Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN23543

               1      -     51
UN23543        --> TTTTTCCCCAAGCCAAAGTGATCTCGTGAGTTCCAATAGCTTGCGCCCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- ..................................................
EY904431       <-- ..................................................
EX776204       <-- ..................................................
FD944743       <-- ..................................................
EY909665       <-- ..................................................
EY928105       <-- ..................................................
FD935114       <-- ..................................................
EY908794       --> TTTTTCCCCAAGCCAAAGTGATCTCGTGAGTTCCAATAGCTTGCGCCCCC
EY932357       --> ................gggGATCTCGTGAGTTCCAATAGCTTGCGCCCCC
FD938851       --> .................ggGATCTCGTGAGTTCCAATAGCTTGCGCCCCC
FD949047       --> .................ggGATCTCGTGAGTTCCAATAGCTTGCGCCCCC
EX897729       --> .......................ggGTGAGTTCCAATAGCTTGCGCCCCC
FD569218       --> ................................ggAATAGCTTGCGCCCCC
FY430613       --> ................................................gC
FY452407       --> ..................................................
FY452728       --> ..................................................
FY449118       --> ..................................................
FY453335       --> ..................................................
EX765731       --> ..................................................
FY433765       --> ..................................................
EW716335       --> ..................................................
EY913437       --> ..................................................
EX758055       --> ..................................................
EX746577       --> ..................................................

               51     -    101
UN23543        --> GCTTTCTTCTCCAACCCCCAAATCTGAGCTTAGCGTAAATCAGAATCCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- ..................................................
EY904431       <-- ..................................................
EX776204       <-- ..................................................
FD944743       <-- ..................................................
EY909665       <-- ..................................................
EY928105       <-- ..................................................
FD935114       <-- ..................................................
EY908794       --> GCTTTCTTCTCCAACCCCCAAATCTGAGCTTAGCGTAAATCAGAATCCCT
EY932357       --> GCTTTCTTCTCCAACCCCCAAATCTGAGCTTAGCGTAAATCAGAATCCCT
FD938851       --> GCTTTCTTCTCCAACCCCCAAATCTGAGCTTAGCGTAAATCAGAATCCCT
FD949047       --> GCTTTCTTCTCCAACCCCCAAATCTGAGCTTAGCGTAAATCAGAATCCCT
EX897729       --> GCTTTCTTCTCCAACCCCCAAATCTGAGCTTAGCGTAAATCAGAATCCCT
FD569218       --> GCTTTCTTCTCCAACCCCCAAATCTGAGCTTAGCGTAAATCAGAATCCCT
FY430613       --> GCTTTCTTCTCCA-CCCCCAAATCTGAGCTTAGCGTAAATCAGAATCCCT
FY452407       --> .............ACCCCCAA-TCTGAGCTTAGCGTAAATCAGAATCCCT
FY452728       --> ..............CCCCCAAATCTGAGCTTAGCGTAAATCAGAATCCCT
FY449118       --> ...............CCCCCAATCTGAGCTTAGCGTAAATCAGAATCCCT
FY453335       --> ..................................cgtAATCAGAATCCCT
EX765731       --> ..................................................
FY433765       --> ..................................................
EW716335       --> ..................................................
EY913437       --> ..................................................
EX758055       --> ..................................................
EX746577       --> ..................................................

               101    -    151
UN23543        --> AGGGTTCTTCCGATTAGCTCTAAATCAGATCGAACATATCTTTTTCCCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- ..................................................
EY904431       <-- ..................................................
EX776204       <-- ..................................................
FD944743       <-- ..................................................
EY909665       <-- ..................................................
EY928105       <-- ..................................................
FD935114       <-- ..................................................
EY908794       --> AGGGTTCTTCCGATTACCTCTAAATCAGATCGAACATATCTTTTTCCCCG
EY932357       --> AGGGTTCTTCCGATTAGCTCTAAATCAGATCGAACATATCTTTTTCCCCG
FD938851       --> AGGTTTCTTCCGATTAGCTCTAAATCAGATCGAACATATCTTTTTCCCCG
FD949047       --> AGGGTTCTTCCGATTAGCTCTAAATCAGATCGAACATATCTTTTTCCCCG
EX897729       --> AGGGTTCTTCCGATTAGTTCTAAATCAGATCGAACATATCTTTTTCCCCG
FD569218       --> AGGGTTCTTCCGATTAGCTCTAAATCATATCGAACATATCTTTTTCCCCG
FY430613       --> AGGGTTCTTCCGATTAGCTCTAAATCAGATCGAACATATCTTTTTCCCCG
FY452407       --> AGGGTTCTTCCGATTAGCTCTAAATCAGATCGAACATATCTTTTTCCCCG
FY452728       --> AGGGTTCTTCCGATTAGCTCTAAATCAGATCGAACATATCTTTTTCCCCG
FY449118       --> AGGGTTCTTCCGATTAGCTCTAAATCAGATCGAACATATCTTTTTCCCCG
FY453335       --> AGGGTTCTTCCGATTAGCTCTAAATCAGATCGAACATATCTTTTTCCCCG
EX765731       --> ....TTCTTCCGATTAGCTCTAAATCAGATCGAACATATCTTTTTCCCCG
FY433765       --> ..................................................
EW716335       --> ..................................................
EY913437       --> ..................................................
EX758055       --> ..................................................
EX746577       --> ..................................................

               151    -    201
UN23543        --> ATTTAGAAAGATGTCTCAGAACGGGAAGCTGATCCCACCAAATATGGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- ..................................................
EY904431       <-- ..................................................
EX776204       <-- ..................................................
FD944743       <-- ..................................................
EY909665       <-- ..................................................
EY928105       <-- ..................................................
FD935114       <-- ..................................................
EY908794       --> ATTTAGAAAGATGTCTCAGAACGGGAAGCTGATCCCACCAAATATGGATC
EY932357       --> ATTTAGAAAGATGTCTCAGAACGGGAAGCTGATCCCACCAAATATGGATC
FD938851       --> ATTTAGAAAGATGTCTCAGAACGGGAAGCTGATCCCACCAAATATGGATC
FD949047       --> ATTTAGAAAGATGTCTCAGAACGAGAAGCTGATCCCACCAAATATGGATC
EX897729       --> ATTTAGAAAGATGTCTCAGAACGGGAAGCTGATCCCACCAAATATGGATC
FD569218       --> ATTTAGAAAGATGTTTCAGAACGGGAAGCTGATCCCACCAAATATGGATC
FY430613       --> ATTTAGAAAGATGTCTCAGAACGGGAAGCTGATCCCACCAAATATGGATC
FY452407       --> ATTTAGAAAGATGTCTCAGAACGGGAAGCTGATCCCACCAAATATGGATC
FY452728       --> ATTTAGAAAGATGTCTCAGAACGGGAAGCTGATCCCACCAAATATGGATC
FY449118       --> ATTTAGAAAGATGTCTCAGAACGGGAAGCTGATCCCACCAAATATGGATC
FY453335       --> ATTTAGAAAGATGTCTCAGAACGGGAAGCTGATCCCACCAAATATGGATC
EX765731       --> ATTTAGAAAGATGTCTCAGAACGGGAAGCTGATCCCACCAAATATGGATC
FY433765       --> ..................................................
EW716335       --> ..................................................
EY913437       --> ..................................................
EX758055       --> ..................................................
EX746577       --> ..................................................

               201    -    251
UN23543        --> AGAACAGTACGAGGCTCCTCAATCTCACAGTTCTCCAGCGACTCGATCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- ..................................................
EY904431       <-- ..................................................
EX776204       <-- ..................................................
FD944743       <-- ..................................................
EY909665       <-- ..................................................
EY928105       <-- ..................................................
FD935114       <-- ..................................................
EY908794       --> AGAACAGTACGAGGCTCCTCAATCTCACAGTTCTCCAGCGACTCGATCCC
EY932357       --> AGAACAGTACGAGGCTCCTCAATCTCACAGTTCTCCAGCGACTCGATCCC
FD938851       --> AGAACAGTACGAGGCTCCTCAACCTCACAGTTCTCCAGCGACTCGATCCC
FD949047       --> AGAACAGTACTAGGCTCCTCAATCTCACAGTTCTCCAGCGACTCGATCCC
EX897729       --> AGAACAGTACGAGGCTCCTCAATCTCACAGTTCTCCAGCGACTCGATCCC
FD569218       --> AGAACAGTACGAGGCTCCTCAATCTCACAGTTCTCCAGCGACTCGATCCC
FY430613       --> AGAACAGTACGAGGCTCCTCAATCTCACAGTTCTCCAGCGACTCGATCCC
FY452407       --> AGAACAGTACGAGGCTCCTCAATCTCACAGTTCTCCAGCGACTCGATCCC
FY452728       --> AGAACAGTACGAGGCTCCTCAATCTCACAGTTCTCCAGCGACTCGATCCC
FY449118       --> AGAACAGTACGAGGCTCCTCAATCTCACAGTTCTCCAGCGACTCGATCCC
FY453335       --> AGAACAGTACGAGGCTCCTCAATCTCACAGTTCTCCAGCGACTCGATCCC
EX765731       --> AGAACAGTACGAGGCTCCTCAACCTCACAGTTCTCCAGCGACTCGATCCC
FY433765       --> ..................................................
EW716335       --> ..................................................
EY913437       --> ..................................................
EX758055       --> ..................................................
EX746577       --> ..................................................

               251    -    301
UN23543        --> TTCATCGAGGAAATCCTCATCACCGCCGCTCACGTCACTTTCTACGAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- ..................................................
EY904431       <-- ..................................................
EX776204       <-- ..................................................
FD944743       <-- ..................................................
EY909665       <-- ..................................................
EY928105       <-- ..................................................
FD935114       <-- ..................................................
EY908794       --> TTCATCGAGGAAATCCTCATCACCGCCGCTCACGTCACTTTCTACGAATT
EY932357       --> TTCATCGAGGAAATCCTCATCACCGCCGCTCACGTCACTTTCTACGAATT
FD938851       --> TTCATCGAGGAGATCCTCATCACCGCCGCTCACGTCACTTTCTACGAATT
FD949047       --> TTCATCGAGGAAATCCTCATCACCGCCGCTCACGTCACTTTCTACGAATT
EX897729       --> TTCATCGAGGAAATCCTCATCACCGCCGCTCACGTCACTTTCTACGAATT
FD569218       --> TTCATCGAGGAAATCCTCATCACCGCCGCTCACGTCACTTTCTACGAATT
FY430613       --> TTCATCGAGGAAATCCTCATCACCGCCGCTCACGTCACTTTCTACGAATT
FY452407       --> TTCATCGAGGAAATCCTCATCACCGCCGCTCACGTCACTTTCTACGAATT
FY452728       --> TTCATCGAGGAAATCCTCATCACCGCCGCTCACGTCACTTTCTACGAATT
FY449118       --> TTCATCGAGGAAATCCTCATCACCGCCGCTCACGTCACTTTCTACGAATT
FY453335       --> TTCATCGAGGAAATCCTCATCACCGCCGCTCACGTCACTTTCTACGAATT
EX765731       --> TTCATCGAGGAGATCCTCATCACCGCCGCTCACGTCACTTTCTACGAATT
FY433765       --> ..................ATCACCGCCGCTCACGTCACTTTCTACGAATT
EW716335       --> ..................................................
EY913437       --> ..................................................
EX758055       --> ..................................................
EX746577       --> ..................................................

               301    -    351
UN23543        --> CAACATCGAGATCAGTCAATGGAGTCGTAAGGATGTTGAAGGATCTTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- ..................................................
EY904431       <-- ..................................................
EX776204       <-- ..................................................
FD944743       <-- ..................................................
EY909665       <-- ..................................................
EY928105       <-- ..................................................
FD935114       <-- ..................................................
EY908794       --> CAACATCGAGATCAGTCAATGGAGTCGTAAGGATGTTGAAGGATCTTTGT
EY932357       --> CAACATCGAGATCAGTCAATGGAGTCGTAAGGATGTTGAAGGATCTTTGT
FD938851       --> CAACATCGAGATCAGTCAATGGAGTCGTAAGGATGTTGAAGGATCTTTGT
FD949047       --> CAACATCGAGATCAGTCAATGGAGTCGTAAGGATGTTGAAGGATCTTTGT
EX897729       --> CAACATCGAGATCAGTCAATGGAGTCGTAAGGATGTTGAAGGATCTTTGT
FD569218       --> CAACATCGAGATCAGTCAATGGAGTCGTAAGGATGTTGAAGGATCTTTGT
FY430613       --> CAACATCGAGATCAGTCAATGGAGTCGTAAGGATGTTGAAGGATCTTTGT
FY452407       --> CAACATCGAGATCAGTCAATGGAGTCGTAAGGATGTTGAAGGATCTTTGT
FY452728       --> CAACATCGAGATCAGTCAATGGAGTCGTAAGGATGTTGAAGGATCTTTGT
FY449118       --> CAACATCGAGATCAGTCAATGGAGTCGTAAGGATGTTGAAGGATCTTTGT
FY453335       --> CAACATCGAGATCAGTCAATGGAGTCGTAAGGATGTTGAAGGATCTTTGT
EX765731       --> CAACATCGAGATCAGTCAATGGAGTCGTAAGGATGTTGAAGGATCTTTGT
FY433765       --> CAACATCGAGATCAGTCAATGGAGTCGTAAGGATGTTGAAGGATCTTTGT
EW716335       --> ..................................................
EY913437       --> ..................................................
EX758055       --> ..................................................
EX746577       --> ..................................................

               351    -    401
UN23543        --> TTGTTGTCAAAAGAAATAAACAACCTCGGTTTCAGTTTATCGTGATGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- ..................................................
EY904431       <-- ..................................................
EX776204       <-- ..................................................
FD944743       <-- ..................................................
EY909665       <-- ..................................................
EY928105       <-- ..................................................
FD935114       <-- ..................................................
EY908794       --> TTGTTGTCAAAAGAAATAAACAACCTCGGTTTCAGTTTATCGTGATGAAT
EY932357       --> TTGTTGTCAAAAGAAATAAACAACCCCGGTTTCAGTTTATCGTGATGAAT
FD938851       --> TTGTTGTCAAAAGAAATAAACAACCTCGGTTTCAGTTTATCGTGATGAAT
FD949047       --> TTGTTGTCAAAAGAAATAAACAACCTCGGTTTCAGTTTATCGTGATGAAT
EX897729       --> TTGTTGTCAAAAGAAATAAACAACCTCGGTTTCAGTTTATCGTGATGAAT
FD569218       --> TTGTTGTCAAAAGAAATAAACAACCTCGGTTTCAGTTTATCGTGATGAAT
FY430613       --> TTGTTGTCAAAAGAAATAAACAACCTCGGTTTCAGTTTATCGTGATGAAT
FY452407       --> TTGTTGTCAAAAGAAATAAACAACCTCGGTTTCAGTTTATCGTGATGAAT
FY452728       --> TTGTTGTCAAAAGAAATAAACAACCTCGGTTTCAGTTTATCGTGATGAAT
FY449118       --> TTGTTGTCAAAAGAAATAAACAACCTCGGTTTCAGTTTATCGTGATGAAT
FY453335       --> TTGTTGTCAAAAGAAATAAACAACCTCGGTTTCAGTTTATCGTGATGAAT
EX765731       --> TTGTTGTCAAAAGAAATAAACAACCTCGGTTTCAGTTTATCGTGATGAAT
FY433765       --> TTGTTGTCAAAAGAAATAAACAACCTCGGTTTCAGTTTATCGTGATGAAT
EW716335       --> ..................................................
EY913437       --> ..................................................
EX758055       --> ..................................................
EX746577       --> ..................................................

               401    -    451
UN23543        --> CGTCGGAATACAGATAATCTGGTGGAAGATCTGCTGGGGGATTTTGAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- ..................................................
EY904431       <-- ..................................................
EX776204       <-- ..................................................
FD944743       <-- ..................................................
EY909665       <-- ..................................................
EY928105       <-- ..................................................
FD935114       <-- ..................................................
EY908794       --> CGTCGGAATACAGATAATCTGGTGGAAGATCTGCTGGGGGATTTTGAGTA
EY932357       --> CGTCGGAATACAGATAATCTGGTGGAAGATCTGCTGGGGGATTTTGAGTA
FD938851       --> CGTCGGAATACAGATAATCTGGTGGAAGATCTCCTGGGGGATTTTGAGTA
FD949047       --> CGTCGGAATACAGATAATCTGGTGGAAGATCTGCTGGGGGATTTTGAGTA
EX897729       --> CGTCGGAATACAGATAATCTGGTGGAAGATCTGCTGGGGGATTTTGAGTA
FD569218       --> CGTCGGAATACAGATAATCTGGTGGAAGATCTGCTGGGGGATTTTGAGTA
FY430613       --> CGTCGGAATACAGATAATCTGGTGGAAGATCTGCTGGGGGATTTTGAGTA
FY452407       --> CGTCGGAATACAGATAATCTGGTGGAAGATCTGCTGGGGGATTTTGAGTA
FY452728       --> CGTCGGAATACAGATAATCTGGTGGAAGATCTGCTGGGGGATTTTGAGTA
FY449118       --> CGTCGGAATACAGATAATCTGGTGGAAGATCTGCTGGGGGATTTTGAGTA
FY453335       --> CGTCGGAATACAGATAATCTGGTGGAAGATCTGCTGGGGGATTTTGAGTA
EX765731       --> CGTCGGAATACAGATAATCTGGTGGAAGATCTGCTGGGGGATTTTGAGTA
FY433765       --> CGTCGGAATACAGATAATCTTGTGGAAGATCTGCTGGGGGATTTTGAGTA
EW716335       --> ..................................................
EY913437       --> ..................................................
EX758055       --> ..................................................
EX746577       --> ..................................................

               451    -    501
UN23543        --> TGAAGTCCAAGGTCCATATTTACTTTACCGTAATGCATCTCAAGAAGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- ..................................................
EY904431       <-- ..................................................
EX776204       <-- ..................................................
FD944743       <-- ..................................................
EY909665       <-- ..................................................
EY928105       <-- ..................................................
FD935114       <-- ..................................................
EY908794       --> TGAAGTCCAAGGTCCATATTTACTTTACCGTAATGCATCTCAAGAAGTGA
EY932357       --> TGAAGTCCAAGGTCCATATTTACTTTACCGTAATGCATCTCAAGAAGTGA
FD938851       --> TGAAGTCCAAGGTCCATATTTACTTTACCGTAATGCATCTCAAGAAGTGA
FD949047       --> TGAAGTCCAAGGTCCATATTTACTTTACCGTAATGCATCTCAAGAAGTGA
EX897729       --> TGAAGTCCAAGGTCCATATTTACTTTACCGTAATGCATCTCAAGAAGTGA
FD569218       --> TGAAGTCCAAGGTCCATATTTACTTTACCGTAATGCATCTCAAGAAGTGA
FY430613       --> TGAAGTCCAAGGTCCATATTTACTTTACCGTAATGCATCTCAAGAAGTGA
FY452407       --> TGAAGTCCAAGGTCCATATTTACTTTACCGTAATGCATCTCAAGAAGTGA
FY452728       --> TGAAGTCCAAGGTCCATATTTACTTTACCGTAATGCATCTCAAGAAGTGA
FY449118       --> TGAAGTCCAAGGTCCATATTTACTTTACCGTAATGCATCTCAAGAAGTGA
FY453335       --> TGAAGTCCAAGGTCCATATTTACTTTACCGTAATGCATCTCAAGAAGTGA
EX765731       --> CGAAGTCCAAGGTCCATATTTACTTTACCGTAATGCATCTCAAGAAGTTA
FY433765       --> TGAAGTCCAAGGTCCATATTTACTTTACCGTAATGCTTCTCAAGAAGTGA
EW716335       --> ..................................................
EY913437       --> ..................................................
EX758055       --> ..................................................
EX746577       --> ..................................................

               501    -    551
UN23543        --> ATGGCATTTGGTTCTACAATAAACGTGAATGTGAGGAGGTTGCTCGTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- ..................................................
EY904431       <-- ..................................................
EX776204       <-- ..................................................
FD944743       <-- ..................................................
EY909665       <-- ..................................................
EY928105       <-- ..................................................
FD935114       <-- ..................................................
EY908794       --> ATGGCATTTGGTTCTACAATAAACGTGA-TGTGAGGAGGT-GCTCGTCTT
EY932357       --> ATGGCATTTGGTTCTACAATAAACGTGAATGTGAGGAGGTTGCTCGTCTT
FD938851       --> ATGGCATTTGGTTCTACAATAAACGCGAATGTGAGGAGGTTGCTCGTCTT
FD949047       --> ATGGCATTTGGTTCTACAATAAACGTGGATGTGAGGAGGTTGCTCGTCTT
EX897729       --> ATGGCATTTGGTTCTACAATAAACGTGAATGTGAGGAGGTTGCTCGTCTT
FD569218       --> ATGGCATTTGGTTCTACAATAAACGTGAATGTGAGGAGGTTGCTCGTCTT
FY430613       --> ATGGCATTTGGTTCTACAATAAACGTGAATGTGAGGAGGTTGCTCGTCTT
FY452407       --> ATGGCATTTGGTTCTACAATAAACGTGAATGTGAGGAGGTTGCTCGTCTT
FY452728       --> ATGGCATTTGGTTCTACAATAAACGTGAATGTGAGGAGGTTGCTCGTCTT
FY449118       --> ATGGCATTTGGTTCTACAATAAACGTGAATGTGAGGAGGTTGCTCGTCTT
FY453335       --> ATGGCATTTGGTTCTACAATAAACGTGAATGTGAGGAGGTTGCTCGTCTT
EX765731       --> ATGGCATTTGGTTCTACAATAAACGCGAATGTGAGGAGGTTGCTCGTCTT
FY433765       --> ATGGCATTTGGTTCTACAATAAACGCGAATGTGAGGAGGTTGCTCGTCTT
EW716335       --> ........gGGTTCTACAATAAACGCGAATGTGAGGAGGTTGCTCGTCTT
EY913437       --> ..................................................
EX758055       --> ..................................................
EX746577       --> ..................................................

               551    -    601
UN23543        --> TT-CGACAGATTACTTAGCGCTTATTCCAAGGCTAACCAGAAGCCAAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- ..................................................
EY904431       <-- ..................................................
EX776204       <-- ..................................................
FD944743       <-- ..................................................
EY909665       <-- ..................................................
EY928105       <-- ..................................................
FD935114       <-- ..................................................
EY908794       --> TTTCGACAGATTACTTAGCGCTTATTCCA-GGCTAACCAGAAGCCAA-TA
EY932357       --> TT-CGACAGATTACTTAGCGCTTATTCCAAGGCTAACCAGAAGCCAAATA
FD938851       --> TT-CGACAGATTACTTAGCGCTTATTCCAAG...................
FD949047       --> TT-CGACAGATTACTTAGCGCTTATTCCAAGGCTAACCAGAAGCCAAATA
EX897729       --> TT-CGACAGATTACTTAGCTCTTATTCCAAGGCTAACCAGAAGCCAAATA
FD569218       --> TT-CGACAGATTACTTAGCGCTTATTCCAAGGCTAACCAGAAGCCAAATA
FY430613       --> TT-CGACAGATTACTTAGCGCTTATTCCAAGGCTAACCAGAAGCCAAATA
FY452407       --> TT-CGACAGATTACTTAGCGCTTATTCCAAGGCTAACCAGAAGCCAAATA
FY452728       --> TT-CGACAGATTACTTAGCGCTTATTCCAAGGCTAACCAGAAGCCAAATA
FY449118       --> TT-CGACAGATTACTTAGCGCTTATTCCAAGGCTAACCAGAAGCCAAATA
FY453335       --> TT-CGACAGATTACTTAGCGCTTATTCCAAGGCTAACCAGAAGCCAAATA
EX765731       --> TT-CGACAGATTACTTAGCGCTTATTCCAAGGCAAACCAGAAGCCAAATA
FY433765       --> TT-CGACAGATTACTTAGCGCTTATTCCAAGGCAAACCAGAAGCCAAATA
EW716335       --> TT-CGACAGATTACTTAGCGCTTATTCCAAGGCAAACCAGAAGCCAAATA
EY913437       --> ..................................................
EX758055       --> ..................................................
EX746577       --> ..................................................

               601    -    651
UN23543        --> CGTCATCTTCGAAAAGCGAGTTTGAGGAATTGGAAGCTGTGCCTACAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- ..................................................
EY904431       <-- ..................................................
EX776204       <-- ..................................................
FD944743       <-- ..................................................
EY909665       <-- ..................................................
EY928105       <-- ..................................................
FD935114       <-- ..................................................
EY908794       --> CGTCATCTTCaaa.....................................
EY932357       --> CGTCATCTTCGAAAAGCGAGTTTGAGGA-TTGGAAGCTGTGCCTACAATG
FD938851       --> ..................................................
FD949047       --> CGTCATCTTCGAAAAGCGAGTTTGAGGAATTGGAAGCTGTGCCTACAATG
EX897729       --> CGTCATCTTC........................................
FD569218       --> CGTCATCTTCGAAAAGCGAGTTTGAGGAATTGGAAGCTGTGCCTACAATG
FY430613       --> CGTCATCTTCGAAAAGCGAGTTTGAGGAATTGGAAGCTGTGCCTACAATG
FY452407       --> CGTCATCTTCGAAAAGCGAGTTTGAGGAATTGGAAGCTGTGCCTACAATG
FY452728       --> CGTCATCTTCGAAAAGCGAGTTTGAGGAATTGGAAGCTGTGCCTACAATG
FY449118       --> CGTCATCTTCGAAAAGCGAGTTTGAGGAATTGGAAGCTGTGCCTACAATG
FY453335       --> CGTCATCTTCGAAAAGCGAGTTTGAGGAATTGGAAGCTGTGCCTACAATG
EX765731       --> CCTCATCTTCGAAAAGCGAGTTTGAGGAATTGGAAGCTGTGCCTACAATG
FY433765       --> CGTCATCTTCGAAAAGCGAGTTTGAGGAATTGGAAGCTGTGCCTACAATG
EW716335       --> CGTCATCTTCGAAAAGCGAGTTTGAGGAATTGGAAGCTGTGCCTACAATG
EY913437       --> ..............................gGGAAGCTGTGCCTACAATG
EX758055       --> ..................................................
EX746577       --> ..................................................

               651    -    701
UN23543        --> GCAGTTATGGATGGTCCTCTTGAACCATCTTCAACTGCTAGGGATGCCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- ..................................................
EY904431       <-- ..................................................
EX776204       <-- ..................................................
FD944743       <-- ..................................................
EY909665       <-- ..................................................
EY928105       <-- ..................................................
FD935114       <-- ..................................................
EY908794       --> ..................................................
EY932357       --> GCAGTTATGGATGGTCCTCTTGAACCATCTTCAACTGCTAGGGATGCCCC
FD938851       --> ..................................................
FD949047       --> GCAGTTATGGATGGTCCTCTTGAACCATCTTCAACTGCTAGGGA......
EX897729       --> ..................................................
FD569218       --> GCAGTTATGGATGGTCCTCTTGAACCATCTTCAACTGCTAGGGATGCCCC
FY430613       --> GCAGTTATGGATGGTCCTCTTGAACCATCTTCAACTGCTAGGGATGCCCC
FY452407       --> GCAGTTATGGATGGTCCTCTTGAACCATCTTCAACTGCTAGGGATGCCCC
FY452728       --> GCAGTTATGGATGGTCCTCTTGAACCATCTTCAACTGCTAGGGATGCCCC
FY449118       --> GCAGTTATGGATGGTCCTCTTGAACCATCTTCAACTGCTAGGGATGCCCC
FY453335       --> GCAGTTATGGATGGTCCTCTTGAACCATCTTCAACTGCTAGGGATGCCCC
EX765731       --> GCAGTAATGGATGGTCCTCTTGAACCATCTTCAACTGCCAGGGATGCCCC
FY433765       --> GCAGTTATGGATGGTCCTCTTGAACCATCTTCAACTGCTAGGGATGCCCC
EW716335       --> GCAGTTATGGATGGTCCTCTTGAACCATCTTCAACTGCTAGGGATGCGCC
EY913437       --> GCAGTCATGGATGGTCCTCTTGAACCATCTTCAACTGCTAGGGATGCCCC
EX758055       --> ..................................................
EX746577       --> ..................................................

               701    -    751
UN23543        --> TAACGATCCTGCTTTTGTCAACTTCTTCAGCTCAGCGATGGCTCTTGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- .............TTTGTCAACTTCTTTAGCTCAGCGATGGCTCTTGGGA
EY904431       <-- .............TTTGTCAACTTCTTCAGCTCAGCCATGGCTCTCGGGA
EX776204       <-- ...............................TCAGCGATGGCTCTTGGGA
FD944743       <-- ................................CAGCGATGGCTCTTGGGA
EY909665       <-- .................................AGCCATGGCTCTCGGGA
EY928105       <-- ..................................................
FD935114       <-- ..................................................
EY908794       --> ..................................................
EY932357       --> TAACGATCCTGCTTT-GTC-ACTTCTTCAGCTCAGCGATGGCTCTTGGGA
FD938851       --> ..................................................
FD949047       --> ..................................................
EX897729       --> ..................................................
FD569218       --> TAACGATC-TGCTTTTGTCA-CTTCTTCAGCTCAGCGA-CGCTCTTGGGA
FY430613       --> TAACGATCCTGCTTTTGTCAACTTCTTCAGCTCAGCGATGGCTCTTGGGA
FY452407       --> TAACGATCCTGCTTTTGTCAACTTCTTCAGCTCAGCGATGGCTCTTGGGA
FY452728       --> TAACGATCCTGCTTTTGTCAACTTCTTCAGCTCAGCGATGGCTCTTGGGA
FY449118       --> TAACGATCCTGCTTTTGTCAACTTCTTCAGCTCAGCGATGGCTCTTGGGA
FY453335       --> TAACGATCCTGCTTTTGTCAACTTCTTCAGCTCAGCGATGGCTCTTGGGA
EX765731       --> TAACGATCCTGCTTTTGTCAACTTCTTTAGCTCAGCGATGGCTCTTGGGA
FY433765       --> TAACGATCCTGCTTTTGTCAACTTCTTTAGCTCAGCGATGGCTCTTGGGA
EW716335       --> TAACGATCCTGCTTTCGTCAACTTCTTCAGCTCAGCGATGGCTCTTGGGA
EY913437       --> TAACGATCCTGCTTTTGTCAACTTCTTCAGCTCAGCCATGGCTCTCGGGA
EX758055       --> ..................................................
EX746577       --> ..................................................

               751    -    801
UN23543        --> ACACTTCAAGTGGACAGACAAGTGGACCACCGTACCAACAACCATCGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- ACACTTCGAGTGGACAGACAAGTGGACCAACGTACCAACAACCATCAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904431       <-- ACGCTTCAAGTGGACAGACAAGTGGACCAACGTACCAACAACCATCAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776204       <-- ACACTTCGAGTGGACAGACAAGTGGACCAACGTACCAACAACCATCAGCA  Raphanus raphanistrum subsp. landra
FD944743       <-- ACACTTCAAGTGGACAGACAAGTGGACCACCGTACCAACAACCATCGGCA  Raphanus sativus cv Early Scarlet Globe
EY909665       <-- ACACTTCAAGTGGACAGACAAGTGGACCAACGTACCAACAACCATCAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928105       <-- ..ACTTCAAGTGGACAGACAAGTGGACCACCGTACCAACAACCATCGGCA  Raphanus sativus var. oleiformis
FD935114       <-- .............................................CGGCA  Raphanus sativus var. oleiformis
EY908794       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932357       --> cact..............................................  Raphanus sativus var. oleiformis
FD938851       --> ..................................................  Raphanus sativus var. oleiformis
FD949047       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX897729       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD569218       --> ACACTTCAAGTGGACAGACA-GTGGAC-ACCGTACCA-CAACCATCGGCA  Raphanus sativus cv Early Scarlet Globe
FY430613       --> ACACTTCAAGTGGACAGACAAGTGGACCACCGTACCAACAACCATCGGCA  Raphanus sativus cv GSK3-1
FY452407       --> ACACTTCAAGTGGACAGACAAGTGGACCACCGTACCAACAACCATCGGCA  Raphanus sativus cv GSK3-1
FY452728       --> ACACTTCAAGTGGACAGACAAGTGGACCACCGTACCAACAACCATCGGCA  Raphanus sativus cv GSK3-1
FY449118       --> ACACTTCAAGTGGACAGACAAGTGGACCACCGTACCAACAACCATCGGCA  Raphanus sativus cv GSK3-1
FY453335       --> ACACTTCAAGTGGACAGACAAGTGGACCACCGTACCAACAACCATCGGCA  Raphanus sativus cv GSK3-1
EX765731       --> ACACTTCGAGTGGACAGACAAGTGGACCAACGTACCAACAACCATCAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY433765       --> ACAATTCAAGTGGACAGACAAGTGGACCACCGTACCAACAACCATCAGCA  Raphanus sativus cv GSK3-1
EW716335       --> ACACTTCGAGTGGACCCGCAAGTGGACAACCGTACCAACAACCATCGGCA  Raphanus sativus var. oleiformis
EY913437       --> ACACTTCAAGTGGACAGACAAGTGGACCAACGTACCAACAACCATCAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX758055       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX746577       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               801    -    851
UN23543        --> GTTCCACTGCAACCTCACCAACCCACCCTTGCCCCTCCTGCACCGACAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- ATTCCACTGCAACCTCACCAACCCACCCTTGCCTCTCCTGCACTGACAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904431       <-- ATTCCACTGCAACCTCACCAACCCACCCTTGCCCCTCCTGCACCGACAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776204       <-- ATTCCACTGCAACCTCACCACCCCACCCTTGCCTCTCCTGCACTGACAGC  Raphanus raphanistrum subsp. landra
FD944743       <-- GTTCCACTGCAACCTCACCAACCCACCCTTGCCCCTC-TGCACCGACAGC  Raphanus sativus cv Early Scarlet Globe
EY909665       <-- ATTCCACTGCAACCTCACCAACCCACCCTTGCCCCTCCTCCACCGACAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928105       <-- GTTTCACTGCAACCTCACCAACCCACCCTTGCCCCTCCTGCACCGACAGC  Raphanus sativus var. oleiformis
FD935114       <-- GTTCCACTGCAACCTCACCAACCCACCCTTGCCCC-CCTGCACCGACAGC  Raphanus sativus var. oleiformis
EY908794       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932357       --> ..................................................  Raphanus sativus var. oleiformis
FD938851       --> ..................................................  Raphanus sativus var. oleiformis
FD949047       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX897729       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD569218       --> GT-CCACTGCActca...................................  Raphanus sativus cv Early Scarlet Globe
FY430613       --> GTTCCACTGCAACCTCACCAACCCACCCTTGCCCCTCCTGCACCGACAGC  Raphanus sativus cv GSK3-1
FY452407       --> GTTCCACTGCAACCTCACCAACCCACCCTTGCCCCTCCTGCACCGACAGC  Raphanus sativus cv GSK3-1
FY452728       --> GTTCCACTGCAACCTCACCAACCCACCCTTGCCCCTCCTGCACCGACAGC  Raphanus sativus cv GSK3-1
FY449118       --> GTTCCACTGCAACCTCACCAACCCACCCTTGCCCCTCCTGCACCGACAGC  Raphanus sativus cv GSK3-1
FY453335       --> GTTCCACTGCAACCTCACCAACCCACCCTTGCCCCTCCTGCACCGACAGC  Raphanus sativus cv GSK3-1
EX765731       --> ATTCCACTGCAACCTCACCAACCCACC-TTG-CTCT-CTGCACTGACAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY433765       --> ATTCCACTGCAACCTCACCAACCCACTCTTGCCCCTCCTGCACCGACAGC  Raphanus sativus cv GSK3-1
EW716335       --> GTTCCACTGCAACCTCACCAACCCACCCTTGCCCCTCCTGCACCGACAGC  Raphanus sativus var. oleiformis
EY913437       --> ATTCCACTGCAACCTCACCAACCCACCCTTGCCCCTCCTCCACCGACAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX758055       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX746577       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               851    -    901
UN23543        --> TGCACCTCCACAGATATTATCACCACCGCCTCTACAATCCTCCTCTCCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- TGCACCTCCACAGATATTATCACCACCGCCTCTACAATCCTCCTCTCCTA
EY904431       <-- TGCACCTCCACAGATATTATCACCACCGCCTCTACAATCCTCCTCTCCTA
EX776204       <-- TGCACCTCCACAGATATTATCACCACCGCCTCTACAATCCTCCTCTCCTA
FD944743       <-- TGCACCTCCACAGATATTATCACCACCGCCTCTACAATCCTCCTCTCCTA
EY909665       <-- TGCACCCCCACAGATATTATCACCACCGCCTCTACAATCCTCCTCTCCTA
EY928105       <-- TGCACCTCCACAGATATTATCACCACCGCCTCTACAATCCTCCTCTCCTA
FD935114       <-- TGCACCTCCACAGATATTATCACCACCGCCTCTGCAATCCTCCTCGCCTA
EY908794       --> ..................................................
EY932357       --> ..................................................
FD938851       --> ..................................................
FD949047       --> ..................................................
EX897729       --> ..................................................
FD569218       --> ..................................................
FY430613       --> TGCACCTCCACAGATATTATCACCACCGCCTCTACAATCCTCCTCTCCTA
FY452407       --> TGCACCTCCACAGATATTATCACCACCGCCTCTACAATCCTCCTCTCCTA
FY452728       --> TGCACCTCCACAGATATTATCACCACCGCCTCTACAATCCTCCTCTCCTA
FY449118       --> TGCACCTCCACAGATATTATCACCACC.......................
FY453335       --> TGCACCTCCACAGATATTATCACCACCGCCTCTACAATCCTCCTCTCCTA
EX765731       --> TGCAC-TCCACAGATATTA...............................
FY433765       --> TGCACCTCCACAGATATTATCACCCCCGCCTCTACAATCCTCCTCTCCTA
EW716335       --> TGCACCTCCACAGATATTATCACCACCGCCTCTGCAATCCTCCTCGCCTA
EY913437       --> TGCACCCCCACAGATATTATCACCACCGCCTCTACAATCCTCCTCTCCTA
EX758055       --> ....gCTCCACAGATATTATCACCACCGCCTCTACAATCCTCCTCTCCTA
EX746577       --> ..................................................

               901    -    951
UN23543        --> TGATGCCTCTCTTTGACAACAATCCTGATCTTATCAGCAGCAAGTCCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- TGATGCCTCTCTTTGACAACAATCCTGATCTTATCAGCAGCAAGTCCAAT
EY904431       <-- TGATGCCTCTCTTTGACAACAATCCTGATCTTATCAGCAGTAAGTCCAAT
EX776204       <-- TGATGCCTCTCTTTGACGACAATCCTGATCTTATCAGCAGCAAGTCCAAT
FD944743       <-- TGATGCCTCTCTTTGACAACAATCCTGATCTTATCAGCAGCAAGTCCAAT
EY909665       <-- TGATGCCTCTCTTTGACAACAATCCTGATCTTATCAGCAGCAAGTCTAAT
EY928105       <-- TGATGCCTCTCTTTGACAACAATCCTGATCTTATCAGCAGCAAGTCCAAT
FD935114       <-- TGATGCCTCTCTTTGACAACAATCCTGATCTTATCAGCAGCAAGTCCAAT
EY908794       --> ..................................................
EY932357       --> ..................................................
FD938851       --> ..................................................
FD949047       --> ..................................................
EX897729       --> ..................................................
FD569218       --> ..................................................
FY430613       --> TGATGCCTCTCTTTGACAACAATCCTGATCTTATCAGCAGCAAGTCCAA.
FY452407       --> TGATGCCTCTCTTTGACAACAATCCTGATCTTATCAGCAGCAAGTCC...
FY452728       --> TGATGCCTCTCTTTGACAAACATCCTGATCTTATCAGCAGCAAGTCCAAT
FY449118       --> ..................................................
FY453335       --> TGATGCCTCTCTTTGACAACAATCCTGATCTTATCAGCAGCAAGTCCAAT
EX765731       --> ..................................................
FY433765       --> TGATGCCTCTCTTTGACAACAATCCTGATCTTATCAGCAGCAAGTCCAAT
EW716335       --> TGATGCCTCTCTTTGACAACAATCCTGATCTTATCAGCAGCAAGTCCAAT
EY913437       --> TGATGCCTCTCTTTGACAACAATCCTGATCTTATCAGCAGCAAGTCTAAT
EX758055       --> TGATGCCTCTCTTTGACAACAATCCTGAACTTATCAGCAGTAAGTCCAAT
EX746577       --> ..................................................

               951    -   1001
UN23543        --> GTTCACACGGATTTGGTGACGCCGTCCTCGTTCTTTGGGCCCCCACGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- GTTCACACGGATCTGGTGACGCCGTCCTCGTTCTTTGGGCCCCCACGGAT
EY904431       <-- GTTCACACGGATTTGGTGACGCCGTCCTCGTTCTTTGGGCCCCCACGGAT
EX776204       <-- GTTCACACGGATCTGGTGACGCCGTCCTCGTTCTTTGGGCCCCCACGGAT
FD944743       <-- GTTCACACGGATTTGGTGACGCCGTCCTCGTTCTTTGGGCCCCCACGGAT
EY909665       <-- GTTCACACGGATTTGGTGACGCCGTCCTCCTTCTTTGGGCCCCCACGGAT
EY928105       <-- GTTCACACGGATTTGGTGACGCCGTCCTCGTTCTTTGGGCCCCCACGGAT
FD935114       <-- GTTCACACGGATTTGGTGACGCCGTCCTCGTTCTTTAGGCCCCCACGGAT
EY908794       --> ..................................................
EY932357       --> ..................................................
FD938851       --> ..................................................
FD949047       --> ..................................................
EX897729       --> ..................................................
FD569218       --> ..................................................
FY430613       --> ..................................................
FY452407       --> ..................................................
FY452728       --> G.................................................
FY449118       --> ..................................................
FY453335       --> GTTCA.............................................
EX765731       --> ..................................................
FY433765       --> GTTCACACGGATTTGGTGACGCCGTCCTCGTTCTTTGGGCCCCCACGGAT
EW716335       --> GTTCACACGGATTTGGTGACGCCGTCCTCGTTCTTTAGGCCCCCACGGAT
EY913437       --> GTTCACACGGATTTGGTGACGCCGTCCTCCTTCTTTGGGCCCCCACGGAT
EX758055       --> GTTCACACGGACTTGGTGACGCCGTCCTCGTTCTTTGGACCCCCACGGAT
EX746577       --> ..................................................

               1001   -   1051
UN23543        --> GATGGCACAACCACACCTCATTCCTGGTTCATCTATTCCCACTACACCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- GATGACACAACCACACCTCATTCCTGGTTCATCTATTCCCACTACACCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904431       <-- GATGGCACGACCACACCTCATTCCTGGTTCATCTATTCCCACAACACCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776204       <-- GATGACACAACCACGCCTCATTCCTGGTTCATCTATTCCCACTACACCTC  Raphanus raphanistrum subsp. landra
FD944743       <-- GATGGCACAACCACACCTCATTCCTGGTTCATCTATTCCTACTACACCTC  Raphanus sativus cv Early Scarlet Globe
EY909665       <-- GATGACACAACCACACCTCATTCCTGGTTCATCTATTCCCACTACACCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928105       <-- GATGGCACAACCACACCTCATTCCTGGTTCATCTATTCCTACTACACCTC  Raphanus sativus var. oleiformis
FD935114       <-- GATGGCACAACCACACCTCATTCCTGGTTCATCTATTCCTACTACACCTC  Raphanus sativus var. oleiformis
EY908794       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932357       --> ..................................................  Raphanus sativus var. oleiformis
FD938851       --> ..................................................  Raphanus sativus var. oleiformis
FD949047       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX897729       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD569218       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY430613       --> ..................................................  Raphanus sativus cv GSK3-1
FY452407       --> ..................................................  Raphanus sativus cv GSK3-1
FY452728       --> ..................................................  Raphanus sativus cv GSK3-1
FY449118       --> ..................................................  Raphanus sativus cv GSK3-1
FY453335       --> ..................................................  Raphanus sativus cv GSK3-1
EX765731       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY433765       --> GATGGCACAACCACACCTCATTCCTGGTTCATCTATTCCCACTACACCTC  Raphanus sativus cv GSK3-1
EW716335       --> GATGGCACAACCACACCTCATTCCTGGTTCATCTATTCCTACTACACCTC  Raphanus sativus var. oleiformis
EY913437       --> GATGACACAACCACACCTCATTCCTGGTTCATCTATTCCCACTACACCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX758055       --> GATGGCACAACCACACCTCATTCCTGGTTCATCTATTCCCACTACACCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX746577       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               1051   -   1101
UN23543        --> CTATGAACCTTAATAATGCGACTCACCAGCAGCGCCCATATGGTACTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- CTATGAACCTTAATAATGCGACTCACCGGCAGCGCCCATATGGTACTCCA
EY904431       <-- CTATGAACCTTAATAATGCGACTCACCAGCAGCGCCCATATGGTACTCCA
EX776204       <-- CTATGAACCTTAATAATGCGACTCACCAGCAGCGCCCATATGGTACTCCA
FD944743       <-- CTATGAACCTTAATAATGCGACTCACCAGCAGCGCCCATATGGTACTCCA
EY909665       <-- CTATGAACCTTAATAATGCGACTCACCAGCAGCGCCCATATGGTACTCCA
EY928105       <-- CTATGAACCTTAATAATGCGACTCACCAGCAGCGCCCATATGGTACTCCA
FD935114       <-- CTATGAACCTTAATAATGCGACTCACCAGCAGCGCCCATATGGTACTCCA
EY908794       --> ..................................................
EY932357       --> ..................................................
FD938851       --> ..................................................
FD949047       --> ..................................................
EX897729       --> ..................................................
FD569218       --> ..................................................
FY430613       --> ..................................................
FY452407       --> ..................................................
FY452728       --> ..................................................
FY449118       --> ..................................................
FY453335       --> ..................................................
EX765731       --> ..................................................
FY433765       --> CTATGAACCTTAATAATGCGACTCACCAGCAGCGCCCAT...........
EW716335       --> CTATGAACCTTAATAATGCGACTCACCAGCAGCGCCCATATGGTACTCCA
EY913437       --> CTATGAACCTTAATAATGCGACTCACCAGCAGCGCCCATATGGTACTCCA
EX758055       --> CTATGAACCTTAATAATGCGACTCACCAGCAGCGCCCATATGGTACTCCA
EX746577       --> ..................................................

               1101   -   1151
UN23543        --> ATGCTCCAGCCTTTCCCACCACCAACTCCACCAGCATCACTCGCTCCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- ATGCTCCAGCCTTTCCCACCACCAACTCCACCAGCATCACTCGCTCCTGC
EY904431       <-- ATGCTCCAGCCTTTCCCACCACCAACTCCACCAGCATCACTCGCTCCTGC
EX776204       <-- ATGCTCCAGCCTTTCCCACCACCAACTCCACCAGCATCACTCGCTCCTGC
FD944743       <-- ATGCTCCAGCCTTTCCCACCACCAACTCCACCAGCATCACTCGCTCCTGC
EY909665       <-- ATGCTCCAGCCTTTCCCACCACCAACTCCACCAGCATCACTCGCTCCTGC
EY928105       <-- ATGCTCCAGCCTTTCCCACCACCGACTCCACCAGCATCACTCGCTCCTGC
FD935114       <-- ATGCTCCAGCCTTTCCCACCACCAACTCCACCAGCATCACTCGCTCCTGC
EY908794       --> ..................................................
EY932357       --> ..................................................
FD938851       --> ..................................................
FD949047       --> ..................................................
EX897729       --> ..................................................
FD569218       --> ..................................................
FY430613       --> ..................................................
FY452407       --> ..................................................
FY452728       --> ..................................................
FY449118       --> ..................................................
FY453335       --> ..................................................
EX765731       --> ..................................................
FY433765       --> ..................................................
EW716335       --> ATGCTCCAGCCTTTCCCACCACCAACTCCACCAGCATCACTCGCTCCTGC
EY913437       --> ATGCTCCAGCCTTTCCCACCACCAACTCCACCAGCATCACTCGCTCCTGC
EX758055       --> ATGCTCCAGCCTTTCCCACCACCAACTCCACCAGCATCACTCGCTCCTGC
EX746577       --> ..................................................

               1151   -   1201
UN23543        --> ACACAGTGGCCCGGTTATCAACAGAGACAAAGTCAAAGAAGCCCTGTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- ACACAGTGGCCCGGTTATCAACAGAGACAAAGTCAAAGAAGCGCTGTTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904431       <-- ACACAGTGGCCCGGTTATCAACAGAGACAAAGTCAAAGAAGCCCTGTTAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776204       <-- ACACAGTGGCCCGGTTATCAACAGAGACAAAGTCAAAGAAGCGCTGTTAG  Raphanus raphanistrum subsp. landra
FD944743       <-- ACACAGTGGCCCGGTTATCAACAGAGACAAAGTCAAAGAAGCCCTGTTAG  Raphanus sativus cv Early Scarlet Globe
EY909665       <-- ACACAGTGGCCCGGTTATCAACAGAGACAAAGTCAAAGAAGCGCTGTTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928105       <-- ACACAGTGGCCCGGTTATCAACAGAGACAAAGTCAAAGAAGCCCTGTTAG  Raphanus sativus var. oleiformis
FD935114       <-- ACACAGTGGCCCGGTTATCAACAGAGACAAAGTCAAAGAAGCCCTGTTAG  Raphanus sativus var. oleiformis
EY908794       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932357       --> ..................................................  Raphanus sativus var. oleiformis
FD938851       --> ..................................................  Raphanus sativus var. oleiformis
FD949047       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX897729       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD569218       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY430613       --> ..................................................  Raphanus sativus cv GSK3-1
FY452407       --> ..................................................  Raphanus sativus cv GSK3-1
FY452728       --> ..................................................  Raphanus sativus cv GSK3-1
FY449118       --> ..................................................  Raphanus sativus cv GSK3-1
FY453335       --> ..................................................  Raphanus sativus cv GSK3-1
EX765731       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY433765       --> ..................................................  Raphanus sativus cv GSK3-1
EW716335       --> ACACAGTGGCCCGGTTATCAACAGAGACAAAGTCAAAGAAGCCCTGTTAG  Raphanus sativus var. oleiformis
EY913437       --> ACACAGTGGCCCGGTTATCAACAGAGACAAAGTCAAAGAAGCGCTGTTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX758055       --> ACACAGTGGCCCGGTTATCAACAGAGACAAAGTCAAAGAAGCCCTGTTAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX746577       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               1201   -   1251
UN23543        --> CACTGGTTCAGGAGAATGAATTCATCGACATGGTGACCCGAGCTTTACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- CACTGGTTCAGGAGAATGAATTCATCGACATGGTGACCCGAGCTTTACAA
EY904431       <-- CACTGGTTCAGGAGAATGAATTCATCGACATGGTGACCCGAGCTTTACAA
EX776204       <-- CACTGGTTCAGGAGAATGAATTCATCGACATGGTGACCCGAGCTTTACAA
FD944743       <-- CACTGGTTCAGGAGAATGAATTCATCGACATGGTGACCCGAGCTTTACAA
EY909665       <-- CACTGGTTCAGGAGAATGAATTCACCGACATGGTGACCCGAGCTTTACAA
EY928105       <-- CACTGGTTCAGGAGAATGAATTCATCGACATGGTGACCCGAGCTTTACAA
FD935114       <-- CACTGGTTCAGGAGAATGAATTCATCGACATGGTGACCCTAGCTTTACAA
EY908794       --> ..................................................
EY932357       --> ..................................................
FD938851       --> ..................................................
FD949047       --> ..................................................
EX897729       --> ..................................................
FD569218       --> ..................................................
FY430613       --> ..................................................
FY452407       --> ..................................................
FY452728       --> ..................................................
FY449118       --> ..................................................
FY453335       --> ..................................................
EX765731       --> ..................................................
FY433765       --> ..................................................
EW716335       --> CACTGGTTCAGaga....................................
EY913437       --> CACTGGTTCAGGAGAATGAATTCACCGACATGGTGACCCGAGCTTTACAA
EX758055       --> CATTGGTTCAGGAGAATGAATTCATCGACATGGTGACCCGAGCTTTACAA
EX746577       --> ..................................................

               1251   -   1301
UN23543        --> AATGCGCATCAACCGTGAAGCTGAGCGGGGTGGG-CCGTCTATGCGTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- AATGCGCATCAACCGTGAAGCTGAGCAGGGTGGGGCCGTCTATGCGTGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904431       <-- AATGCGCATCAACCGTGAAGCTG-GCGGGGTGGG-CCGTCTATGCGTGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776204       <-- AATGCGCATCAACCGTGAAGCTGAGCAGGGTGGGGCCGTCTATGCGTGGG  Raphanus raphanistrum subsp. landra
FD944743       <-- AATGCGCATCAACCGTGAAGCTGAGCGGGGTGGG-CCGTCTATGCGTGGG  Raphanus sativus cv Early Scarlet Globe
EY909665       <-- AATGCGCATCAACCGTGAAGCTGAGCAGGGTGGGGCCGTCTATGCGTGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928105       <-- AATGCGCATCAACCGTGAAGCTGAGCGGGGTGGG-CCGTCTATGCGTGGG  Raphanus sativus var. oleiformis
FD935114       <-- AATGCGCATCAACAGTGAAGCTGAGCGGGGTGGG-CCGTCTATGCGTGGG  Raphanus sativus var. oleiformis
EY908794       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932357       --> ..................................................  Raphanus sativus var. oleiformis
FD938851       --> ..................................................  Raphanus sativus var. oleiformis
FD949047       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX897729       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD569218       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY430613       --> ..................................................  Raphanus sativus cv GSK3-1
FY452407       --> ..................................................  Raphanus sativus cv GSK3-1
FY452728       --> ..................................................  Raphanus sativus cv GSK3-1
FY449118       --> ..................................................  Raphanus sativus cv GSK3-1
FY453335       --> ..................................................  Raphanus sativus cv GSK3-1
EX765731       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY433765       --> ..................................................  Raphanus sativus cv GSK3-1
EW716335       --> ..................................................  Raphanus sativus var. oleiformis
EY913437       --> AATGCGCATCAACCGTGAAGCTGAGCAGGGTGGGGCCGTCTATGCGTGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX758055       --> AATGCGCATCAACCGTGAAGCTGAGCGGGGTGGG-CCGTCTATGCGTGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX746577       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               1301   -   1351
UN23543        --> GG-TTTCATGTAGAATATGTAGTTAAAACGTAGTTTTGTTCTACTTTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- GG-TTTCATGCAGAATATGTAGTTAAAACGTAGTTTTGTTCTACTTTCAA
EY904431       <-- GG-TTTCATGTAGAATATGTAGTTAAAACGTAGTTTTGTTCTACTTTCGA
EX776204       <-- GG-TTTCATGTAGAATATGTAGTTAAAACGTAGTTTTGTTCTACTTTCAA
FD944743       <-- GG-TTTGATGTAGAATATGTAGTTAAAACGTAGTTTTGTTCTACTTTCAA
EY909665       <-- GG-TTTCATGTAGAATATGTAGTTAAAACGTAGTTTTGTTCTACTTTCAA
EY928105       <-- GG-TTTGATGTAGAATATGTAGTTAAAACGTAGTTTTGTTCTACTTTCAA
FD935114       <-- GG-TTCCATGTAGAATATGTAGTTAAAACGTAGTTTTGTTCTACTTTCAA
EY908794       --> ..................................................
EY932357       --> ..................................................
FD938851       --> ..................................................
FD949047       --> ..................................................
EX897729       --> ..................................................
FD569218       --> ..................................................
FY430613       --> ..................................................
FY452407       --> ..................................................
FY452728       --> ..................................................
FY449118       --> ..................................................
FY453335       --> ..................................................
EX765731       --> ..................................................
FY433765       --> ..................................................
EW716335       --> ..................................................
EY913437       --> GG-TTTCATGTAGAATATGTAGTTAAA-CGTAGTTTTGTTCTACTTTCA-
EX758055       --> GGGTTTCATGTAGAATATGTAGTTAAAACGTAGTTTTGTTCTACTTTCAA
EX746577       --> ..............gTATGTAGTTAAAACGTAGTTTTGTTCTACTTTCAA

               1351   -   1401
UN23543        --> CCACTCTTCTAGCCAAGTGTTATTCTCCA-TGTCTCTTTAAA-CTTCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- CCACTCTTCTAGCCAAGTGTTATTCTCCAATGTCTCTTTAAA-CTTCAAT
EY904431       <-- CCACTCTTCTAGCCAAGTGTTATTCTCCA-TGTCTCTTTAAA-CTTCAAT
EX776204       <-- CCACTCTTCTAGCCAAGTGTTATTCTCCA-TGTCTCTTTAAA-CTTCAAT
FD944743       <-- CCACTCTTCTAGCCAAGTGTTATTCTCCA-TGTCTCTTTAAA-CTCCAAT
EY909665       <-- CCACTCTTCTAGCCAAGTGTTATTCTCCA-TGTCTCTTTAAA-CTTCAAT
EY928105       <-- CCACTCTTCTAGCCAAGTGTTATTCTCCA-TGTCTCTTTAAA-CTCCAAT
FD935114       <-- CCACTCTTCTAGCCAAGTGTTATTCTCCA-TGTCTCTTTAAAACTTCAAT
EY908794       --> ..................................................
EY932357       --> ..................................................
FD938851       --> ..................................................
FD949047       --> ..................................................
EX897729       --> ..................................................
FD569218       --> ..................................................
FY430613       --> ..................................................
FY452407       --> ..................................................
FY452728       --> ..................................................
FY449118       --> ..................................................
FY453335       --> ..................................................
EX765731       --> ..................................................
FY433765       --> ..................................................
EW716335       --> ..................................................
EY913437       --> CCACTCTTCTAGCCAAGTGTTATTCTC-A-TGTCTCTTTAAA-CTTCAAT
EX758055       --> CCACTCTTCTAGCCAAGTGTTATTCTCCA-TGTCTCTTTAAA-CTTCAAT
EX746577       --> CCACTCTTCTAGCCAAGTGTTATTCTCCA-TGTCTCTTTAAA-CTTCAAT

               1401   -   1451
UN23543        --> GAACCTCTTTCTGTTAAACTTAAAGTTATTTTCGTACATACGATGTTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- GAACCTCTTTCTGTT...................................
EY904431       <-- GAACCTCTTTCTGTTAAACTTAAAGTTATTTTCGTACATACGATGTTAAA
EX776204       <-- GAACCTCTTTCTGTTAAACTTAAAGTTATTTTCGTACATACGATGTTAAA
FD944743       <-- GAACCTCTTTCTGTTAAACTTAAAGTTATTTTCGTACATACGATGc....
EY909665       <-- GAACCTCTTTCTATTAAACTTAAAGTTATTTTCGTACATACGATGTT...
EY928105       <-- GAACCTCTTTCCGTTAAACTTAAAGTTATTTTCGT...............
FD935114       <-- GAACCTCTTCCTGTTAAACTAAAAGTTATTTTCGTACATACGATGTT...
EY908794       --> ..................................................
EY932357       --> ..................................................
FD938851       --> ..................................................
FD949047       --> ..................................................
EX897729       --> ..................................................
FD569218       --> ..................................................
FY430613       --> ..................................................
FY452407       --> ..................................................
FY452728       --> ..................................................
FY449118       --> ..................................................
FY453335       --> ..................................................
EX765731       --> ..................................................
FY433765       --> ..................................................
EW716335       --> ..................................................
EY913437       --> GAACCTCTTTCT......................................
EX758055       --> GAACCTCTTTCTGTTAAACTTAAAGTTATTTTCGTACATACGATGTTAAA
EX746577       --> GAACCTCTTTCTATTAAACTTAAAGTTATTTTCGTACATACGATGTTAAA

               1451   -   1501
UN23543        --> ATTACGTTTGATTGTTTCACAAAGCATTTGGAGTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767583       <-- .....................................
EY904431       <-- ATTACGTTTGATcg.......................
EX776204       <-- ATTACGTTTGATTGTTcc...................
FD944743       <-- .....................................
EY909665       <-- .....................................
EY928105       <-- .....................................
FD935114       <-- .....................................
EY908794       --> .....................................
EY932357       --> .....................................
FD938851       --> .....................................
FD949047       --> .....................................
EX897729       --> .....................................
FD569218       --> .....................................
FY430613       --> .....................................
FY452407       --> .....................................
FY452728       --> .....................................
FY449118       --> .....................................
FY453335       --> .....................................
EX765731       --> .....................................
FY433765       --> .....................................
EW716335       --> .....................................
EY913437       --> .....................................
EX758055       --> ATTACGTTTGATTGTTT....................
EX746577       --> ATTACGTTTGATTGTTTCACAAAGCATTTGGAGTTTG