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Alignment for radish unigene UN24365

               1      -     51
UN24365        --> GTAGAACTGATTCCACATACAGGAAACCTCAAATAGCACGAGTCTTTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527127       <-- ..................................................
EY922928       <-- ..................................................
EY923895       <-- ..................................................
FD579919       <-- ..................................................
EV531444       --> GTAGAACTGATTCCACATACAGGAAACCTCAAATAGCACGAGTATTTACA
FY434856       --> ..gagACTGATTCC-CATACAGGAAACCTCAAATAGCACGAGTCTTTACA
EY918799       --> ...............................................ACA
EY919628       --> ................................................CA
FD583813       --> ..................................................

               51     -    101
UN24365        --> TAGTTAAATTAAACTGATCATTAATGAATTAAAGGATGCATAATTGTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527127       <-- ..................................................
EY922928       <-- ..................................................
EY923895       <-- ..................................................
FD579919       <-- ..................................................
EV531444       --> TAGTTAAATTAAACTGATCATTAATGAATTAAAGGATGCATAATTGTTGA
FY434856       --> TAGTTAAATTAAACTGATCATTAATGAATTAAAGGATGCATAATTGTTGA
EY918799       --> TAGTTAAATTAAACTGATCATTAATGAATTAAAGGATGCATAATTGTTGA
EY919628       --> TAGTTAAATTAAACTGATCATTAATGAATTAAAGGATGCATAATTGTTGA
FD583813       --> .....AAATTAAACTGATCATTAATGAATTAAAGGATGCATAATTGTTGA

               101    -    151
UN24365        --> GCTGACAATTGAACAACACAAGAGAACAACACAGTTTCCCTGATAAATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527127       <-- ..................................................
EY922928       <-- ..................................................
EY923895       <-- ..................................................
FD579919       <-- ..................................................
EV531444       --> GCTGACAATTGAACAACACAAGAGAACAACACAGTTTCCCTGATAAATCA
FY434856       --> GCTGACAATTGAACAACACAAGAGAACAACACAGTTTCCCTGATAAATCA
EY918799       --> GCTGACAATTGAACAACACAAGAGAACAACACAGTTTCCCTGATAAATCA
EY919628       --> GCTGACAATTGAACAACACAAGAGAACAACACAGTTTCCCTGATAAATCA
FD583813       --> GCTGACAATTGAACAACACAAGAGAACAACACAGTTTCCCTGATAAATCA

               151    -    201
UN24365        --> AGTTGAATCCTCGAACAATGTAATTTCCTCAACAACCTTGGCCACATTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527127       <-- ..................................................
EY922928       <-- ..................................................
EY923895       <-- ..................................................
FD579919       <-- ..................................................
EV531444       --> AGTTGAATCCTCGAACAATGTAATTTCCTCAACAACCTTGGCCACATTTC
FY434856       --> AGTTGAATCCTCGAACAATGTAATTTCCTCAACAACCTTGGCCATATTTC
EY918799       --> AGTTGAATCCTCGAACAATGTAATTTCCTCAACAACCTTGGCCACATTTC
EY919628       --> AGTTGAATCCTCGAACAATGTAATTTCCTCAACAACCTTGGCCACATTTC
FD583813       --> AGTTGAATCCTCGAACAATGTAATTTCCTCAACAACCTTGGCCATATTTC

               201    -    251
UN24365        --> CTGTTACTTGTACCCAACTTTCTACTACTTTCTTGATCTTTCCATCTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527127       <-- ..................................................
EY922928       <-- ..................................................
EY923895       <-- ..................................................
FD579919       <-- ..................................................
EV531444       --> CTGTTACTTGTACCCAACTTTCTACTACTTTCTTGATCTTTCCATCTAAA
FY434856       --> CTGTTACTTGTACCCAACTTTCTACTACTTTCTTGATCTTTCCATCTAAA
EY918799       --> CTGTTACTTGTACCCAACTTTCTACTACTTTCTTGATCTTTCCATCTAAA
EY919628       --> CTGTTACTTGTACCCAACTTTCTACTACTTTCTTGATCTTTCCATCTAAA
FD583813       --> CTGTTACTTGTACCCAACTTTCTACTACTTTCTTGATCTTTCCATCTAAA

               251    -    301
UN24365        --> ATCTCCACCAATGTAAAAGCTCTTACTGTGCCGCCACTCGCAGACTCCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527127       <-- ..................................................
EY922928       <-- ..................................................
EY923895       <-- ..................................................
FD579919       <-- ..................................................
EV531444       --> ATCTCCACCAATGTAAAAGCTCTTACTGTGCCGCCACTCGCAGACTCCGC
FY434856       --> ATCTCCACCAATGTAAAAGCTCTTACTGTGCCGCCACTCGCAGACTCCGC
EY918799       --> ATCTCCACCAATGTAAAAGCTCTTACTGTGCCGCCACTCGCAGACTCCGC
EY919628       --> ATCTCCACCAATGTAAAAGCTCTTACTGTGCCGCCACTCGCAAACTCCGC
FD583813       --> ATCTCCACCAATGTAAAAGCTCTTACTGTGCCGCCACTCGCAAACTCCGC

               301    -    351
UN24365        --> CGGTGTTTCATTTGTCTCTTTAACCCTCGGGACTATTGCACCGTTCAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527127       <-- ..................TTTAACCCTCGGGACTATTGCAC-GTTCAGAT
EY922928       <-- ..................................................
EY923895       <-- ..................................................
FD579919       <-- ..................................................
EV531444       --> CGGTGTTTCATTTGTCTCTTTAACCCTCGGGACTATTGCACCGTTCAGAT
FY434856       --> CGGTGTTTCATTTGTCTCTTTAACCCTCGGGACTATTGCACCATTCAGAT
EY918799       --> CGGTGTTTCATTTGTCTCTTTAACCCTCGGGACTATTGCACCGTTCAGAT
EY919628       --> CGGTGTTTCATTTGTCTCTTTAACCCTCGGGACTATTGCACCGTTCAAAT
FD583813       --> CGGTGTTTCATTTGTCTCTTTAACCCTCGGGACTATTGCACCATTCAAAT

               351    -    401
UN24365        --> AAACAGTCTTGTTGTCGCTATCTTGCACAAGCATTTTTCGGTTTCCTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527127       <-- AAACAGTCTTGTTGTCGCTATCTTGCACAAGCATTTTTCGGTTTCCTTTC
EY922928       <-- ..................................................
EY923895       <-- ..................................................
FD579919       <-- ..................................................
EV531444       --> AAACAGTCTTGTTGTCGCTATCTTGCACAAGCATTTTTCGGTTTCCTTTC
FY434856       --> AAACAATCTTGTTGTCACTATCTTTCACAAGCATTTTCCGGTTTCCTTTC
EY918799       --> AAACAGTCTTGTTGTCGCTATCTTGCACAAGCATTTTTCGGTTTCCTTTC
EY919628       --> AAACAGTCTTGTTGTCGCTATCTTGCACAAGCATTTTTCGGTTTCCTTTC
FD583813       --> AAACAATCTTGTTGTCACTATCTTTCACAAGCATTTTCCGGTTTCC....

               401    -    451
UN24365        --> CCACCGTCAAGCTCCTTATGCATGTGTCCAAACACAACTAAAGGAACAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527127       <-- CCACCGTCAAGCTCTTTATGCATGTGTCCAAACACAACTAAAGGAACAGA
EY922928       <-- ..................................................
EY923895       <-- ..................................................
FD579919       <-- ..................................................
EV531444       --> CCACCGTCAAGCTCCTTATGCATGTGTCCAAACACAACTAAAGGAACAGA
FY434856       --> CCACCGTCAAGCTCCTTGTGCATGTGACCAAACACAACTAAAGGAACAGA
EY918799       --> CCACCGTCAAGCTCCTTATGCATGTGTCCAAACACAACTAAAGGAACAGA
EY919628       --> CCACCGTCAAGCTCCTTATGCATGTGTCCAAACACAACTAAAGGAACAGA
FD583813       --> ..................................................

               451    -    501
UN24365        --> CAACTCCGTCGTCTCCTTCAACTGGCGTAACGCCTGCTCTAGATCTGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527127       <-- CAACTCCGTCGTCTCCTTCAACTGGCATAACGCCTGCTCTAGATCTGGAT
EY922928       <-- ..................................................
EY923895       <-- ..................................................
FD579919       <-- ..................................................
EV531444       --> CAACTCCGTCGTCTCCTTCAACTGGCATAACGCCTGCTCTAGATCTGGAT
FY434856       --> CAACTCCGTCGTCTCCTTCAACTGGCGTAACGCCTGCTCTAGATCTGGAT
EY918799       --> CAACTCCGTCGTCTCCTTCAACTGGCGTAACGCCTGCTCTAAATCTGGAT
EY919628       --> CAACTCCGTCGTCTCCTTAAACTGGCGTAACGCCTGCTCTAGATCTGGAT
FD583813       --> ..................................................

               501    -    551
UN24365        --> CACCATGGTCACCGCCTTCGACAGACCAGTCTCTTCCACATATATCCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527127       <-- CACCATGGTCACCGCCTTCGACAGACCAGTCTCTTCCACATATATCCTCT
EY922928       <-- .................TCGACAGACCAGTCTCTTCCACATATATCCTCT
EY923895       <-- ...................GACAGACCAGTCTCTTCCACATATATCCTCT
FD579919       <-- ..................................................
EV531444       --> CACCATGGTCACCGCCTTCGACAGACCAGTCTCTTCCACATATATCCTCT
FY434856       --> CACCATGGTCACCGCCTTCGACAGACCAGTCTTTTCCACATATATCCTCT
EY918799       --> CACCATGGTCACCGCCTTCGACAGACCAGTCTCTTCCACATATATCCTCT
EY919628       --> CACCATGGTCACCGCCTTCGACAGACCAGTCTCTTCCACATATATCCTCT
FD583813       --> ..................................................

               551    -    601
UN24365        --> GCCTGAGAACCAAGACCTGTTGGCCCGTTATGCGCAAGAACTATAACCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527127       <-- GCCTGAGAACCAAGACCTGTTGGCCCGTTATGCGCAAGAACTATAACCCC
EY922928       <-- GCCTGAGAACCAAGACCTGTTGGCCCGTTATGCGCAAGAACTATAACCCC
EY923895       <-- GCGTGAGAACCAAGACCTGTTGGCCCGTTATGCGCAAGAACTATAACCCC
FD579919       <-- .....AGAACCAAGACCTGTTGGCCCGTTATGCGCAAGAATTATAACCCC
EV531444       --> GCCTGAGAACCAAGACCTGTTGGCCCGTTATGCGCAAGAACTATAACCCC
FY434856       --> GCCTGAGAACCAAGACCTGTTGGCCCGTTATGCGCAAGAATTATAACCCC
EY918799       --> GCCTGAGAACCAAGACCTGTTGGCCCGTTATGCGCAAGAACTATAACCCC
EY919628       --> GCCTGAGAACCAAGACCTGTTGGCCCGTTATGCGCAAGAACTATAACCCC
FD583813       --> ..................................................

               601    -    651
UN24365        --> ATGATCTTTCGGTGTTCCAAGTGCAGCTCGACAAATACTCCCAGCACTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527127       <-- ATGATCTTTCGGTGTTCCATGTGCAGCTCGACAAATACTCCCAGCACTGG
EY922928       <-- ATGATCTTTCGGTGTTCCAAGTGCAGCTCGACAAATACTCCCAGCACTGG
EY923895       <-- ATGATCTTTCGGTGTTCCAAGTGCAGCTCGACAAATACTCCCAGCACTGG
FD579919       <-- ATGATCTTTCGGTGTTCCAAGTGCAGCTCGACAAATACTCCCAGCACTGG
EV531444       --> ATGATCTTTCGGTGTTCCATGTGCAGCTCGACAAATACTCCCAGCACTGG
FY434856       --> ATGATCTTTCGGTGTTCCAAGTGCAGCTCGACAAATACTCCCAGCACTGG
EY918799       --> ATGATCTTTCGGTGTTCCAAGTGCAGCTCGACAAATACTCCCAGCACTGG
EY919628       --> ATGATCTTTCGGTGTTCCAAGTGCAGCTCGACAAATACTCCCAGCACTGG
FD583813       --> ..................................................

               651    -    701
UN24365        --> CATTCAAGTTACGAACTCCATACCTCTGGGCAAGCAGTTTTTT-CTGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527127       <-- CATTCAAGTTACGAACTCCATACCTCTGGGCAAGCAGTTTTTT-CTGAAA
EY922928       <-- CATTCAAGTTACGAACTCCATACCTCTGGGCAAGCAGTTTTTT-CTGAAA
EY923895       <-- CATTCAAGTTACGAACTCCATACCTCTGGGCAAGCAGTTTTTT-CTGAAA
FD579919       <-- CATTCATGTTACGAACTCCATACCTCTGGGCAAGCAGTTTTTT-CTGAAA
EV531444       --> CATTCAAGTTACGAACTCCATACCTCTGGGCAAGCAGTTTTTT-CTGAAA
FY434856       --> CATTCATGTTACGAACTCCATACCTCTGGGCAAGCAGTTTTTT-CTGAAA
EY918799       --> CATTCAAGTTACGAACTCCATACCTCTGGGCAAGCAGTTTTTT-CTGAAA
EY919628       --> CATTCAAGTTACGAACTCCATACCTCTGGGCAAGCAGTTTTTTTCTGAAA
FD583813       --> ..................................................

               701    -    751
UN24365        --> CAGTTTATTACCCCCATGTGAAAAGGGGCGACCACCAACAACACTGAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527127       <-- CAGTTTATTACCCCCATGTGAAAAGGGGCGAGCACCAACAACACTGAGCT  Raphanus raphanistrum subsp. maritimus
EY922928       <-- CAGTTTATTACCCCCATGTGAAAAGGGGCGACCACCAACAACACTGAGCC  Raphanus raphanistrum subsp. landra
EY923895       <-- CAGTTTATTACCCCCATGTGAAAAGGGGCGACCACCAACAACACTGAGCC  Raphanus raphanistrum subsp. landra
FD579919       <-- CAGTTTATCTCCCCCATGTGAAAAGGGGCGACCACCAACAACAGTGAGCT  Raphanus sativus cv Rat-Tail Radish #3870
EV531444       --> CAGTTTATTACCCCCATGTGAAAAGGGGCGAGCACCAACAACACTGAGCT  Raphanus raphanistrum subsp. maritimus
FY434856       --> CAGTTTATCTCCCCCATGTGAAAAGGGGCGACCACCAACAACAGTGAGCT  Raphanus sativus cv GSK3-1
EY918799       --> CAGTTTATTACCCCCATGTGAAAAGGGGCGACCACCAACAACACTGAGCC  Raphanus raphanistrum subsp. landra
EY919628       --> CAGTTTATTACCCCCATGTGAAAAGGGG......................  Raphanus raphanistrum subsp. landra
FD583813       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               751    -    801
UN24365        --> TAAGTGAGGGGAAGTCCATGCGTTGATATCCTACGTGCTCATCACCAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527127       <-- TAAGTGAGGGGAAGTCCATGCGTTGATATCCTACGTGCTCATCACCAAGG  Raphanus raphanistrum subsp. maritimus
EY922928       <-- TAAGTGAGGGGAAGTCCTTGCGTTGATATCCTACGTGCTCATCACCAAGG  Raphanus raphanistrum subsp. landra
EY923895       <-- TAAGTGAGGGGAAGTCCTTGCGTTGA--TCCTACGTGCTCATCACCAAGG  Raphanus raphanistrum subsp. landra
FD579919       <-- TAAGTGAGGGGAAGTCCATGCGTTGATATCCTACGTGCTCATCACCAAGG  Raphanus sativus cv Rat-Tail Radish #3870
EV531444       --> TAAGTGAGGGGAAGTCCATGCGTTGATATCCTACGTGCTCATCACCAAGG  Raphanus raphanistrum subsp. maritimus
FY434856       --> TAAGTGAGGGGAAGTCCATGCGTTGATATCCTACGTGCTCATCACCAAGG  Raphanus sativus cv GSK3-1
EY918799       --> TAAGTGAGGGGAAGTCCTTGCGTTGATATCCTACGTGCTCATCACCAAGG  Raphanus raphanistrum subsp. landra
EY919628       --> ..................................................  Raphanus raphanistrum subsp. landra
FD583813       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               801    -    851
UN24365        --> ATATCAAGTTGCATAAGAACATCGCTATCTTTGTCTTTCGAGTCCTGGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527127       <-- ATATCAAGTTGCATAAGAACATCGTTATCTTTATCTTTCGAGTCCTGGGC  Raphanus raphanistrum subsp. maritimus
EY922928       <-- ATATGAAGTTGCATAAGAACATCGCTATCTTTGTCTTTCGAGTCCTGGGC  Raphanus raphanistrum subsp. landra
EY923895       <-- ATATGAAGTTGCATAAGAACATCGCTATCTTTGTCTTTCGAGTCCTGGGC  Raphanus raphanistrum subsp. landra
FD579919       <-- ATATCAAGTTGCATAAGAACATCGTTATCTTTATCTTTCGAGTCCTGGGC  Raphanus sativus cv Rat-Tail Radish #3870
EV531444       --> ATATCAAGTTGCATAAGAACATCGTTATCTTTATCTTTCGAGTCCTGGGG  Raphanus raphanistrum subsp. maritimus
FY434856       --> ATATCAAGTTGCATAAGAACATCGCTATCTTTGTCTTTCGAGTCCTGG..  Raphanus sativus cv GSK3-1
EY918799       --> ATATGAAGTTGCATAAGAACATCGCTATCTTTGTCTTTCGAGTCCTGGGC  Raphanus raphanistrum subsp. landra
EY919628       --> ..................................................  Raphanus raphanistrum subsp. landra
FD583813       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               851    -    901
UN24365        --> GGTGCTCCAAGCATCATGATTGCCCAATATAACAGCTTTAGGGAAAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527127       <-- GGTGCTCCAAGCATCACGATTGCCCAATATAACAGCTTTAGGGAAAGGAA
EY922928       <-- GGTGCTCCAAGCATCATGATTGCCCAATATAACAGCTTTAGGGAAAGGAA
EY923895       <-- GGTGCTCCAAGCATCATGATTGCCCAATATAACAGCTTTAGGGAAAGGAA
FD579919       <-- GGTGCTCCAAGCATCATGATTGCCCAATATAACAGCTTTAGGGAAAGGAA
EV531444       --> GGTGCTCCAAGCATCACGATTGCCCA-TAT-ACAGCT.............
FY434856       --> ..................................................
EY918799       --> GGTGCTCCAAGCATCATGATTGCC..........................
EY919628       --> ..................................................
FD583813       --> ..................................................

               901    -    951
UN24365        --> GAGCAGCAACGCTCCGCACAAGTGGCGCATTCACCCTCTCACCAAAATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527127       <-- GAGCAGCAACGCTCCGCACAAGTGGCGCATTCACCCTCTCACCAAAATCA
EY922928       <-- GAGCAGCAACGCTCCGCACAAGAGGCACATTCACCCTCTCACCAAAATCA
EY923895       <-- GAGCAGCAACGCTCCGCACAAGAGGCACATTCACCCTCTCACCAAAATCA
FD579919       <-- GAGCAGCAACGCTCCGCACAAGTGGCGCATTCACCCTCTCACCAAAATCA
EV531444       --> ..................................................
FY434856       --> ..................................................
EY918799       --> ..................................................
EY919628       --> ..................................................
FD583813       --> ..................................................

               951    -   1001
UN24365        --> CCTGTGAAGAGCACCAATTGCGGCTGTAGTAGCTGAAGAGCCTTTCGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527127       <-- CCTGTGAAGAGCACCAATTGCGGCTGTAGTAGCTGAAGAGCCTTTCGATC
EY922928       <-- CCTGTGAAGAGCACCAATTGCGGCTGTAGTAGCTGAAGAGCCTTTCGATC
EY923895       <-- CCTGTGAAGAGCACCAATTGCGGCTGTAGTAGCTGAAGAGCCTTTCGATC
FD579919       <-- TCTGTGAAGAGCACCAATTGCGGCTGTAGTAGCTGAAGAGCCTTTCGATC
EV531444       --> ..................................................
FY434856       --> ..................................................
EY918799       --> ..................................................
EY919628       --> ..................................................
FD583813       --> ..................................................

               1001   -   1051
UN24365        --> TTCATCTTGATCCCAGAAGCCATGGATGTCTCCCACGATGGCGATTCGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527127       <-- TTCATCTTGATCCCAGAAGCCATGGATGTCTCCCACGATGGCGATTCGAA
EY922928       <-- TTC-TCTTGATCCCAGAAGCCATGGATGTCTCCCACGATGGCGATTCGAA
EY923895       <-- TTCATCTTGGTCCCAGAAGCCATGGATGTCTCCCACGATGGCGATTCGAA
FD579919       <-- TTCATCTTGATCCCAGAAGCCATGGATGTCTCCCACGATGGCGATTCGAA
EV531444       --> ..................................................
FY434856       --> ..................................................
EY918799       --> ..................................................
EY919628       --> ..................................................
FD583813       --> ..................................................

               1051   -   1101
UN24365        --> CAAGAGAAGAGGATGCCATTGGAGACCAGAATCAGAACTTGTCTCTTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527127       <-- CAAGAGAAGAGGATGCCATTGGAGACCAGAATCAGAACTTGTCTCTTGCT
EY922928       <-- CAAGAGAAGAGGATGCCATTGGAGACCAGAATCAGAACTTGTCTCTTGCT
EY923895       <-- CAAGAGAAGAGGATGCCATTGGAGACCAGAATCAGAACTTGTCTCTTGCT
FD579919       <-- CAAGAGAAGAGGATGCCATTGGAGACCAGAATCAGAACTTGTCTCTTGCT
EV531444       --> ..................................................
FY434856       --> ..................................................
EY918799       --> ..................................................
EY919628       --> ..................................................
FD583813       --> ..................................................

               1101   -   1151
UN24365        --> CGTTTCTTGTGCAAGGAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~
EV527127       <-- CGTTTCTTGTGCAAGG.....
EY922928       <-- CGTTTCTTGTGCAAGGAAAAA
EY923895       <-- CGTTTCTTGTGCAAGGAAAAA
FD579919       <-- CGTTTCTTGTcc.........
EV531444       --> .....................
FY434856       --> .....................
EY918799       --> .....................
EY919628       --> .....................
FD583813       --> .....................