAAGGAGAGAAGTAAGA
FY444241       --> CTCTCAA-------TATACATGCAAACCATCTGTAAGGAGAGAAGTAAGA

               201    -    251
UN23510        --> TCAGTTTTGGTTCTGAGACAGACACACAAGTCTACTCAGCAAAAGAGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570143       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD556364       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV543905       --> TCAGTTTTGGTTCTGAGACAGACGCACAAGTCTACTCAGCAAAAGAGTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776503       --> TCAGTTTTGGTTCTGAAACAGACACACAAGTCTACTCAGCAAAAGAGTGT  Raphanus raphanistrum subsp. landra
EV531632       --> TCAGTTTTGGTTCTGAGACAGACACACAAGTCTACTCAGCAAAAGAGTGC  Raphanus raphanistrum subsp. maritimus
EV571244       --> TCAGTTTTGGTTCTGAGACAGACACACAAGTCTACTCAGCAAAAGAGTGC  Raphanus raphanistrum subsp. landra
EV572251       --> TCAGTTTTGGTTCTGAGACAGACACACAAGTCTACTCAGCAAAAGAGTGT  Raphanus raphanistrum subsp. landra
EV574508       --> TCAGTTTTGGTTCTGAGACAGACACACAAGTCTACTCAGCAAAAGAGTGT  Raphanus raphanistrum subsp. landra
FD530118       --> TCAGTTTTGGTTCTGAGACAGACACACAAGTCTACTCAGCAAAAGAGTGC  Raphanus raphanistrum subsp. maritimus
FD942722       --> TCAGTTTTGGTTCTGAGACAGACACACAAGTCTACTCAGCAAAAGAGTGC  Raphanus sativus cv Early Scarlet Globe
FD960700       --> TCAGTTTTGGTTCTGAGACAGACACACAAGTCTACTCAGCAAAAGAGTGC  Raphanus raphanistrum subsp. maritimus
FD960917       --> TCAGTTTTGGTTCTGAGACAGACACACAAGTCTACTCAGCAAAAGAGTGC  Raphanus raphanistrum subsp. maritimus
EV573903       --> TCAGTTTTGGTTCTGAGACAGACACACAAGTCTACTCAGCAAAAGAGTGT  Raphanus raphanistrum subsp. landra
FY430128       --> TCAGTTTTGGTTCTGAGACAGACACACAAGTCTACTCAGCAAAAGAGTGT  Raphanus sativus cv GSK3-1
FY438570       --> TCAGTTTTGGTTCTGAGACAGACACACAAGTCTACTCAGCAAAAGAGTGT  Raphanus sativus cv GSK3-1
FY444241       --> TCAGTTTTGGTTCTGAGACAGACACACAAGTCTACTCAGCAAAAGAGTGT  Raphanus sativus cv GSK3-1

               251    -    301
UN23510        --> TCATTCAATTGCTCCGTTGGAAGCGGATCAACTTTCTCAGCCTTGCCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570143       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD556364       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV543905       --> TCATTCAATTGCTCCGTTGGAAGCGGATCAACTTTCTCAGCCTTGCCATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776503       --> TCATTCAATTGCTCAGTTGGAGGCGGATCAACTTTCTCAGCCTTGCCATC  Raphanus raphanistrum subsp. landra
EV531632       --> TCATTCAATTGCTCCGTTGGAAGCGGATCAACTTTCTCAGCCTTGCCATC  Raphanus raphanistrum subsp. maritimus
EV571244       --> TCATTCAATTGCTCCGTTGGAAGCGGATCAACTTTCTCAGCCTTGCCATC  Raphanus raphanistrum subsp. landra
EV572251       --> TCATTCAATTGCTCAGTTGGAAGCGGATCAACTTTCTCAGCCTTGCCATC  Raphanus raphanistrum subsp. landra
EV574508       --> TCATTCAATTGCTCAGTTGGAGGCGGATCAACTTTCTCAGCCTTGCCATC  Raphanus raphanistrum subsp. landra
FD530118       --> TCATTCAATTGCTCCGTTGGAAGCGGATCAACTTTCTCAGCCTTGCCATC  Raphanus raphanistrum subsp. maritimus
FD942722       --> TCATTCAATTGCTCCGTTGGAAGCGGATCAACTTTCTCAGCCTTGCCATC  Raphanus sativus cv Early Scarlet Globe
FD960700       --> TCATTCAATTGCTCCGTTGGAAGCGGATCAACTTTCTCAGCCTTGCCATC  Raphanus raphanistrum subsp. maritimus
FD960917       --> TCATTCAATTGCTCCGTTGGAAGCGGATCAACTTTCTCAGCCTTGCCATC  Raphanus raphanistrum subsp. maritimus
EV573903       --> TCATTCAATTGCTCAGTTGGAGGCGGATCAACTTTCTCAGCCTTGCCATC  Raphanus raphanistrum subsp. landra
FY430128       --> TCATTCAATTGCTCAGTTGGAAGCGGATCAACTTTCTCAGCCTTGCCATC  Raphanus sativus cv GSK3-1
FY438570       --> TCATTCAATTGCTCAGTTGGAAGCGGATCAACTTTCTCAGCCTTGCCATC  Raphanus sativus cv GSK3-1
FY444241       --> TCATTCAATTGCTCAGTTGGAAGCGGATCAACTTTCTCAGCCTTGCCATC  Raphanus sativus cv GSK3-1

               301    -    351
UN23510        --> TTTCTTAGGGATTATCAGACCGTACCCTCCTTCTTTTCTCTTGTACACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570143       <-- ...................................TTCTCT-GTACACTA
FD556364       <-- ..................................................
EV543905       --> TTTCTTAGGGATTATCAGATCGTACCCTCCTTCTTTTCTCTTGTACACTA
EX776503       --> TTTCTTAGGGATTATCAGACCGTACCCTCCTTCTTTTCTCTTGTACACTA
EV531632       --> TTTCTTAGGGATTATCAAACCGTACCCTCCTTCTTTTCTCTTGTACACTA
EV571244       --> TTTCTTAGGGATTATCAGACCGTACCCTCCTTCTTTTCTCTTGTACACTA
EV572251       --> TTTCTTAGGGATTATCAGACCGTACCCTCCTTCTTTTCTCTTGTACACTA
EV574508       --> TTTATTAGGGATTATCAGACCGTACCCTCCTTCTTTTCTCTTGTACACTA
FD530118       --> TTTCTTAGGGATTATCAGACCGTACCCTCCTTCTTTTCTCTTGTACACTA
FD942722       --> TTTCTTAGGGATTATCAGACCGTACCCTCCTTCTTTTCTCTTGTACACTA
FD960700       --> TTTCTTAGGGATTATCAAACCGTACCCTCCTTCTTTTCTCTTGTACACTA
FD960917       --> TTTCTTAGGGATTATCAGACCGTACCCTCCTTCTTTTCTCTTGTACACTA
EV573903       --> TTTCTTAGGGATTATCAGACCGTACCCTCCTTCTTTTCTCTTGTACACTA
FY430128       --> TTTCTTAGGGATTATCAGACCGTACCCTCCTTCTTTTCTCTTGTACACTA
FY438570       --> TTTCTTAGGGATTATCAGACCGTACCCTCCTTCTTTTCTCTTGTACACTA
FY444241       --> TTTCTTAGGGATTATCAGACCGTACCCTCCTTCTTTTCTCTTGTACACTA

               351    -    401
UN23510        --> TATTTATCTCACCGGTTTCTTCATTCTGGAAGCCGTAGAAATCATGAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570143       <-- TATTTATCTCACCGGTTTCTTCAT-CTGGAAGCCGTAGAAATCATGAGCT  Raphanus raphanistrum subsp. landra
FD556364       <-- ..............................................AGCT  Raphanus raphanistrum subsp. landra
EV543905       --> TATTTATCTCACCGGTTTCTTCATTCTGGAAGCCATAGAAATCATGAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776503       --> TATTTATCTCACCGGTTTCTTCATTCTGGAAGCCGTAAAAATCATGAGCT  Raphanus raphanistrum subsp. landra
EV531632       --> TATTTATCTCACCGGTTTCTTCATTCTGGAAGCCGTAAAAATCATGAGCT  Raphanus raphanistrum subsp. maritimus
EV571244       --> TATTTATCTCACCGGTTTCTTCATTCTGGAAGCCGTAGAAATCATGAGCT  Raphanus raphanistrum subsp. landra
EV572251       --> TATTTATCTCACCGGTTTCTTCATTCTGGAAGCCGTAGAAATCATGAGCT  Raphanus raphanistrum subsp. landra
EV574508       --> TATTTATCTCACCGGTTTCTTCATTCTGGAAGCCGTAGAAATCATGAGCT  Raphanus raphanistrum subsp. landra
FD530118       --> TATTTATCTCACCGGTTTCTTCATTCTGGAAGCCGTAAAAATCATGAGCT  Raphanus raphanistrum subsp. maritimus
FD942722       --> TATTTATCTCACCGGTTTCTTCATTCTGGAAGCCGTAAAAATCGTGAGCT  Raphanus sativus cv Early Scarlet Globe
FD960700       --> TATTTATCTCACCGGTTTCTTCATTCTGGAAGCCGTAAAAATCATGAGCT  Raphanus raphanistrum subsp. maritimus
FD960917       --> TATTTATCTCACCGGTTTCTTCATTCTGGAAGCCGTAAAAATCATGAGCT  Raphanus raphanistrum subsp. maritimus
EV573903       --> TATTTATCTCACCGGTTTCTTCATTCTGGAAGCCGTAGAAATCATGAGCT  Raphanus raphanistrum subsp. landra
FY430128       --> TATTTATCTCACCGGTTTCTTCATTCTGGAAGCCGTAGAAATCGTGAGCT  Raphanus sativus cv GSK3-1
FY438570       --> TATTTATCTCACCGGTTTCTTCATTCTGGAAGCCGTAGAAATCGTGAGCT  Raphanus sativus cv GSK3-1
FY444241       --> TATTTATCTCACCGGTTTCTTCATTCTGGAAGCCGTAGAAATCGTGAGCT  Raphanus sativus cv GSK3-1

               401    -    451
UN23510        --> ACTAACTCCAGCTGCTCCACTGCCTCAGAGACGGTCAATGGTGGCATCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570143       <-- ACTAACTCCAGCTGCTCCACTGC-TCAGAGACAGTCAATGGTGGCATCTC
FD556364       <-- ACTAACTCCAGCTGCTCCACTGCCTCAGAGACAGTCAATGGTGGCATCTC
EV543905       --> ACTAACTCCAGCTGCTCCACTGCCTCAGAGACGATCAATGGTGGCATCTC
EX776503       --> ACTAACTCCAGCTGCTCCACTGCCTCAGAAACAGTCAATGGTGGCATCTC
EV531632       --> ACTAACTCCAGCTGCTCCACTGCCTCAAAGACGGTCAATGGTGGCATCTC
EV571244       --> ACTAACTCCAGCTGCTCCACTGCCTCAGAGACGGTCAATGGTGGCATCTC
EV572251       --> ACTAACTCCAGCTGCTCCACTGCCTCAGAGACAGTCAATGGTGGCATCTC
EV574508       --> ACTAACTCCAGCTGCTCCACTGCCTCAGAGACAGTCAATGGTGGCATCTC
FD530118       --> ACTAACTCCAGCTGCTCCACTGCCTCAGAGACGGTCAATGGTGGCATCTC
FD942722       --> ACTAACTCCAGCCGCTCCACTGCCTCAGAGACGGTCAATGGTGGCATCTC
FD960700       --> ACTAACTCCAGCTGCTCCACTGCCTCAGAGACGGTCAATGGTGGCATCTC
FD960917       --> ACTAACTCCAGCTGCTCCACTGCCTCAAAAACGGTCAATGGTGGCATCTC
EV573903       --> ACTAACTCCAGCTGCTCCACTGCCTCAGAGACAGTCAATGGTGGCATCTC
FY430128       --> ACTAACTCCAACTGCTCCACTGCCTCTGAGACGGTCAATGGTGGCATCTC
FY438570       --> ACTAACTCCAACTGCTCCACTGCCTCTGAGACGGTCAATGGTGGCATCTC
FY444241       --> ACTAACTCCAACTGCTCCACTGCCTCTGAGACGGTCAATGGTGGCATCTC

               451    -    501
UN23510        --> AAAGTACTTGGTACGCACAATCTCCTTGATCAAATCATCCTCTTCTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570143       <-- AAAGTACTTGGTACGCACAATCTCTTTGATCAAATCATCCTCTTCTTCTT  Raphanus raphanistrum subsp. landra
FD556364       <-- AAAGTACTTGGTACGCACAATCTC-TTGATCAAATCATCCTCTTCTTCTT  Raphanus raphanistrum subsp. landra
EV543905       --> AAAGTACTTGGTACGCACAATCTCCTTGACCAAATCATCCTCTTCTCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776503       --> AAAGTACTTGGTACGCACAATCTCCTTGATCAAATCATCCTCTTCTTCTT  Raphanus raphanistrum subsp. landra
EV531632       --> AAAGTACTTGGTACGCACAATCTCCTTGACCAAACCATCCTCTTCTCCTT  Raphanus raphanistrum subsp. maritimus
EV571244       --> AAAGTACTTGGTACGCACAATCTCCTTGACCAAATCATCCTCTTCTCCTT  Raphanus raphanistrum subsp. landra
EV572251       --> AAAGTACTTGGTACGCACAATCTCCTTGATCAAATCATCCTCTTCTTCTT  Raphanus raphanistrum subsp. landra
EV574508       --> AAAGTACTTGGTACGCACAATCTCCTTGATCAAATCATCCTCTTCTTCTT  Raphanus raphanistrum subsp. landra
FD530118       --> AAAGTACTTGGTACGCACAATCTCCTTGACCAAATCATCCTCTTCTCCTT  Raphanus raphanistrum subsp. maritimus
FD942722       --> AAAGTACTTGGTACGCACAATCTCCTTGATCAAATCATCCTCTTCTTCTT  Raphanus sativus cv Early Scarlet Globe
FD960700       --> AAAGTACTTGGTACGCACAATCTCCTTGACCAAATCATCCTCTTCTCCTT  Raphanus raphanistrum subsp. maritimus
FD960917       --> AAAGTACTTGGTACGCACAATCTCCTTGACCAAATCATCCTCTTCTCCTT  Raphanus raphanistrum subsp. maritimus
EV573903       --> AAAGTACTTGGTACGCACAATCTCCTTGATCAAATCATCCTCCTCTTCTT  Raphanus raphanistrum subsp. landra
FY430128       --> AAAGTACTTGGTACGCACAATCTCCTTGATCAAATCATCCTCTTCTTCTT  Raphanus sativus cv GSK3-1
FY438570       --> AAAGTACTTGGTACGCACAATCTCCTTGATCAAATCATCCTCTTCTTCTT  Raphanus sativus cv GSK3-1
FY444241       --> AAAGTACTTGGTACGCACAATCTCCTTGATCAAATCATCCTCTTCTTCTT  Raphanus sativus cv GSK3-1

               501    -    551
UN23510        --> CTCCAGCAACGTCCTCAGGATCCTCCACAACGGGCTCAATCACTGGCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570143       <-- CTCCAGCAACGTCCTCAGGATCCTCCATAACGGGCTCAATCACTGGCTCT  Raphanus raphanistrum subsp. landra
FD556364       <-- CTCCAGCAACGTCCTCAGGATCCTCCACAACGGGCTCAATCACTGGCTCT  Raphanus raphanistrum subsp. landra
EV543905       --> CTCCAGCAACGTCCTCAGGATCCTCCACAACGGGCTCAATCACAGGCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776503       --> CTCCAGCAACGTCCTCAGGATCCTCCACAACGGGCTCAATCACTGGCTCT  Raphanus raphanistrum subsp. landra
EV531632       --> CTCCAGCAACGTCCTCAGGATCCTCCACAACGGGCTCAATCACAGGCTCT  Raphanus raphanistrum subsp. maritimus
EV571244       --> CTCCAGCAACGTCCTCAGGATCCTCCACAACGGGCTCAATCACAGGCTCT  Raphanus raphanistrum subsp. landra
EV572251       --> CTCCAGCAACGTCCTCAGGATCCTCCACAACGGGCTCAATCACTGGCTCT  Raphanus raphanistrum subsp. landra
EV574508       --> CTCCAGCAACGTCCTCAGGATCCTCCATAACGGGCTCAATCACTGGCTCT  Raphanus raphanistrum subsp. landra
FD530118       --> CTCCAGCAACGTCCTCAGGATCCTCCACAACGGGCTCAATCACAGGCTCT  Raphanus raphanistrum subsp. maritimus
FD942722       --> CCCCAGCAACGTCCTCAGGATCCTCCACAACGGGCTCAATCACTGGCTCT  Raphanus sativus cv Early Scarlet Globe
FD960700       --> CTCCAGCAACGTCCTCAGGATCCTCCACAACGGGCTCAATCACAGGCTCT  Raphanus raphanistrum subsp. maritimus
FD960917       --> CTCCAGCAACGTCCTCAGGATCCTCCACAACGGGCTCAATCACAGGCTCT  Raphanus raphanistrum subsp. maritimus
EV573903       --> CTCCAGCAACGTCCTCAGGATCCTCCACAACGGGCTCAATCACTGGCTCT  Raphanus raphanistrum subsp. landra
FY430128       --> CTCCAGCAACGTCCTCAGGATCCTCCACAACGGGCTCAATCACTGGCTCT  Raphanus sativus cv GSK3-1
FY438570       --> CTCCAGCAACGTCCTCAGGATCCTCCACAACGGGCTCAATCACTGGCTCT  Raphanus sativus cv GSK3-1
FY444241       --> CTCCAGCAACGTCCTCAGGATCCTCCACAACGGGCTCAATCACTGGCTCT  Raphanus sativus cv GSK3-1

               551    -    601
UN23510        --> CTCACCTTCGACCTGTTGAAACCTTTCATGTGCCTTCCATGGTCAGAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570143       <-- CTCACCTTCGACCTGTTGAAACCTTTCATGTGCCTTCCATGGTCAGAGTC
FD556364       <-- CTCACCTTCGACCTGTTGAAACCTTTCATGTGCCTTCCATGGTCAGAGTC
EV543905       --> CTCACCTTCGACCTGTTGAAACCTTTCATGTGCCTTCCATGGTCAGAGTC
EX776503       --> CTCACCTTCGACCTGTTGAAACCTTTCATGTGCCTTCCATGGTCAGAGTC
EV531632       --> CTCACCTTCGACCTGTTGAAACCTTTCATGTGCCTTCCATGGTCAGAGTC
EV571244       --> CTCACCTTCGACCTGTTGAAACCTTTCATGTGCCTTCCATGGTCAGAGTC
EV572251       --> CTCACCTTCGACCTGTTGAAACCTTTCATGTGCCTTCCATGGTCAGAGTC
EV574508       --> CTCACCTTCGACCTGTTGAAACCTTTCATGTGCCTTCCATGGTCAGAGTC
FD530118       --> CTCACCTTCGACCTGTTGAAACCTTTCATGTGCCTTCCATGGTCAGAGTC
FD942722       --> CTCACCTTCGACCTGTTGAAACCTTTCATGTGCCTTCCATGGTCAGAGTC
FD960700       --> CTCACCTTCGACCTGTTGAAACCTTTCATGTGCCTTCCATGGTCAGAGTC
FD960917       --> CTCACCTTCGACCTGTTGAAACCTTTCATGTGCCTTCCATGGTCAGAGTC
EV573903       --> CTCACCTTCGACCTGTTGAAACCTTTCATGTGCCTTCCATGGTCAGAGTC
FY430128       --> CTCACCTTCGACCTGTTGAAACCTTTCATGTGCCTTCCATGGTCAGAGTC
FY438570       --> CTCACCTTCGACCTGTTGAAACCTTTCATGTGCCTTCCATGGTCAGAGTC
FY444241       --> CTCACCTTCGACCTGTTGAAACCTTTCATGTGCCTTCCATGGTCAGAGTC

               601    -    651
UN23510        --> CTTCTCCTTGATCTTCCTCAGCTTCCTCTGTATTATCGTTGAAACCAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570143       <-- CTTCTCCTTGATCTTCCTCAGCTTCCTCTGTATAATCGTTGATACCAAGT
FD556364       <-- CTTCTCCTTGATCTTCCTCAGCTTCCTCTGTATAATCGTTGATACCAAGT
EV543905       --> CTTCTCCTTGATCTTCCTCAGCTTCCTCTGTATTATCGTTGAAACCAAGT
EX776503       --> CTTCTCCTTGATCTTCCTCAGCTTCCTCTGTATAATCGTTGATACCAAGT
EV531632       --> CTTCTCCTTGATCTTCCTCAGCTTCCTCTGTATTATCGTTGAAACCAAGT
EV571244       --> CTTCTCCTTGATCTTCCTCAGCTTCCTCTGTATTATCGTTGAAACCAAGT
EV572251       --> CTTCTCCTTGATCTTCCTCAGCTTCCTCTGTATAATCGTTGATACCAAGT
EV574508       --> CTTCTCCTTGATCTTCCTCAGCTTCCTCTGTATAATCGTTGATACCAAGT
FD530118       --> CTTCTCCTTGATCTTCCTCAGCTTCCTCTGTATTATCGTTGAAACCAAGT
FD942722       --> CTTCTCCTTGATCTTCCCCAGCTTCCTCTGTATTATCGTTGAAACCAAGT
FD960700       --> CTTCTCCTTGATCTTCCTCAGCTTCCTCTGTATTATCGTTGAAACCAAGT
FD960917       --> CTTCTCCTTGATCTTCCTCAGCTTCCTCTGTATTATCGTTGAAACCAAGT
EV573903       --> CTTCTCCTTGATCTTCCTCAGCTTCCTCTGTATAATCGTTGATACCAAGT
FY430128       --> CTTCTCCTTGATCTTCCTCAGCTTCCTCTGTATTATCGTTGAAACCAAGT
FY438570       --> CTTCTCCTTGATCTTCCTCAGCTTCCTCTGTATTATCGTTGAAACCAAGT
FY444241       --> CTTCTCCTTGATCTTCCTCAGCTTCCTCTGTATTATCGTTGAAACCAAGT

               651    -    701
UN23510        --> CGATACAAGCGTATACCGTCTCAGCATCTTCCTCACCGCGCACAACACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570143       <-- CGATACAAGCGTATACCGTCTCAGCATCTTCCTCGCCGCGCACAACACCA
FD556364       <-- CGATACAAGCGTATACCGTCTCAGCATCTTCCTCGCCGCGCACAACACCA
EV543905       --> CGATACAAGCGTATACCGTCTCAGCATCTTCCTCACCGCGCACAACACCA
EX776503       --> CGATACAAGCGTATACCGTCTCAGCATCTTCCTCGCCGCGCACAACACCA
EV531632       --> CGATACAAGCGTATACCGTCTCAGCATCTTCCTCACCGCGCACAACACCA
EV571244       --> CGATACAAGCGTATACCGTCTCAGCATCTTCCTCACCGCGCACAACACCA
EV572251       --> CGATACAAGCGTATACCGTCTCAGCATCTTCCTCGCCGCGCACAACACCA
EV574508       --> CGATACAAGCGTATACCGTCTCAGCATCTTCCTCGCCGCGCACAACACCA
FD530118       --> CGATACAAGCGTATACCGTCTCAGCATCTTCCTCACCGCGCACAACACCA
FD942722       --> CGATACAAGCGTATACCGTCTCAGCATCTTCCTCACCGCGCACAACACCA
FD960700       --> CGATACAAGCGTATACCATCTCAGCATCTTCCTCA...............
FD960917       --> CGATACAAGCGTATACCATCTCAGCATCTTCCTCACCGCGCACAACACCA
EV573903       --> CGATACAAGCGTATACCGTCTCAGCATCTTCCTCGCCGCGCACAACACCA
FY430128       --> CGATACAAGCGTATACCGTCTCAGCATCTTCCTCACCGCGCACAACGCCA
FY438570       --> CGATACAAGCGTATACCGTCTCAGCATCTTCCTCACCGCGCACAACGCCA
FY444241       --> CGATACAAGCGTATACCGTCTCAGCATCTTCCTCACCGCGCACAACGCCA

               701    -    751
UN23510        --> TGCTTCTTTGTAAACAGTGTTACCTCGCATCTACGGATCTTGGGTCCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570143       <-- TGCTTCTTTGTAAACAGTGTTACCTCGCATCTACGGATCTTAGGTCCTTT
FD556364       <-- TGCTTCTTTGTAAACAGTGTTACCTCGCATCTACGGATCTTAGGTCCTTT
EV543905       --> TGCTTCTTTGTAAACAGTGTTACCTCGCATC...................
EX776503       --> TGCTTCTTTGTAAACAGTGTTACCTCGCATCTACGGATC...........
EV531632       --> TGCTTCTTTGTAAACAGTGTTACCTCGCATCTACGGATCTTGGGTCCTTT
EV571244       --> TGCTTCTTTGTAAACAGTGTTACCTCGCATCTAAGGATCTTGGGTCCTTT
EV572251       --> TGCTTCTTTGTAAACAGTGTTACCTCGCATCTACGGATCTTAGGTCCTTT
EV574508       --> TGCTTCTTTGTAAACAGTGTTACCTCGCATCTACGGATCTTAGGTCCTTT
FD530118       --> TGCTTCTTTGTAAACAGTGTTACCTCGCATCTACGGATCTTGGGTCCTTT
FD942722       --> TGCTTCTTTGTAAACAGTGTTACCTAGCATCTACGGATCTTGGGTCCTTT
FD960700       --> ..................................................
FD960917       --> TGCTTCTTTGTAAACAGTGTTACCTCGCATCTACGGATCTTGGGTCCTTT
EV573903       --> TGCTTCTTTGTAAACAGTGTTACCTCGCATCTACGGATCTTAGGTCCTTT
FY430128       --> TGCTTCTTTGTAAACAGTGTTACCTCGCATCTACGGATCTTGGGTCCTTT
FY438570       --> TGCTTCTTTGTAAACAGTGTTACCTCGCATCTACGGATCTTGGGTCCTTT
FY444241       --> TGCTTCTTTGTAAACAGTGTTACCTCGCATCTACGGATCTTGGGTCCTTT

               751    -    801
UN23510        --> ACCAAACTCTCCACCTCGAACAGAGAGTCTCACATCAACTTCTCTGACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570143       <-- ACCAAACTCTCCACCTCGAACAGAGAGTCTCACGTCAACTTCTCTGGCGA
FD556364       <-- ACCAAACTCTCCACCTCGAACAGAGAGTCTCACGTCAACTTCTCTGACGA
EV543905       --> ..................................................
EX776503       --> ..................................................
EV531632       --> ACCAAACTCTCCACCTCGAACAGAGAGTCTCACATCAACTTCTCTGACGA
EV571244       --> ACCAAACTCTCCACCTCGAACAGAGAGTCTCACATCAACTTCTCTGACGA
EV572251       --> ACCAAACTCTCCACCTCGAACAGAGAGTCTCACGTCAACTTCTCTGACGA
EV574508       --> ACCAAACTCTCCACCTCGAACAGAGAGTCTCACGTCAACTTCTCTGGCGA
FD530118       --> ACCAAACTCTCCACCTCGAACAGAGAGTCTCACATCAACTTCTCTGACGA
FD942722       --> ACCAAACTCTCCACCTCGAACAGAGAGTCTCACATCAACTTCTCTGACGA
FD960700       --> ..................................................
FD960917       --> ACCAAACTCTCCACCTCGAACAGAGAGTCTCACATCAACTTCTCTGACGA
EV573903       --> ACCAAACTCTCCACCTCGAACAGAGAGTCTCACGTCAACTTCTCTGACGA
FY430128       --> ACCAAACTCTCCACCTCGAACAGAGAGTCTCACATCAACTTCTCTGACGA
FY438570       --> ACCAAACTCTCCACCTCGAACAGAGAGTCTCACATCAACTTCTCTGACGA
FY444241       --> ACCAAACTCTCCACCTCGAACAGAGAGTCTCACATCAACTTCTCTGACGA

               801    -    851
UN23510        --> GATGACTGTGCTTCTGAACAGCTTTTCCTACTTTGTCCTCAACATGCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570143       <-- GATGACTGTGCTTCTGAACAGCTTTTCCTACTTTGTCCTCCACATGCTGC
FD556364       <-- GATGACTGTGCTTCTGAACAGCTTTTCCTACTTTGTCCTCCACATGCTGC
EV543905       --> ..................................................
EX776503       --> ..................................................
EV531632       --> GATGACTGTGCTTCTGAACAGCTTTTCCT.....................
EV571244       --> GATGACTGTGCTTCTGAACAGCTTTTCCTACTTTGTCCTCAACATGCTGC
EV572251       --> GATGACTGTGCTTCTGAA................................
EV574508       --> GATGACTGTGCTTCTGAACAGCTTTTCCTACTTTGTCCTCCACATGCTGC
FD530118       --> GATGACTGTGCTTCTGAACAGCTTTTCCTACTTTGTCCTCAACATGCTGC
FD942722       --> GATGACTGTGCTTCTGAACAGCTTT.........................
FD960700       --> ..................................................
FD960917       --> GATGACTGTGCTTCTGAACAGCTTTTCCTACTTTGTCCTCAACATGCTGC
EV573903       --> GATGACTGTGCTTCTGAACAGCTTTTCCTACTTTGTCCTCCACATGCTGC
FY430128       --> GATGACTGTGCTTCTGAACAGCTTTTCCTACTTTGTCCTCAACATGCTGC
FY438570       --> GATGACTGTGCTTCTGAACAGCTTTTCCTACTTTGTCCTCAACATGCTGC
FY444241       --> GATGACTGTGCTTCTGAACAGCTTTTCCTACTTTGTCCTCAACATGCTGC

               851    -    901
UN23510        --> TTGATTGCCTCTGATAACTCGAGGTTTTTGCCTTGGATGATCAGCTTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570143       <-- TTGATTGCCTCTGATAACTCGAGGTTTTTGCCTTGGATGATCAGCTTGAC
FD556364       <-- TTGATTGCCTCTGATAGCTCGAGGTTTTTGCCTTGGATGATCAGCTTGAC
EV543905       --> ..................................................
EX776503       --> ..................................................
EV531632       --> ..................................................
EV571244       --> TTGATTGCCTCTGATAACTCGAGGTTTTTGCCTTG...............
EV572251       --> ..................................................
EV574508       --> TTGATTGCCTCTGATAACTCGAGGTTTTTGCCTTGGATGATCAGCTTGAC
FD530118       --> TTGATTGCCTCTGATAACTCGAGGTTTT-GCCTTGGATGATCAGCTTGAC
FD942722       --> ..................................................
FD960700       --> ..................................................
FD960917       --> TTGATTGCCTCTGATA..................................
EV573903       --> TTGATTGCCTCTGATA..................................
FY430128       --> TTGATTGCCTCTGATAACTCGAGGTTTTTGCCTTGGATGATCAGCTTGAC
FY438570       --> TTGATTGCCTCTGATAACTCGAGGTTTTTGCCTTGGATGATCAGCTTGAC
FY444241       --> TTGATTGCCTCTGATAACTCGAGGTTTTTGCCTTGGATGATCAGCTTGAC

               901    -    951
UN23510        --> GGAAGCGAGAGAACCGTCCCACGACATTTTCACTGTTGATGAGCTTCTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570143       <-- GGAAGCGAGAGAACCGTCCCACGACATTTTCACTGTTGATGAGCTTCTAC
FD556364       <-- GGAAGCGAGAGGACCGTCCCACGACATTTTCACTGTTGATGAGCTTCTAC
EV543905       --> ..................................................
EX776503       --> ..................................................
EV531632       --> ..................................................
EV571244       --> ..................................................
EV572251       --> ..................................................
EV574508       --> GGAAGCGAGAGAACCGTCCCACGACATTTTCACTGTTGATGAGCTTCTAC
FD530118       --> G-AAGCGAGAGA-CCGTCCCACGAC.........................
FD942722       --> ..................................................
FD960700       --> ..................................................
FD960917       --> ..................................................
EV573903       --> ..................................................
FY430128       --> GGAAGCGAGAGAACCGTCCCACGACATTT.....................
FY438570       --> GGAAGCGAGAGAACCGTCCCACG...........................
FY444241       --> GGAAGCGAGAGAACCGTCCCACGACATTTTCACTGCGGACGAGCTTCTCC

               951    -   1001
UN23510        --> GACCAGTCGAGGGTAGGCGATCATGGTGAGTGATACGGCCTAGGAAGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570143       <-- GACCAGTCGAGGGTAGGCGATCATGGTGAGTGATACGGCCTAGGAAGCCT
FD556364       <-- GACCAGTAGAGGGTAGGCGATCATGGTGAGTGATACGGCCTAGGAAGCCT
EV543905       --> ..................................................
EX776503       --> ..................................................
EV531632       --> ..................................................
EV571244       --> ..................................................
EV572251       --> ..................................................
EV574508       --> G.................................................
FD530118       --> ..................................................
FD942722       --> ..................................................
FD960700       --> ..................................................
FD960917       --> ..................................................
EV573903       --> ..................................................
FY430128       --> ..................................................
FY438570       --> ..................................................
FY444241       --> GACCAGTCGAGGGTAGGCGATCATG.........................

               1001   -   1051
UN23510        --> GACCGGAGAGTCTTGGAATCAGAGCGTCTCCCCACCATTGAGACAACCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570143       <-- GACCGGAGAGTCTTGGAATCAGAGCGTCTCCCCACCATTGAGACAACCGT
FD556364       <-- GACCGGAGAGTCTTGGAATCAGAGCGTCTCCCCACCATTGAGACAACCGT
EV543905       --> ..................................................
EX776503       --> ..................................................
EV531632       --> ..................................................
EV571244       --> ..................................................
EV572251       --> ..................................................
EV574508       --> ..................................................
FD530118       --> ..................................................
FD942722       --> ..................................................
FD960700       --> ..................................................
FD960917       --> ..................................................
EV573903       --> ..................................................
FY430128       --> ..................................................
FY438570       --> ..................................................
FY444241       --> ..................................................

               1051   -   1101
UN23510        --> GGAGGAAGATGGGCATGTTGGAGAAGTGATAGAGACGTTGCAGTGGGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570143       <-- GGAGGAAGATGGGCATGTTGGAGAAGTGATAGAGACGTTGCAGTGGGGTA
FD556364       <-- GGAGGAAGATGGGCATGCTGGAGAAGTGATAGAGACGTCGCAGTGGGGTA
EV543905       --> ..................................................
EX776503       --> ..................................................
EV531632       --> ..................................................
EV571244       --> ..................................................
EV572251       --> ..................................................
EV574508       --> ..................................................
FD530118       --> ..................................................
FD942722       --> ..................................................
FD960700       --> ..................................................
FD960917       --> ..................................................
EV573903       --> ..................................................
FY430128       --> ..................................................
FY438570       --> ..................................................
FY444241       --> ..................................................

               1101   -   1151
UN23510        --> ACTTGGTATGAGAGAACCCTAAGAGTGTCGTCATTTGATTTGATTTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570143       <-- ACTTGGTATGAGAGAACCCTAAGAGTGTCGTCATTTGATTTGATTTGAGA
FD556364       <-- ACTTGGTATGAGAGAACCCTAAGAGTGTCGTCATTTGATTTGATTTGAGA
EV543905       --> ..................................................
EX776503       --> ..................................................
EV531632       --> ..................................................
EV571244       --> ..................................................
EV572251       --> ..................................................
EV574508       --> ..................................................
FD530118       --> ..................................................
FD942722       --> ..................................................
FD960700       --> ..................................................
FD960917       --> ..................................................
EV573903       --> ..................................................
FY430128       --> ..................................................
FY438570       --> ..................................................
FY444241       --> ..................................................

               1151   -   1201
UN23510        --> GAGAGAGAGATTCAGAGATTGTTTGTGAAGTGAAGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570143       <-- GAGAGAGAGATTCAGAGATTGTTTGTGAAGTGAAGTCC
FD556364       <-- GAGAGAG--ATTCAGAGATTGTTTccc...........
EV543905       --> ......................................
EX776503       --> ......................................
EV531632       --> ......................................
EV571244       --> ......................................
EV572251       --> ......................................
EV574508       --> ......................................
FD530118       --> ......................................
FD942722       --> ......................................
FD960700       --> ......................................
FD960917       --> ......................................
EV573903       --> ......................................
FY430128       --> ......................................
FY438570       --> ......................................
FY444241       --> ......................................