Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN23557

               1      -     51
UN23557        --> ACACAACACAAGGATATAGATAAAGATGGACCTGACAAGGGTTTGGGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535184       <-- ACACAACACAAGGATATAGATAAAGATGGACCTGACAAGGGTTTGGGCTT
EV528467       <-- ..................................................
EX896190       <-- ..................................................
EW723085       <-- ..................................................
EY941339       <-- ..................................................
FD529653       --> ............GATATAGATAAAGATGGACCTGACAAGGGTTTGGGCTT
FD566014       --> ............GATATAGATAAAGATGGACCTGACAAGGGTTTGGGCTT
EY935387       --> ............................gaaCTGACAAGGCTTTGGGCTT
FD953037       --> ..................................................
EX901790       --> ..................................................
EV532449       --> ..................................................
EV545432       --> ..................................................
FD566881       --> ..................................................
FD945010       --> ..................................................
FD945504       --> ..................................................
EY912772       --> ..................................................
EY945210       --> ..................................................
EW730718       --> ..................................................

               51     -    101
UN23557        --> TGGCACTGAAACCTACATTGAATACAAGTAAGGCCCAAATAGTTTTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535184       <-- TGGCACTGAAACCTACATTGAATACAAGTAAGGCCCAAATAGTTTTTCTT  Raphanus raphanistrum subsp. maritimus
EV528467       <-- ..............................AGGCCCAAAAAGTTTTCCTT  Raphanus raphanistrum subsp. maritimus
EX896190       <-- ........................gataagagaaCCAAATAGTTTTTCTT  Raphanus sativus cv Early Scarlet Globe
EW723085       <-- ...............................................CTT  Raphanus sativus cv Early Scarlet Globe
EY941339       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD529653       --> TGGCACTGAAACCTACGTTGAATACAAGTAAGGCCCAAATAGTTTTTCTT  Raphanus raphanistrum subsp. maritimus
FD566014       --> TGGCACTGAAACCTACATTGAATACAAGTAAGGCCCAAATAGTTTTTCTT  Raphanus sativus var. oleiformis
EY935387       --> TAGCACTGAAACCTACATTGAATACAAGTAAGGCCCAAATAGTTTTTCTT  Raphanus sativus cv Early Scarlet Globe
FD953037       --> .GGCACTGAAACCTATATTGAATACAAGCAAGGGCCAAATAGTTTTTCTT  Raphanus sativus cv Rat-Tail Radish #3870
EX901790       --> caGCACTGAAACCTACATTGAATACAAGTAAGGCCCAAATAGTTTTTCTT  Raphanus sativus cv Early Scarlet Globe
EV532449       --> ..............................AGGCCCAAAAAGTTTTCCTT  Raphanus raphanistrum subsp. maritimus
EV545432       --> ...............................GGCCCAAAAAGTTTTCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD566881       --> ...............................GGCCCAAATAGTTTTTCTT  Raphanus sativus var. oleiformis
FD945010       --> .............................agGGCCCAAATAGTTTTTCTT  Raphanus sativus cv Early Scarlet Globe
FD945504       --> ...............................GGCCCAAATAGTTTTTCTT  Raphanus sativus cv Early Scarlet Globe
EY912772       --> ................................GCCCAAAAAGTTTTCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY945210       --> ................................ggCCAAATAGTTTTTCTT  Raphanus sativus cv Rat-Tail Radish #3870
EW730718       --> ...............................................CTT  Raphanus sativus cv Early Scarlet Globe

               101    -    151
UN23557        --> ATTCAATTTGACTATTTGAGGCAA-GACGTAGGACGGTAGGAGTGTGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535184       <-- ATTCAATTTGACTATTTGAGGCAA-GACGTAGGACGGTAGGAGTGTGAAA  Raphanus raphanistrum subsp. maritimus
EV528467       <-- ATTCAATTTGACTATCTGAGGCAA-GACGTAGGACGGTAGGAGTGTGAAA  Raphanus raphanistrum subsp. maritimus
EX896190       <-- ATTCAATTTGACTATTTGAGGCAA-GACGTAGGACGGTAGGAGTGTGAAA  Raphanus sativus cv Early Scarlet Globe
EW723085       <-- ATTCAATTTGACTATTTGAGGCAA-GACGTAGGACGGTAGGAGTGTGAAA  Raphanus sativus cv Early Scarlet Globe
EY941339       <-- ...CAATTTGACTATTTGAGGCAA-GACGTAGGACGGTAGGAGTGTGAAA  Raphanus sativus cv Early Scarlet Globe
FD529653       --> ATTCAATTTGACTATTTGAGGCAA-GACGTAGGACGGTAGGAGTGTGAAA  Raphanus raphanistrum subsp. maritimus
FD566014       --> ATTCAATTTGACTATTTGAGGCAA-GACGTAGGACGGTAGGAGTGTGAAA  Raphanus sativus var. oleiformis
EY935387       --> ATTCAATTTGACTATTTGAGGCAA-GACGTAGGACGGTAGGAGTGTGAAA  Raphanus sativus cv Early Scarlet Globe
FD953037       --> ATTCAATTTGGCTATTTGAGGCAAAGACGTAGGACGGTAGGAGTGTGAAA  Raphanus sativus cv Rat-Tail Radish #3870
EX901790       --> ATTCAATTTGACTATTTGAGGCAA-GACGTAGGACGGTAGGAGTGTGAAA  Raphanus sativus cv Early Scarlet Globe
EV532449       --> ATTCAATTTGACTATCTGAGGCAA-GACGTAGGACGGTAGGAGTGTGAAA  Raphanus raphanistrum subsp. maritimus
EV545432       --> ATTCAATTTGACTATCTGAGGCAA-GACGTAGGACGGTAGGAGTGTGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD566881       --> ATTCAATTTGACTATTTGAGGCAA-GACGTAGGACGGTAGGAGTGTGAAA  Raphanus sativus var. oleiformis
FD945010       --> ATTCAATTTGACTATTTGAGGCAA-GACGTAGGACGGTAGGAGTGTGAAA  Raphanus sativus cv Early Scarlet Globe
FD945504       --> ATTCAATTTGACTATTTGAGGCAA-GACGTAGGACGGTAGGAGTGTGAAA  Raphanus sativus cv Early Scarlet Globe
EY912772       --> ATTCAATTTGACTATCTGAGGCAA-GACGTAGGACGGTAGGAGTGTGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY945210       --> ATTCAATTTGGCTATTTGAGGCAAAGACGTAGGACGGGAGGAGTGTGAAA  Raphanus sativus cv Rat-Tail Radish #3870
EW730718       --> ATTCAATTTGACTATTTGAGGCAA-GACGTAGGACGGTAGGAGTGTGAAA  Raphanus sativus cv Early Scarlet Globe

               151    -    201
UN23557        --> GCATAATACATAAGCTGAAACTAATTAAAACCAACATCTCTAATCATCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535184       <-- GCATAATACATAAGCTGAAACTAATTAAAACCAACATCTCTAATCATCGT
EV528467       <-- GCATAATACATAAGCTGAAACTAATTAAAACCAACATCTCTAATCATCGT
EX896190       <-- GCATAATACATAAGCTGAAACTAATTAAAACCAACATCTCTAATCATCGT
EW723085       <-- GCATAATACATAAGCTGAAACTAATTAAAACCAACATCTCTAATCATCGT
EY941339       <-- GCATAATACATAAGCTGAAACTAATTAAAACCAACATCTCTAATCATCGT
FD529653       --> GCATAATACATAAGCTGAAACTAATTAAAACCAACATCTCTAATCATCGT
FD566014       --> GCATAATACATAAGCTGAAACTAATTAAAACCAACATCTCTAATCATCGT
EY935387       --> GCATAATACATAAGCTGAAACTAATTAAAACCAACATCTCTAATCATCGT
FD953037       --> GCATAATACATAAGCTGAAACTAATTAAAACCAACATCTCTAATCATCGT
EX901790       --> GCATAATACATAAGCTGAAACTAATTAAAACCAACATCTCTAATCATCGT
EV532449       --> GCATAATACATAAGCTGAAACTAATTAAAACCAACATCTCTAATCATCGT
EV545432       --> GCATAATACATAAGCTGAAACTAATTAAAACCAACATCTCTAATCATCGT
FD566881       --> GCATAATACATAAGCTGAAACTAATTAAAACCAACATCTCTAATCATCGT
FD945010       --> GCATAATACATAAGCTGAAACTAATTAAAACCAACATCTCTAATCATCGT
FD945504       --> GCATAATACATAAGCTGAAACTAATTAAAACCAACATCTCTAATCATCGT
EY912772       --> GCATAATACATGAGCTGAAACTAATTAAAACCAACATCTCTAATCATCGT
EY945210       --> GCATAATACATAAGCTGAAACTAATTAAAACCAACATCTCTAATCATCGT
EW730718       --> GCATAATACATAAGCTGAAACTAATTAAAACCAACATCTCTAATCATCGT

               201    -    251
UN23557        --> TTTAGTCCTTTATTTCTCAAACTTCTCCAA-GACGAGAGAGAAA-GTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535184       <-- TTTAGTCCTTTATTTCTCAAACTTCTCCAA-GACAAGAGAGAAA-GTTTC  Raphanus raphanistrum subsp. maritimus
EV528467       <-- TTTAGTCCTTTATTTTTCAAACTTCTCCAA-GAC-AAAGAGAGA-GTTTC  Raphanus raphanistrum subsp. maritimus
EX896190       <-- TTTAGTCCTTTATTTCTCAAACTTCTCCAA-GACGAGGGAGAAA-GTTTC  Raphanus sativus cv Early Scarlet Globe
EW723085       <-- TTTAGTCCTTTATTTCTCAAACTTCTCCAAAGACGAGAGAGAAAAGTTTC  Raphanus sativus cv Early Scarlet Globe
EY941339       <-- TTTAGTCCTTTATTTCTCAAACTTCTCCAA-GACGAGAGAGAAA-GTTTC  Raphanus sativus cv Early Scarlet Globe
FD529653       --> TTTAGTCCTTTATTTCTCAAACTTCTCCAA-GACAAGAGAGAAA-GTTTC  Raphanus raphanistrum subsp. maritimus
FD566014       --> TTTAGTCCTTTATTTCTCAAACTTCTCCAA-GACAAGAGAGAAA-GTTTC  Raphanus sativus var. oleiformis
EY935387       --> TTTAGTCCTTTATTTCTCAAACTTCTCCAA-GACGAGAGAGAAA-GTTTC  Raphanus sativus cv Early Scarlet Globe
FD953037       --> TTTAGTCCTTTATTTTTCAAACTTCTCCAA-GACAAGAGAGAAA-GTTTC  Raphanus sativus cv Rat-Tail Radish #3870
EX901790       --> TTTAGTCCTTTATTTCTCAAACTTCTCCAA-GACGAGAGAGAAA-GTTTC  Raphanus sativus cv Early Scarlet Globe
EV532449       --> TTTAGTCCTTTATTTTTCAAACTTCTCCAA-GAC-AAAGAGAGA-GTTTC  Raphanus raphanistrum subsp. maritimus
EV545432       --> TTTAGTCCTTTATTTTTCAAACTTCTCCAA-GAC-AAAGAGAGA-GTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD566881       --> TTTAGTCCTTTATTTCTCAAACTTCTCCAA-GACAAGAGAGAAA-GTTTC  Raphanus sativus var. oleiformis
FD945010       --> TTTAGTCCTTTATTTCTCAAACTTCTCCAA-GACGAGAGAGAAA-GTTTC  Raphanus sativus cv Early Scarlet Globe
FD945504       --> TTTAGTCCTTTATTTCTCAAACTTCTCCAA-GACGAGAGAGAAA-GTTTC  Raphanus sativus cv Early Scarlet Globe
EY912772       --> TTTAGTCCTTTATTTTTCAAACTTCTCCAA-GAC-AAAGAGAGA-GTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY945210       --> TTTAGTCCTTTATTTTTCAAACTTCTCCAA-GACAAGAGAGAAA-GTTTC  Raphanus sativus cv Rat-Tail Radish #3870
EW730718       --> TTTAGTCCTTTATTTCTCAAACTTCTCCAA-GACGAGAGAGAAA-GTTTC  Raphanus sativus cv Early Scarlet Globe

               251    -    301
UN23557        --> TACTTCAA-CCACC-ATTACATCGCCGACTGGAAGATCATCTCAGCGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535184       <-- TACTTCAA-CCACC-ATTACATCGCCGACTGGAAGATCATCTCAGCGAGT  Raphanus raphanistrum subsp. maritimus
EV528467       <-- TACTTCAA-CCACA-ATTACATCGCCGACTGGAAGATCATCTCAGCGAGT  Raphanus raphanistrum subsp. maritimus
EX896190       <-- TACTTCAA-CCACC-ATTACATCGCCGACTGGAGGATCATCTCAGCGAGT  Raphanus sativus cv Early Scarlet Globe
EW723085       <-- TACTTCAAACCACCCATTACATCGCCGACTGGAA................  Raphanus sativus cv Early Scarlet Globe
EY941339       <-- TACTTCAA-CCACC-ATTACATCGCCGACTGGAAGATCATCTCAGCGAGT  Raphanus sativus cv Early Scarlet Globe
FD529653       --> TACTTCAA-CCACC-ATTACATCGCCGACTGGAAGATCATCTCAGCGAGT  Raphanus raphanistrum subsp. maritimus
FD566014       --> TACTTCAA-CCACC-ATTACATCGCCGACCGGAAGATCATCTCAGCGAGT  Raphanus sativus var. oleiformis
EY935387       --> TACTTCAA-CCACC-ATTACATCGCCGACTGGAAGATCATCTCAGCGAGT  Raphanus sativus cv Early Scarlet Globe
FD953037       --> TACTTCAA-CCACA-ATTACATCGCCGACTGGAAGATCATCTCAGCGAGT  Raphanus sativus cv Rat-Tail Radish #3870
EX901790       --> TACTTCAA-CCACC-ATTACATCGCCGACTGGAAGATCATCTCAGCGAGT  Raphanus sativus cv Early Scarlet Globe
EV532449       --> TACTTCAA-CCACA-ATTACATCGCCGACTGGAAGATCATCTCAGCGAGT  Raphanus raphanistrum subsp. maritimus
EV545432       --> TACTTCAA-CCACA-ATTACATCGCCGACTGGAAGATCATCTCAGCGAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD566881       --> TACTTCAA-CCACC-ATTACATCGCCGACTGGAAGATCATCTCAGCGAGT  Raphanus sativus var. oleiformis
FD945010       --> TACTTCAA-CCACC-ATTACATCGCCGAC-GGAAGATCATCTCAGCGAGT  Raphanus sativus cv Early Scarlet Globe
FD945504       --> TACTTCAA-CCACC-ATTACATCGCCGACTGGAAGATCATCTCAGCGAGT  Raphanus sativus cv Early Scarlet Globe
EY912772       --> TACTTCAA-CCACA-ATTACATCGCCGACTGGAAGATCATCTCAGCGAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY945210       --> TACTTCAA-CCACA-ATCACATCGCCGACTGGAAGATCATCTCAGCGAGT  Raphanus sativus cv Rat-Tail Radish #3870
EW730718       --> TACTTCAA-CCACC-ATTACATCGCCGACTGGAAGATCATCTCAGCGAGT  Raphanus sativus cv Early Scarlet Globe

               301    -    351
UN23557        --> TCCTGTTTAGCAGAAGGAACCTTTGGTTCTCCAAACTCTTTAGCCTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535184       <-- TCCTGTTTAGCAGAAGGAACCTTTGGTTCTCCAAACTCTTTAGCCTTCTT
EV528467       <-- TCCTGTTTAGCAGAAGGAACCTTTGGTTCTCCAAACTCTTTAGCCTTCTT
EX896190       <-- TCCTGTTTAGCAGAAGGAACCTTTGGTTCTCCAAACTCTTTAGCCTTCTT
EW723085       <-- ..................................................
EY941339       <-- TCCTGTTTAGCAGAAGGAACCTTTGGTTCTCCAAACTCTTTAGCCTTCTT
FD529653       --> TCCTGTTTAGCAGAAGGAACCTTTGGTTCTCCAAACTCTTTAGCCTTCTT
FD566014       --> TCCTGTTTAGCAAAAGGAACCTTTGGTTCTCCAAACTCTTTAGCCTTCTT
EY935387       --> TCCTGTTTAGCAGAAGGAACCTTTGGTTCTCCAAACTCTTTAGCCTTCTT
FD953037       --> TCCTGTTTAGCAGAAGGAACCTTTGGTTCTCCAAACTCTTTAGCCTTCTT
EX901790       --> TCCTGTTTAGCAGAAGGAACCTTTGGTTCTCCAAACTCTTTAGCCTTCTT
EV532449       --> TCCTGTTTAGCAGAAGGAACCTTTGGTTCTCCAAACTCTTTAGCCTTCTT
EV545432       --> TCCTGTTTAGCAGAAGGAACCTTTGGTTCTCCAAACTCTTTAGCCTTCTT
FD566881       --> TCCTGTTTAGCAGAAGGAACCTTTGGTTCTCCAAACTCTTTAGCCTTCTT
FD945010       --> TCCTGTTTAGCAGAAGGAACCTTTGGTTCTCCAAACTCTTTAGCCTTCTT
FD945504       --> TCCTGTTTAGCAGAAGGAACCTTTGGTTCTCCAAACTCTTTAGCCTTCTT
EY912772       --> TCCTGTTTAGCAGAAGGAACCTTTGGTTCTCCAAACTCTTTAGCCTTCTT
EY945210       --> TCCTGTTTAGCAGAAGGAACCTTTGGTTCTCCAAACTCTTTAGCCTTCTT
EW730718       --> TCCTGTTTAGCAGAAGGAACCTTTGGTTCTCCAAACTCTTTAGCCTTCTT

               351    -    401
UN23557        --> CTCAAGATACTCAAAATCAGCTTTGCCTTCTTCTATTTGCCTCCCAAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535184       <-- CTCAAGATACTCAAAATCAGCTTTGCCTTCTTCTATTTGCCTCCCAAGTT  Raphanus raphanistrum subsp. maritimus
EV528467       <-- CTCAAGATACTCAAAATCAGCTTTGCCTTCTTCTATTTGCTTCCCAAGTT  Raphanus raphanistrum subsp. maritimus
EX896190       <-- CTCAAGATACTCAAAATCAGCTTTGCCTTCTTCTATTTGCCTCCCAAGTT  Raphanus sativus cv Early Scarlet Globe
EW723085       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941339       <-- CTCAAGATACTCAAAATCAGCTTTGCCTTCTTCTATTTGCCTCCCAAGTT  Raphanus sativus cv Early Scarlet Globe
FD529653       --> CTCAAGATACTCAAAATCAGCTTTGCCTTCTTCTATTTGCCCCCCAAGTT  Raphanus raphanistrum subsp. maritimus
FD566014       --> CTCAAGATACTCAAAATCAGCTTTGCCTTCTTCTATTTGCCTCCCAAGTT  Raphanus sativus var. oleiformis
EY935387       --> CTCAAGATACTCAAAATCAGCTTTGCCTTCTTCTATTTGCCTCCCAAGTT  Raphanus sativus cv Early Scarlet Globe
FD953037       --> CTCAAGATACTCAAAATCAGCTTTGCCTTCTTCTATTTGCTTCCCAAGTT  Raphanus sativus cv Rat-Tail Radish #3870
EX901790       --> CTCAAGATACTCAAAATCAGCTTTGCCTTCTTCTATTTGCCTCCCAAGTT  Raphanus sativus cv Early Scarlet Globe
EV532449       --> CTCAAGATACTCAAAATCAGCTTTGCCTTCTTCTATTTGCTTCCCAAGTT  Raphanus raphanistrum subsp. maritimus
EV545432       --> CTCAAGATACTCAAAATCAGCTTTGCCTTCTTCTATTTGCTTCCCAAGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD566881       --> CTCAAGATACTCAAAATCAGCTTTGCCTTCTTCTATTTGCCTCCCAAGTT  Raphanus sativus var. oleiformis
FD945010       --> CTCAAGATACTCAAAATCAGCTTTGCCTTCTTCTATTTGCCTCCCAAGTT  Raphanus sativus cv Early Scarlet Globe
FD945504       --> CTCAAGATACTCAAAATCAGCTTTGCCTTCTTCTATTTGCCTCCCAAGTT  Raphanus sativus cv Early Scarlet Globe
EY912772       --> CTCAAGATACTCAAAATCAGCTTTGCCTTCTTCTATTTGCTTCCCAAGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY945210       --> CTCAAGATACTCAAA...................................  Raphanus sativus cv Rat-Tail Radish #3870
EW730718       --> CTCAAGATACTCAAAATCAGCTTTGCCTTCTTCTATTTGCCTCCCAAGTT  Raphanus sativus cv Early Scarlet Globe

               401    -    451
UN23557        --> CAGAGTTCCAGCTTGAGTATCTCTTTCCTACCAATTCACTTAGACGTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535184       <-- CAGAGTTCCAGCTTGAGTATCTCTTTCCTACCAATTCACTTAGACGTCCA
EV528467       <-- CAGAGTTCCAGCTTGAGTATCTCTTTCCTACCAATTCACTTAGACGTCCA
EX896190       <-- CAGAGTTCCAGCTTGAGTATCTCTTTCCTACCAATTCACTTAGACGTCCA
EW723085       <-- ..................................................
EY941339       <-- CAGAGTTCCAGCTTGAGTATCTCTTTCCTACCAATTCACTTAGACGTCCA
FD529653       --> CAGAGTTCCAGCTTGAGTATCTCTTTCCTACCAATTCACTTAGACGTCCA
FD566014       --> CAGAGTTCCAGCTTGAGTATCTCTTTCCTACCAATTCACTTAAACGTCCA
EY935387       --> CAGAGTTCCAGCTTGAGTATCTCTTTCCTACCAATTCACTTAGACGTCCA
FD953037       --> CAGAGTTCCAGCTTGAGTATCTCTTTCCTACCAATTCACTTAGACGTCCA
EX901790       --> CAGAGTTCCAGCTTGAGTATCTCTTTCCCACCAATTCACTTAGACGTCCA
EV532449       --> CAGAGTTCCAGCTTGAGTATCTCTTTCCTACCAATTCACTTAGACGTCCA
EV545432       --> CAGAGTTCCAGCTTGAGTATCTCTTTCCTACCAATTCACTTAGACGTCCA
FD566881       --> CAGAGTTCCAGCTTGAGTATCTCTTTCCTACCAATTCACTTAGACGTCCA
FD945010       --> CAGAGTTCCAGCTTGAGTATCTCTTTCCTACCAATTCACTTAGACGTCCA
FD945504       --> CAGAGTTCCAGCTTGAGTATCTCTTTCCTACCAATTCACTTAGACGTCCA
EY912772       --> CAGAGTTCCAGCTTGAGTATCTCTTTCCTACCAATTCACTTAGACGTCCA
EY945210       --> ..................................................
EW730718       --> CAGAGTTCCAGCTTGAGTATCTCTTTCCTACCAATTCACTTAGACGTCCA

               451    -    501
UN23557        --> TCCTCCAAGATCTTGGCTGCATTTCTCAGTCCACGAGCGACTGTGTCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535184       <-- TCCTCCAAGATCTTGGCTGCATTTCTCAGTCCACGAGCGACTGTGTCCAT
EV528467       <-- TCCTCCAAGATCTTGGCTGCATTTCTCAGTCCACGAGCGACTGTGTCCAT
EX896190       <-- TCCTCCAAGATCTTGGCTGCATTTCTCAGTCCACGAGCGACTGTGTCCAT
EW723085       <-- ..................................................
EY941339       <-- TCCTCCAAGATCTTGGCTGCATTTCTCAGTCCACGAGCGACTGTGTCCAT
FD529653       --> TCCTCCAAGATCTTGGCTGCATTTCTCAGTCCACGAGCGACTGTGTCCAT
FD566014       --> TCCTCCAAGATCTTGGCTGCATTTCTCAGTCCACGAGCGACTGTGTCCAT
EY935387       --> TCCTCCAAGATCTTGGCTGCATTTCTCAGTCCACGAGCGACTGTGTCCAT
FD953037       --> TCCTCCAAGATCTTGGCTGCATTTCTCAGTCCACGAGCGACTGTGTCCAT
EX901790       --> TCCTCCAAGATCTTGGCTGCATTTCTCAGTCCACGAGCGACTGTGTCCAT
EV532449       --> TCCTCCAAGATCTTGGCTGCATTTCTCAGTCCACGAGCGACTGTGTCCAT
EV545432       --> TCCTCCAAGATCTTGGCTGCATTTCTCAGTCCACGAGCGACTGTGTCCAT
FD566881       --> TCCTCCAAGATCTTGGCTGCATTTCTCAGTCCACGAGCGACTGTGTCCAT
FD945010       --> TCCTCCAAGATCTTGGCTGCATTTCTCAGTCCACGAGCGACTGTGTCCAT
FD945504       --> TCCTCCAAGATCTTGGCTGCATTTCTCAGTCCACGAGCGACTGTGTCCAT
EY912772       --> TCCTCCAAGATCTTGGCTGCATTTCTCAGTCCACGAGCGACTGTGTCCAT
EY945210       --> ..................................................
EW730718       --> TCCTCCAAGATCTTGGCTGCATTTCTCAGTCCACGAGCGACTGTGTCCAT

               501    -    551
UN23557        --> TCCACTAATATGAGCAATGAACAAGTCTTCAACATCTGTACTCTCTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535184       <-- TCCACTAATATGAGCAATGAACAAGTCTTCAACATCTGTACTCTCTCTTC
EV528467       <-- TCCACTAATATGAGCAATGAACAAGTCTTCAACATCTGTACTCTCTCTTC
EX896190       <-- TCCACTAATATGAGCAATGAACAAGTCTTCAACATCTGTACTCTCTCTTC
EW723085       <-- ..................................................
EY941339       <-- TCCACTAATATGAGCAATGAACAAGTCTTCAACATCTGTACTCTCTCTTC
FD529653       --> TCCACTAATATGAGCAATGAACAAGTCTTCAACATCTGTACTCTCTCTTC
FD566014       --> TCCACTAATATGAGCAATGAACAAGTCTTCAACATCTGTACTCTCTCTTC
EY935387       --> TCCACTAATATGAGCAATGAACAAGTCTTCAACATCTGTACTCTCTCTTC
FD953037       --> TCCACTAATATGAGCAATGAACAAGTCTTCAACATCTGTACTCTCTCTTC
EX901790       --> TCCACTAATATGAGCAATGAACAAGTCTTCAACATCTGTACTCTCTCTTC
EV532449       --> TCCACTAATATGAGCAATGAACAAGTCTTCAACATCTGTACTCTCTCTTC
EV545432       --> TCCACTAATATGAGCAATGAACAAGTCTTCAACATCTGTACTCTCTCTTC
FD566881       --> TCCACTAATATGAGCAATGAACAAGTCTTCAACATCTGTACTCTCTCTTC
FD945010       --> TCCACTAATATGAGCAATGAACAAGTCTTCAACATCTGTACTCTCTCTTC
FD945504       --> TCCACTAATATGAGCAATGAACAAGTCTTCAACATCTGTACTCTCTCTTC
EY912772       --> TCCACTAATATGAGCAATGAACAAGTCTTCAACATCTGTACTCTCTCTTC
EY945210       --> ..................................................
EW730718       --> TCCACTAATATGAGCAATGAACAAGTCTTCAACATCTGTACTCTCTCTTC

               551    -    601
UN23557        --> GCAGTTTGGCGTCGAAGTTGAAGCCTCCTGGAGCAATCCCACCGTTTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535184       <-- GCAGTTTGGCGTCGAAGTTGAAGCCTCCTGGAGCAATCCCACCGTTTTTG  Raphanus raphanistrum subsp. maritimus
EV528467       <-- GCAGTTTAGCGTCGAAGTTGAAGCCTCCTGGAGCAATCCCACCGTTTTTG  Raphanus raphanistrum subsp. maritimus
EX896190       <-- GCAGTTTGGCGTCGAAGTTGAAGCCTCC......................  Raphanus sativus cv Early Scarlet Globe
EW723085       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941339       <-- GCAGTTTGGCGTCGAAGTTGAAGCCTCCTGGAGCAATCCCACCGTTTTTG  Raphanus sativus cv Early Scarlet Globe
FD529653       --> GCAGTTTGGCGTCGAAGTTGAAGCCTCTTGGAGCAATCCCACCGTTTTTG  Raphanus raphanistrum subsp. maritimus
FD566014       --> GCAGTTTGGCGTCGAAGTTGAAGCCTCCTGGAGCAATCCCACCGTTTTTG  Raphanus sativus var. oleiformis
EY935387       --> GCAGTTTGGCGTCGAAGTTGAAGCCTCCTGGAGCAATCCCACCGTTTTTG  Raphanus sativus cv Early Scarlet Globe
FD953037       --> GCAGTTTGGCGTCGAAGTTGAAGCCTCCTGGAGCAATCCCACCGTTTTTG  Raphanus sativus cv Rat-Tail Radish #3870
EX901790       --> GCAGTTTGGCGTCGAAGTTGAAGCCTCCTGGAGCAATCCCACCGTTTTTG  Raphanus sativus cv Early Scarlet Globe
EV532449       --> GCAGTTTAGCGTCGAAGTTGAAGCCTCCTGGAGCAATCCCACCGTTTTTG  Raphanus raphanistrum subsp. maritimus
EV545432       --> GCAGTTTAGCGTCGAAGTTGAAGCCTCCTGGAGCAATCCCACCGTTTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD566881       --> GCAGTTTGGCGTCGAAGTTGAAGCCTCCTGGAGCAATCCCACCGTTTTTG  Raphanus sativus var. oleiformis
FD945010       --> GCAGTTTGGCGTCGAAGTTGAAGCCTCCTGGAGCAATCCCACCGTTTTTG  Raphanus sativus cv Early Scarlet Globe
FD945504       --> GCAGTTTGGCGTCGAAGTTGAAGCCTCCTGGAGCAATCCCACCGTTTTTG  Raphanus sativus cv Early Scarlet Globe
EY912772       --> GCAGTTTAGCGTCGAAGTTGAAGCCTCCTGGAGCAATCCCACCGTTTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY945210       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW730718       --> GCAGTTTGGCGTCGAAGTTGAAGCCTCCTGGAGCAATCCCACCGTTTTTG  Raphanus sativus cv Early Scarlet Globe

               601    -    651
UN23557        --> ATGACACTCATCATAACCATGGTTGCTTCTCCAACATCTGTAAGAAACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535184       <-- ATGACACTCATCATAACCATGGTTGCTTCTCCAACATCTGTAAGAAACTG  Raphanus raphanistrum subsp. maritimus
EV528467       <-- ATGACACTCATCATAACCATTGTTGCTTCTCCAACATCTGTAAGAAACTG  Raphanus raphanistrum subsp. maritimus
EX896190       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW723085       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941339       <-- ATGACACTCATCATAACCATGGTTGCTTCTCCAACATCTGTAAGAAACTG  Raphanus sativus cv Early Scarlet Globe
FD529653       --> ATGACACTCATCATAACCATGGTTGCTTCTCCAACATCTGTAAGAAACTG  Raphanus raphanistrum subsp. maritimus
FD566014       --> ATGACACTCATCATAACCATGGTTGCTTCTCCAACATCTGTAAGAAACTG  Raphanus sativus var. oleiformis
EY935387       --> ATGACACTCATCATAACCATGGTTGCTTCTCCAACATCTGTAAGAAACTG  Raphanus sativus cv Early Scarlet Globe
FD953037       --> ATGACACTCATCATAACCATGGTTGCTTCTCCAACATCTGTAAGAAACTG  Raphanus sativus cv Rat-Tail Radish #3870
EX901790       --> ATGACACTCATCATAACCATGGTTGCTTCTCCAACATCTGTAAGAAACTG  Raphanus sativus cv Early Scarlet Globe
EV532449       --> ATGACACTCATCATAACCATTGTTGCTTCTCCAACATCTGTAAGAAACTG  Raphanus raphanistrum subsp. maritimus
EV545432       --> ATGACACTCATCATAAC-ATTGTTGCTTCTCCAACATCTGTAAGAAACTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD566881       --> ATGACACTCATCATAACCATGGTTGCTTCTCCAACATCTGTAAGAAACTG  Raphanus sativus var. oleiformis
FD945010       --> ATGACACTCATCATAACCATGGTTGCTTCTCCAACATCTGTAAGAAACTG  Raphanus sativus cv Early Scarlet Globe
FD945504       --> ATGACACTCATCATAGCCATGGTTGCTTCTCCAACATCTGTAAGAAACTG  Raphanus sativus cv Early Scarlet Globe
EY912772       --> ATGACACTCATCATAACCATTGTTGCTTCTCCAACATCTGTAAGAAACTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY945210       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW730718       --> ATGACACTCATCATAACCATGGTTGCTTCTCCGACATCTGTAAGAAACTG  Raphanus sativus cv Early Scarlet Globe

               651    -    701
UN23557        --> ATCTGTATCCCATCCAGTTTGAGCATCGCCAGTGTTTGCATCAATGTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535184       <-- ATCTGTATCCCATCCAGTTTGAGCATCGCCAGTGTTTGCATCAATGTTAC
EV528467       <-- ATCCGTATCCCATCCAGTTTGAGCATCGCCAc..................
EX896190       <-- ..................................................
EW723085       <-- ..................................................
EY941339       <-- ATCTGTATCCCATCCAGTTTGAGCATCGCCAGTGTTTGCATCAATGTTAC
FD529653       --> ATCTGTATCCCATCCAGTTTGAGCATCGCCAGTGTTTGCATCAATGTTAC
FD566014       --> ATCTGTATCCCATCCAGTTTGAGCATCGCCAGTGTTTGCATCAATGTTAC
EY935387       --> ATCTGTATCCCATCCAGTTTGAGCATCGCCAGTGTTTGCATCAATGTTAC
FD953037       --> ATCTGTACCCCATCCAGTTTGAGCATCGCCAGTGTTTGCATCAATGTTAC
EX901790       --> ATCTGTATCCCATCCAGTTTGAGCATCGCCAGTGTTTGCATCAATGTTAC
EV532449       --> ATCCGTATCCCATCCAGTTTGAGCATCGCCAc..................
EV545432       --> ATCTGTATCCCATCCAGTTTGAGCATCGCCAGTGTTTGCATCAATGTTAC
FD566881       --> ATCTGTATCCCATCCAGTTTGAGCATCGCCAGTGTTTGCATCAATGTTAC
FD945010       --> ATCTGTATCCCATCCAGTTTGAGCATCGCCAGTGTTTGCATCAATGTTAC
FD945504       --> ATTTGTATCCCATCCAGTTTGAGCATCGCCAGTGTTTGCATCAATGTTAC
EY912772       --> ATCTGTATCCCATCCAGTTTGAGCATCGCCAGTGTTTGCATCAATGTTAC
EY945210       --> ..................................................
EW730718       --> ATCTGTATCCCATCCAGTTTGAGCATCGCCAGTGTTTGCATCAATGTTAC

               701    -    751
UN23557        --> CAAGTAAACCGTTAATTCTTGCAGTTTCAAGCTCGTGATGGCAGGTGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535184       <-- CAAGTAAACCGTTAATTCTTGCAGTTc.......................
EV528467       <-- ..................................................
EX896190       <-- ..................................................
EW723085       <-- ..................................................
EY941339       <-- CAAGTAAACCGTTAATTCTTGCAGTTTCAAGCTCGTGc............
FD529653       --> CAAGTAAACCGTTAATTCTTACAGTTTCAAGCTCGTGATGGCAGGTGTGA
FD566014       --> CAAGTAAACCGTTAATTCTTGCAGTTTCAAGCTCGTGA............
EY935387       --> CAAGTAAACCGTTAATTCT...............................
FD953037       --> CAAGCAAACCGTTAATTCTTGCAGTTTCAAGCTCGTGATGGCAGGTGTGA
EX901790       --> CAAGTAAACCGTTAATTCTTGCAGTTTCAAGCTCGTGATGGCAGGTGTGA
EV532449       --> ..................................................
EV545432       --> CAAGCAAACCGTTAATTCTTGCGGTTTCAAGCTCGTGATGGCAGGTGTGA
FD566881       --> CAAGTAAACCGTTAATTCTTGCAGTTTCAAGCTCGTGATGGCAGGTGTGA
FD945010       --> CA................................................
FD945504       --> CAAGTAAACCGTTAATTCTTGCAGTTTCAAGCTCGTGATGGCAGGTGTGA
EY912772       --> CAAGCAAACCGTTAATTCTTGCAGTTTCAAGCTCGTGATGGCAGGTGTGA
EY945210       --> ..................................................
EW730718       --> CAAGTAAACCGTTAATTCTTGCAGTTTCAAGCTCGTGATGGCAGGTGTGA

               751    -    801
UN23557        --> CCAGAAAGCGTTGCGTGGTTACACTCAATGTTGAGTTTAAACTCGTTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535184       <-- ..................................................
EV528467       <-- ..................................................
EX896190       <-- ..................................................
EW723085       <-- ..................................................
EY941339       <-- ..................................................
FD529653       --> CCAGAAAGCGTTGCGTGGTTACACTCAATGTT..................
FD566014       --> ..................................................
EY935387       --> ..................................................
FD953037       --> CCAGAAAGCGTTGCGTGGTTACACTCAATGTTGAGTTTAAACTCGTTGAT
EX901790       --> CCAGAAAGCGTCGCGTGGTTACACTCAATGTTCAGCTTAAACTCATTGAT
EV532449       --> ..................................................
EV545432       --> CCAGAAAGCGTTGCGTGGTTACACTCAATGTTGAGTTTAAACTCGTTGAT
FD566881       --> CCAGAAAGCGTTGCGTGGTTACACTCAATGTTGAGTTTAAACTCGTTGAT
FD945010       --> ..................................................
FD945504       --> CCAGAAAGCGTCGCGTGGTTACACTCAATGTTCAGCTTAAACTCATTGAT
EY912772       --> CCAGAAAGCGTTGCGTGGTTACACTCAATGTTGAGTTTAAACTCGTTGAT
EY945210       --> ..................................................
EW730718       --> CCAGAAAGC.........................................

               801    -    851
UN23557        --> AAGTCCGTATTTCCTCAGGAAGTTGGCAGCTGTTGCAGCATCCCAGTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535184       <-- ..................................................
EV528467       <-- ..................................................
EX896190       <-- ..................................................
EW723085       <-- ..................................................
EY941339       <-- ..................................................
FD529653       --> ..................................................
FD566014       --> ..................................................
EY935387       --> ..................................................
FD953037       --> AAGTCCGTATTTCC....................................
EX901790       --> AAGTCCGTATTTCC....................................
EV532449       --> ..................................................
EV545432       --> AAGTCCGTATTTCCTCAGGAAGTTGGCAGCTGTTGCAGCATCCCAGTCAT
FD566881       --> AAGTCCGTATTTCCTCAGGAAGTTGGAGGCTGTTGCAGCATCCCAGTCAT
FD945010       --> ..................................................
FD945504       --> AAGTCCGTATTTCCTCAGGAAGTTGGCAGCTGTTGCAGCATCCCAGTCAT
EY912772       --> AAGTCCGTATTTCC....................................
EY945210       --> ..................................................
EW730718       --> ..................................................

               851    -    901
UN23557        --> ACTGGTGCTTGGTTGGTTCTTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~
FD535184       <-- ........................
EV528467       <-- ........................
EX896190       <-- ........................
EW723085       <-- ........................
EY941339       <-- ........................
FD529653       --> ........................
FD566014       --> ........................
EY935387       --> ........................
FD953037       --> ........................
EX901790       --> ........................
EV532449       --> ........................
EV545432       --> ACTGGTGC................
FD566881       --> ACTGGTGCTTGGTTGGTTCTTGAG
FD945010       --> ........................
FD945504       --> ACTGGTG.................
EY912772       --> ........................
EY945210       --> ........................
EW730718       --> ........................