1      -     51
UN23517        --> CACACTCTCTACAACAGTAAAACAAATCTCTCTCTTCTGTGAGCTTTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY935843       <-- CACACTCTCTACAACAGTAAAACAAATCCCTCTCTTCTGTGAGCTTTGAG  Raphanus sativus cv Early Scarlet Globe
EW729792       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY935236       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY926659       <-- ..................................................  Raphanus sativus var. oleiformis
EX898634       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD958800       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV541382       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566094       <-- ..................................................  Raphanus sativus var. oleiformis
FD969576       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974410       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900315       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY929113       <-- ..................................................  Raphanus sativus var. oleiformis
FD960407       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD531577       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY936892       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY936919       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY935093       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD538775       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969466       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542946       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900114       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV544708       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899071       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY940007       --> .ACACTCTCTACAACAGTAAAACAAATCCCTCTCTTCTGTGAGCTTTGAG  Raphanus sativus cv Early Scarlet Globe
EY933707       --> ........ggACAACAGTAAAACAAATCTCTCTCTTCTGTGAGCTTTGAG  Raphanus sativus var. oleiformis
EY939085       --> ........ggACAACAGTAAAACAAATCTCTCTCTTCTGTGAGCTTTGAG  Raphanus sativus cv Early Scarlet Globe
FD562109       --> ........ggACAACAGTAAAACAAATCTCTCTCTTCTGTGAGCTTTGAG  Raphanus sativus var. oleiformis
FD962206       --> ........ggACAACAGTAAAACAAATATCTCTCTTCTGTGAGCTTTGAG  Raphanus raphanistrum subsp. maritimus
EW725198       --> ..........ggAACAGTAAAACAAATATCTCTCTTCTGTGAGCTTTGAG  Raphanus sativus cv Early Scarlet Globe
EX894804       --> ..........ggAACAGTAAAACAAATCTCTCTCTTCTGTGAGCTTTGAG  Raphanus sativus cv Early Scarlet Globe
EX896375       --> ..........ggAACAGTAAAACAAATCTCTCTCTTCTGTGAGCTTTGAG  Raphanus sativus cv Early Scarlet Globe
EY941277       --> ..........ggAACAGTAAAACAAATCTCTCTCTTCTGTGAGCTTTGAG  Raphanus sativus cv Early Scarlet Globe
EX771118       --> .............ggAGTGAAACAAATATCTCTCTTCTGTGAGCTTTGAG  Raphanus raphanistrum subsp. landra
EX894290       --> ..............gAGTAAAACAAATATCTCTCTTCTGTGAGCTTTGAG  Raphanus sativus cv Early Scarlet Globe
EY939267       --> .............ggAGTAAAACAAATATCTCTCTTCTGTGAGCTTTGAG  Raphanus sativus cv Early Scarlet Globe
FD964390       --> .............ggAGTGAAACAAATATCTCTCTTCTGTGAGCTTTGAG  Raphanus raphanistrum subsp. maritimus
EV539068       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549180       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896142       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV535144       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930307       --> ..................................................  Raphanus sativus var. oleiformis

               51     -    101
UN23517        --> TGATCGCTAAATACAACAAATGGCGAACGAGGTGATCCTTCTTGATTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY935843       <-- TGATCGCTAAATACAACAAATGGCGAACGAGGTGATCCTTCTTGATTTCT
EW729792       <-- ..........................................TGATTTCT
EY935236       <-- ..........................................TGATTTCT
EY926659       <-- ...........................................GATTTCT
EX898634       <-- ..................................................
FD958800       <-- ..................................................
EV541382       <-- ..................................................
FD566094       <-- ..................................................
FD969576       <-- ..................................................
FD974410       <-- ..................................................
EX900315       <-- ..................................................
EY929113       <-- ..................................................
FD960407       <-- ..................................................
FD531577       <-- ..................................................
EY936892       <-- ..................................................
EY936919       <-- ..................................................
EY935093       <-- ..................................................
FD538775       <-- ..................................................
FD969466       <-- ..................................................
EV542946       <-- ..................................................
EX900114       <-- ..................................................
EV544708       <-- ..................................................
EX899071       <-- ..................................................
EY940007       --> TGATCGCTAAATACAACAAATGGCGAACGAGGTGATCCTTCTTGATTTCT
EY933707       --> TGATCGCTAAATAC---TAATGGCGAACGAGGTGATCCTTCTTGATTTCT
EY939085       --> TGATCGCTAAATACAACAAATGGCGAACGAGGTGATCCTTCTTGATTTCT
FD562109       --> TGATCGCTAAATACAACAAATGGCGAACGAGGTGATCCTTCTTGATTTCT
FD962206       --> TGATCGCTAAATACAACAAATGGCGAACGAGGTGATCCTTCTTGATTTCT
EW725198       --> TGATCGCTAAATACAACAAATGGCGAACGAGGTGATCCTTCTTGATTTCT
EX894804       --> TGATCGCTAAATACAACAAATGGCGAACGAGGTGATCCTTCTTGATTTCT
EX896375       --> TGATCGCTAAATACAACAAATGGCGAACGAGGTGATCCTTCTTGATTTCT
EY941277       --> TGATCGCTAAATACAACAAATGGCGAACGAGGTGATCCTTCTTGATTTCT
EX771118       --> TGATCGCTAAATACAACAAATGGCGAACGAGGTGATCCTTCTTGATTTCT
EX894290       --> TGATCGCTAAATACAACAAATGGCGAACGAGGTGATCCTTCTTGATTTCT
EY939267       --> TGATCGCTAAATACAACAAATGGCGAACGAGGTGATCCTTCTTGATTTCT
FD964390       --> TGATCGCTAAATACAACAAATGGCGAACGAGGTGATCCTTCTTGATTTCT
EV539068       --> .....................................CTTCTTGATTACT
EV549180       --> ..................................................
EX896142       --> ..................................................
EV535144       --> ..................................................
EY930307       --> ..................................................

               101    -    151
UN23517        --> GGCCTAGCATGTACGGCATGAGGACAAGGATCGCTTTGAGGGAGAAAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY935843       <-- GGCCTAGCATGTACGGCATGAGGACAAGGATCGCTTTGAGGGAGAAAGGT
EW729792       <-- G-CCTAGCATGTACGGCATG-GGACAAGGATCGCTTTGAGGGAGAAAGGT
EY935236       <-- GGCCTAGCATGTACGGCATGAGGACAAGGATCGCTTTGAGGGAGAAAGGT
EY926659       <-- G-CCTAGCATGTACGGCATGAGGACAAGGATCGCTTTGAGGGAGAAAGGT
EX898634       <-- ......................................AGGGAGAAAGGT
FD958800       <-- ......................................AGGGAGAAAGGT
EV541382       <-- .......................................GGGAGAATGGT
FD566094       <-- ........................................GGAGAAAGGT
FD969576       <-- ..........................................AGAAAGGT
FD974410       <-- ..........................................AGAAAGGT
EX900315       <-- ..................................................
EY929113       <-- ..................................................
FD960407       <-- ..................................................
FD531577       <-- ..................................................
EY936892       <-- ..................................................
EY936919       <-- ..................................................
EY935093       <-- ..................................................
FD538775       <-- ..................................................
FD969466       <-- ..................................................
EV542946       <-- ..................................................
EX900114       <-- ..................................................
EV544708       <-- ..................................................
EX899071       <-- ..................................................
EY940007       --> GGCCTAGCATGTACGGCATGAGGACAAGGATCGCTTTGAGGGAGAAAGGT
EY933707       --> GGCCTAGCATGTACGGCATGAGGACAAGGATCGCTTTGAGGGAGAAAGGT
EY939085       --> GGCCTAGCATGTACGGCATGAGGACAAGGATCGCTTTGAGGGAGAAAGGT
FD562109       --> GGCCTAGCATGTACGGCATGAGGACAAGGATCGCTTTGAGGGAGAAAGGT
FD962206       --> GGCCTAGCATGTACGGCATGAGGACAAGGATCGCTTTGAGGGAGAAAGGT
EW725198       --> GGCCTAGCATGTACGGCATGGGGACAAGGATCGCTTTGAGGGAGAAAGGT
EX894804       --> GGCCTAGCATGTACGGCATGAGGACAAGGATCGCTTTGAGGGAGAAAGGT
EX896375       --> GGCCTAGCATGTACGGCATGAGGACAAGGATCGCTTTGAGGGAGAAAGGT
EY941277       --> GGCCTAGCATGTACGGCATGAGGACAAGGATCGCTTTGAGGGAGAAAGGT
EX771118       --> GGCCTAGCATGTACGGCATGAGGACAAGGATCGCTTTGAGGGAGAAAGGT
EX894290       --> GGCCTAGCATGTACGGCATGAGGACAAGGATCGCTTTGAGGGAGAAAGGT
EY939267       --> GGCCTAGCATGTACGGCATGAGGACAAGGATCGCTTTGAGGGAGAAAGGT
FD964390       --> GGCCTAGCATGTACGGCATGAGGACAAGGATCGCTTTGAGGGAGAAAGGT
EV539068       --> GGCCTAGCATGTTCGGCATGAGGACAAGGACCGCCTTGAGGGAGAAAGGT
EV549180       --> ..................................TTTGAGGGAGAAAGGT
EX896142       --> ..................................................
EV535144       --> ..................................................
EY930307       --> ..................................................

               151    -    201
UN23517        --> GTGGAGTTCGAGTACAGGGACGAGAATCTGAGGGAAAAGAGCCC-TCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY935843       <-- GTGGAGTTCGAGTACAGGGACGAGAATCTGAGGGAAAAGAGCCC-TCTGC  Raphanus sativus cv Early Scarlet Globe
EW729792       <-- GTGGAGTTCGAGTACAGG-ACGAGAATCTGAGGGAAAAGAGCCC-TCTGC  Raphanus sativus cv Early Scarlet Globe
EY935236       <-- GTGGAGTTCGAGTACAGGGACGAGAATCTGAGGGAAAAGAGCCC-TCTGC  Raphanus sativus cv Early Scarlet Globe
EY926659       <-- GTCGAGTTCGAGTACAGGGACGAGGATCTGAGGGACAAGAGCCC-TCTGC  Raphanus sativus var. oleiformis
EX898634       <-- GTGGAGTTCGAGTACAGGGACGAGAATCTGAGGGAAAAGAGCCC-TCTGC  Raphanus sativus cv Early Scarlet Globe
FD958800       <-- GTGGAGTTCGAGTACAGGGACGAGAATCTGAGGGAAAAGAGCCC-TCTGC  Raphanus raphanistrum subsp. maritimus
EV541382       <-- GTCGAGTTCGAGTACAGGGACGAGAATCTGAGGGACAAGAGCCC-TCTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566094       <-- GTCGAGTTCGAGTACAGGGACGAGGATCTGAGGGAAAAGAGCCC-TCTGC  Raphanus sativus var. oleiformis
FD969576       <-- GTCGAGTTCGAGTACAGGGACGAGAATCTGAGGGACAAGAGCCC-TCTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974410       <-- GTCGAGTTCGAGTACAGGGACGAGAATCTGAGGGACAAGAGCCC-TCTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900315       <-- .................GGACGAGAATCTGAGGGAAAAGAGCCCCCCTGC  Raphanus sativus cv Early Scarlet Globe
EY929113       <-- ..........................TCTGAGGGAAAAGAGCCC-TCTGC  Raphanus sativus var. oleiformis
FD960407       <-- .........................gTCTGAGGGACAAGAGCCC-TCTGC  Raphanus raphanistrum subsp. maritimus
FD531577       <-- ...........................CTGAGGGAAAAGAGCCC-TCTGC  Raphanus raphanistrum subsp. maritimus
EY936892       <-- ..............................AGGGAAAAGAGCCC-TCTGC  Raphanus sativus cv Early Scarlet Globe
EY936919       <-- ...............................GGGAAAAGAGCCC-TCTGC  Raphanus sativus cv Early Scarlet Globe
EY935093       <-- ....................................AAGAGCCC-TCTGC  Raphanus sativus cv Early Scarlet Globe
FD538775       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969466       <-- .................................................t  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542946       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900114       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV544708       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899071       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY940007       --> GTGGAGTTCGAGTACAGGGACGAGAATCTGAGGGAAAAGAGCCC-TCTGC  Raphanus sativus cv Early Scarlet Globe
EY933707       --> GTCGAGTTCGAGTACAGGGACGAGGATCTGAGGGAAAAGAGCCC-TCTGC  Raphanus sativus var. oleiformis
EY939085       --> GTGGAGTTCGAGTACAGGGACGAGAATCTGAGGGAAAAGAGCCC-TCTGC  Raphanus sativus cv Early Scarlet Globe
FD562109       --> GTCGAGTTCGAGTACAGGGACGAGGATCTGAGGGAAAAGAGCCC-TCTGC  Raphanus sativus var. oleiformis
FD962206       --> GTGGAGTTCGAGTACAGGGACGAGAATCTGAGGGAAAAGAGCCC-TCTGC  Raphanus raphanistrum subsp. maritimus
EW725198       --> GTGGAGTTCGAGTACAGGGACGAGAATCTGAGGGAAAAGAGCCC-TCTGC  Raphanus sativus cv Early Scarlet Globe
EX894804       --> GTGGAGTTCGAGTACAGGGACGAGAATCTGAGGGAAAAGAGCCC-CCTGC  Raphanus sativus cv Early Scarlet Globe
EX896375       --> GTGGAGTTCGAGTACAGGGACGAGAATCTGAGGGAAAAGAGCCC-CCTGC  Raphanus sativus cv Early Scarlet Globe
EY941277       --> GTGGAGTTCGAGTACAGGGACGAGAATCTGAGGGAAAAGAGCCC-TCTGC  Raphanus sativus cv Early Scarlet Globe
EX771118       --> GTCGAGTTCGAGTACAGGGACGAGGATCTGAGGGACAAGAGCCC-TCTGC  Raphanus raphanistrum subsp. landra
EX894290       --> GTGGAGTTCGAGTACAGGGACGAGAATCTGAGGGAAAAGAGCCC-TCTGC  Raphanus sativus cv Early Scarlet Globe
EY939267       --> GTGGAGTTCGAGTACAGGGACGAGAATCTGAGGGAAAAGAGCCC-TCTGC  Raphanus sativus cv Early Scarlet Globe
FD964390       --> GTCGAGTTCGAGTACAGGGACGAGGGTCTGAGGGACAAGAGCCC-TCTGC  Raphanus raphanistrum subsp. maritimus
EV539068       --> GTCGAGTTCGAGTACAGGGACGAGAATCTGAGGGACAAGAGCCC-TCTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549180       --> GTCGAGTTCGAGTACAGGGACGAGAATCTGAGGGACAAGAGCCC-TCTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896142       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV535144       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930307       --> ..................................................  Raphanus sativus var. oleiformis

               201    -    251
UN23517        --> TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY935843       <-- TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
EW729792       <-- TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
EY935236       <-- TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
EY926659       <-- TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
EX898634       <-- TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
FD958800       <-- TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
EV541382       <-- TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
FD566094       <-- TTCTCCATATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
FD969576       <-- TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
FD974410       <-- TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
EX900315       <-- TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
EY929113       <-- TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
FD960407       <-- TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
FD531577       <-- TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
EY936892       <-- TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
EY936919       <-- TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
EY935093       <-- TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
FD538775       <-- ...TCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
FD969466       <-- cctcCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCGCAAC
EV542946       <-- .....CAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
EX900114       <-- .................................................g
EV544708       <-- ..................................................
EX899071       <-- ..................................................
EY940007       --> TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
EY933707       --> TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
EY939085       --> TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
FD562109       --> TTCTCCATATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
FD962206       --> TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
EW725198       --> TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
EX894804       --> TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
EX896375       --> TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
EY941277       --> TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
EX771118       --> TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
EX894290       --> TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
EY939267       --> TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
FD964390       --> TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
EV539068       --> TTCTCCAGATGAACCCGGTCCACAAGAAGATTCCGGTTCTCATCCACAAC
EV549180       --> TTCTCCAGATGAACCCGGTCCACAAGAAGATTACGGTTCTCATCCACAAC
EX896142       --> .................................................g
EV535144       --> ..................................................
EY930307       --> ..................................................

               251    -    301
UN23517        --> GGTAAACCGGTCTGCGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY935843       <-- GGTAAACCGGTCTGCGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus sativus cv Early Scarlet Globe
EW729792       <-- GGTAAACCGGTCTGCGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus sativus cv Early Scarlet Globe
EY935236       <-- GGTAAACCGGTCTGCGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus sativus cv Early Scarlet Globe
EY926659       <-- GATAAACCGGTCTGCGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus sativus var. oleiformis
EX898634       <-- GGTAAACCGGTCTGCGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus sativus cv Early Scarlet Globe
FD958800       <-- GGTAAACCGGTCTGCGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus raphanistrum subsp. maritimus
EV541382       <-- GGTAAACCGGTCTGTGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566094       <-- GGTAAACCGGTCTGTGAATCAGCAATCCAGGTTCAGTACATCGACGAGGT  Raphanus sativus var. oleiformis
FD969576       <-- GGTAAACCGGTCTGTGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974410       <-- GGTAAACCGGTCTGTGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900315       <-- GGTAAACCGGTCTGCGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus sativus cv Early Scarlet Globe
EY929113       <-- GGTAAACCGGTCTGTGAATCAGCAATCCAGGTTCAGTACATCGACGAGGT  Raphanus sativus var. oleiformis
FD960407       <-- GGTAAACCGGTCTGCGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus raphanistrum subsp. maritimus
FD531577       <-- GGTAAACCGGTCTGCGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus raphanistrum subsp. maritimus
EY936892       <-- GGTAAACCGGTCTGCGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus sativus cv Early Scarlet Globe
EY936919       <-- GGTAAACCGGTCTGCGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus sativus cv Early Scarlet Globe
EY935093       <-- GGTAAACCGGTCTGCGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus sativus cv Early Scarlet Globe
FD538775       <-- GGTAAACCGGTCTGCGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969466       <-- GGTAAACCGGTCTGTGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542946       <-- GGTAAACCGGTCTGTGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900114       <-- GGTAAACCGGTCTGCGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus sativus cv Early Scarlet Globe
EV544708       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899071       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY940007       --> GGTAAACCGGTCTGCGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus sativus cv Early Scarlet Globe
EY933707       --> GGTAAACCGGTCTGTGAATCAGCAATCCAGGTTCAGTACATCGACGAGGT  Raphanus sativus var. oleiformis
EY939085       --> GGTAAACCGGTCTGCGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus sativus cv Early Scarlet Globe
FD562109       --> GGTAAACCGGTCTGTGAATCAGCAATCCAGGTTCAGTACATCGACGAGGT  Raphanus sativus var. oleiformis
FD962206       --> GGTAAACCGGTCTGCGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus raphanistrum subsp. maritimus
EW725198       --> GGTAAACCGGTCTGCGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus sativus cv Early Scarlet Globe
EX894804       --> GGTAAACCGGTCTGCGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus sativus cv Early Scarlet Globe
EX896375       --> GGTAAACCGGTCTGCGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus sativus cv Early Scarlet Globe
EY941277       --> GGTAAACCGGTCTGCGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus sativus cv Early Scarlet Globe
EX771118       --> GGTAAACCGGTCTGCGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus raphanistrum subsp. landra
EX894290       --> GGTAAACCGGTCTGCGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus sativus cv Early Scarlet Globe
EY939267       --> GGTAAACCGGTCTGCGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus sativus cv Early Scarlet Globe
FD964390       --> GGTAAACCGGTCTGCGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus raphanistrum subsp. maritimus
EV539068       --> GGTAAACCGGTCTGTGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549180       --> GGTAAACCGGTCTGTGAATCAGCCATCCAGGCTCGGTACATCGACGAGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896142       --> GGTAAACCGGTCTGCGAATCAGCCATCCAGGTTCAGTACATCGACGAGGT  Raphanus sativus cv Early Scarlet Globe
EV535144       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930307       --> ..................................................  Raphanus sativus var. oleiformis

               301    -    351
UN23517        --> CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCTTACCAGAGAGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY935843       <-- CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCATACCAGAGAGCTC
EW729792       <-- CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCTTACCAGAGAGCTC
EY935236       <-- CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCTTACCAGAGAGCTC
EY926659       <-- CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCTTACCAGAGAGCTC
EX898634       <-- CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCTTACCAGAGAGCTC
FD958800       <-- CTGGTCTCACAAGAACCCTATCCTCCCTTTTGATCCTTACCAGAGAGCTC
EV541382       <-- CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCTTACCAGAGAGCTC
FD566094       <-- CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCTTACCAGAGAGCTC
FD969576       <-- CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCTTACCAGAGAGCTC
FD974410       <-- CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCTTACCAGAGAGCTC
EX900315       <-- CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCATACCAGAGAGCTC
EY929113       <-- CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCTTACCAGAGAGCTC
FD960407       <-- CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCTTACCAGAGAGCTC
FD531577       <-- CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCTTACCAGAGAGCTC
EY936892       <-- CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCATACCAGAGGGCTC
EY936919       <-- CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCTTACCAGAGAGCTC
EY935093       <-- CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCATACCAGAGAGCTC
FD538775       <-- CTGGTCTCACAAGAACCCTCTTCTCCCTTCTGATCCTTACCAGAGAGCTC
FD969466       <-- CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCTTACCAGAGAGCTC
EV542946       <-- CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCTTACCAGAGAGCTC
EX900114       <-- CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCATACCAGAGAGCTC
EV544708       <-- ..................................................
EX899071       <-- ..................................................
EY940007       --> CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCATACCAGAGAGCTC
EY933707       --> CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCTTACCAGAGAGCTC
EY939085       --> CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCATACCAGAGAGCTC
FD562109       --> CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCTTACCAGAGAGCTC
FD962206       --> CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCTTACCAGAGAGCTC
EW725198       --> CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCTTACCAGAGAGCTC
EX894804       --> CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCATACCAGAGAGCTC
EX896375       --> CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCATACCAGAGAGCTC
EY941277       --> CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCATACCAGAGGGCTC
EX771118       --> CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCTTACCAGAGAGCTC
EX894290       --> CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCTTACCAGAGAGCTC
EY939267       --> CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCTTACCAGAGAGCTC
FD964390       --> CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCTTACCAGAGAGCTC
EV539068       --> CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCTTACCAGAGAGCTC
EV549180       --> CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCTTACCAGAGAGCTC
EX896142       --> CTGGTCTCACAAGAACCCTATCCTCCCTTCTGATCCATACCAGAGAGCTC
EV535144       --> ..................................................
EY930307       --> ..................................................

               351    -    401
UN23517        --> AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGAGGCACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY935843       <-- AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGAGGCACAG  Raphanus sativus cv Early Scarlet Globe
EW729792       <-- AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGAGGCACAG  Raphanus sativus cv Early Scarlet Globe
EY935236       <-- AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGAGGCACAG  Raphanus sativus cv Early Scarlet Globe
EY926659       <-- AGGCTAGGTTCTGGGTTGATTTCATTGACAAGAAGATGTACGAGGCACAG  Raphanus sativus var. oleiformis
EX898634       <-- AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGAGGCACAG  Raphanus sativus cv Early Scarlet Globe
FD958800       <-- AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGAGGCACAG  Raphanus raphanistrum subsp. maritimus
EV541382       <-- AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGATGCACAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566094       <-- AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGAGGCACAG  Raphanus sativus var. oleiformis
FD969576       <-- AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGATGCACAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974410       <-- AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGATGCACAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900315       <-- AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGAGGCACAG  Raphanus sativus cv Early Scarlet Globe
EY929113       <-- AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGAGGCACAG  Raphanus sativus var. oleiformis
FD960407       <-- AGGCTAGGTTCTGGGTTGATTTCATTGACAAGAAGATGTACGAGGCACAG  Raphanus raphanistrum subsp. maritimus
FD531577       <-- AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGAGGCACAG  Raphanus raphanistrum subsp. maritimus
EY936892       <-- AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGAGGCACAG  Raphanus sativus cv Early Scarlet Globe
EY936919       <-- AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGAGGCACAG  Raphanus sativus cv Early Scarlet Globe
EY935093       <-- AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGAGGCACAG  Raphanus sativus cv Early Scarlet Globe
FD538775       <-- AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGATGCACAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969466       <-- AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGATGCACAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542946       <-- AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGATGCACAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900114       <-- AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGAGGCACAG  Raphanus sativus cv Early Scarlet Globe
EV544708       <-- .....AGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGATGCACAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899071       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY940007       --> AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGAGGCACAG  Raphanus sativus cv Early Scarlet Globe
EY933707       --> AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGAGGCACAG  Raphanus sativus var. oleiformis
EY939085       --> AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGAGGCACAG  Raphanus sativus cv Early Scarlet Globe
FD562109       --> AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGAGGCACAG  Raphanus sativus var. oleiformis
FD962206       --> AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGAGGCACAG  Raphanus raphanistrum subsp. maritimus
EW725198       --> AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGAGGCACAG  Raphanus sativus cv Early Scarlet Globe
EX894804       --> AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGAGGCACAG  Raphanus sativus cv Early Scarlet Globe
EX896375       --> AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGAGGCACAG  Raphanus sativus cv Early Scarlet Globe
EY941277       --> AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGAGGCACAG  Raphanus sativus cv Early Scarlet Globe
EX771118       --> AGGCTAGGTTCTGGGTTGATTTCATTGACAAGAAGATGTACGAGGCACAG  Raphanus raphanistrum subsp. landra
EX894290       --> AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGAGGCACAG  Raphanus sativus cv Early Scarlet Globe
EY939267       --> AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGAGGCACAG  Raphanus sativus cv Early Scarlet Globe
FD964390       --> AGGCTAGGTTCTGGGTTGATTTCATTGACAAGAAGATGTACGAGGCACAG  Raphanus raphanistrum subsp. maritimus
EV539068       --> AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGATGCACAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549180       --> AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGATGCACAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896142       --> AGGCTAGGTTCTGGGTTGATTTCATCGACAAGAAGATGTACGAGGCACAG  Raphanus sativus cv Early Scarlet Globe
EV535144       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930307       --> ..................................................  Raphanus sativus var. oleiformis

               401    -    451
UN23517        --> AGGAAGGTGTATGCTTCCAAGGGTGAGGAACAAGAGGCAGGCAAGAAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY935843       <-- AGGAAGGTGTATGCTTCCAAGGGTGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus sativus cv Early Scarlet Globe
EW729792       <-- AGGAAGGTGTATGCTTCCAAGGGTGAGGAACAAGAGGTAGGCAAGAAGGA  Raphanus sativus cv Early Scarlet Globe
EY935236       <-- AGGAAGGTGTATGCTTCCAAGGGCGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus sativus cv Early Scarlet Globe
EY926659       <-- AGGAAGGTGTATGCTTCCAAGGGTGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus sativus var. oleiformis
EX898634       <-- AGGAAGGTGTATGCTTCCAAGGGCGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus sativus cv Early Scarlet Globe
FD958800       <-- AGGAAGGTGTATGCTTCCAAGGGCGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus raphanistrum subsp. maritimus
EV541382       <-- AGGAAGGTGTATGCTTCCAAGGGTGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566094       <-- AGGAAGGTGTATGCTTCCAAGAGTGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus sativus var. oleiformis
FD969576       <-- AGGAAGGTGTATGCTTCCAAGGGTGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974410       <-- AGGAAGGTGTATGCTTCCAAGGGTGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900315       <-- AGGAAGGTGTATACTTCCAAGGGTGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus sativus cv Early Scarlet Globe
EY929113       <-- AGGAAGGTGTATGCTTCCAAGAGCGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus sativus var. oleiformis
FD960407       <-- AGGAAGGTGTATGCTTCCAAGGGCGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus raphanistrum subsp. maritimus
FD531577       <-- AGGAAGGTGTATGCTTCCAAGGGCGAGGAACAAGAGGCAGGTAAGAAGGA  Raphanus raphanistrum subsp. maritimus
EY936892       <-- AGGAAGGCGTATGCTTCCAAGGGTGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus sativus cv Early Scarlet Globe
EY936919       <-- AGGAAGGTGTATGCTTCCAAGGGTGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus sativus cv Early Scarlet Globe
EY935093       <-- AGGAAGGTGTATGCTTCCAAGGGTGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus sativus cv Early Scarlet Globe
FD538775       <-- AGGAAGGTGTATGCTTCCAAGGGTGAGGAACAAGAGACAGGCAAGAAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969466       <-- AGGAAGGTGTATGCTTCCAAGGGTGTGGAACAAGAGGCAGGCAAGAAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542946       <-- AGGAAGGTGTATGCTTCCAAGGGTGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900114       <-- AGGAAGGTGTATGCTTCCAAGGGTGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus sativus cv Early Scarlet Globe
EV544708       <-- AGGAAGGTGTATGCTTCCAAGGGTGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899071       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY940007       --> AGGAAGGTGTATGCTTCCAAGGGTGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus sativus cv Early Scarlet Globe
EY933707       --> AGGAAGGTGTATGCTTCCAAGAGCGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus sativus var. oleiformis
EY939085       --> AGGAAGGTGTATGCTTCCAAGGGTGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus sativus cv Early Scarlet Globe
FD562109       --> AGGAAGGTGTATGCTTCCAAGAGTGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus sativus var. oleiformis
FD962206       --> AGGAAGGTGTATGCTTCCAAGGGCGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus raphanistrum subsp. maritimus
EW725198       --> AGGAAGGTGTATGCTTCCAAGGGTGAGGAACAAGAGGTAGGCAAGAAGGA  Raphanus sativus cv Early Scarlet Globe
EX894804       --> AGGAAGGTGTATACTTCCAAGGGTGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus sativus cv Early Scarlet Globe
EX896375       --> AGGAAGGTGTATACTTCCAAGGGTGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus sativus cv Early Scarlet Globe
EY941277       --> AGGAAGGCGTATGCTTCCAAGGGTGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus sativus cv Early Scarlet Globe
EX771118       --> AGGAAGGTGTATGCTTCCAAGGGCGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus raphanistrum subsp. landra
EX894290       --> AGGAAGGGGTATGCTTCCAAGGGCGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus sativus cv Early Scarlet Globe
EY939267       --> AGGAAGGTGTATGCTTCCAAGGGCGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus sativus cv Early Scarlet Globe
FD964390       --> AGGAAGGTGTATGCTTCCAAGGGCGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus raphanistrum subsp. maritimus
EV539068       --> AGGAAGGTGTATGCTTCCAAGGGTGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549180       --> AGGAAGGTGTATGCTTCCAAGGGTGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896142       --> AGGAAGGTGTATGCTTCCAAGGGTGAGGAACAAGAGGCAGGCAAGAAGGA  Raphanus sativus cv Early Scarlet Globe
EV535144       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930307       --> ..................................................  Raphanus sativus var. oleiformis

               451    -    501
UN23517        --> GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY935843       <-- GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
EW729792       <-- GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
EY935236       <-- GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
EY926659       <-- GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
EX898634       <-- GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
FD958800       <-- GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
EV541382       <-- GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
FD566094       <-- GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTCGGAGACAAGCCTT
FD969576       <-- GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
FD974410       <-- GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
EX900315       <-- GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
EY929113       <-- GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTCGGAGACAAGCCTT
FD960407       <-- GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
FD531577       <-- GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
EY936892       <-- GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
EY936919       <-- GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
EY935093       <-- GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
FD538775       <-- GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
FD969466       <-- GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
EV542946       <-- GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
EX900114       <-- GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
EV544708       <-- GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
EX899071       <-- ..................................................
EY940007       --> GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
EY933707       --> GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTCGGAGACAAGCCTT
EY939085       --> GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
FD562109       --> GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTCGGAGACAAGCCTT
FD962206       --> GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
EW725198       --> GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
EX894804       --> GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
EX896375       --> GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
EY941277       --> GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
EX771118       --> GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
EX894290       --> GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
EY939267       --> GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
FD964390       --> GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
EV539068       --> GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
EV549180       --> GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
EX896142       --> GTTCATTGAGATACTCAAGACTCTTGAATCCGAGCTTGGAGACAAGCCTT
EV535144       --> ..................................................
EY930307       --> ..................................................

               501    -    551
UN23517        --> ACTTTGGTGGGGATGACTTTGGCTATGTGGACATTGGATTGATTGGATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY935843       <-- ACTTTGGTGGGGATGATTTTGGCTATGTGGACATTGGATTGATTGGATTC  Raphanus sativus cv Early Scarlet Globe
EW729792       <-- ACTTTGGTGGGGATGATTTTGGCTATGTGGACATTGGATTGATTGGATTC  Raphanus sativus cv Early Scarlet Globe
EY935236       <-- ACTTTGGTGGGGATGACTTTGGCTATGTGGACATTGGATTGATTGGATTC  Raphanus sativus cv Early Scarlet Globe
EY926659       <-- ACTTTGGTGGGGATGACTTCGGCTATGTGGACATTGGATTGATTGGATTC  Raphanus sativus var. oleiformis
EX898634       <-- ACTTTGGTGGGGATGACTTTGGCTATGTGGACATTGGATTGATTGGATTC  Raphanus sativus cv Early Scarlet Globe
FD958800       <-- ACTTTGGTGGGGATGACTTTGGCTATGTGGACATTGGATTGATTGGATTC  Raphanus raphanistrum subsp. maritimus
EV541382       <-- ACTTTGGTGGGGATGACTTTGGCTACGTAGACATTGGACTGATTGGATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566094       <-- ACTTTGGTGGGGATGACTTTGGCTACGTGGACATTGGATTGATTGGATTC  Raphanus sativus var. oleiformis
FD969576       <-- ACTTTGGTGGGGATGACTTTGGCTACGTAGACATTGGACTGATTGGATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974410       <-- ACTTTGGTGGGGATGACTTTGGCTACGTAGACATTGGACTGATTGGATTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900315       <-- ACTTTGGTGGGGATGATTTTGGCTATGTGGACATTGGATTGATTGGATTC  Raphanus sativus cv Early Scarlet Globe
EY929113       <-- ACTTTGGTGGGGATGACTTTGGCTACGTGGACATTGGATTGATTGGATTC  Raphanus sativus var. oleiformis
FD960407       <-- ACTTTGGTGGGGATGACTTTGGCTACGTAGACATTGGACTGATTGGATTC  Raphanus raphanistrum subsp. maritimus
FD531577       <-- ACTTTGGTGGGGATGACTTTGGCTATGTGGACATTGGATTGATTGGATTC  Raphanus raphanistrum subsp. maritimus
EY936892       <-- ACTTTGGTGGGGATGATTTTGGCTATGTGGACATTGGATTGATTGGATTC  Raphanus sativus cv Early Scarlet Globe
EY936919       <-- ACTTTGGTGGGGATGATTTTGGCTATGTGGACATTGGATTGATTGGATTC  Raphanus sativus cv Early Scarlet Globe
EY935093       <-- ACTTTGGTGGGAATGGTTTTGGCTATGTGGACATTGGATTGATTGGATTC  Raphanus sativus cv Early Scarlet Globe
FD538775       <-- ACTTTGGTGGGGATGACTTTGGCTACGTAGACATTGGATTGATTGGATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969466       <-- ACTTTGGTGGGGATGACTTTGGCTACGTAGACATTGGACTGATTGGATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542946       <-- ACTTTGGTGGGGATGACTTTGGCTACGTAGACATTGGACTGATTGGATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900114       <-- ACTTTGGTGGGGATGATTTTGGCTATGTGGACATTGGATTGATTGGATTC  Raphanus sativus cv Early Scarlet Globe
EV544708       <-- ACTTTGGTGGGGATGACTTTGGCTACGTAGACATTGGACTGATTGGATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899071       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY940007       --> ACTTTGGTGGGGATGATTTTGGCTATGTGGACATTGGATTGATTGGATTC  Raphanus sativus cv Early Scarlet Globe
EY933707       --> ACTTTGGTGGGGATGACTTTGGCTACGTGGACATTGGATTGATTGGATTC  Raphanus sativus var. oleiformis
EY939085       --> ACTTTGGTGGGAATGGTTTTGGCTATGTGGACATTGGATTGATTGGATTC  Raphanus sativus cv Early Scarlet Globe
FD562109       --> ACTTTGGTGGGGATGACTTTGGCTACGTGGACATTGGATTGATTGGATTC  Raphanus sativus var. oleiformis
FD962206       --> ACTTTGGTGGGGATGACTTTGGCTATGTGGACATTGGATTGATTGGATTC  Raphanus raphanistrum subsp. maritimus
EW725198       --> ACTTTGGTGGGGATGATTTTGGCTATGTGGACATTGGATTGATTGGATTC  Raphanus sativus cv Early Scarlet Globe
EX894804       --> ACTTTGGTGGGGATGATTTTGGCTATGTGGACATTGGATTGATTGGATTC  Raphanus sativus cv Early Scarlet Globe
EX896375       --> ACTTTGGTGGGGATGATTTTGGCTATGTGGACATTGGATTGATTGGATTC  Raphanus sativus cv Early Scarlet Globe
EY941277       --> ACTTTGGTGGGGATGATTTTGGCTATGTGGACATTGGATTGATTGGATTC  Raphanus sativus cv Early Scarlet Globe
EX771118       --> ACTTTGGTGGG-ATGACTTTGGCTACGTAGACATTGGACTGATTGGATTC  Raphanus raphanistrum subsp. landra
EX894290       --> ACTTTGGTGGGGATGACTTTGGCTATGTGGACATTGGATTGATTGGATTC  Raphanus sativus cv Early Scarlet Globe
EY939267       --> ACTTTGGTGGGGATGACTTTGGCTATGTGGACATTGGATTGATTGGATTC  Raphanus sativus cv Early Scarlet Globe
FD964390       --> ACTTTGGTGGGGATGACTTTGGCTACGTAGACATTGGACTGATTGGATTC  Raphanus raphanistrum subsp. maritimus
EV539068       --> ACTTTGGTGGGGATGACTTTGGCTACGTAGACATTGGACTGATTGGATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549180       --> ACTTTGGTGGGGATGACTTTGGCTACGTAGACATTGGACTGATTGGATTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896142       --> ACTTTGGTGGGGATGATTTTGGCTATGTGGACATTGGATTGATTGGATTC  Raphanus sativus cv Early Scarlet Globe
EV535144       --> ..................................gGGACTGATTGGATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930307       --> ..................................................  Raphanus sativus var. oleiformis

               551    -    601
UN23517        --> TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY935843       <-- TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
EW729792       <-- TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
EY935236       <-- TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
EY926659       <-- TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
EX898634       <-- TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
FD958800       <-- TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
EV541382       <-- TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
FD566094       <-- TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
FD969576       <-- TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
FD974410       <-- TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
EX900315       <-- TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
EY929113       <-- TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
FD960407       <-- TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
FD531577       <-- TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
EY936892       <-- TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
EY936919       <-- TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
EY935093       <-- TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
FD538775       <-- TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
FD969466       <-- TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
EV542946       <-- TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
EX900114       <-- TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
EV544708       <-- TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
EX899071       <-- ..................................................
EY940007       --> TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
EY933707       --> TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
EY939085       --> TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
FD562109       --> TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
FD962206       --> TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
EW725198       --> TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
EX894804       --> TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
EX896375       --> TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
EY941277       --> TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAG.
EX771118       --> TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
EX894290       --> TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
EY939267       --> TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
FD964390       --> TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
EV539068       --> TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
EV549180       --> TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
EX896142       --> TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
EV535144       --> TACTCCTGGTTCCCTGGGTATGAGAAGTTTGGTAACCTCAACTTCGAAGC
EY930307       --> ..................................................

               601    -    651
UN23517        --> AGAGTGTCCGAAACTTATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY935843       <-- AGAGTGTCCGAAACTTATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus sativus cv Early Scarlet Globe
EW729792       <-- AGAGTGTCCGAAACTTATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus sativus cv Early Scarlet Globe
EY935236       <-- AGAGTGTCCGAAACTGATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus sativus cv Early Scarlet Globe
EY926659       <-- AGAGTGTCCGAAACTGATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus sativus var. oleiformis
EX898634       <-- AGAGTGTCCGAAACTGATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus sativus cv Early Scarlet Globe
FD958800       <-- AGAGTGTCCGAAACTGATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus raphanistrum subsp. maritimus
EV541382       <-- AGAGTGTCCGAAACTTATTACTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566094       <-- AGAGTGTCCGAAGCTTATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus sativus var. oleiformis
FD969576       <-- AGAGTGTCCGAAACTTATTACTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974410       <-- AGAGTGTCCGAAACTTATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900315       <-- AGAGTGTCCGAAACTTATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus sativus cv Early Scarlet Globe
EY929113       <-- AGAGTGTCCGAAGCTTATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus sativus var. oleiformis
FD960407       <-- AGAGTGTCCGAAACTGATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus raphanistrum subsp. maritimus
FD531577       <-- AGAGTGTCCGAAACTGATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus raphanistrum subsp. maritimus
EY936892       <-- AGAGTGTCCGAAACTTATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus sativus cv Early Scarlet Globe
EY936919       <-- AGAGTGTCCGAAACTTATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus sativus cv Early Scarlet Globe
EY935093       <-- AGAGTGTCCGAAACTTATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus sativus cv Early Scarlet Globe
FD538775       <-- AGAGTGTCCGAAACTTATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969466       <-- AGAGTGTCCGAAACTTATTGCTTGGGCCAAGAGGTGTATGCAGAGGGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542946       <-- AGAGTGTCCGAAACTTATTGCTTGGGCCAAGAGGTGTATGCAGAGGGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900114       <-- AGAGTGTCCGAAACTTATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus sativus cv Early Scarlet Globe
EV544708       <-- AGAGTGTCCGAAACTTATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899071       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY940007       --> AGAGTGTCCGAAACTTATTGCTTGGGCTAAGAG-TGTATGCAGAGGGAGA  Raphanus sativus cv Early Scarlet Globe
EY933707       --> AGAGTGTCCGAAGCTTATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus sativus var. oleiformis
EY939085       --> AGAGTGTCCGAAACTTATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus sativus cv Early Scarlet Globe
FD562109       --> AGAGTGTCCGAAGCTTATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus sativus var. oleiformis
FD962206       --> AGAGTGTCCGAAACTGATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus raphanistrum subsp. maritimus
EW725198       --> AGAGTGTCCGAAACTTATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus sativus cv Early Scarlet Globe
EX894804       --> AGAGTGTCCGAAACTTATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus sativus cv Early Scarlet Globe
EX896375       --> AGAGTGTCCGAAACTTATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus sativus cv Early Scarlet Globe
EY941277       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX771118       --> AGAGTGTCCGAAACTGATTGCTTGGGCTAAGAG-TGTATGCAGAGGGAGA  Raphanus raphanistrum subsp. landra
EX894290       --> AGAGTGTCCGAAACTGATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus sativus cv Early Scarlet Globe
EY939267       --> AGAGTGTCCGAAACTGATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus sativus cv Early Scarlet Globe
FD964390       --> AGAGTGTCCGAAACTGATTGCTTGGGCTAAGAGGTGTA............  Raphanus raphanistrum subsp. maritimus
EV539068       --> AGAGTGTCCGAAACTTATTGCTTGGGCCAAGAGGTGTATGCAGAGGGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549180       --> AGAGTGTCCGAAACTTATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896142       --> AGAGTGTCCGAAACTTATTGCTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus sativus cv Early Scarlet Globe
EV535144       --> AAAGTGTCCGAAACTTATTACTTGGGCTAAGAGGTGTATGCAGAGGGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930307       --> ..................................................  Raphanus sativus var. oleiformis

               651    -    701
UN23517        --> GTGTGGCCAAGTCCTTGCCTGATTTTGAGAAGGTTACTGAGTTTATGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY935843       <-- GTGTGGCCAAGTCCTTGCCTGATTTTGAGAAGGTTACTGAGTTTATGGGT  Raphanus sativus cv Early Scarlet Globe
EW729792       <-- GTGTGGCCAAGTCCTTGCCTGATTTTGAGAAGGTTACTGAGTTCATGGGT  Raphanus sativus cv Early Scarlet Globe
EY935236       <-- GTGTGGCCAAGTCCTTGCCTGATTTTGAGAAGGTTACTGAGTTTATGGGT  Raphanus sativus cv Early Scarlet Globe
EY926659       <-- GTGTGGCCAAGTCCTTGCCTGATTTTGAGAAGGTTACTGAGTTTATGGGT  Raphanus sativus var. oleiformis
EX898634       <-- GTGTGGCCAAGTCCTTGCCTGATTTTGAGAAGGTTACTGAGTTTATGGGT  Raphanus sativus cv Early Scarlet Globe
FD958800       <-- GTGTGGCCAAGTCCTTGCCTGATTTTGAGAAGGTTACTGAGTTTATGGGT  Raphanus raphanistrum subsp. maritimus
EV541382       <-- GTGTGGCCAAGTCCTTGCCTGATTTTGAGAAGGTTACTGAGTTTATGGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566094       <-- GTGTGGCCAAGTCCTTACCTGATTTTGAGAAGGTTACTGAGTTTATGGGT  Raphanus sativus var. oleiformis
FD969576       <-- GTGTGGCCAAGTCCTTGCCTGATTTTGAGAAGGTTACTGAGTTTATGGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974410       <-- GTGTGACCAAGTCCCTGCCTGATTTTGAGAAGGTTACTGAGTTCATGGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900315       <-- GTGTGGCCAAGTCCTTGCCTGATTTTGAGAAGGTTACTGAGTTTATGGGT  Raphanus sativus cv Early Scarlet Globe
EY929113       <-- GTGTGGCCAAGTCCTTGCCTGATTTTGAGAAGGTTACTGAGTTTATGGGT  Raphanus sativus var. oleiformis
FD960407       <-- GTGTGGCCAAGTCCTTGCCTGATTTTGAGAAGGTTACTGAGTTTATGGGT  Raphanus raphanistrum subsp. maritimus
FD531577       <-- GTGTGGCCAAGTCCTTGCCTGATTTTGAGAAGGTTACTGAGTTTATGGGT  Raphanus raphanistrum subsp. maritimus
EY936892       <-- GTGTGGCCAAGTCCTTGCCTGATTTTGAGAAGGTTACTGAGTTTATGGGT  Raphanus sativus cv Early Scarlet Globe
EY936919       <-- GTGTGGCCAAGTCCTTGCCTGATTTTGAGAAGGTTACTGAGTTCATGGGT  Raphanus sativus cv Early Scarlet Globe
EY935093       <-- GTGTGGCCAAGTCCTTGCCTGATTTT-TGAAGGTTACTGAGTTTATGGGT  Raphanus sativus cv Early Scarlet Globe
FD538775       <-- GTGTGGCCAAGTCCTTGCCTGATTTTGAGAAGGTTACTGAGTTCATGGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969466       <-- GTGTGGCCAAGTCCCTGCCTGATTTTGGGAAGGTTACTGAGTTCATGGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542946       <-- GTGTGGCCAAGTCCCTGCCTGATTTTGAGAAGGTTACTGAGTTCATGGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900114       <-- GTGTGGCCAAGTCCTTGCCTGATTTTGAGAAGGTTACTGAGTTTATGGGT  Raphanus sativus cv Early Scarlet Globe
EV544708       <-- GTGTGGCCAAGTCCCTGCCTGATTTTGAGAAGGTTACTGAGTTCATGGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899071       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY940007       --> GTGTGGCCAAGTCCTTGCCTGATTTTGAGAAGGT-ACTGAGTTTATGGGT  Raphanus sativus cv Early Scarlet Globe
EY933707       --> GTGTGGCCAAGTCCTTGCCTGATTTTGAGAAG-TTACTGAGTTTATGGGT  Raphanus sativus var. oleiformis
EY939085       --> GTGTGGCCAAGTCCTTGCCTGATTTT-TGAA-GTTACTGAGTTTATGGGT  Raphanus sativus cv Early Scarlet Globe
FD562109       --> GTGTGGCCAAGTCCTTACCTGATTTTGAGAAGGTTACTGAGTTTATGGGT  Raphanus sativus var. oleiformis
FD962206       --> GTGTGGCCAAGTCCTTGCCTGATTTTGA......................  Raphanus raphanistrum subsp. maritimus
EW725198       --> GTGTGGCCAAGTCCTTGCCTGATTTTGAGAAG-TTACTGAGTTCATGGGT  Raphanus sativus cv Early Scarlet Globe
EX894804       --> GTGTGGCCAAGTCCTTGCCTGATTTTGAGAAG-TTACTGAGTTTATGGGT  Raphanus sativus cv Early Scarlet Globe
EX896375       --> GTGTGGCCAAGTCCTTGCCTGATTTTGAGA-TGTTACTGAGTTTATGGGT  Raphanus sativus cv Early Scarlet Globe
EY941277       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX771118       --> GTGTGGCCAAGTCCTTGCCTGATTTTGAGA--GTTACTGAGTTTATGGGT  Raphanus raphanistrum subsp. landra
EX894290       --> GTGTGGCCAAGTCCTTGCCTGATTTTGAGAAG-TTACTGAGTTTATGGGT  Raphanus sativus cv Early Scarlet Globe
EY939267       --> GTGTGGCCAAGTCCTTGCCTGATTTTGAGAAG-TTACTGAGTTTATGGGT  Raphanus sativus cv Early Scarlet Globe
FD964390       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV539068       --> GTGTGGCCAAGTCCCTGCCTGATTTTGAGAAG-TTACTGAGTTCATGGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549180       --> GTGTGGCCAAGTCCCTGCCTGATTTTGAGAAAGTTACTGAGTTCATGGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896142       --> GTGTGGCCAAGTCCTTGCCTGATTTTGAGAAGGTTACTGAGTTTATGGGT  Raphanus sativus cv Early Scarlet Globe
EV535144       --> GTGTGGCCAAGTCCTTGCCTGATTTTGAGAAGGTTACTGAGTTTATGGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930307       --> ..................................................  Raphanus sativus var. oleiformis

               701    -    751
UN23517        --> ATGCTCAGGAAGAAGTTTGGGGTTGAGTAGATCCGTTTGTTTGTCG-TTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY935843       <-- ATGCTCAGGAAGAAGTTTGGGGTTGAGTAGATCCGTTTGTTTGTCG-TTT  Raphanus sativus cv Early Scarlet Globe
EW729792       <-- ATGCTCAGGAAGAAGTTTGGGGTTGAGTAGATCCGTTTGTTTGTCGCTTT  Raphanus sativus cv Early Scarlet Globe
EY935236       <-- ATGCTCAGGAAGAAGTTTGGGGTTGAGTAGATCCGTTTGTTTGTCG-TTT  Raphanus sativus cv Early Scarlet Globe
EY926659       <-- ATGCTCAGGAAGAAGTTTGGGGTTGAGTAGATCCGTTTGTTTGTCG-TTT  Raphanus sativus var. oleiformis
EX898634       <-- ATGCTCAGGAAGAAGTTTGGGGTTGAGTAGATCCGTTTGTTTGTCG-TTT  Raphanus sativus cv Early Scarlet Globe
FD958800       <-- ATGCTCAGGAAGAAGTTTGGGGTTGAGTAGATCCGTTTGTTTGTCG-TTT  Raphanus raphanistrum subsp. maritimus
EV541382       <-- ATGCTCAGGAAGAAGTTTGGGGTTGAGTAGATCCGTTTGTTTGTCGCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566094       <-- ATGCTCAGGAAGAAGTTTGGGGTTGAGTAGATCCGTTTGTTTGTCGCTTT  Raphanus sativus var. oleiformis
FD969576       <-- ATGCTCAGGAAGAAGTTTGGGGTTGAGTAGATCCGTTTGTTTGTCGCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974410       <-- ATGCTCAGGAAGAAATTTGGGGTTGAGTAGATCCGTTTGTTTGTCG-TTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900315       <-- ATGCTCAGGAAGAAGTTTGGGGTTGAGTATATCCGTTTGTTTGTCG-TTT  Raphanus sativus cv Early Scarlet Globe
EY929113       <-- ATGCTCGGGAAGAAGTTTGGGGTTGAGTAGATCCGTTTGTTTGTCGCTTT  Raphanus sativus var. oleiformis
FD960407       <-- ATGCTCAGGAAGAAGTTTGGGGTTGAGTAGATCCGTTTGTTTGTCG-TTT  Raphanus raphanistrum subsp. maritimus
FD531577       <-- ATGCTCAGGAAGAAGTTTGGGGTTGAGTAGATCCGTTTGTTTGTCG-TTT  Raphanus raphanistrum subsp. maritimus
EY936892       <-- ATGCTCAGGAAGAAGTTTGGGGTTGAGTAGATCCGTTTGTTTGTCG-TTT  Raphanus sativus cv Early Scarlet Globe
EY936919       <-- ATGCTCAGGAAGAAGTTTGGGGTTGAGTAGATCCGTTTGTTTGTCGCTTT  Raphanus sativus cv Early Scarlet Globe
EY935093       <-- ATGCTCAGGAAGAAGTTTGGGGGTGAGTAGATCCGTTTGTTTGTCG-TTT  Raphanus sativus cv Early Scarlet Globe
FD538775       <-- ATGCTCAGGAAGAAATTTGGGGTTGAGTAGATCCGTTTGTTTGTCG-TTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969466       <-- ATGCTCAGGAAGAAATTTGGGGTTGAGTAGATCCGTTTGTTTGTCG-TTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542946       <-- ATGCTCAGGAAGAAATTTGGGGTTGAG.......................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900114       <-- ATGCTCAGGAAGAAGTTTGGGGTTGAGTAGATCCGTTTGTTTGTCG-TTT  Raphanus sativus cv Early Scarlet Globe
EV544708       <-- ATGCTCAGGAAGAAATTTGGGGTTGAGTAGATCCGTTTGTTTGTCG-TTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899071       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY940007       --> ATGCT.............................................  Raphanus sativus cv Early Scarlet Globe
EY933707       --> ATGCTCGGGAga......................................  Raphanus sativus var. oleiformis
EY939085       --> ATGC..............................................  Raphanus sativus cv Early Scarlet Globe
FD562109       --> ATGCTCAG-AAGAAGTTTGGGGTTGAGTAGATCCGTTTGTTTGTCGCTTT  Raphanus sativus var. oleiformis
FD962206       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW725198       --> ATGCTCAG-AAGAAGTTTGGGGTTGAGTAGATCCGTT-G-TTGTCG-CTT  Raphanus sativus cv Early Scarlet Globe
EX894804       --> ATGC..............................................  Raphanus sativus cv Early Scarlet Globe
EX896375       --> AT................................................  Raphanus sativus cv Early Scarlet Globe
EY941277       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX771118       --> ..................................................  Raphanus raphanistrum subsp. landra
EX894290       --> ATGCTCAG-AAGAAGTTTGGGGTTGAGTAGATCCGTTTGTTTGTCG-TT-  Raphanus sativus cv Early Scarlet Globe
EY939267       --> ATGCTCAG..........................................  Raphanus sativus cv Early Scarlet Globe
FD964390       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV539068       --> ATGCTCAG-AAGAAATTTGGGGTTGAGTAGATCCGTTTGTTTGTCG-TTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549180       --> ATGCT.............................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896142       --> ATGCTCAGGAAGAAGTTTGGGGTTGAGTAGATCCGTTTGTTTGTCG-TTT  Raphanus sativus cv Early Scarlet Globe
EV535144       --> ATGCTCAGGAAGAAGTTTGGGGTTGAGTAGATCCGTTTGTTTGTCGCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930307       --> .........................................gGTCG-TTT  Raphanus sativus var. oleiformis

               751    -    801
UN23517        --> GGTTCCTATCTATGTTCAGTTGTGTTCTGTTTTACTTTAGTTTGATGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY935843       <-- GGTTCCTATCTATGTTCAGTTGTGTTCTGTTTTACTTTAGTTTGATGATC  Raphanus sativus cv Early Scarlet Globe
EW729792       <-- GGTTCCTATCTATGTTCAGTTGTGTTCTGTTTTACTTTAGTTTGATGATC  Raphanus sativus cv Early Scarlet Globe
EY935236       <-- GGT-CCTATCTATGTTCAGTTTCGCTCTGTTTTACTTTAGTTTGATGATC  Raphanus sativus cv Early Scarlet Globe
EY926659       <-- GGTTCCTATCTATGTTCAGTTTCGTTCTGTTTTACTTTAGTTTGATGATC  Raphanus sativus var. oleiformis
EX898634       <-- GGTTCCTATCTATGTTCAGTTTCGTTCTGTTTTACTTTAGTTTGATGATC  Raphanus sativus cv Early Scarlet Globe
FD958800       <-- GGTTCCTATCTATGTTCAGTTTCGTTCTGTTTTACTTTAGTTTGATGATC  Raphanus raphanistrum subsp. maritimus
EV541382       <-- GGTTCCTATCTATGTTCAGTTGTGTTCTATTTTACTTTAGTTTGATGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566094       <-- GGTTCCTATCTATGTTCAGTTGTGTTCTGTTTTACTTTAGTTTGATGATC  Raphanus sativus var. oleiformis
FD969576       <-- GGTTCCTATCTATGTTCAGTTGTGTTCTATTTTACTTTAGTTTGATGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974410       <-- GGTTCCTATCTATGTTCAGTTGTGTTCTGTTTTACTTTGGTTTGATGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900315       <-- GGTTCCTATCTATGTTCAGTTGTGTTCTGTTTTACTTTAGTTTGATGATC  Raphanus sativus cv Early Scarlet Globe
EY929113       <-- GGTTCCTACCTATGTTCAGTTGTGTTCTGTTTTACTTTAGTTTGATGATC  Raphanus sativus var. oleiformis
FD960407       <-- GGTTCCTATCTATATTCAGTTTCGTTCTGTTTTACTTTAGTTTGATGATC  Raphanus raphanistrum subsp. maritimus
FD531577       <-- GGTTCCTATCTATGTTCAGTTTCGTTCTGTTTTACTTTAGTTTGATGATC  Raphanus raphanistrum subsp. maritimus
EY936892       <-- GGTTCCTATCTATGTTCAGTTGTGTTCTGTTTTACTTTAGTTTGATGATC  Raphanus sativus cv Early Scarlet Globe
EY936919       <-- GGTTCCTATCTATGTTCAGTTGTGTTCTGTTTTACTTTAGTTTGATGATC  Raphanus sativus cv Early Scarlet Globe
EY935093       <-- GGTTCCTATCTATGTTCAGTTGTGTTCTGTTTTACTTTAGTTTGATGATC  Raphanus sativus cv Early Scarlet Globe
FD538775       <-- GGTTCCTATCTATGTTCAGTTGTGTTCTGTTTTACTTTGGTTTGATGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969466       <-- GGTTCCTATCTATGTTCAGTTGTGTTCTGTTTTACTTTAGTTTGATGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542946       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900114       <-- GGTTCCTATCTATGTTCAGTTGTGTTCTGTTTTACTTTAGTTTGATGATC  Raphanus sativus cv Early Scarlet Globe
EV544708       <-- GGTTCCTATCTATGTTCAGTTGTGTTCTGTTTTACTTTGGTTTGATGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899071       <-- ...........ATGTTCAGTTGTGTTCTGTTTTACTTTAGTTTGATGATC  Raphanus sativus cv Early Scarlet Globe
EY940007       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY933707       --> ..................................................  Raphanus sativus var. oleiformis
EY939085       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD562109       --> GGT...............................................  Raphanus sativus var. oleiformis
FD962206       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW725198       --> TGTTC-TATCTATGTTCAGTTGTGTTCTGTTT-ACTTTAGTTTGATGATC  Raphanus sativus cv Early Scarlet Globe
EX894804       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX896375       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941277       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX771118       --> ..................................................  Raphanus raphanistrum subsp. landra
EX894290       --> GG-TCCTATCTATGTTCAGTTtcgtttgtt....................  Raphanus sativus cv Early Scarlet Globe
EY939267       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD964390       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV539068       --> GGTTCCTATCTATGTTCA................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549180       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896142       --> GGTTCCTATCTATGTTCAGTTGTGTTCTGTTTTACTTTAGTTTGATGATC  Raphanus sativus cv Early Scarlet Globe
EV535144       --> GGTTCCTATCTATGCTCAGTTGTGTTCTATTTTACTTTAGTTTGATGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930307       --> GGTTCCTATCTATGTTCAGTTTCGTTCTGTTTTACTTTAGTTTGATGATC  Raphanus sativus var. oleiformis

               801    -    851
UN23517        --> ATGTCTTCTTAAATAATGCC-AGAGCTATGGATGATGGATGTGGAGAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY935843       <-- ATGTCTTCTT........................................
EW729792       <-- ATGTCTTCTTAAATAATGCC-AGAGCTATGGATGATGGATGTGGAGAGGA
EY935236       <-- ATGTCTTCTTAAATAATGCC-AGAGCTATGGATGATGGATACGGAGAGAA
EY926659       <-- ATGTCTTCTTAAATAATGCCCAGAGCTATGGATGATGGATGTGGAGAGAA
EX898634       <-- ATGTCTTCTTAAATAATGCC-AGAGCTATGGATGATGGATGCGGAGAGAA
FD958800       <-- ATGTCTTCTTAAATAATGCC-AGAGCTATGGATGATGGATGTGGAGAGAA
EV541382       <-- ATGTCTTCTTAAATAATGCC-AGAGCTATGGATGATGGATGTGGAGAGAA
FD566094       <-- ATGTCTTCTTAAATAATGCC-AGAGCTATGGATGATGGATGTGGAGAGAA
FD969576       <-- ATGTCTTCTTAAATAATGCC-AGAGCTATGGATGATGGATGTGGAGAGAA
FD974410       <-- ATGTCTTCTTAAATAATGCC-AGAGCTATGGATGATGGATGTGGAGAGAA
EX900315       <-- ATGTCTTCTTAAATAATGCC-AGAGCTATGGATGATGGATGTGGAGAGAA
EY929113       <-- ATGTCTTCTTAAATAATGCC-AGAGCTATGGATGATGGATGTGGAGAGAA
FD960407       <-- ATGTCTTCTTAAATAATGCCCAGAGCTATGGATGATGGATGTGGAGAGAA
FD531577       <-- ATGTCTTCTTAAATAATGCC-AGAGCTATGGAT.................
EY936892       <-- ATGTCTTCTTAAATAATGCC-AGAGCTATGGATGATGGATGTGGAGAGAA
EY936919       <-- ATGTCTTCTTAAATAATGCC-AGAGCTATGGATGATGGATGTGGAGAGAA
EY935093       <-- ATGTCTTCTTAAATAATGCC-AGAGCTATGGATGATGGATGTGGAGAGAA
FD538775       <-- ATGTCTTCTTAAATAATGCC-AGAGCTATGGATGATGGATGTGGAGAGAA
FD969466       <-- ATGTCTTCTTAAATAATGCC-AGAGATATGGATGATGGATGTGGAGAGAA
EV542946       <-- ..................................................
EX900114       <-- ATGTCTTCTTAAATAATGCC-AGAGCTATGGATGATGGATGTGGAGAGAA
EV544708       <-- ATGTCTTCTTAAATAATGCC-AGAGCTATGGATGATGGATGTGGAGAGAA
EX899071       <-- ATGTCTTCTTAAATAATGCC-AGAGCTATGGATGATGGATGTGGAGAGAA
EY940007       --> ..................................................
EY933707       --> ..................................................
EY939085       --> ..................................................
FD562109       --> ..................................................
FD962206       --> ..................................................
EW725198       --> ATGTCT............................................
EX894804       --> ..................................................
EX896375       --> ..................................................
EY941277       --> ..................................................
EX771118       --> ..................................................
EX894290       --> ..................................................
EY939267       --> ..................................................
FD964390       --> ..................................................
EV539068       --> ..................................................
EV549180       --> ..................................................
EX896142       --> ATGTCTTCTTAAATAATGCC-AGAGCTATGGATGATGGATGTGGAGAGAA
EV535144       --> ATGTCTTCTTAAATAATGCC-AGAGCTATGGATGATGGATGTGGAGAGAA
EY930307       --> ATGTCTTCTTAAATAATGCCCAGAGCTATGGATGATGGATGTGGAGAGAA

               851    -    901
UN23517        --> TTGTATGTTCTTGTTTGTATGCATCTTAAGCGTGGAATAAATGATGTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY935843       <-- ..................................................
EW729792       <-- TTGTATGTTCTTGTTTGTATGCATCTTAAGCGTGGAATAAATGATGTTTT
EY935236       <-- TTGTATGTTCTTGTTTGTATGCATCTTAAGCGTGGAATAAATGATGTTTT
EY926659       <-- TTGTATGTTCTTGTTTGTTTGCATCTTAAGCGTGGAATAAATGATGTTTT
EX898634       <-- TTGTATGTTCTTGTTTGTATGCATCTTAAGCGTGGAATAAATGATGTTTT
FD958800       <-- TTGTATGTTCTTGTTTGTATGCATCTTAAGCGTGGAATAAATGATGTTTT
EV541382       <-- TTGTATGTTCTTGTTTGTATGCATCTTAAACGTGGAA.............
FD566094       <-- TTGTATGTTCTTGTTTGTATGCATCTTAAGCGTGGAATAAATGATGTTTT
FD969576       <-- TTGTATGTTCTTGTTTGTATGCATCCTAAACGTGGAATAAATGATGTTTT
FD974410       <-- TTGTATGTTCTTGTTTGTATGCATCTTAAGCGTGGAATAAATTATGTTTT
EX900315       <-- TTGTATGTTCTTGTTTGTATGCATCTTAAGCGCGGAATAAATGATGTTTT
EY929113       <-- TTGTATGTTCTTGTTTGTATGCATCTTAAGCGTGGAATAAATGATGTTTT
FD960407       <-- TTGTATGTTCTTGTTTGTTTGCATCTTAAGCGTGGAATAAATGATGTTTT
FD531577       <-- ..................................................
EY936892       <-- TTGTATGTTCTTGTTTGTATGCATCTTAAGCGTGGAATAAATGATGTTTT
EY936919       <-- TTGTATGTTCTTGTTTGTATGCATCTTAAGCGTGGAATAAATGATGTTTT
EY935093       <-- TTGTATGTTCTTGTTTGTATGCATCTTAAGCGTGGAATAAATGATGTTTT
FD538775       <-- TTGTATGTTCTTGTTTGTATGCATCTTAAGCGTGGAATAAATTATGTTTT
FD969466       <-- TTGTATGTTCTTGTTTGTATGCATCTTAAGCGTGGAATAAATGATGTTTT
EV542946       <-- ..................................................
EX900114       <-- TTGTATGTTCTTGTTTGTATGCATCTTAAGCGTGGAATAAATGATGTTTT
EV544708       <-- TTGTATGTTCTTGTTTGTATGCATCTTAAGCGTGGAATAAATTATGTTTT
EX899071       <-- TTGTATGTTCTTGTTTGTATGCATCTTAAGCGCGGAATAAATGATGTTTT
EY940007       --> ..................................................
EY933707       --> ..................................................
EY939085       --> ..................................................
FD562109       --> ..................................................
FD962206       --> ..................................................
EW725198       --> ..................................................
EX894804       --> ..................................................
EX896375       --> ..................................................
EY941277       --> ..................................................
EX771118       --> ..................................................
EX894290       --> ..................................................
EY939267       --> ..................................................
FD964390       --> ..................................................
EV539068       --> ..................................................
EV549180       --> ..................................................
EX896142       --> TTGTATGTTCTTGTTTGTATGCATCTTAAGCGTGGAATAAATGATGTTTT
EV535144       --> TTGTATGTTCTTGTTTGTATGCCTCTTAAACGTGGAATAAATGATGTTTT
EY930307       --> TTGTATGTTCTTGTTTGTTTGCATCTTAAGCGTGGAATAAATGATGTTTT

               901    -    951
UN23517        --> TGTAACTTGAGATTTTATGATTAAAAATGAGCTTTGCATCGGCGAGGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY935843       <-- ..................................................
EW729792       <-- TGTAACTTG.........................................
EY935236       <-- TGTg..............................................
EY926659       <-- TGT...............................................
EX898634       <-- TGTgg.............................................
FD958800       <-- TGTg..............................................
EV541382       <-- ..................................................
FD566094       <-- TGgt..............................................
FD969576       <-- TGT...............................................
FD974410       <-- TGT...............................................
EX900315       <-- TGc...............................................
EY929113       <-- TGTg..............................................
FD960407       <-- TGT...............................................
FD531577       <-- ..................................................
EY936892       <-- TGT...............................................
EY936919       <-- TGg...............................................
EY935093       <-- TGc...............................................
FD538775       <-- TGT...............................................
FD969466       <-- TGc...............................................
EV542946       <-- ..................................................
EX900114       <-- TGTAgc............................................
EV544708       <-- TGT...............................................
EX899071       <-- TGc...............................................
EY940007       --> ..................................................
EY933707       --> ..................................................
EY939085       --> ..................................................
FD562109       --> ..................................................
FD962206       --> ..................................................
EW725198       --> ..................................................
EX894804       --> ..................................................
EX896375       --> ..................................................
EY941277       --> ..................................................
EX771118       --> ..................................................
EX894290       --> ..................................................
EY939267       --> ..................................................
FD964390       --> ..................................................
EV539068       --> ..................................................
EV549180       --> ..................................................
EX896142       --> TGTAgc............................................
EV535144       --> TGTAACTTGAGATTT-ATGATTAAAAATGAGCTTTGCATCGGCGAGGATT
EY930307       --> TGTAACTTGAGATTTTATGATTAAAAATGAGCTTTGCATCGGCGAGGATT

               951    -   1001
UN23517        --> GGTCCTCATCGAGGGCGTACAGTAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY935843       <-- ...........................
EW729792       <-- ...........................
EY935236       <-- ...........................
EY926659       <-- ...........................
EX898634       <-- ...........................
FD958800       <-- ...........................
EV541382       <-- ...........................
FD566094       <-- ...........................
FD969576       <-- ...........................
FD974410       <-- ...........................
EX900315       <-- ...........................
EY929113       <-- ...........................
FD960407       <-- ...........................
FD531577       <-- ...........................
EY936892       <-- ...........................
EY936919       <-- ...........................
EY935093       <-- ...........................
FD538775       <-- ...........................
FD969466       <-- ...........................
EV542946       <-- ...........................
EX900114       <-- ...........................
EV544708       <-- ...........................
EX899071       <-- ...........................
EY940007       --> ...........................
EY933707       --> ...........................
EY939085       --> ...........................
FD562109       --> ...........................
FD962206       --> ...........................
EW725198       --> ...........................
EX894804       --> ...........................
EX896375       --> ...........................
EY941277       --> ...........................
EX771118       --> ...........................
EX894290       --> ...........................
EY939267       --> ...........................
FD964390       --> ...........................
EV539068       --> ...........................
EV549180       --> ...........................
EX896142       --> ...........................
EV535144       --> GGTCCTCATCGAGGGCGTACAGT....
EY930307       --> GATCCTCATCGAGGGCGTACAGTAACG