1      -     51
UN23692        --> AAAGGTAAAATATACTTGTTTTGCTTTCATTGACATTTCGAAAAACAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW717343       <-- ..................................................
EX747286       <-- ..................................................
EY921389       <-- ..................................................
EY917543       --> AAAGGTAAAATATACTTGTTTTGCTTTCATTGACATTTCGAAAAACAGAC
FD548023       --> .AAGGTAAAATATACTTGTTTTGATTTCATTGACATTTCGAAAAACAGAC
EW721012       --> ...GGTAAAATATACTTGTTTTGCTTTCATTGACATTTCGAAAAACAGAC
EX751513       --> ...GGTAAAATATACTTGTTTTGCTTTCATTGACATTTCGAAAAACAGAC

               51     -    101
UN23692        --> CCCGGTAACTTCTTACTATTGCACACGTGACAATTTAGATACACACGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW717343       <-- ..................................................
EX747286       <-- ..................................................
EY921389       <-- ..................................................
EY917543       --> CCCGGTAACTTCTTA--ATTGCACACGTGACAATTTAGATACACACGAGG
FD548023       --> CCCGGTAACTTCTTACTATTGCACACGTGACAATTTAGATACACACGAGG
EW721012       --> CCCGGTAACTTCTTACTATTGCACACGTGACAATTTAGATACACACGAGG
EX751513       --> CCCGGTAACTTCTTACTATTGCACACGTGACAATTTAGATACACACGAGG

               101    -    151
UN23692        --> ATTTGATCAAAACCCAAACATTGCAAATATAAAAGAAAAACACAGACCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW717343       <-- ..................................................
EX747286       <-- ..................................................
EY921389       <-- ..................................................
EY917543       --> ATTTGATCAAAACCCAAACATTGCAAATATAAAAGAAAAACACAGACCTA
FD548023       --> ATTTGATCAAAACCCAAACATTGCAAATATAAAA-AAAAACACAGACCTA
EW721012       --> ATTTGATCAAAACCCAAACATTGCAAATATAAAAAAAAAACACAGACCTA
EX751513       --> ATTTGATCAAAACCCAAACATTGCAAATATAAAAGAAAAACACAGACCTA

               151    -    201
UN23692        --> ATAGTTATTGATAACCCGACAGTTTTTCCTAACCTCGCCATTAGATCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW717343       <-- ..................................................
EX747286       <-- ..................................................
EY921389       <-- ..................................................
EY917543       --> ATAGTTATTGATAACCCGACAGTTTTTCCTAACCTCGCCATTAGATCCAT
FD548023       --> ATAGTTATTGATAACCCGACAGTTTTTCCTAACCTCGCCATTAGATCCAT
EW721012       --> ATAGTTATTGATAACCCGACAGTTTTTCCTAACCTCGCCATTAGATCCAT
EX751513       --> ATAGTTATTGATAACCCGACAGTTTTTCCTAACCTCGCCATTAGATCCAT

               201    -    251
UN23692        --> TAACAAGATTCGCAATACCACCCATTTTGATCATCGAACAAGTGAAGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW717343       <-- ..................................................
EX747286       <-- ..................................................
EY921389       <-- ..................................................
EY917543       --> TAACAAGATTCGCAATACCACCCATTTTGATCATCGAACAAGTGAAGTCC
FD548023       --> TAACAAGATTCGCAATACCACCCATTTTGATCATCGAACAAGTGAAGTCC
EW721012       --> TAACAAGATTCGCAATACCACCCATTTTGATCATCGAACAAGTGAAGTCC
EX751513       --> TAACAAGATTCGCAATACCACCCATTTTGATCATCGAACAAGTGAAGTCC

               251    -    301
UN23692        --> TTGAAAAACAAGTACTGGCTCCGACTATAAGCCTCCACAAGTCTCTTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW717343       <-- ..................................................
EX747286       <-- ..................................................
EY921389       <-- ..................................................
EY917543       --> TTGAAAAACAAGTACTGGCTCCGACTATAAGCCTCCACAAGTCTCTTTGT
FD548023       --> TTGAAAAACAAGTACTGGCTCCGACTATAAGCCTCCACAAGTCTCTTTGT
EW721012       --> TTGAAAAACAAGTACTGGCTCCGACTATAAGCCTCCACAAGTCTCTTTGT
EX751513       --> TTGAAAAACAAGTACTGGCTCCGACTATAAGCCTCCACAAGTCTCTTTGT

               301    -    351
UN23692        --> TGTGTTCACGGCCAAATCACTCGAGAAAAGAATCTGATCCGAACTCAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW717343       <-- ..................................................
EX747286       <-- ..................................................
EY921389       <-- ..................................................
EY917543       --> TGTGTTCACGGCCAAATCACTCGAGAAAAGAATCTGATCCGAACTCAAAA
FD548023       --> TGTGTTCACGGCCAAATCACTCGAGAAAAGAATCTGATCCGAACTCAAAA
EW721012       --> TGTGTTCACGGCCAAATCACTCGAGAAAAGAATCTGATCCGAACTCAAAA
EX751513       --> TGTGTTCACGGCCAAATCACTCGAGAAAAGAATCTGATCCGAACTCAAAA

               351    -    401
UN23692        --> GACCTTTTCCTTCGAGGAGGTTCTTGAAATAATTGTTGTCGAAGGCGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW717343       <-- ..................................................
EX747286       <-- ..................................................
EY921389       <-- ..................................................
EY917543       --> GACCTTTTCCTTCGAGGAGGTTCTTGAAATAATTGTTGTCGAAGGCGTTG
FD548023       --> GACCTTTTCCTTCGAGGAGGTTCTTGAAATAATTGTTGTCGAAGGCGTTG
EW721012       --> GACCTTTTCCTTCGAGGAGGTTCTTGAAATAATTGTTGTCGAAGGCGTTG
EX751513       --> GACCTTTTCCTTCGAGGAGGTTCTTGAAATAATTGTTGTCGAAGGCGTTG

               401    -    451
UN23692        --> GTAGAGTTACTGTCTAGGGGAGCTGTTTGGTTTCCACTTCCTCCGGCGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW717343       <-- ...........................................CGGCGGG
EX747286       <-- ..................................................
EY921389       <-- ..................................................
EY917543       --> GTAGAGTTACTGTCTAGGGGAGCTGTTTGGTTTCCGCTTCCTCCGGCGGG
FD548023       --> GTAGAGTTACTGTCTAGGGGAGCTGTTTGGTTTCCACTTCCTCCGGCGGG
EW721012       --> GTAGAGTTACTGTCTAGGGGAGCTGTTTGGTTTCCACTTCCTCCGGCGGG
EX751513       --> GTAGAGTTACTGTCTAGGGGAGCTGTTTGGTTTCCACTTCCTCCGGCGGG

               451    -    501
UN23692        --> ACAAACCGTTCGCAGATCAGACAAGAGTGTTGTCTCAAGTGTTGTGTCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW717343       <-- ACAAACCGTTCGCAGATCAGACAAGAGTGTTGTCTCAAGTGTTGTGTCCG
EX747286       <-- ...............................GTCTCAAGTGTTGTGTCCG
EY921389       <-- ..................................................
EY917543       --> ACAAACCGTTCGCAGATCGGACAAGAGTGTTGTCTCAAGTGTTGTGTCCG
FD548023       --> ACAAACCGTTCGCAGATCAGACAAGAGTGTTGTCTCAAGTGTTGTGTCCG
EW721012       --> ACAAACCGTTCGCAGATCAGACAAGAGTGTTGTCTCAAGTGTTGTGTCCG
EX751513       --> ACAAACCGTTCGCAGATCGGACAAGAGTGTTGTCTCAAGTGTTGTGTCCG

               501    -    551
UN23692        --> GAGATCCTGCGCCTTTAAAGTTGAACAGCCGGTTGCTGAATACATCACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW717343       <-- GAGATCCTGCGCCTTTAAAGTTGAACAGCCGGTTGCTGAATACATCACAC  Raphanus sativus var. oleiformis
EX747286       <-- GAGATC-TGCGCCTTTAAAGTTGAAAAGCCGGTTGCTGAATACATCACAC  Raphanus raphanistrum subsp. maritimus
EY921389       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY917543       --> GAGATCCTGCGCCTTTAAAGTTGAAAAGCCGGTTGC-GAATACATCACAC  Raphanus raphanistrum subsp. landra
FD548023       --> GAGATCCTGCGCCTTTAAAGTTGAACAGCCGGTTGCTGAATACATCACAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW721012       --> GAGATCCTGCGCCTTTAAAGTTGAACAGCCGGTTGCTGAATACATCACAC  Raphanus sativus var. oleiformis
EX751513       --> GAGATCCTGCGCCTTTAAAGTTGAAAAGCCGGTTGCTGAATACATCACAC  Raphanus raphanistrum subsp. maritimus

               551    -    601
UN23692        --> TTTGCTTGCCCAAAGGTGTGAGCTCCTGATAAAGCTACGACGTCGCCGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW717343       <-- TTTGCTTGCCCAAAGGTGTGAGCTCCTGATAAAGCTACGACGTCGGCGAC  Raphanus sativus var. oleiformis
EX747286       <-- TTTGCTTGCCCAAAGGTGTGAGCTCCTGATAAAGCTACGACGTCGCCGAC  Raphanus raphanistrum subsp. maritimus
EY921389       <-- ...........................GATAAAGCTACGACGTCGCCGAC  Raphanus raphanistrum subsp. landra
EY917543       --> TTTGCTTGCCCAAAGGTGTGAGCTCCTGATAAAGCTACGACGTCGCCGAC  Raphanus raphanistrum subsp. landra
FD548023       --> TTTGCTTGCCCAAAGGTGTGAGCTCCTGATAAAGCTACGACGTCGGCGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW721012       --> TTTGCTTGCCCAAAGGTGTGAGCTCCTGATAAAGCTACGACGTCGGCGAC  Raphanus sativus var. oleiformis
EX751513       --> TTTGCTTGCCCAAAGGTGTGAGCTCCTGATAAAGCTACGACGTCGCCGAC  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN23692        --> ATTAAGGCCAACAGCTACAAACTTGGCAATAATAGCGTCTAAGGGTTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW717343       <-- ATTAAGGCCAACAGCTACAAACTTGGCAATAATAGCGTCTAAGGGTTCAA
EX747286       <-- ATTAAGGCCAACAGCTACAAACTTGGCAATAATAGCGTCTAAGGGTTCAA
EY921389       <-- ATTAAGGCCAACAGCTACAAACTTGGCAATAATAGCGTCTAAGGGTTCAA
EY917543       --> ATTAAGGCCAACAGCTACAAACTTGGCAATAATAGCGTC...........
FD548023       --> ATTAAGGCCAACAGCTACAAACTTGGCAATAATAGCGTCTAAGGGTTCAA
EW721012       --> ATTAAGGCCAACAGCTACAAACTTGGCAATAATAGCGTCTAAGGGTTCAA
EX751513       --> ATTAAGGCCAACAGCTACAAACTTGGCAATAATAGCGTCTAAGGGTTCAA

               651    -    701
UN23692        --> AAGGAGATGGCAGATTATTTGCACTGCTCTGATTTGCCACAAGTCCATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW717343       <-- AAGGAGATGGCAGATTATTTGCACTGCTCTGATTTGCCACAAGTCCATCT
EX747286       <-- AAGGAGATGGCAGATTATTTGCACTGCTCTGATTTGCCACAAGTCCATCT
EY921389       <-- AAGGAGATGGCAGATTATTTGCACTGCTCTGATTTGCCACAAGTCCATCT
EY917543       --> ..................................................
FD548023       --> AAGGAGATGGCAGATTATTTGCACTGCTCTGATTTGCCACAAGTCCATCT
EW721012       --> AAGGAGATGGCAGATTATTTGCACTGCTCTGATTTGCCACAAGTCCATCT
EX751513       --> AAGGAGATGGCAGATTATTTGCACTGCTCTGATTTGCCACAAGTCCATCT

               701    -    751
UN23692        --> TTTCGCCCTAATGCCACCCTCCATTGAGGTCCTCCGCTTAAGACAACGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW717343       <-- TTTCGCCCTAATGCCACCCTCCATTGAGGTCCTCCGCTTAAGACAACGGA
EX747286       <-- TTTCGCCCTAATGCCACCCTCCATTGAGGTCCTCCGCTTAAGACAACGGA
EY921389       <-- TTTCGCCCTAATGCCACCCTCCATTGAGGTCCTCCGCTTAAGACAACGGA
EY917543       --> ..................................................
FD548023       --> TTTCGCCCTAATGCCACCCTCCATTGAGGTCCTCCGCTTAAGACAACGGA
EW721012       --> TTTCGCCCTAATGCCACCCT..............................
EX751513       --> TTTCGCCCTAATGCCACCCTCCATTGAGGTCCTCCGCTTAAGACAACGGA

               751    -    801
UN23692        --> GTCGCGAGCGGCAAGAGAGAGTATATCAGCGCAAGAAACAACACCAGGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW717343       <-- GTCGCGAGCGGCTAGAGAGAGTATATCAGCGCAAGAAACAACACCAGGAC
EX747286       <-- GTCGCGAGCGGCAAGAGAGAGTATATCAGCGCAAGAAACAACACCAGGAC
EY921389       <-- GTCGCGAGCGGCAAGAGAGAGTATATCAGCGCAAGAAACAACACCAGGAC
EY917543       --> ..................................................
FD548023       --> GTCGCGAGCGGCTAGAGAGAGTATATCAGCGCAAG...............
EW721012       --> ..................................................
EX751513       --> GTCGCGAGCGGCAAGAGAGAGTATATCAGCGCAAGAAACA-CACCAGGAC

               801    -    851
UN23692        --> ATGCGTATTCCACAGCGGCTTTGATAGTATCAATTAATTCAAATCCTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW717343       <-- ATGCGTATTCCACAGCGGCTTTGATAGTATCAATTAATTCAAATCCTCTG
EX747286       <-- ATGCGTATTCCACAGCGGCTTTGATAGTATCAATTAATTCAAATCCTCTG
EY921389       <-- ATGCGTATTCCACAGCGGCTTTGATAGTATCAATTAATTCAAATCCTCTG
EY917543       --> ..................................................
FD548023       --> ..................................................
EW721012       --> ..................................................
EX751513       --> ATGCGT............................................

               851    -    901
UN23692        --> GCAGAGTTCAGATTTGGTAACGCTAATTTCTCGCTGTCGTCTCCATCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW717343       <-- GCAGAGTTCAGATTTGGTAACGCTAATTTCTCGCTGTCGTCTCCATCCAA
EX747286       <-- GCAGAGTTCAGATTTGGTAACGCTAATTTCTCGCTGTCGTCTCCATCCAA
EY921389       <-- GCAGAGTTCAGATTTGGTAACGCTAATTTCTCGCTGTCGTCTCCATCCAA
EY917543       --> ..................................................
FD548023       --> ..................................................
EW721012       --> ..................................................
EX751513       --> ..................................................

               901    -    951
UN23692        --> CAATACAGACGCATCGCACCCATTAACGAAACAGTCATGGAAATGAAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW717343       <-- CAATACAGACGCATCGCACCCATTAACGAAACAGTCATGGAAATGAAGAC
EX747286       <-- CAATACAGACGCATCGCACCCATTAACGAAACAGTCATGGAAATGAAGAC
EY921389       <-- CAATACAGACGCATCGCACCCATTAACGAAACAGTCATGGAAATGAAGAC
EY917543       --> ..................................................
FD548023       --> ..................................................
EW721012       --> ..................................................
EX751513       --> ..................................................

               951    -   1001
UN23692        --> GAATGAGAGAAGCAGCCATCCGTGTATCGGCCTTCAGGGCGATCATAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW717343       <-- GAATGAGAGAAGCAGCCATCCGTGTATCGGCCTTCAGGGCGACCATAACT
EX747286       <-- GAATGAGAGAAGCAGCCATCCGTGTATCGGCCTTCAGGGCGATCATAACT
EY921389       <-- GAATGAGAGAAGCAGCCATCCGTGTATCGGCCTTCAGGGCGATCATAACT
EY917543       --> ..................................................
FD548023       --> ..................................................
EW721012       --> ..................................................
EX751513       --> ..................................................

               1001   -   1051
UN23692        --> TGTCTGCGGACAATTGGTACAAGATACGGGCATGATTTAGCGTAAAGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW717343       <-- TGTCTGCGGACAATTGGTACAAGATACGGGCATGATTTAGCGTAAATGTT
EX747286       <-- TGTCTGCGGACAATTGGTACAAGATACGGGCATGATTTAGCGTAAAGGTT
EY921389       <-- TGTCTGCGGACAATTGGTACAAGATACGGGCATGATTTAGCGTAAAGGTT
EY917543       --> ..................................................
FD548023       --> ..................................................
EW721012       --> ..................................................
EX751513       --> ..................................................

               1051   -   1101
UN23692        --> AGGGTTTAGCTGTGCCTTAGCCCCTGAACAAAGCATACACAGGGTGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW717343       <-- AGGGTTTAGCTc......................................
EX747286       <-- AGGGTTTAGCTGTGCCTTAGCCCCTGAACAAAGCATACACAGGGTGAAAA
EY921389       <-- AGGGTTTAGCTGTGCCTTAGCCCCTGAACAAAGCATACACAGGGTGAAAA
EY917543       --> ..................................................
FD548023       --> ..................................................
EW721012       --> ..................................................
EX751513       --> ..................................................

               1101   -   1151
UN23692        --> CAGTAAGCAAGACATGTTCTCCCATTGTCTATAAGATGGCTTGTTTAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW717343       <-- ..................................................
EX747286       <-- CAGTAAGCAAGACATGTTCTCCCATTGTCTATAAGATGGCTTGTTTAGAT
EY921389       <-- CAGTAAGCAAGACATGTTCTCCCATTGTCTATAAGATGGCTTGTTTAGAT
EY917543       --> ..................................................
FD548023       --> ..................................................
EW721012       --> ..................................................
EX751513       --> ..................................................

               1151   -   1201
UN23692        --> GAGGTACTAGAACGATATAGTTT....
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW717343       <-- ...........................
EX747286       <-- GAGGTACTAGAACGATATAGTTTactc
EY921389       <-- GAGGTACTAGAACGATATAGTTTcc..
EY917543       --> ...........................
FD548023       --> ...........................
EW721012       --> ...........................
EX751513       --> ...........................