1      -     51
UN23556        --> GGCTCCTCCTCTGACCACGAAGCTCTGGAAA-GCAGGAAGCCGTAAA-CC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438216       <-- ...................................GGAAGCCGTAAAACC
EV531839       <-- ..................................................
EY936535       <-- ..................................................
EX900681       <-- ..................................................
FD575971       <-- ..................................................
EW721100       <-- ..................................................
FD952820       <-- ..................................................
EY909286       <-- ..................................................
FD548003       <-- ..................................................
FD531781       <-- ..................................................
EV540820       <-- ..................................................
EY895098       <-- ..................................................
FD966905       <-- ..................................................
FD573075       <-- ..................................................
EY936000       <-- ..................................................
FD935897       <-- ..................................................
EX759805       <-- ..................................................
EX754843       --> GGCTCCTCCTCTGACCACGAAGCTCTGGAAA-GCAGGAAGCCGTAAA-CC
EY899286       --> GGCTCCTCCTCTGACCACGAAGCTCTGGAAA-GCAGGAAGCCGTAAA-CC
FD536283       --> GGCTCCTCCTCTGACCACGAAGCTCTGGAAA-GCAGGAAGCCGTAAA-CC
FD577427       --> GGCTCCTCCTCTGACCACGAAGCTCTGGAAA-GCAGGAAGCCGTAAA-CC
EW717114       --> ..ggCCTCCTCTGACCACGAAGCTCTGGAAA-GCAGGAAGCCGTAAA-CC
FD568771       --> agggCCTCCTCTGACCACGAAGCTCTGGAAA-GCAGGAAGCCGTAAA-CC
FD572301       --> ...ggCTCCTCTGACCACGAAGCTCTGGAAA-GCAGGAAGCCGTAAA-CC
FD947940       --> ......ggCTCTGACCACGAAGCTCTGGAAA-GCAGGAAGCCGTAAA-CC
FD970579       --> ......ggCTCTGACCACGAAGCTCTGGAAA-GCAGGAAGCCGTAAA-CC
EV527647       --> ..........ggGACCACGAAGCTCTGGAAAAGCAGGAAGCCGTAAAACC
EV536353       --> ..........ggGACCACGAAGCTCTGGAAA-GCAGGAAGCCGTAAA-CC
EX896808       --> ..........ggGACCACGAAGCTCTGGAAA-GCAGGAAGCCGTAAA-CC
EY912967       --> ..........ggGACCACGAATCTCTGGAAAAGCAGGAAGCCGTAAAACC
EY940205       --> ..........ggGACCACGAAGCTCTGGAAA-GCAGGAAGCCGTAAA-CC
EY940839       --> ..........ggGACCACGAAGCTCTGGAAA-GCAGGAAGCCGTAAA-CC
FD552178       --> ..........ggGACCACGAAGCTCTGGAAA-GCAGGAAGCCGTAAA-CC
FD557738       --> ..........ggGACCACGAAGCTCTGGAAA-GCAGGAAGCCGTAAA-CC
FD939879       --> ..........ggGACCACGAAGCTCTGGAAA-GCAGGAAGCCGTAAA-CC
FD957058       --> ..........ggGACCACGAAGCTCTGGAAA-GCAGGAAGCCGTAAA-CC
EW722700       --> ............agggACGAAGCTCTGGAAA-GCAGGAAGCCGTAAA-CC
EX755824       --> .................CGAAGCTCTGGAAA-GCAGGAAGCCGTAAA-CC
FD958303       --> ................ggGAAGCTCTGGAAA-GCAGGAAGCCGTAAA-CC
FY435846       --> .......................TCTGGAAA-GCAGGAAGCCGTAAAACC
EW722699       --> ..................................................

               51     -    101
UN23556        --> TTTTTT--T--CCACCTTCTAGTGTTCTTCGTCGTCGTTTACTGAAACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438216       <-- TTTTCTCCT--CCACCTTCTAGTGTTCTTCGTCGTTGTTAACTGAAACTG
EV531839       <-- ...tctccT--CCACCTTCTAGTGTTCTTCGTCGTTGTTAACTGAAACTG
EY936535       <-- ........T--CCAC-TTCTAGTGTTCTTCGTCGTCGTTTACTGAAACTG
EX900681       <-- ...................TAGTGTTCTTCGTCGTCGTTTACTGAAACTG
FD575971       <-- ...................TAGTGTTCTTCGTCGTCGTTTACTGAAACTG
EW721100       <-- ...............................TCGTCGTTTACTGAAACTG
FD952820       <-- ...............................TCGTCGTTTACTGAAACTG
EY909286       <-- ..................................................
FD548003       <-- ..................................................
FD531781       <-- ..................................................
EV540820       <-- ..................................................
EY895098       <-- ..................................................
FD966905       <-- ..................................................
FD573075       <-- ..................................................
EY936000       <-- ..................................................
FD935897       <-- ..................................................
EX759805       <-- ..................................................
EX754843       --> TTTTTT--T--CCACCTTCTAGTGTTCTTCGTCGTCGTTTACTGAAACTG
EY899286       --> TTTTTT--TTTCCACCTTCTAGTGTTCTTCGTCGTCGTTTACTGAAACTG
FD536283       --> TTTTTT--T-TCCACCTTCTAGTGTTCTTCGTCGTCGTTTACTGAAACTG
FD577427       --> TTTTTT--T--CCACCTTCTAGTGTTCTTCGTCGTCGTTTACTGAAACTG
EW717114       --> TTTTTT--T--CCACCTTCTAGTGTTCTTCGTCGTCGTTTACTGAAACTG
FD568771       --> TTTTTT--T--CCACCTTCTAGTGTTCTTCGTCGTCGTTTACTGAAACTG
FD572301       --> TTTTTT--T--CCACCTTCTAGTGTTCTTCGTCGTCGTTTACTGAAACTG
FD947940       --> TTTTTT--T--CCACCTTCTAGTGTTCTTCGTCGTCGTTTACTGAAACTG
FD970579       --> TTTTTT--T--CCACCTTCTAGTGTTCTTCGTCGTCGTTTACTGAAACTG
EV527647       --> TTTTCTCCT--CCACCTTCTAGTGTTCTTCGTCGTTGTTAACTGAAACTG
EV536353       --> TTTTTT--T--CCACCTTCTAGTGTTCTTCGTCGTCGTTTACTGAAACTG
EX896808       --> TTTTTT--T--CCACCTTCTAGTGTTCTTCGTCGTCGTTTACTGAAACTG
EY912967       --> TTTTCTCCT--CCACCTTCTAGTGTTCTTCGTCGTCGTTTACTGAAACTT
EY940205       --> TTTTTT-----CCACCTTCTAGTGTTCTTCGTCGTCGTTTACTGAAACTG
EY940839       --> TTTTTT--T--CCACCTTCTAGTGTTCTTCGTCGTCGTTTACTGAAACTG
FD552178       --> TTTTTT--T--CCACCTCCTAGTGTTCTTCGTCGTCGTTTACTGAAACTG
FD557738       --> TTTTTT--T--CCACCTTCTAGTGTTCTTCGTCGTCGTTTACTGAAACTG
FD939879       --> TTTTTT--T--CCACCTTCTAGTGTTCTTCGTCGTCGTTTACTGAAACTG
FD957058       --> TTTTTT--T--CCACCTTCTAGTGTTCTTCGTCGTCGTTTACTGAAACTG
EW722700       --> TTTTTT--T--CCACCTTCTAGTGTTCTTCGTCGTCGTTTACTGAAACTG
EX755824       --> TTTTTC--T--CCACCTTCTAGTGTTCTTCGTCGTCGTTTACTGAAACTG
FD958303       --> TTTTTT--T--CCACCTTCTAGTGTTCTTCGTCGTCGTTTACTGAAACTG
FY435846       --> TTTTCTCCT--CCACCTTCTAGTGTTCTTCGTCGTTGTTAACTGAAACTG
EW722699       --> .............ACCTTCTAGTGTTCTTCGTCGTCGTTTACTGAAACTG

               101    -    151
UN23556        --> CCAAGATGTTCTCTGCTCAGAACAAGATCCACAAGGATAAGGGTGTTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438216       <-- CCAAGATGTTCTCTGCACAGAACAAGATCCACAAGGATAAGGGTGTTCCA  Raphanus sativus cv GSK3-1
EV531839       <-- CCAAGATGTTCTCTGCACAGAACAAGATCCACAAGGATAAGGGTGTTCCA  Raphanus raphanistrum subsp. maritimus
EY936535       <-- CCAAGATGTTCTCTGCTCAGAACAAGATCCACAAGGATAAGGGTGTTGCA  Raphanus sativus cv Early Scarlet Globe
EX900681       <-- CCAAGATGTTCTCTGCTCAGAACAAGATCCACAAGGATAAGGGTGTTGCA  Raphanus sativus cv Early Scarlet Globe
FD575971       <-- CCAAGATGTTCTCTGCTCAGAACAAGATCCACAAGGATAAGGGTGTTGCA  Raphanus sativus cv Early Scarlet Globe
EW721100       <-- CCAAGATGTTCTCTGCTCAGAACAAGATCCACAAGGATAAGGGTGTTGCA  Raphanus sativus var. oleiformis
FD952820       <-- CCAAGATGTTCTCTGCTCAGAACAAGATCCACAAGGATAAGGGTGTTGCA  Raphanus sativus cv Rat-Tail Radish #3870
EY909286       <-- ....GATGTTCTCTGCTCATAACAAGATCCACAAGGATAAGGGTGTTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548003       <-- ...................GAACAAGACCCACAAGGATAAGGGTGTTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD531781       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV540820       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895098       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD966905       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD573075       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY936000       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD935897       <-- ..................................................  Raphanus sativus var. oleiformis
EX759805       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754843       --> CCAAGATGTTCTCTGCTCAGAACAAGATCCACAAGGATAAGGGTGTTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899286       --> CCAAGATGTTCTCTGCTCAGAACAAGATCCACAAGGATAAGGGTGTTGCA  Raphanus raphanistrum subsp. maritimus
FD536283       --> CCAAGATGTTCTCTGCTCAGAACAAGATCCACAAGGATAAGGGTGTTGCA  Raphanus raphanistrum subsp. maritimus
FD577427       --> CCAAGATGTTCTCTGCTCAGAACAAGATCCACAAGGATAAGGGTGTTGCA  Raphanus sativus cv Rat-Tail Radish #3870
EW717114       --> CCAAGATGTTCTCTGCTCAGAACAAGATCCACAAGGATAAGGGTGTTGCA  Raphanus sativus var. oleiformis
FD568771       --> CCAAGATGTTCTCTGCTCAGAACAAGATCCACAAGGATAAGGGTGTTGCA  Raphanus sativus cv Early Scarlet Globe
FD572301       --> CCAAGATGTTCTCTGCTCAGAACAAGATCCACAAGGATAAGGGTGTTGCA  Raphanus sativus cv Early Scarlet Globe
FD947940       --> CCAAGACGTTCTCTGCTCAGAACAAGATCCACAAGGATAAGGGTGTTGCA  Raphanus sativus cv Early Scarlet Globe
FD970579       --> CCAAGATGTTCTCTGCTCAGAACAAGATCCACAAGGATAAGGGTGTTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV527647       --> CCAAGATGTTCTCTGCACAGAACAAGATCCACAAGGATAAGGGTGTTCCA  Raphanus raphanistrum subsp. maritimus
EV536353       --> CCAAGATGTTCTCTGCTTAGAACAAGATCCACAAGGATAAGGGTGTTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX896808       --> CCAAGATGTTCTCTGCTCAGAACAAGATCCACAAGGATAAGGGTGTTGCA  Raphanus sativus cv Early Scarlet Globe
EY912967       --> CCAAGATGTTCTCTGCTCATAACAAGATCCACAAGGATAAGGGTGTTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940205       --> CCAAGATGTTCTCTGCTCAGAACAAGATCCACAAGGATAAGGGTGTTGCA  Raphanus sativus cv Early Scarlet Globe
EY940839       --> CCAAGATGTTCTCTGCTCAGAACAAGATCCACAAGGATAAGGGTGTTGCA  Raphanus sativus cv Early Scarlet Globe
FD552178       --> CCAAGATGTTCTCTGCTCAGAACAAGACCCACAAGGATAAGGGTGTTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557738       --> CCAAGATGTTCTCTGCACAGAACAAGATCCACAAGGATAAGGGTGTTCCA  Raphanus raphanistrum subsp. landra
FD939879       --> CCAAGATGTTCTCTGCTCAGAACAAGATCCACAAGGATAAGGGTATTGCA  Raphanus sativus var. oleiformis
FD957058       --> CCAAGATGTTCTCTGCTCAGAACAAGATCCACAAGGATAAGGGTGTTGCA  Raphanus sativus cv Rat-Tail Radish #3870
EW722700       --> CCAAGATGTTCTCTGCTCAGAACAAGATCCACAAGGATAAGGGTGTTGCA  Raphanus sativus cv Early Scarlet Globe
EX755824       --> CCAAGATGTTCTCTGCTCAGAACAAGATCCACAAGGATAAGGGTGTTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD958303       --> CCAAGATGTTCTCTGCTCAGAACAAGATCCACAAGGATAAGGGTGTTGCA  Raphanus sativus cv Rat-Tail Radish #3870
FY435846       --> CCAAGATGTTCTCTGCACAGAACAAGATCCACAAGGATAAGGGTGTTCCA  Raphanus sativus cv GSK3-1
EW722699       --> CCAAGATGTTCTCTGCTCAGAACAAGATCCACAAGGATAAGGGTGTTGCA  Raphanus sativus cv Early Scarlet Globe

               151    -    201
UN23556        --> CCAACTGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATTTGGAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438216       <-- CCAACTGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATTTGGAGAA  Raphanus sativus cv GSK3-1
EV531839       <-- CCAACTGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATTTGGAGAA  Raphanus raphanistrum subsp. maritimus
EY936535       <-- CCAACTGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATTTGGAGAA  Raphanus sativus cv Early Scarlet Globe
EX900681       <-- CCAACTGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATTTGGAGAA  Raphanus sativus cv Early Scarlet Globe
FD575971       <-- CCAACTGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATTTGGAGAA  Raphanus sativus cv Early Scarlet Globe
EW721100       <-- CCAACTGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATTTGGAGAA  Raphanus sativus var. oleiformis
FD952820       <-- CCAACTGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATTTGGAGAA  Raphanus sativus cv Rat-Tail Radish #3870
EY909286       <-- CCAACTGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATTTGGAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548003       <-- CCAACTGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATTTGGAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD531781       <-- ...................................CTTTGATCTGGAGAA  Raphanus raphanistrum subsp. maritimus
EV540820       <-- ....................................TTTGATCTGGAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895098       <-- ......................................TGATCTGGAGAA  Raphanus raphanistrum subsp. maritimus
FD966905       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD573075       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY936000       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD935897       <-- ..................................................  Raphanus sativus var. oleiformis
EX759805       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754843       --> CCAACCGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATCTGGAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899286       --> CCAACCGAGTTTGAAGAGCGAGTTGCTCAGGCTTTCTTTGATCTGGAGAA  Raphanus raphanistrum subsp. maritimus
FD536283       --> CCAACCGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATCTGGAGAA  Raphanus raphanistrum subsp. maritimus
FD577427       --> CCAACTGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGACTTGGAGAA  Raphanus sativus cv Rat-Tail Radish #3870
EW717114       --> CCAACTGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATTTGGAGAA  Raphanus sativus var. oleiformis
FD568771       --> CCAACTGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATTTGGAGAA  Raphanus sativus cv Early Scarlet Globe
FD572301       --> CCAACTGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATTTGGAGAA  Raphanus sativus cv Early Scarlet Globe
FD947940       --> CCAACTGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATTTGGAGAA  Raphanus sativus cv Early Scarlet Globe
FD970579       --> CCAACCGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATCTGGAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV527647       --> CCAACTGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATTTGGAGAA  Raphanus raphanistrum subsp. maritimus
EV536353       --> CCAACCGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATCTGGAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX896808       --> CCAACTGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATTTGGAGAA  Raphanus sativus cv Early Scarlet Globe
EY912967       --> CCAACTGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATTTGGAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940205       --> CCAACTGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATTTGGAGAA  Raphanus sativus cv Early Scarlet Globe
EY940839       --> CCAACTGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATTTGGAGAA  Raphanus sativus cv Early Scarlet Globe
FD552178       --> CCAACTGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATTTGGAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557738       --> CCAACTGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATTTGGAGAA  Raphanus raphanistrum subsp. landra
FD939879       --> CCAACTGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATTTGGAGAA  Raphanus sativus var. oleiformis
FD957058       --> CCAACTGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATTTGGAGAA  Raphanus sativus cv Rat-Tail Radish #3870
EW722700       --> CCAACTGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATTTGGAGAA  Raphanus sativus cv Early Scarlet Globe
EX755824       --> CCAACCGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATCTGGAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD958303       --> CCAACTGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGACTTGGAGAA  Raphanus sativus cv Rat-Tail Radish #3870
FY435846       --> CCAACTGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATTTGGAGAA  Raphanus sativus cv GSK3-1
EW722699       --> CCAACTGAGTTTGAGGAGCGAGTTGCTCAGGCTTTCTTTGATTTGGAGAA  Raphanus sativus cv Early Scarlet Globe

               201    -    251
UN23556        --> CACCAATCAGGAGTTGAAAAGTGACTTGAAAGATCTCTACATTAACCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438216       <-- CACCAATCAGGAGTTGAAAAGTGATTTGAAAGATCTCTACATTAACCAAG  Raphanus sativus cv GSK3-1
EV531839       <-- CACCAATCAGGAGTTGAAAAGTGATTTGAAAGATCTCTACATTAACCAAG  Raphanus raphanistrum subsp. maritimus
EY936535       <-- CACCAATCAGGAGTTGAAAAGTGACTTGAAAGATCTATACATTGACCAAG  Raphanus sativus cv Early Scarlet Globe
EX900681       <-- CACCAATCAGGAGTTGAAAAGTGACTTGAAAGATCTCTACATTAACCAAG  Raphanus sativus cv Early Scarlet Globe
FD575971       <-- CACCAATCAGGAGTTGAAAAGTGACTTGAAAGATCTCTACATTAACCAAG  Raphanus sativus cv Early Scarlet Globe
EW721100       <-- CACCAATCAGGAGTTGAAAAGTGACTTGAAAGATCTATACATTAACCAAG  Raphanus sativus var. oleiformis
FD952820       <-- CACCAATCAGGAGTTGAAAAGTGACTTGAAAGATCTATACATTAACCAAG  Raphanus sativus cv Rat-Tail Radish #3870
EY909286       <-- CACCAATCAGGAGTTGAAAAGTGACTTGAAAGATCTCTACATTAACCAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548003       <-- CACCAATCAGGAGTTGAAAAGTGACTTGAAAGATCTCTACATTAACCAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD531781       <-- CACCAACCAGGAGTTGAAAAGTGACTTGAAAGATCTCTACATTAACCAAG  Raphanus raphanistrum subsp. maritimus
EV540820       <-- CACCAACCAGGAGTTGAAAAGTGACTTGAAAGATCTCTACATTAACCAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895098       <-- CACCAACCAGGAGTTGAAAAGTGACTTGAAAGATCTCTACATTAACCAAG  Raphanus raphanistrum subsp. maritimus
FD966905       <-- .ACCAACCAGGAGTTGAAAAGTGACTTGAAAGATCTCTACATTAACCAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD573075       <-- ........................................ATTAACCAAG  Raphanus sativus cv Early Scarlet Globe
EY936000       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD935897       <-- ..................................................  Raphanus sativus var. oleiformis
EX759805       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754843       --> CACCAACCAGGAGTTGAAAAGTGACTTGAAAGATCTCTACATTAACCAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899286       --> CACCAACCAGGAGTTGAAAAGTGACTTGAAAGATCTCTACATTAACCAAG  Raphanus raphanistrum subsp. maritimus
FD536283       --> CACCAACCAGGAGTTGAAAAGTGACTTGAAAGATCTCTACATTAACCAAG  Raphanus raphanistrum subsp. maritimus
FD577427       --> CACCAATCAGGAGTTGAAAAGTGACTTGAAAGATCTCTACATTAACCAAG  Raphanus sativus cv Rat-Tail Radish #3870
EW717114       --> CACCAATCAGGAGTTGAAAAGTGACTTGAAAGATCTATACATTAACCAAG  Raphanus sativus var. oleiformis
FD568771       --> CACCAATCAGGAGTTGAAAAGTGACTTGAAAGATCTCTACATTAACCAAG  Raphanus sativus cv Early Scarlet Globe
FD572301       --> CACCAATCAGGAGTTGAAAAGTGACTTGAAAGATCTCTACATTAACCAAG  Raphanus sativus cv Early Scarlet Globe
FD947940       --> CACCAATCAGGAGTTGAAAAGTGACTTGAAAGATCTCTACATTAACCAAG  Raphanus sativus cv Early Scarlet Globe
FD970579       --> CACCAACCAGGAGTTGAAAAGTGACTTGAAAGATCTCTACATTAACCAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV527647       --> CACCAATCAGGAGTTGAAAAGTGATTTGAAAGATCTCTACATTAACCAAG  Raphanus raphanistrum subsp. maritimus
EV536353       --> CACCAACCAGGAGTTGAAAAGTGACTTGAAAGATCTCTACATTAACCAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX896808       --> CACCAATCAGGAGTTGAAAAGTGACTTGAAAGATCTCTACATTAACCAAG  Raphanus sativus cv Early Scarlet Globe
EY912967       --> CACCAATCAGGAGTTGAAAAGTGACTTGAAAGATCTCTACATTAACCAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940205       --> CACCAATCAGGAGTTGAAAAGTGACTTGAAAGATCTCTACATTAACCAAG  Raphanus sativus cv Early Scarlet Globe
EY940839       --> CACCAATCAGGAGTTGAAAAGTGACTTGAAAGATCTATACATTGACCAAG  Raphanus sativus cv Early Scarlet Globe
FD552178       --> CACCAATCAGGAGTTGAAAAGTGACTTGAAAGATCTCTACATTAACCAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557738       --> CACCAATCAGGAGTTGAAAAGTGACTTGAAAGATCTCTACATTAACCAAG  Raphanus raphanistrum subsp. landra
FD939879       --> CACCAATCAGGAGTCGAAAAGTGACTTGAAAGATCTATACATTAACCAAG  Raphanus sativus var. oleiformis
FD957058       --> CACCAATCAGGAGTTGAAAAGTGACTTGAAAGATCTATACATTAACCAAG  Raphanus sativus cv Rat-Tail Radish #3870
EW722700       --> CACCAATCAGGAGTTGAAAAGTGACTTGAAAGATCTATACATTAACCAAG  Raphanus sativus cv Early Scarlet Globe
EX755824       --> CACCAACCAGGAGTTGAAAAGTGACTTGAAAGATCTCTACATTAACCAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD958303       --> CACCAATCAGGAGTTGAAAAGTGACTTGAAAGATCTCTACATTAACCAAG  Raphanus sativus cv Rat-Tail Radish #3870
FY435846       --> CACCAATCAGGAGTTGAAAAGTGATTTGAAAGATCTCTACATTAACCAAG  Raphanus sativus cv GSK3-1
EW722699       --> CACCAATCAGGAGTTGAAAAGTGACTTGAAAGATCTATACATTAACCAAG  Raphanus sativus cv Early Scarlet Globe

               251    -    301
UN23556        --> CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTACGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438216       <-- CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTACGTT  Raphanus sativus cv GSK3-1
EV531839       <-- CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTACGTT  Raphanus raphanistrum subsp. maritimus
EY936535       <-- CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTACGTT  Raphanus sativus cv Early Scarlet Globe
EX900681       <-- CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTACGTT  Raphanus sativus cv Early Scarlet Globe
FD575971       <-- CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTACGTT  Raphanus sativus cv Early Scarlet Globe
EW721100       <-- CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTACGTT  Raphanus sativus var. oleiformis
FD952820       <-- CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTACGTT  Raphanus sativus cv Rat-Tail Radish #3870
EY909286       <-- CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTACGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548003       <-- CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTACGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD531781       <-- CTGTTTCGATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTATGTT  Raphanus raphanistrum subsp. maritimus
EV540820       <-- CTGTTTCGATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTATGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895098       <-- CTGTTTCGATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTATGTT  Raphanus raphanistrum subsp. maritimus
FD966905       <-- CTGTTTCGATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTATGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD573075       <-- CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTACGTT  Raphanus sativus cv Early Scarlet Globe
EY936000       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD935897       <-- ..................................................  Raphanus sativus var. oleiformis
EX759805       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754843       --> CTGTTTCGATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTATGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899286       --> CTGTTTCGATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTATGTT  Raphanus raphanistrum subsp. maritimus
FD536283       --> CTGTTTCGATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTATGTT  Raphanus raphanistrum subsp. maritimus
FD577427       --> CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTACTTT  Raphanus sativus cv Rat-Tail Radish #3870
EW717114       --> CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTACGTT  Raphanus sativus var. oleiformis
FD568771       --> CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTACGTT  Raphanus sativus cv Early Scarlet Globe
FD572301       --> CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTACGTT  Raphanus sativus cv Early Scarlet Globe
FD947940       --> CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTACGTT  Raphanus sativus cv Early Scarlet Globe
FD970579       --> CTGTTTCGATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTATGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV527647       --> CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTACGTT  Raphanus raphanistrum subsp. maritimus
EV536353       --> CTGTTTCGATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTATGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX896808       --> CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTACGTT  Raphanus sativus cv Early Scarlet Globe
EY912967       --> CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTACGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940205       --> CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTACGTT  Raphanus sativus cv Early Scarlet Globe
EY940839       --> CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTACGTT  Raphanus sativus cv Early Scarlet Globe
FD552178       --> CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTACGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557738       --> CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTACGTT  Raphanus raphanistrum subsp. landra
FD939879       --> CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTACGTT  Raphanus sativus var. oleiformis
FD957058       --> CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTACGTT  Raphanus sativus cv Rat-Tail Radish #3870
EW722700       --> CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTACGTT  Raphanus sativus cv Early Scarlet Globe
EX755824       --> CTGTTTCGATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTATGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD958303       --> CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTACGTT  Raphanus sativus cv Rat-Tail Radish #3870
FY435846       --> CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGATCTACGTT  Raphanus sativus cv GSK3-1
EW722699       --> CTGTTTCAATGGATATTGCTGGCAACCGCAAGGCTGTTGTGAACTACGTT  Raphanus sativus cv Early Scarlet Globe

               301    -    351
UN23556        --> CCATTCAGACTGAGGAAAGCTTTCCGCAAGATCCATCCTCGTCTCGTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438216       <-- CCATTCAGACTGAGGAAAGCTTTCCGCAAGATCCATCCTCGTCTCGTCAG  Raphanus sativus cv GSK3-1
EV531839       <-- CCATTCAGACTGAGGAAAGCTTTCCGCAAGATCCATCCTCGTCTCGTCAG  Raphanus raphanistrum subsp. maritimus
EY936535       <-- CCATTCAGACTGAGGAAAGCTTTCCGCAAGATCCATCCTCGTCTCGTCAG  Raphanus sativus cv Early Scarlet Globe
EX900681       <-- CCATTCAGACTGAGGAAAGCTTTCCGCAAGATCCATCCTCGTCTCGTCAG  Raphanus sativus cv Early Scarlet Globe
FD575971       <-- CCATTCAGACTGAGGAAAGCTTTCCGCAAGATCCATCCTCGTCTCGTCAG  Raphanus sativus cv Early Scarlet Globe
EW721100       <-- CCATTCAGACTGAGGAAAGCTTTCCGCAAGATCCATCCTCGTCTCGTCAG  Raphanus sativus var. oleiformis
FD952820       <-- CCATTCAGACTGAGGAAAGCTTTCCGCAAGATCCATCCTCGTCTCGTCAG  Raphanus sativus cv Rat-Tail Radish #3870
EY909286       <-- CCATTCAGACTGAGGAAAGCCTTCCGCAAGATCCATCCTCGTCTTGTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548003       <-- CCATTCAGACTGAGGAAAGCTTTCCGTAAGATCCATCCTCGTCTCGTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD531781       <-- CCATTCAGACTGAGGAAAGCCTTCCGCAAGATCCATCCTCGTCTTGTCAG  Raphanus raphanistrum subsp. maritimus
EV540820       <-- CCATTCAGACTGAGGAAAGCCTTCCGCAAGATCCATCCTCGTCTTGTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895098       <-- CCATTCAGACTGAGGAAAGCCTTCCGCAAGATCCATCCTCGTCTTGTCAG  Raphanus raphanistrum subsp. maritimus
FD966905       <-- CCATTCAGACTGAGGAAAGCCTTCCGCAAGATCCATCCTCGTCTTGTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD573075       <-- CCATTCAGACTGAGGAAAGCTTTCCGCAAGATCCATCCTCGTCTCGTCAG  Raphanus sativus cv Early Scarlet Globe
EY936000       <-- ..............................................TCAG  Raphanus sativus cv Early Scarlet Globe
FD935897       <-- ..................................................  Raphanus sativus var. oleiformis
EX759805       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754843       --> CCATTCAGACTGAGGAAAGCCTTCCGCAAGATCCATCCTCGTCTTGTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899286       --> CCATTCAGACTGAGGAAAGCCTTCCGCAAGATCCATCCTCGTCTTGTCAG  Raphanus raphanistrum subsp. maritimus
FD536283       --> CCATTCAGACTGAGGAAAGCCTTCCGCAAGATCCATCCTCGTCTTGTCAG  Raphanus raphanistrum subsp. maritimus
FD577427       --> CCATTCAGACTGAGGAAAGCCTTCCGCAAGATCCATCCTCGTCTCGTCAG  Raphanus sativus cv Rat-Tail Radish #3870
EW717114       --> CCATTCAGACTGAGGAAAGCTTTCCGCAAGATCCATCCTCGTCTCGTCAG  Raphanus sativus var. oleiformis
FD568771       --> CCATTCAGACTGAGGAAAGCTTTCCGCAAGATCCATCCTCGTCTCGTCAG  Raphanus sativus cv Early Scarlet Globe
FD572301       --> CCATTCAGACTGAGGAAAGCTTTCCGCAAGATCCATCCTCGTCTCGTCAG  Raphanus sativus cv Early Scarlet Globe
FD947940       --> CCATTCAGACTGAGGAAAGCTTTCCGCAAGATCCATCCTCGTCTCGTCAG  Raphanus sativus cv Early Scarlet Globe
FD970579       --> CCATTCAGACTGAGGAAAGCCTTCCGCAAGATCCATCCTCGTCTTGTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV527647       --> CCATTCAGACTGAGGAAAGCTTTCCGCAAGATCCATCCTCGTCTCGTCAG  Raphanus raphanistrum subsp. maritimus
EV536353       --> CCATTCAGACTGAGGAAAGCCTTCCGCAAGATCCATCCTCGTCTTGTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX896808       --> CCATTCAGACTGAGGAAAGCTTTCCGCAAGATCCATCCTCGTCTCGTCAG  Raphanus sativus cv Early Scarlet Globe
EY912967       --> CCATTCAGACTGAGGAAAGCCTTCCGCAAGATCCATCCTCGTCTTGTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940205       --> CCATTCAGACTGAGGAAAGCTTTCCGCAAGATCCATCCTCGTCTCGTCAG  Raphanus sativus cv Early Scarlet Globe
EY940839       --> CCATTCAGACTGAGGAAAGCTTTCCGCAAGATCCATCCTCGTCTCGTCAG  Raphanus sativus cv Early Scarlet Globe
FD552178       --> CCATTCAGACTGAGGAAAGCTTTCCGTAAGATCCATCCTCGTCTCGTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557738       --> CCATTCAGACTGAGGAAAGCTTTCCGCAAGATCCATCCTCGTCTCGTCAG  Raphanus raphanistrum subsp. landra
FD939879       --> CCATTCAGACTGAGGAAAGCTTTCCGCAAGATCCATCCTCGTCTCGTCAG  Raphanus sativus var. oleiformis
FD957058       --> CCATTCAGACTGAGGAAAGCTTTCCGCAAGATCCATCCTCGTCTCGTCAG  Raphanus sativus cv Rat-Tail Radish #3870
EW722700       --> CCATTCAGACTGAGGAAAGCTTTCCGCAAGATCCATCCTCGTCTCGTCAG  Raphanus sativus cv Early Scarlet Globe
EX755824       --> CCATTCAGACTGAGGAAAGCCTTCCGCAAGATCCATCCTCGTCTTGTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD958303       --> CCATTCAGACTGAGGAAAGCCTTCCGCAAGATCCATCCTCGTCTCGTCAG  Raphanus sativus cv Rat-Tail Radish #3870
FY435846       --> CCATTCAGACTGAGGAAAGCTTTCCGCAAGATCCATCCTCGTCTCGTCAG  Raphanus sativus cv GSK3-1
EW722699       --> CCATTCAGACTGAGGAAAGCTTTCCGCAAGATCCATCCTCGTCTCGTCAG  Raphanus sativus cv Early Scarlet Globe

               351    -    401
UN23556        --> AGAACTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438216       <-- AGAACTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus sativus cv GSK3-1
EV531839       <-- AGAACTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus raphanistrum subsp. maritimus
EY936535       <-- AGAACTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus sativus cv Early Scarlet Globe
EX900681       <-- AGAACTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus sativus cv Early Scarlet Globe
FD575971       <-- AGAACTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus sativus cv Early Scarlet Globe
EW721100       <-- AGAACTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus sativus var. oleiformis
FD952820       <-- AGAACTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus sativus cv Rat-Tail Radish #3870
EY909286       <-- ATAGCTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548003       <-- AGAACTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD531781       <-- AGAGCTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus raphanistrum subsp. maritimus
EV540820       <-- AGAGCTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCTACCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895098       <-- AGAGCTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus raphanistrum subsp. maritimus
FD966905       <-- AGAGCTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCTACCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD573075       <-- AGAACTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus sativus cv Early Scarlet Globe
EY936000       <-- AGAACTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus sativus cv Early Scarlet Globe
FD935897       <-- .......GAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus sativus var. oleiformis
EX759805       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754843       --> AGAGCTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCTACCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899286       --> AGAGCTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus raphanistrum subsp. maritimus
FD536283       --> AGAGCTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus raphanistrum subsp. maritimus
FD577427       --> AGAACTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTACCACCA  Raphanus sativus cv Rat-Tail Radish #3870
EW717114       --> AGAACTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus sativus var. oleiformis
FD568771       --> AGAACTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus sativus cv Early Scarlet Globe
FD572301       --> AGAACTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus sativus cv Early Scarlet Globe
FD947940       --> AGAACTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus sativus cv Early Scarlet Globe
FD970579       --> AGAGCTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCTACCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV527647       --> AGAACTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus raphanistrum subsp. maritimus
EV536353       --> AGAGCTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCTACCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX896808       --> AGAACTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus sativus cv Early Scarlet Globe
EY912967       --> ATAGCTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940205       --> AGAACTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus sativus cv Early Scarlet Globe
EY940839       --> AGAACTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus sativus cv Early Scarlet Globe
FD552178       --> AGAACTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557738       --> AGAACTCGAGAAGAAGTTCAGTTGTAACGATGTTATCTTTGTTGCCACCA  Raphanus raphanistrum subsp. landra
FD939879       --> AGAACTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus sativus var. oleiformis
FD957058       --> AGAACTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus sativus cv Rat-Tail Radish #3870
EW722700       --> AGAACTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus sativus cv Early Scarlet Globe
EX755824       --> AGAGCTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCTACCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD958303       --> AGAACTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus sativus cv Rat-Tail Radish #3870
FY435846       --> AGAACTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus sativus cv GSK3-1
EW722699       --> AGAACTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCA  Raphanus sativus cv Early Scarlet Globe

               401    -    451
UN23556        --> GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438216       <-- GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
EV531839       <-- GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
EY936535       <-- GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
EX900681       <-- GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
FD575971       <-- GAAGAATCATGCGTCCTCCTAAGAAAGGCTTTGCTGTTCAGAGACCACGC
EW721100       <-- GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
FD952820       <-- GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
EY909286       <-- GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
FD548003       <-- GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
FD531781       <-- GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
EV540820       <-- GAAGAATCATGCGTCCTCCTAAGAAAGGCTTTGCTGTTCAGAGACCACGC
EY895098       <-- GAAGAATCATGCGTCCTCCTAATAAAGGCTTTGCTGTTCAGAGACCACGC
FD966905       <-- GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
FD573075       <-- GAAGAATCATGCGTCCTCCTAAGAAAGGTTTTGCTGTTCAGAGACCACGC
EY936000       <-- GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
FD935897       <-- GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
EX759805       <-- ..................................TGTTCAGAGACCACGC
EX754843       --> GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
EY899286       --> GAAGAATCATGCGTCCTCCTAATAAAGGCTCTGCTGTTCAGAGACCACGC
FD536283       --> GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
FD577427       --> GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCATGT
EW717114       --> GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
FD568771       --> GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
FD572301       --> GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
FD947940       --> GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
FD970579       --> GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
EV527647       --> GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
EV536353       --> GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
EX896808       --> GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
EY912967       --> GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
EY940205       --> GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
EY940839       --> GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
FD552178       --> GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
FD557738       --> GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
FD939879       --> GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
FD957058       --> GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
EW722700       --> GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
EX755824       --> GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC
FD958303       --> GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGT
FY435846       --> GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACG.
EW722699       --> GAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTGTTCAGAGACCACGC

               451    -    501
UN23556        --> AACAGGACTCTCACTTCCGTCCACGAAGCCATGCTTGAGGATGTCGCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438216       <-- AACAGGACTCTCACTTCCGTCCATGAAGCCATGCTTGAGGATGTCGCCTA  Raphanus sativus cv GSK3-1
EV531839       <-- AACAGGACTCTCACTTCCGTCCATGAAGCCATGCTTGAGGATGTCGCCTA  Raphanus raphanistrum subsp. maritimus
EY936535       <-- AACAGGACTCTCACTTCCGTCC--AAAGCCATGCTTGAGGATGTCGCTTA  Raphanus sativus cv Early Scarlet Globe
EX900681       <-- AACAGGACTCTCACTTCCGTCCACGAAGCCATGCTTGAGGATGTCGCCTA  Raphanus sativus cv Early Scarlet Globe
FD575971       <-- AACAGGACTCTCACTTCCGTCCACGAAGCCATGCTTGAGGATGTCGCCTA  Raphanus sativus cv Early Scarlet Globe
EW721100       <-- AACAGGACTCTCACTTCCGTCCATGAAGCCATGCTTGAGGATGTCGCTTA  Raphanus sativus var. oleiformis
FD952820       <-- AACAGGACTCTCACTTCCGTCCATGAAGCCATGCTTGAGGATGTCGCTTA  Raphanus sativus cv Rat-Tail Radish #3870
EY909286       <-- AACAGGACTCTCACTTCCGTCCACGAAGCCATGCTTGAGGATGTCGCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548003       <-- AACAGGACTCTCACTTCCGTCCACGAAGCCATGCTTGAGGATGTCGCCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD531781       <-- AACAGGACTCTCACTTCCGTCCATGAAGCCATGCTTGAGGATGTCGCTTA  Raphanus raphanistrum subsp. maritimus
EV540820       <-- AACAGGACTCTCACTTCCGTCCACGAAGCCGTGCTTGAGGATGTCGCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895098       <-- AACAGGACTCTCACTTCCGTCCATGAAGCCATGCTTTAGGATGTCGCTTA  Raphanus raphanistrum subsp. maritimus
FD966905       <-- AACAGGACTCTCACTTCCGTCCACGAAGCCATGCTTGAGGATGTCGCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD573075       <-- AACAGGACTCTCACTTCCGTCCACGAAGCCATGCTTGAGGATGTCGCCTA  Raphanus sativus cv Early Scarlet Globe
EY936000       <-- AACAGGACTCTCACTTCCGTCCACGAAGCCATGCTTGAGGATGTCGCCTA  Raphanus sativus cv Early Scarlet Globe
FD935897       <-- AACAGGACTCTCACTTCCGTCCATGAAGCCATGCTTGAGGATGTCGCTTA  Raphanus sativus var. oleiformis
EX759805       <-- AACAGGACTCTCACTTCCGTCCACGAAGCCATGCTTGAGGATGTCGCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754843       --> AACAGGGCTCTCACTTCCGTCCACGAAGCCATGCTTGAGGATGTCGCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899286       --> AACAGGACTCTCACTTCCGTCCATGAAGCCATGCTTTAGGATGTCGCTTA  Raphanus raphanistrum subsp. maritimus
FD536283       --> AACAGGACTCTCACTTCCGTCCATGAAGCCATGCTTGAGGATGTCGCTTA  Raphanus raphanistrum subsp. maritimus
FD577427       --> AACAGGACTCTCACTTCCGTCCATGAAGCCATGCTTGAGGATGTCGCCTA  Raphanus sativus cv Rat-Tail Radish #3870
EW717114       --> AACAGGACTCTCACTTCCGTCCATGAAGCCATGCTTGAGGATGTCGCTTA  Raphanus sativus var. oleiformis
FD568771       --> AACAGGACTCTCACTTCCGTCCACGAAGCCATGCTTGAGGATGTCGCCTA  Raphanus sativus cv Early Scarlet Globe
FD572301       --> AACACGACTCTCACTTCCGTCCACGAAGCCATGCTTGAG-ATGTCGCCTA  Raphanus sativus cv Early Scarlet Globe
FD947940       --> AACAGGACTCTCACTTCCGTCCACGAAGCCATGCTTGAGGATGTCGCCTA  Raphanus sativus cv Early Scarlet Globe
FD970579       --> AACAGGACTCTCACTTCCGTCCACGAAGCCATGCTTGAGGATGTCGCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV527647       --> AACAGGACTCTCACTTCCGTCCATGAAGCCATGCTTGAGGATGTCGCCTA  Raphanus raphanistrum subsp. maritimus
EV536353       --> AACAGGACTCTCACTTCCGTCCACGAAGCCGTGCTTGAGGATGTCGCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX896808       --> AACAGGACTCTCACTTCCGTCCACGAAGCCATGCTTGAGGATGTCGCCTA  Raphanus sativus cv Early Scarlet Globe
EY912967       --> AACAGGACTCTCACTTCCGTCCACGAAGCCATGCTTGAGGATGTCGCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940205       --> AACAGGACTCTCACTTCCGTCCACGAAGCCATGCTTGAGGATGTCGCCTA  Raphanus sativus cv Early Scarlet Globe
EY940839       --> AACAGGACTCTCACTTCCGTCCA--AAGCCATGCTTGAGGATGTCGCTTA  Raphanus sativus cv Early Scarlet Globe
FD552178       --> AACAGGACTCTCACTTCCGTCCACGAAGCCATGCTTGAGGATGTCGCCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557738       --> AACAGGACTCTCACTTCCGTCCATGAAGCCGTGCTTGAGGATGTCGCTTA  Raphanus raphanistrum subsp. landra
FD939879       --> AACAGGACTCTCACTTCCGTCCATGAAGCCATGCTTGAGGATGTCGCTTA  Raphanus sativus var. oleiformis
FD957058       --> AACAGGACTCTCACTTCCGTCCATGAAGCCATGCTTGAGGATGTCGCTTA  Raphanus sativus cv Rat-Tail Radish #3870
EW722700       --> AACAGGACTCTCACTTCCGTCCATGAAGCCATGCTTGAGGATGTCGCTTA  Raphanus sativus cv Early Scarlet Globe
EX755824       --> AACAGGACTCTCACTTCCGTCCACGAAGCCATGCTTGAGGATGTCGCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD958303       --> AACAGGACTCTCACTTCCGTCCATGAAGCCATGCTTGAGGATGTCGCCTA  Raphanus sativus cv Rat-Tail Radish #3870
FY435846       --> ..................................................  Raphanus sativus cv GSK3-1
EW722699       --> AACAGGACTCTCACTTCCGTCCATGAAGCCATGCTTGAGGATGTCGCTTA  Raphanus sativus cv Early Scarlet Globe

               501    -    551
UN23556        --> CCCTGCTGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438216       <-- CCCTGCGGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
EV531839       <-- CCCTGCGGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
EY936535       <-- CCCTGCTGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
EX900681       <-- CCCTGCGGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
FD575971       <-- CCCTGCGGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
EW721100       <-- CCCTGCTGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
FD952820       <-- CCCTGCTGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
EY909286       <-- CCCTGCTGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
FD548003       <-- CCCTGCGGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
FD531781       <-- CCCTGCTGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
EV540820       <-- CCCTGCTGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
EY895098       <-- CCCTGCTGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
FD966905       <-- CCCTGCTGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
FD573075       <-- CCCTGCGGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
EY936000       <-- CCCTGCGGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
FD935897       <-- CCCTGCTGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
EX759805       <-- CCCTGCTGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
EX754843       --> CCCTGCTGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
EY899286       --> CCCTGCTGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
FD536283       --> CCCTGCTGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
FD577427       --> CCCTGCTGAGATTGTTGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
EW717114       --> CCCTGCTGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
FD568771       --> CCCTGCGGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
FD572301       --> CCCTGCGGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
FD947940       --> CCCTGCGGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
FD970579       --> CCCTGCTGAGATTGTCGGAAAGCGTA........................
EV527647       --> CCCTGCGGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
EV536353       --> CCCTGCTGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
EX896808       --> CCCTGCGGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
EY912967       --> CCCTGCTGAGATTGTCGGACAGCGTACCAGATACCGTGTTGATGGCACCA
EY940205       --> CCCTGCGGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
EY940839       --> CCCTGCTGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
FD552178       --> CCCTGCGGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
FD557738       --> CCCTGCTGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
FD939879       --> CCCTGCTGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
FD957058       --> CCCTGCTGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
EW722700       --> CCCTACTGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
EX755824       --> CCCTGCTGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
FD958303       --> CCCTGCTGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA
FY435846       --> ..................................................
EW722699       --> CCCTACTGAGATTGTCGGAAAGCGTACCAGATACCGTGTTGATGGCACCA

               551    -    601
UN23556        --> AGATCATGAAGGTCTATTTGGAGCCTAAGGAGAGGAATAACACTGAGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438216       <-- AGATCATGAAGGTCTATTTGGAGCCTAAGGAGAGGAATAACACTGAGTAC
EV531839       <-- AGATCATGAAGGTCTATTTGGAGCCTAAGGAGAGGAATAACACTGAGTAC
EY936535       <-- AGATCATGAAGGTCTATTTGGAGCCTAAGGAGAGGAATAACACTGAGTAC
EX900681       <-- AGATCATGAAGGTGTATTTGGAGCCTAAGGAGAGGAATAACACGGAGTAC
FD575971       <-- AGATCATGAAGGTGTATTTGGAGCCTAAGGAGAGGAATAACACGGAGTAC
EW721100       <-- AGATCATGAAGGTCTATTTGGAGCCTAAGGAGAGGAATAACACTGAGTAC
FD952820       <-- AGATCATGAAGGTCTATTTGGAGCCTAAGGAGAGGAATAACACTGAGTAC
EY909286       <-- AGATCATGAAGGTCTATTTGGAGCCTAAGGAGAGGAATAACACTGAGTAC
FD548003       <-- AGATCATGAAGGTGTATTTGGAGCCTAAGGAGAGGAATAACACGGAGTAC
FD531781       <-- AGATCATGAAGGTCTATTTGGAGCCTAAGGAGAGGAATAACACTGAGTAC
EV540820       <-- AGATCATGAAGGTCTATTTGGAGCCTAAGGAGAGGAATAACACTGAGTAC
EY895098       <-- AGATCATGAAGGTCTATTTGGAGCCTAAGGAGAGGAATAACACTGAGTAC
FD966905       <-- AGATCATGAAGGTCTATTTGGAGCCTAAGGAGAGGAATAACACTGAGTAC
FD573075       <-- AGATCATGAAGGTGTATTTGGAGCCTAAGGAGAGGAATAACACGGAGTAC
EY936000       <-- AGATCATGAAGGTGTATTTGGAGCCTAAGGAGAGGAATAACACGGAGTAC
FD935897       <-- AGATCATGAAGGTCTATTTGGAGCCTAAGGAGAGGAATAACACTGAGTAC
EX759805       <-- AGATCATGAAGGTCTATTTGGAGCCTAAGGAGAGGAATAACACTGAGTAC
EX754843       --> AGATCATGAAGGTCTATTTGGAGCCTAAGGAGAGGAATGACACTGAGTAC
EY899286       --> AGATCATGAAGGTCTATTTGGAGCCTAAGGAGAGGAATAACACTGAGTAC
FD536283       --> AGATCATGAAAGTCTATTTGGAGCCTAAG-AGAGGAATAACACTGAGTAC
FD577427       --> AGATCATGAAGGTCTATTTGGAGCCTAAGGAGAGGAATAACACTGAGTAC
EW717114       --> AGATCATGAAGGTCTATTTGGAGCCTAAGGAGAGGAATAACACTGAGTAC
FD568771       --> AGATCATGAAAGTGTATTTGGAGC..........................
FD572301       --> -GATCATGAAGtgta...................................
FD947940       --> AGATCATGAAGGTGTATTTGGAGCCTAAAGAGAGGAATAACACGGAGTAC
FD970579       --> ..................................................
EV527647       --> AGATCATGAAGGTCTATTTGGAGCCTAAGGAGAGGAATAACACTGAGTAC
EV536353       --> AGATCATGAAGGTCTATTTGGAGCCTAAGGAGAGGAATAACACTGAGTAC
EX896808       --> AGATCATGAAGGTGTATTTGGAGCCTAAGGAGAGGAATAACACGGAGTAC
EY912967       --> AGATCATGAAGGTCTATTTGGAGCCTAAGGAGAGGAATAACACTGAGTAC
EY940205       --> AGATCATGAAGGTGTATTTGGAGCCTAAGGAGAGGAATAACACGGAGTAC
EY940839       --> AGATCATGAAGGTCTATTTGGAGCCTAAGGAGAGGAATAACACTGAGTAC
FD552178       --> AGATCATGAAGGTGTATTTGGAGCCTAAGGAGAGGAATAACACGGAGTAC
FD557738       --> AGATCATGAAGGTGTATTTGGAGCCTAAGGAGAGGAATAACACAGAGTAC
FD939879       --> AGATCA............................................
FD957058       --> AGATCATGAAGGTCTATTTGGAGCC.........................
EW722700       --> AGATCATGAAGGTCTATTTGGAGCCTAAGGAGAGGAATAACACTGAGTAC
EX755824       --> AGATCATGAAGGTCTATTTGGAGCCTAAGGAGAGGAATAACACTGAGTAC
FD958303       --> AGATCATGAAGGTCTATTTGGAGCCTAAGGAGAGGAATAACACTGAGTAC
FY435846       --> ..................................................
EW722699       --> AGATCATGAAGGTCTATTTGGAGCCTAAGGAGAGGAATAACACTGAGTAC

               601    -    651
UN23556        --> AAGCTTGAGACAATGG-TT-GGTGTGTACAGGAAACTTACAGGGAAAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438216       <-- AAGCTTGAGACAATGG-TT-GGTGTGTACAGGAAACTTACAGGGAAAGAT  Raphanus sativus cv GSK3-1
EV531839       <-- AAGCTTGAGACAATGG-TT-GGTGTGTACAGGAAACTTACAGGGAAAGAT  Raphanus raphanistrum subsp. maritimus
EY936535       <-- AAGCTTGAGACAATGG-TT-GGTGTGTACAGGAAACTTACAGGGAAAGAT  Raphanus sativus cv Early Scarlet Globe
EX900681       <-- AAGCTTGAGACAATGG-TT-GGTGTGTACAGGAAACTCACAGGGAAAGAT  Raphanus sativus cv Early Scarlet Globe
FD575971       <-- AAGCTTGAGACAATGG-TT-GGTGTGTACAGGAAACTCACAGGGAAAGAT  Raphanus sativus cv Early Scarlet Globe
EW721100       <-- AAGCTTGAGACAATGG-TT-GGTGTGTACAGGAAACTTACAGGGAAAGAT  Raphanus sativus var. oleiformis
FD952820       <-- AAGCTTGAGACAATGG-TT-GGTGTGTACAGGAAACTTACAGGGAAAGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY909286       <-- AAGCTTGAGACAATGG-TT-GGTGTGTACAGGAAACTCACAGGGAAAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548003       <-- AAGCTTGAGACAATGG-TT-GGTGTGTACAGGAAACTCACAGGGAAAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD531781       <-- AAGCTTGAGACAATGG-TT-GGTGTGTACAGGAAACTTACAGGGAAAGAT  Raphanus raphanistrum subsp. maritimus
EV540820       <-- AAGCTTGAGACTATGG-TT-GGTGTGTACAGGAAACTCACAGGGAAAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895098       <-- AAGCTTGAGACAATGG-TT-GGTGTGTACAGGAAACTTACAGGGAAAGAT  Raphanus raphanistrum subsp. maritimus
FD966905       <-- AAGCTTGAGACTATGG-TT-GGTGTGTACAGGAAACTCACAGGGAAAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD573075       <-- AAGCTTGAGACAATGG-TT-GGTGTGTACAGGAAACTCACAGGGAAAGAT  Raphanus sativus cv Early Scarlet Globe
EY936000       <-- AAGCTTGAGACAATGG-TT-GGTGTGTACAGGAAACTCACAGGGAAAGAT  Raphanus sativus cv Early Scarlet Globe
FD935897       <-- AAGCTTGAGACAATGG-TT-GGTGCGTACAGGAAACTTACAGGGAAAGAT  Raphanus sativus var. oleiformis
EX759805       <-- AAGCTTGGGACTATGG-TT-GGTGTGTACAGGAAACTCACAGGGAAAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754843       --> AAGCTTGAGACTATGG-TT-GGTGTGTACAGGAAACTCACAGGGAAAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899286       --> AAGCTTGAGACAATGG-TT-GGTGTGTACAGGAAACTTACAGGGAAAGAT  Raphanus raphanistrum subsp. maritimus
FD536283       --> AAGCTTGAGACAATGG-TT-GGTGTGTACAGGAAACTTACAGG-AAAGAT  Raphanus raphanistrum subsp. maritimus
FD577427       --> AAGCTTGAGACAATGG-TT-GGTGTGTACAGGAAACTTACAGGGAAAGAT  Raphanus sativus cv Rat-Tail Radish #3870
EW717114       --> AAGCTTGAGACAATGG-TT-GGTGTGTACAGGAAACTTACAGGGAAAGAT  Raphanus sativus var. oleiformis
FD568771       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD572301       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD947940       --> AAGCTTGAGACAATGG-TT-GGTGT.........................  Raphanus sativus cv Early Scarlet Globe
FD970579       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV527647       --> AAGCTTGAGACAATGG-TT-GGTGTGTACAGGAAACTTACAGGGAAAGAT  Raphanus raphanistrum subsp. maritimus
EV536353       --> AAGCTTGAGACTATGG-TT-GGTGTGTACAGGAAACTCACAGGGAAAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX896808       --> AAGCTTGAGACAATGG-TT-GGTGTGTACAGGAAACTCACAGGGAAAGAT  Raphanus sativus cv Early Scarlet Globe
EY912967       --> AAGCTTGAGACAATGG-TT-GGTGTGTACAGGAAACTCACAGGGAAAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940205       --> AAGCTTGAGACAATGG-TT-GGTGTGTACAGGAAACTCACAGGGAAAGAT  Raphanus sativus cv Early Scarlet Globe
EY940839       --> AAGCTTGAGACAATGG-TT-GGTGTGTACAGGAAACTTACAGGGAAAGAT  Raphanus sativus cv Early Scarlet Globe
FD552178       --> AAGCTTGAGACAATGG-TT-GGTGTGTACAGGAAACTCACAGGGAAAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557738       --> AAGCTTGAGACAATGG-TT---TGTGTACAGGAAACTCACAGGGAAAGAT  Raphanus raphanistrum subsp. landra
FD939879       --> ..................................................  Raphanus sativus var. oleiformis
FD957058       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW722700       --> AAGCTTGAGACAATGGGTT-GGTGTGTACAGGAAACTTACAGGGAAAGAT  Raphanus sativus cv Early Scarlet Globe
EX755824       --> AAGCTTGGGACTATGG-TT-GGTGTGTACAGGAAACTCACAGGGAAAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD958303       --> AAGCTTGAGACAATGG-TT-GGTGTGTACAGGAAACTTACAGGGAAAGAT  Raphanus sativus cv Rat-Tail Radish #3870
FY435846       --> ..................................................  Raphanus sativus cv GSK3-1
EW722699       --> AAGCTTGAGACAATGG-TTTGGTGTGTACAGGAAACTTACAGGGAAAGAT  Raphanus sativus cv Early Scarlet Globe

               651    -    701
UN23556        --> GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAGGAGATACAATGTTG-T
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438216       <-- GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAGGAGATACAATGTTG-T
EV531839       <-- GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAGGAGATACAATGTTG-T
EY936535       <-- GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAGGAGATACAATGTTG-T
EX900681       <-- GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAGGAGATAAAATGTTG-T
FD575971       <-- GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAGGAGATAAAATGTTG-T
EW721100       <-- GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAGGAGATACAATGTTG-T
FD952820       <-- GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAGGAGATACAATGTTG-T
EY909286       <-- GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAGGAGATACAATGTTG-T
FD548003       <-- GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAGGAGATAAAATGTTG-T
FD531781       <-- GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAGGAGATACAATGTTG-T
EV540820       <-- GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAGGAGATACAATGTTG-T
EY895098       <-- GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAGGAGATACAATGTTG-T
FD966905       <-- GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAGGAGATACAATGTTG-T
FD573075       <-- GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAGGAGATAAAATGTTG-T
EY936000       <-- GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAGGAGATAAAATGTTG-T
FD935897       <-- GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAGGAGATACAATGTTG-T
EX759805       <-- GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAGGAGATACAATGTTG-T
EX754843       --> GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAGGAGATACAATGTTG-T
EY899286       --> GTAGTTTTCGAGTACCCAGTCGCTGAAGCT....................
FD536283       --> GTAGTTTTCGAGT.....................................
FD577427       --> GTAGTTTTCGAGTACCCAGTCACTGAAGCTTGAGGAGAT-CAGTGTTGGT
EW717114       --> GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAG-AGATACAATGTTG-T
FD568771       --> ..................................................
FD572301       --> ..................................................
FD947940       --> ..................................................
FD970579       --> ..................................................
EV527647       --> GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAGGAGATACAATGTTG-T
EV536353       --> GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAGGAGATACAATGTTG-T
EX896808       --> GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAG-AGATAAAATGTTG-T
EY912967       --> GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAGGAGATACAATGTTG-T
EY940205       --> GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAGGAGATAAAATGTTG-T
EY940839       --> GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAG-AGATACAATGTTG-T
FD552178       --> GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAG-AGATAAAATGTTG-T
FD557738       --> GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAGGAGAT-CAATGTTG-G
FD939879       --> ..................................................
FD957058       --> ..................................................
EW722700       --> GTAGTTTTCGAGTGCCCAGTCGCTGAAGCTTGAGGAGATACAATGTTG-T
EX755824       --> GTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAG-AGATACAATGTTG-T
FD958303       --> GTAGTTTTCGAGTACCCAGTCACTGAAGCTTGAG-AGAT-CAGTGTTGGT
FY435846       --> ..................................................
EW722699       --> GTAGTTTTCGAGTGCCCAGTCGCTGAAGCTTGAG-AGATACAATGTTG-T

               701    -    751
UN23556        --> TTTAATTCTTCTTTTTTGTCGGATAGTTTTGG-TTCTG-TTTGAGAGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438216       <-- TTTAATTCTTCTTTTTTGTCGGATAGTTTTGG-TTCTG-TTTGAGAGTAA
EV531839       <-- TTTAATTCTTCTTTTTTGTCGGATAGTTTTGG-TTCTG-TTTGAGAGTAA
EY936535       <-- TTTAATTCTTCTTTTTTGTCGGATAGTTTTGG-TTCTG-TTTGAGAGTAA
EX900681       <-- TTTAATTCTTCTTTTTTGTCGGATAGTTTTGG-TTCTG-TTTGAGAGTAA
FD575971       <-- TTTAATTCTTCTTTTTTGTCGGATAGTTTTGG-TTCTG-TTTGAGAGTAA
EW721100       <-- TTTAATTCTTCTTTTTTGTCGGATAGTTTTGG-TTCTG-TTTGAGAGTAA
FD952820       <-- TTTAATTCTTCTTTTTTGTCGGATAGTTTTGG-TTCTG-TTTGAGAGTAA
EY909286       <-- TTTAATTCTTCTTTTTTGTCGGATAGTTTTGG-TTCTG-TTTGAGAGTTG
FD548003       <-- TTTAATTCTTCTTTTTTGTCGGATAGTTTTGG-TTCTG-TTTGAGAGTAA
FD531781       <-- TTTAATTCTTCTTTTTTGTCGGATAGTTTTGG-TTCTG-TTTGAGAGTAA
EV540820       <-- TTTAATTCTTCTTTTTTGTCGGATAGTTTTGG-TTCTG-TTTGAGAGTAA
EY895098       <-- TTTAATTCCTCTTTTTTGTCGGATAGTTTTGG-TTCTG-TTTGAGAGTAA
FD966905       <-- TTTAATTCTTCTTTTTTGTCGGATAGTTTTGG-TTCTG-TTTGAGAGTAA
FD573075       <-- TTTAATTCTTCTTTTTTGTCGGATAGTTTTGG-TTCTG-TTTGAGAGTAA
EY936000       <-- TTTAATTCTTCTTTTTTGTCGGATAGTTTTGG-TTCTG-TTTGAGAGTAA
FD935897       <-- TTTAATTCTTCTTTTTTGTCGGATAGTTTTGG-TTCTG-TTTGAGAGTAA
EX759805       <-- TTTAATTCTTCTTTTTTGTCGGATAGTTTTGG-TTCTG-TTTGAGAGTAA
EX754843       --> TTTAATTCTTCTTTTT-GCCGGATAGTTTTGG-TTCTG-TTTGAGAGTAA
EY899286       --> ..................................................
FD536283       --> ..................................................
FD577427       --> TTTAATTCTTCTT.....................................
EW717114       --> TTTA-TTCTTCTTTTT-GTCGGATAGTTTTGG-T-CTG-TTTGAGAGTA.
FD568771       --> ..................................................
FD572301       --> ..................................................
FD947940       --> ..................................................
FD970579       --> ..................................................
EV527647       --> TTTAATTCTTCTTTTTTGTCGGATAGTTTTGG-TTCTG-TTTGAGAGTAA
EV536353       --> TTTAATTCTTCTTTTTTGTCGGATAGTTTTGG-TTCTG-TTTGAGAGTAA
EX896808       --> TTTAATTCTTCTTTTT-GTCGGATAGTTTTGG-TTCTG-TTTGAGAGTAA
EY912967       --> TTTAATTCTTCTTTTT-GTCGGATAGTTTTGG-TTCTG-TTTGAGAGTtg
EY940205       --> TTTAATTCTTCTTTTTTGTCGGATAGTTTTGG-TTCTG-TTTGAGAGTAA
EY940839       --> TTTAATTCTTCTTTTTg.................................
FD552178       --> TTTAATTCTTCTTTTT-GTCGGATAGTTTTGG-TTCTG-TTTGAGAGTAA
FD557738       --> TTTTATTCTTCTTTTTT.................................
FD939879       --> ..................................................
FD957058       --> ..................................................
EW722700       --> TTTAATTCTTCTTTTTTGTCGGATAGTTTTGGGTTCTGGTTTGAGAGTAA
EX755824       --> TTTAATTCTTCTTTTT..................................
FD958303       --> TTTAATTCTTCTTTTTTttt..............................
FY435846       --> ..................................................
EW722699       --> TTTAATTCTTCTTTTT..................................

               751    -    801
UN23556        --> AAAAA-CTCTTTGGAAAGATTTTCTTGTTAAAGTTGCTTCACACTCTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438216       <-- AAAAA-CTCTT-GGAAAGA...............................  Raphanus sativus cv GSK3-1
EV531839       <-- AAAAA-CTCTTTGGAAAGATTTTCTTGTTCAAGTTGCTT...........  Raphanus raphanistrum subsp. maritimus
EY936535       <-- AAAAA-CTCTTTGGAAAGATTTTCTTGTTAAAGTTGCTTCACACTCTTCC  Raphanus sativus cv Early Scarlet Globe
EX900681       <-- AAAA--CTCTTTGG....................................  Raphanus sativus cv Early Scarlet Globe
FD575971       <-- AAAAA-CTCTTTGGAAAGATTTTCTTGTTTAAGTTGCTTCACACTCTTCC  Raphanus sativus cv Early Scarlet Globe
EW721100       <-- AAAAA-CTCTTTGGAAAGATTTTCTTGTTAAAGTTGCTTCACACTCTTCC  Raphanus sativus var. oleiformis
FD952820       <-- AAAAA-CTCTTTGGAAAGATTTTCTTGTTAAAGTTGCTTCACACTCTTCC  Raphanus sativus cv Rat-Tail Radish #3870
EY909286       <-- AAAAA-CTCTTTGGAAAGATTTTCTTGTTAAAGTTGCTTCACACTCTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548003       <-- AAAAA-CTCTTTGGAAAGATTTTCTTGTTTAAGTTGCTTCACACTCTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD531781       <-- AAAAA-CTCTTTGGAAAGATTTTCTTGTTAAAGTTGCTTCACACTCTTCC  Raphanus raphanistrum subsp. maritimus
EV540820       <-- AAAAAACTCTTTGGAAAGATTTTCTTGTTAAAGTTGCTTCACACTCTTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895098       <-- AAAAA-CTCTTTGGAAAGATTTTCTTGTTAAAGTcg..............  Raphanus raphanistrum subsp. maritimus
FD966905       <-- AAAAAACTCTTTGGAAAGATTTTCTTGTTAAAGTTGCTTCACACTCTTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD573075       <-- AAAAA-CTCTTTGGAAAGATTTTCTTGTTTAAGTTGCTTC..........  Raphanus sativus cv Early Scarlet Globe
EY936000       <-- AAAAA-CTCTTTGGAAAGATTTTCTTGTTTAAGTTGCTTCACACTCTTCC  Raphanus sativus cv Early Scarlet Globe
FD935897       <-- AAAAA-CTCTTTGGAAAGATTTTCTTGTTAAAGTTGCTTCACACTCTTCC  Raphanus sativus var. oleiformis
EX759805       <-- AAAAAACTCTTTGGAAAGATTTTCTTGTTAAAGTTGCTTCCCACTCTTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754843       --> AAAAA.............................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899286       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD536283       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD577427       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW717114       --> ..................................................  Raphanus sativus var. oleiformis
FD568771       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD572301       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD947940       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD970579       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV527647       --> AAAAA-CTCTTTGGAAAGATTTTCTTGTTCAAGTTGCTTCACACTCTTCC  Raphanus raphanistrum subsp. maritimus
EV536353       --> AAAAAACTCTTTGGAAAGATTTTCTTGTTAAAGTTGCTTCACACTCTTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX896808       --> AAA...............................................  Raphanus sativus cv Early Scarlet Globe
EY912967       --> a.................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940205       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY940839       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD552178       --> AAAA--CTCTTTGGAAAGATTTTCTTGTTTAAGTTGCTTCACACTCTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557738       --> ..................................................  Raphanus raphanistrum subsp. landra
FD939879       --> ..................................................  Raphanus sativus var. oleiformis
FD957058       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW722700       --> AAAAA-CTCTTTGGAAAGATTTTCTTGTTAAAGTTGCTTCACACTCT...  Raphanus sativus cv Early Scarlet Globe
EX755824       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD958303       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY435846       --> ..................................................  Raphanus sativus cv GSK3-1
EW722699       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               801    -    851
UN23556        --> TCCTATTTCTGTTTAATAAGACCTTTCTTATGTTGTTCTAGCATTCACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438216       <-- ..................................................
EV531839       <-- ..................................................
EY936535       <-- TCCTATTTCTGTTTAATAAGACCTTTCTTATGTTGTTCc...........
EX900681       <-- ..................................................
FD575971       <-- TCAAATTTCAGTTTAATAAGACCCTTCTTATGT.................
EW721100       <-- TCCTATTTCTGTTTAATAAGACCTTTCTTATGTTGTTCcaat........
FD952820       <-- TCCTATTTCTGTTTAATAAGACCTTTCTTATGTTGTTCCAGC........
EY909286       <-- TCCTATTTCTGTTTAATAAGACC--TCTTATGTTGTTCTg..........
FD548003       <-- TCt...............................................
FD531781       <-- TC................................................
EV540820       <-- TGCTATTCCTGTTTAATAAGACCTTTCTTATGTTG...............
EY895098       <-- ..................................................
FD966905       <-- TGCTATTTCTGTTTAATAAGACCTTTCTTATGTTGTTCc...........
FD573075       <-- ..................................................
EY936000       <-- TCAAATTTCAGTTTAATAAGACCTTTCTTATGTTGTTtggc.........
FD935897       <-- TCCTATTTCTGTTTAATAAGACCTTTCTTATGTTGTTCCAGCATTCACAG
EX759805       <-- TGCTATTTCTGTTTAATAAGCCCTTTCTTATGTTGTTCc...........
EX754843       --> ..................................................
EY899286       --> ..................................................
FD536283       --> ..................................................
FD577427       --> ..................................................
EW717114       --> ..................................................
FD568771       --> ..................................................
FD572301       --> ..................................................
FD947940       --> ..................................................
FD970579       --> ..................................................
EV527647       --> TCCTATTTCTGTTTAt..................................
EV536353       --> Tg................................................
EX896808       --> ..................................................
EY912967       --> ..................................................
EY940205       --> ..................................................
EY940839       --> ..................................................
FD552178       --> TCt...............................................
FD557738       --> ..................................................
FD939879       --> ..................................................
FD957058       --> ..................................................
EW722700       --> ..................................................
EX755824       --> ..................................................
FD958303       --> ..................................................
FY435846       --> ..................................................
EW722699       --> ..................................................

               851    -    901
UN23556        --> TTTCACAAAC-ATCATCTAAAAAAA-TCAAATCGAATTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY438216       <-- .........................................
EV531839       <-- .........................................
EY936535       <-- .........................................
EX900681       <-- .........................................
FD575971       <-- .........................................
EW721100       <-- .........................................
FD952820       <-- .........................................
EY909286       <-- .........................................
FD548003       <-- .........................................
FD531781       <-- .........................................
EV540820       <-- .........................................
EY895098       <-- .........................................
FD966905       <-- .........................................
FD573075       <-- .........................................
EY936000       <-- .........................................
FD935897       <-- TTTCACAAACTATCATCTAAAAAAAATCAAATCGAATTTAT
EX759805       <-- .........................................
EX754843       --> .........................................
EY899286       --> .........................................
FD536283       --> .........................................
FD577427       --> .........................................
EW717114       --> .........................................
FD568771       --> .........................................
FD572301       --> .........................................
FD947940       --> .........................................
FD970579       --> .........................................
EV527647       --> .........................................
EV536353       --> .........................................
EX896808       --> .........................................
EY912967       --> .........................................
EY940205       --> .........................................
EY940839       --> .........................................
FD552178       --> .........................................
FD557738       --> .........................................
FD939879       --> .........................................
FD957058       --> .........................................
EW722700       --> .........................................
EX755824       --> .........................................
FD958303       --> .........................................
FY435846       --> .........................................
EW722699       --> .........................................