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Alignment for radish unigene UN24388

               1      -     51
UN24388        --> GGATTCAAATTGAGAAGTAACGATAAATGGATAAAAACGCAAGAAGCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720714       <-- ..................................................
EV547201       <-- ..................................................
FD985542       <-- ..................................................
FD936168       <-- ..................................................
EY917388       <-- ..................................................
FD555069       <-- ..................................................
EV552253       --> GGATTCAAATTGAGAAGTAACGATAAATGGATAAAAACGCAAGAAGCTCA
FD940238       --> GGATTCAAATTGAGAAGTAACGATAAATGGATAAAAACGCAAGAAGCTCA
EY921189       --> ....ggAAATTGAGAAGTAACGATAAATGGATAAAAACGCAAGAAGCTCA
FD559347       --> ........ggattcaaattgagaagtaacGATAAAAACGCAAGAAGCTCA
EV567285       --> ..................................................
EW716612       --> ..................................................

               51     -    101
UN24388        --> CCGTCTTTCCCTTTGGCCGGTCGTGTAGCCATAGTGACTGGAGCCACAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720714       <-- ..................................................
EV547201       <-- ..................................................
FD985542       <-- ..................................................
FD936168       <-- ..................................................
EY917388       <-- ..................................................
FD555069       <-- ..................................................
EV552253       --> CCGTCTTTCCCTTTGGCCGGTCGTGTAGCCATAGTGACTGGAACCACAAG
FD940238       --> CCGTCTTTCCCTTTGGCCGGTCGTGTAGCCATAGTGACTGGAGCCACAAG
EY921189       --> CCGTCTTTCCCTTTGGCCGGTCGTGTAGCCATAGTGACTGGAGCCACAAG
FD559347       --> CCGTCTTTCCCTTTGGCCGGTCGTGTAGCCATAGTGACTGGAGCCACAAG
EV567285       --> ..................................................
EW716612       --> ..................................................

               101    -    151
UN24388        --> AGGCATCGGCCGTGCGATTGCCATTCACCTCCACAGCTTTGGCGCAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720714       <-- .............................................AAGAG
EV547201       <-- ..................................................
FD985542       <-- ..................................................
FD936168       <-- ..................................................
EY917388       <-- ..................................................
FD555069       <-- ..................................................
EV552253       --> AGGCATCGGCCGTGCGATTGCCATTCACCTCCACAGCTTTGGCGCAAGAG
FD940238       --> AGGCATCGGCCGTGCGATTGCCATTCACCTCCACAGCCTTGGCGCAAGAG
EY921189       --> AGGCATCGGCCGTGCGATTGCCATTCACCTCCACAGCTTTGGCGCAAGAG
FD559347       --> AGGCATCGGCCGTGCGATTGCCATTCACCTCCACAGCTTTGGCGCAAGAG
EV567285       --> .................................gAGCTTTGGCGCAAGAG
EW716612       --> ..................................................

               151    -    201
UN24388        --> TCACCCTCAATTATGTCTCGAGCTCATCAGAAGCTGAACTTCTGGCTTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720714       <-- TCACCCTCAATTATGTCTCGAGCTCATCAGAAGCTGAACTTCTGGCTTCG
EV547201       <-- ...........TATGTCTCGAGCTCATCAGAAGCTGAACTTCTGGCTTCG
FD985542       <-- ................................GCTGAACTTCTGGCTTCG
FD936168       <-- ..................................................
EY917388       <-- ..................................................
FD555069       <-- ..................................................
EV552253       --> TCACCCTCAATTATGTCTCGAGCTCATCAGAAGCTGAACTTCTGGCTTCG
FD940238       --> TCACCCTCAATTATGTCTCGAGCTCATCAGAAGCTGAACTTCTGGCTTCG
EY921189       --> TCACCCTCAATTATGTCTCGAGCTCATCAGAAGCTGAACTTCTGGCTTCG
FD559347       --> TCACCCTCAATTATGTCTCGAGCTCATCAGAAGCTGAACTTCTGGCTTCG
EV567285       --> TCACCCTCAATTATGTCTCGAGCTCATCAGAAGCTGAACTTCTGGCTTCG
EW716612       --> ..................................................

               201    -    251
UN24388        --> GAACTAAACGCGTCATCTCAACAAAACTCAGCAATAGCAGTGAGAGCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720714       <-- GAACTAAACGCGTCATCTCAACAAAACTCAGCAATAGCAGTGAGAGCAGA
EV547201       <-- GAACTAAACGCGTCATCTCAACAAAACTCAGCAATAGCAGTGAGAGCAGA
FD985542       <-- GAACTAAACGCGTCATCTCAACAAAACTCAGCAATAGCAGTGAGAGCAGA
FD936168       <-- GAACTAAACGCGTCATCTCAACAAAACTCAGCAATAGCAGTGAGAGCAGA
EY917388       <-- ............TCATCTCAACAAAACTCAGCAATAGCAGTGAGAGCAGA
FD555069       <-- ..................................................
EV552253       --> GAACTAAACGCGTCATCTCAACAAAACTCAGCAATAGCAGTGAGAGCAGA
FD940238       --> GAACTAAACGCGTCATCTCAACAAAACTCAGCAATAGCAGTGAGAGCAGA
EY921189       --> GAACTAAACGCGTCATCTCAACAAAACTCAGCAATAGCAGTGAGAGCAGA
FD559347       --> GAACTAAACGCGTCATCTCAACAAAACTCAGCAATAGCAGTGAGAGCAGA
EV567285       --> GAACTAAACGCGTCATCTCAACAAAACTCAGCAATAGCAGTGAGAGCAGA
EW716612       --> ..................................................

               251    -    301
UN24388        --> TGTTTCAGATCCTGACCAGATCAACAACTTGTTTGATCAAACCGAACAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720714       <-- TGTTTCAGATCCTGACCAGATCAATAACTTGTTTGATCAAACCGAACAAG  Raphanus sativus var. oleiformis
EV547201       <-- TGTTTCAGATCCTGACCAGATCAACAACTTGTTTGATCAAACCGAACAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985542       <-- TGTTTCAGATCCTGACCAGATCAACAACTTGTTTGATCAAACCGAACAAG  Raphanus raphanistrum subsp. landra
FD936168       <-- TGTTTCAGATCCTGACCAGATCAATAACTTGTTTGATCAAACCGAACAAG  Raphanus sativus var. oleiformis
EY917388       <-- TGTTTCAGATCCTGACCAGATCAACAACTTGTTTGATCAAACCGAACAAG  Raphanus raphanistrum subsp. landra
FD555069       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV552253       --> TGTTTCAGATCCTGACCAGATCAACAACTTGTTTGATCAAACCGAACAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940238       --> TGTTTCAGATCCTGACCAGATCAATAACTTGTTTGATCAAACCGAACAAG  Raphanus sativus var. oleiformis
EY921189       --> TGTTTCAGATCCTGACCAGATCAACAACTTGTTTGATCAAACCGAACAAG  Raphanus raphanistrum subsp. landra
FD559347       --> TGTTTCAGATCCTGACCAGATCAACAACTTGTTTGATCAAACCGAACAAG  Raphanus raphanistrum subsp. landra
EV567285       --> TGTTTCAGATCCTGACCAGATCAACAACTTGTTTGATCAAACCGAACAAG  Raphanus raphanistrum subsp. landra
EW716612       --> ...........CTGACCAGATCAATAACTTGTTTGATCAAACCGAACAAG  Raphanus sativus var. oleiformis

               301    -    351
UN24388        --> AGTTCGGATCAAAAGTTCACATTCTCATAAATTGTGCAGGTGTCTTGGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720714       <-- AGTTCGGATCAAAAGTTCACATTCTCATAAATTGTGCAGGTGTCTTGGAC
EV547201       <-- AGTTCGGATCAAAAGTTCACATTCTCATAAATTGTGCAGGTGTCTTGGAC
FD985542       <-- AGTTCGGATCAAAAGTTCACATTCTCATAAATTGTGCAGGTGTCTTGGAC
FD936168       <-- AGTTCGGATCAAAAGTTCACATTCTCATAAATTGTGCAGGTGTCTTGGAC
EY917388       <-- AGTTCGGATCAAAAGTTCACATTCTCATAAATTGTGCAGGTGTCTTGGAC
FD555069       <-- .......................CTCATAAATTGTGCAGGTGTCTTGGAC
EV552253       --> AGTTCGGATCAAAAGTTCACATTCTCATAAATTGTGCAGGTGTCTTGGAC
FD940238       --> AGTTCGGATCAAAAGTTCACATTCTCATAAATTGTGCAGGTGTCTTGGAC
EY921189       --> AGTTCGGATCAAAAGTTCACATTCTCATAAATTGTGCAGGTGTCTTGGAC
FD559347       --> AGTTCGGATCAAAAGTTCACATTCTCATAAATTGTGCAGGTGTCTTGGAC
EV567285       --> AGTTCGGATCAAAAGTTCACATTCTCATAAATTGTGCAGGTGTCTTGGAC
EW716612       --> AGTTCGGATCAAAAGTTCACATTCTCATAAATTGTGCAGGTGTCTTGGAC

               351    -    401
UN24388        --> CCAAAGTATCCATCTATATCCGAGACTACACTTGACGATTTCGAGAAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720714       <-- CCAAAGTATCCATCTATATCCGAGACTACACTTGAAGATTTCGAGAAAAC  Raphanus sativus var. oleiformis
EV547201       <-- CCAAAGTATCCATCTATATCCGAGACTACACTTGACGATTTCGAGAAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985542       <-- CCAAAGTATCCATCTATATCCGAGACTACACTTGACGATTTCGAGAAAAC  Raphanus raphanistrum subsp. landra
FD936168       <-- CCAAAGTATCCATCTATATCCGAGACTACACTTGAAGATTTCGAAAAAAC  Raphanus sativus var. oleiformis
EY917388       <-- CCAAAGTATCCATCTATATCCGAGACTACACTTGACGATTTCGAGAAAAC  Raphanus raphanistrum subsp. landra
FD555069       <-- CCAAAGTATCCATCTATATCCGAGACTACACTTGACGATTTCGAGAAAAC  Raphanus raphanistrum subsp. landra
EV552253       --> CCAAAGTATCCATCTATATCCGAGACTACACTTGACGATTTCGAGAAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940238       --> CCAAAGTATCCATCTATATCCGAGACTACACTTGAAGATTTCGAAAAAAC  Raphanus sativus var. oleiformis
EY921189       --> CCAAAGTATCCATCTATATCCGAGACTACACTTGACGATTTCGAGAAAAC  Raphanus raphanistrum subsp. landra
FD559347       --> CCAAAGTATCCATCTATATCCGAGACTACACTTGACGATTTCGAGAAAAC  Raphanus raphanistrum subsp. landra
EV567285       --> CCAAAGTATCCATCTATATCCGAGACTACACTTGACGATTTCGAGAAAAC  Raphanus raphanistrum subsp. landra
EW716612       --> CCAAAGTATCCATCTATATCCGAGACTACACTTGAAGATTTCGAGAAAAC  Raphanus sativus var. oleiformis

               401    -    451
UN24388        --> GTTCAGAACTAACACGAGAGGGGCTTTCGTGTGTTGCAAGGAAGCTGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720714       <-- GTTCAGAACTAACACGAGAGGGGCTTTCGTGTGTTGCAAGGAAGCTGCTA
EV547201       <-- GTTCAGAACTAACACGAGAGGGGCTTTCGTGTGTTGCAAGGAAGCCGCTA
FD985542       <-- GTTCAGAACTAACACGAGAGGGGCTTTCGTGTGTTGCAAGGAAGCTGCTA
FD936168       <-- GTTCAGAACTAACACGAGAGGGGCTTTCGTGTGTTGCAAGGAAGCTGCTA
EY917388       <-- GTTCAGAACTAACACGAGAGGGGCTTTCGTGTGTTGCAAGGAAGCTGCTA
FD555069       <-- GTTCAGAACTAACACGAGAGGGGCTTTCGTGTGTTGCAAGGAAGCTGCTA
EV552253       --> GTTCAGAACTAACACGAGAGGGGCTTTCGTGTGTTGCAAGGAAGCCGCTA
FD940238       --> GTTCAGAACTAACACGAGAGGGGCTTTCGTGTGTTGCAAGGAAGCTGCTA
EY921189       --> GTTCAGAACTAACACGAGAGGGGCTTTCGTGTGTTGCAAGGAAGCTGCTA
FD559347       --> GTTCAGAACTAACACGAGAGGGGCTTTCGTGTGTTGCAAGGAAGCTGCTA
EV567285       --> GTTCAGAACTAACACGAGAGGGGCTTTCGTGTGTTGCAAGGAAGCTGCTA
EW716612       --> GTTCAGAACTAACACGAGAGGGGCTTTCGTGTGTTGCAAGGAAGCTGCTA

               451    -    501
UN24388        --> AGAGGGTTGTTAGAGGAGGTGGTGGAAGAATCATTATGATGTCTACTTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720714       <-- AGAGAGTTGTTAGAGGAGGTGGTGGAAGAATCATTATGATGTTTACTTCG  Raphanus sativus var. oleiformis
EV547201       <-- AGAGGGTTGCTAGAGGAGGTGGTGGAAGAATCATTACGATGTCTACTTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985542       <-- AGAGGGTTGTTAGAGGAGGTGGTGGAAGAATCATTATGATGTCTACTTCG  Raphanus raphanistrum subsp. landra
FD936168       <-- AGAGAGTTGTTAGAGGAGGTGGTGGAAGAATCATTATGATGTCTACTTCG  Raphanus sativus var. oleiformis
EY917388       <-- GGAGGGTTGTTAGAGGAGGTGGTGGAAGAATCATTATGATGTCTACTTCG  Raphanus raphanistrum subsp. landra
FD555069       <-- AGAGGGTTGTTAGAGGAGGTGGTGGAAGAATCATTATGATGTCTACTTCG  Raphanus raphanistrum subsp. landra
EV552253       --> AGAGGGTTGCTAGAGGAGGTGGTGGAAGAATCATTACGATGTCTACTTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940238       --> AGAGAGTTGTTAGAGGAGGTGGTGGAAGAATCATTATGATGTCTACTTCG  Raphanus sativus var. oleiformis
EY921189       --> GGAGGGTTGTTAGAGGAGGTGGTGGAAGAATCATTATGATGTCTACTTCG  Raphanus raphanistrum subsp. landra
FD559347       --> AGAGGGTTGTTAGAGGAGGTGGTGGAAGAATCATTATGATGTCTACTTCG  Raphanus raphanistrum subsp. landra
EV567285       --> AGAGGGTTGTTAGAGGAGGTGGTGGAAGAATCATTATGATGTCTACTTCG  Raphanus raphanistrum subsp. landra
EW716612       --> AGAGAGTTGTTAGAGGAGGTGGTGGAAGAATCATTATGATGTCTACTTCG  Raphanus sativus var. oleiformis

               501    -    551
UN24388        --> CAGGTCGGAGCACTCTCGCCAGGTTATGGAGTCTATACCGCGTCAAAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720714       <-- CAGGTCGGAGCACTCTCGCCAGGTTATGGAGTCTATACCGCGTCAAAGGC
EV547201       <-- CAGGTCGGAGCACTCTCGCCAGGTTATGGAGTCTATACCGCGTCAAAGGC
FD985542       <-- CAGGTCGGAGCACTCTCGCCAGGTTATGGAGTCTATACCGCGTCAAAGGC
FD936168       <-- CAGGTCGGAGCACTCTCGCCAGGTTATGGAGTCTATACCGCGTCAAAGGC
EY917388       <-- CAGGTCAGAGCACTCTCGCCAGGTTATGGAGTCTATACCGCGTCAAAGGC
FD555069       <-- CAGGTCGGAGCACTCTCGCCAGGTTATGGAGTCTATACCGCGTCAAAGGC
EV552253       --> CAGGTCGGAGCACTCTCGCCAGGTTATGGAGTCTATACCGCGTCAAAGGC
FD940238       --> CAGGTCGGAGCACTCTCGCCAGGTTATGGAGTCTATACCGCGTCAAAGGC
EY921189       --> CAGGTCAGAGCACTCTCGCCAGGTTATGGAGTCTATACCGCGTCAAAGGC
FD559347       --> CAGGTCGGAGCACTCTCGCCAGGTTATGGAGTCTATACCGCGTC......
EV567285       --> CAGGTCGGAGCACTCTCGCCAGGTTATGGAGCCTATACCGCGTCAAAGGC
EW716612       --> CAGGTCGGAGCACTCTCGCCAGGTTATGGAGTCTATACCGCGTCAAAGGC

               551    -    601
UN24388        --> TGCGGTGGAAACAATGGTAAGAGTGTTGGCAAAAGAACTGAAGGGAAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720714       <-- TGCGGTGGAAACAATGGTAAGAGTGTTGGCAAAAGAACTGAAGGGAAGCC  Raphanus sativus var. oleiformis
EV547201       <-- TGCGGTGGAAACTATGGTAAGAGTGTTGGCAAAAGAACTGAAGGGAAGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985542       <-- TGCGGTGGAAACAATGGTAAGAGTGTTGGCAAAAGAACTGAAGGGAAGCC  Raphanus raphanistrum subsp. landra
FD936168       <-- TGCGGTGGAAACAATGGTAAGAGTGTTGGCAAAAGAACTGAAGGGAAGCC  Raphanus sativus var. oleiformis
EY917388       <-- TGCGATGGAAACTATGGTAAGAGTGTTGGCAAAAGAACTGAAGGGAAGCC  Raphanus raphanistrum subsp. landra
FD555069       <-- TGCGGTGGAAACAATGGTAAGAGTGTTGGCAAAAGAACTGAAGGGAAGCC  Raphanus raphanistrum subsp. landra
EV552253       --> TGCGGTGGAAACTATGGTAAGAGTGTTGGCAAAAGAACTGAAGGGAAGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940238       --> TGCGGTGGAAACAATGGTAAGAGTGTTGGCAAAAGAACTGAAGGGAAGCC  Raphanus sativus var. oleiformis
EY921189       --> TGCGATGGAAACTATGGTAAGAGTGTTGGCAAAAGAACTGAAGGGAAGCC  Raphanus raphanistrum subsp. landra
FD559347       --> ..................................................  Raphanus raphanistrum subsp. landra
EV567285       --> TGCGGTGGAAACTATGGTAAGAGTGTTGGCAAAAGAACTGAAGGGAAGCC  Raphanus raphanistrum subsp. landra
EW716612       --> TGCGGTGGAAACAATGGTAAGAGTGTTGGCAAAAGAACTGAAGGGAAGCC  Raphanus sativus var. oleiformis

               601    -    651
UN24388        --> AGATTACCGCAAACTGTGTTGCTCCAGGGCCGGTTGCGACTGAGATGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720714       <-- AGATTACCGCAAACTGTGTTGCTCCAGGGCCGGTTGCGACTGAGATGTTC
EV547201       <-- AGATTACCGCAAACTGTGTTGCTCCAGGGCCGGTTGCGACTGAGATGTTC
FD985542       <-- AGATTACCGCAAACTGTGTTGCTCCAGGGCCGGTTGCGACTGAGATGTTC
FD936168       <-- AGATTACCGCAAACTGCGTTGCTCCAGGGCCGGTTGCGACTGAGATGTTC
EY917388       <-- AGATTACCGCAAACTGTGTTGCTCCAGGGCCGGTTGCGACTGAGATGTTC
FD555069       <-- AGATTACCGCAAACTGTGTTGCTCCAGGGCCGGTTGCGACTGAGATGTTC
EV552253       --> AGATTACCGCAAACTGTGTTGCTCCAGGGCCGGTTGCGACTGAGATGTTC
FD940238       --> AGATTACCGCAAACTGCGTTGCTCCAGGGCCGGTTGCGACTGAGATGTTC
EY921189       --> AGATTACCGCAAACTGTGTTGCTCCAGGGCCGGTTGCGACTGAGATGTTC
FD559347       --> ..................................................
EV567285       --> AGATTACCGCAAACTGTGTTGCTCCAGGGCCGGTTGCGACTGAGATGTTC
EW716612       --> AGATTACCGCAAACTGTGTTGCTCCAGGGCCGGTTGCGACTGAGATGTTC

               651    -    701
UN24388        --> TATGCAGGAAAAAGTGATGAAACGGTGAAGATGCTTGCAAGCGCGTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720714       <-- TATGCAGGAAAAAGTGATGAAACGGTGAAGATGCTTGCAAGCGCGTCTCC
EV547201       <-- TATGCAGGAAAAAGTGATGAAACGGTGAAGATGCTTGCAAGCGCGTCTCC
FD985542       <-- TATGCAGGAAAAAGTGATGAAACGGTGAAGATGCTTGCAAGCGCGTCTCC
FD936168       <-- TATGCAGGAAAAAGTGATGAAACGGTGAAGATGCTTGCAAGCGCGTCTCC
EY917388       <-- TATGCAGGAAAAAGTGATGAAACGGTGAAGATGCTTGCAAGCGCGTCTCC
FD555069       <-- TATGCAGGAAAAAGTGATGAAACGGTGAAGATGCTTGCAAGCGCGTCTCC
EV552253       --> TATGCAGGAAAAAGTGATGAAACGGTGAAGATGCTTGCAAGCGCGTCTCC
FD940238       --> TATGCAGAAAAA......................................
EY921189       --> TATG..............................................
FD559347       --> ..................................................
EV567285       --> TATGCAGGAAAAAGTGATGAAACGGTGAAGATGCTTGCAAGCGCGTCTCC
EW716612       --> TAT...............................................

               701    -    751
UN24388        --> AATGGGGAGGATTGGCGAGCCAAAGGATGTTGCGGAGATTGTAGGATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720714       <-- AATGGGGAGGATTGGCGAGCCAAAGGATGTTGCGGAGATTGTAGGATTTT
EV547201       <-- AATGGGGAGGATTGGCGAGCCAAAGGATGTTGCGGAGATTGTAGGATTTT
FD985542       <-- AATGGGGAGGATTGGCGAGCCAAAGGATGTTGCGGAGATTGTAGGATTTT
FD936168       <-- AATGAGGAGGATTGGCGAGCCGAAGGATGTTGCGGAGATTGTAGGATTTT
EY917388       <-- AATGGGGAGGATTGGCGAGCCAAAGGATGTTGCGGAGATTGTAGGATTTT
FD555069       <-- AATGGGGAGGATTGGCGAGCCAAAGGATGTTGCGGAGATTGTAGGATTTT
EV552253       --> AATGGGGAGGATTGGCGAGCCAAAGGATGTTGCGGAGATT..........
FD940238       --> ..................................................
EY921189       --> ..................................................
FD559347       --> ..................................................
EV567285       --> AATGGGGAGGATTGGCGAGCCAAAGGATGTTGCGGAGATTGTACGATTTT
EW716612       --> ..................................................

               751    -    801
UN24388        --> TGGCAGGTGATGGTGGGGAATGGATCAACGGTCAGGTTATTAGGGCCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720714       <-- TGGCAGGTGATGGTGGGGAATGGATCAGCGGTCAGGTTATTAGGGCCAAT
EV547201       <-- TGGCAGGTGATGGTGGGGAATGGATCAACGGTCAGGTTATTAGGGCCAAT
FD985542       <-- TGGCAGGTGATGGTGGGGAATGGATCAACGGTCAGGTTATTAGGGCCAAT
FD936168       <-- -GGCAGGTGATGGTGGGGAATGGATCAACGGTCAGGTTATTAGGGCCAAT
EY917388       <-- TGGCAGGTGATGGTGGGGAATGGATCAACGGTCAGGTTATTAGGGCCAAT
FD555069       <-- TGGCAGGTGATGGTGGGGAATGGATCAACGGTCAGGTTATTAGGGCCAAT
EV552253       --> ..................................................
FD940238       --> ..................................................
EY921189       --> ..................................................
FD559347       --> ..................................................
EV567285       --> TGGCAG-TGATGGTGGGGAATGGATCAACGGTCAGtta............
EW716612       --> ..................................................

               801    -    851
UN24388        --> GGAGGCTTTGTTGTGTGAAAATAGGAAGATTAAACTATAAAATATTTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720714       <-- GGAGGCTTTGTTGTGTGAAAATAGGAAGATTAAACTATAAAATATTTGAT
EV547201       <-- GGAGGCTTTGTTGTGTGAAAATAGGAAGATTAAACTATAAAATATTTGAT
FD985542       <-- GGAGGCTTTGTTGTGTGAAAATAGGAAGATTAAACTATAAAATATTTGAT
FD936168       <-- GGAGGCTTTGTTGTGTGAAAATAGGAAGATTAAACTATAAAATATTTGAT
EY917388       <-- GGAGGCTTTGTTGTGTGAAAATAGGAAGATTAAACTATAAAATATTTGAT
FD555069       <-- GGAGGCTTTGTTGTGTGAAAATAGGAAGATTAAACTATAAAATATTTGAT
EV552253       --> ..................................................
FD940238       --> ..................................................
EY921189       --> ..................................................
FD559347       --> ..................................................
EV567285       --> ..................................................
EW716612       --> ..................................................

               851    -    901
UN24388        --> GTTAACGTCTTTTGGTGTGTTGATGTTGTGATTCTCACTTTAATTTGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720714       <-- GTTAACGTCTTTTGGTGTGTTGATGTTGTGATTCTCACTTTAATTTGTTT
EV547201       <-- GTTAACGTCTTTTGGTGTGTTGATGTTGTGATTCTCACTTTAATTTGTTT
FD985542       <-- GTTAACGTCTTTTGGTGTGTTGATGTTGTGATTCTCACTTTAATTTGTTT
FD936168       <-- GTTAACGTCTTTTGGTGTGTTGATGTTGTGATTCTCACTTTAATTTGTTT
EY917388       <-- GTTAACGTCTTTTGGTGTGTTGATGTTGTGATTCTCACTTTAATTTGTTT
FD555069       <-- GTTAACGTCTTTTGGTGTGTTGATGTTGTGATTCTCACTTTAATTTGTTT
EV552253       --> ..................................................
FD940238       --> ..................................................
EY921189       --> ..................................................
FD559347       --> ..................................................
EV567285       --> ..................................................
EW716612       --> ..................................................

               901    -    951
UN24388        --> CTCTCTTTTGTACCTCTGTTTTTCTCTGTTTTATTGTGCAAGATTTGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720714       <-- CTCTCTTTTGTACCTCTGTTTTTCTCTGTTTTGTTGTGCAAGATTTGATC
EV547201       <-- CTCTCTTTTGTACCTCTGTTTTTCTCTGTTTTATTGTGCAAGATTTGATC
FD985542       <-- CTCTCTTTTGTACCTCTGTTTTTCTCTGTTTTATTGTGCAAGATTTGATC
FD936168       <-- CTCTCTTTTGTACCTCTGTTTTTCTCTGTTTTGTTGTGCAAGATTTGATC
EY917388       <-- CTCTCTTTTGTACCTCTGTTTTTCTCTGTTTTATTGTGCAAGATctttta
FD555069       <-- CTCTCTTTTGTACCTCTGTTTTTCTCTGTTTTATTGTGCAAGATTTGATC
EV552253       --> ..................................................
FD940238       --> ..................................................
EY921189       --> ..................................................
FD559347       --> ..................................................
EV567285       --> ..................................................
EW716612       --> ..................................................

               951    -   1001
UN24388        --> TTTTACCAAATAACTTTTTTTTC...
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720714       <-- TTTTACCAAATAACTTTTTTTTCg..
EV547201       <-- TTTTACC...................
FD985542       <-- TTTTACC...................
FD936168       <-- TTTTACCAAATAACTTTTTTTTCatt
EY917388       <-- cc........................
FD555069       <-- TTTTACC...................
EV552253       --> ..........................
FD940238       --> ..........................
EY921189       --> ..........................
FD559347       --> ..........................
EV567285       --> ..........................
EW716612       --> ..........................