RadishBase

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Alignment for radish unigene UN25116

               1      -     51
UN25116        --> GGGAAACGTTTCTAAGAGTTTTACACGAGTTGTTGGTGAGACAGAAACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432986       <-- ..................................................
EV540350       <-- ..................................................
FD553074       <-- ..................................................
FD567002       <-- ..................................................
FD935192       <-- ..................................................
EY919888       <-- ..................................................
FD544999       <-- ..................................................
FD537841       <-- ..................................................
EY902842       <-- ..................................................
EY920086       <-- ..................................................
FD554652       <-- ..................................................
EV571188       <-- ..................................................
EY906758       --> GGGAAACGTTTCTAAGAGTTTTACACGAGTTGTTGGTGAGACAGAAACAG
FD938956       --> ..................................................
FD549366       --> ..................................................
FD556842       --> ..................................................
FD558837       --> ..................................................
EX888111       --> ..................................................
EV565958       --> ..................................................
EY905416       --> ..................................................

               51     -    101
UN25116        --> AGTTGATCAGTCTCCATATGAGGAACCACAACAACGCAAGACAAGTGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432986       <-- ..................................................
EV540350       <-- ..................................................
FD553074       <-- ..................................................
FD567002       <-- ..................................................
FD935192       <-- ..................................................
EY919888       <-- ..................................................
FD544999       <-- ..................................................
FD537841       <-- ..................................................
EY902842       <-- ..................................................
EY920086       <-- ..................................................
FD554652       <-- ..................................................
EV571188       <-- ..................................................
EY906758       --> AGTTGATCAGTCTCCATATGAGGAACCACAACAACGCAAGACAAGTGATT
FD938956       --> ..................gGAGGAACCACAACAACGCAAGACAAGTGATT
FD549366       --> ........................................gCAAGTGATC
FD556842       --> ..................................................
FD558837       --> ..................................................
EX888111       --> ..................................................
EV565958       --> ..................................................
EY905416       --> ..................................................

               101    -    151
UN25116        --> GGTGTGAAAGAGAGTGGTGAAACTCTTGTTCTAGCAACTTATGATGGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432986       <-- ..................................................
EV540350       <-- ..................................................
FD553074       <-- ..................................................
FD567002       <-- ..................................................
FD935192       <-- ..................................................
EY919888       <-- ..................................................
FD544999       <-- ..................................................
FD537841       <-- ..................................................
EY902842       <-- ..................................................
EY920086       <-- ..................................................
FD554652       <-- ..................................................
EV571188       <-- ..................................................
EY906758       --> GGTGTGAAAGAGAGTGGTGAAACTCTTGTTCTATCAACTTATGATGGGTG
FD938956       --> GGTGTGAAAGAGAGTGGTGAAACTCTTGTTCTAGCAACTTATGATGGGTG
FD549366       --> GGTGTGAAAGAGAGTGGTGAAACTCTTGTTCTAGCAACTTATGATGGGTG
FD556842       --> ..................................................
FD558837       --> ..................................................
EX888111       --> ..................................................
EV565958       --> ..................................................
EY905416       --> ..................................................

               151    -    201
UN25116        --> TGTCTGGTCTTTGCTTGAAGCAAAATGGTCACTTAAGCAAACAAGCAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432986       <-- .................AAGCAAAATGGTCACTTAAGCAAACAAGCAGTC
EV540350       <-- .............................CACTTAAGCAAACAAGCAGTC
FD553074       <-- ..................................................
FD567002       <-- ..................................................
FD935192       <-- ..................................................
EY919888       <-- ..................................................
FD544999       <-- ..................................................
FD537841       <-- ..................................................
EY902842       <-- ..................................................
EY920086       <-- ..................................................
FD554652       <-- ..................................................
EV571188       <-- ..................................................
EY906758       --> TGTCTGGTCTTTGCTTGAAGCAAAATGGTCACTTAAGCAAACAAGCAGTC
FD938956       --> TGTCTGGTCTTTGCTTGAAGCAAAATGGTCACTTAAGCAAACAAGCAGTC
FD549366       --> TGTCTGGTCTTTGCTTGACGCAAAATGGTCACTTAAGCAAACAAGCAGTC
FD556842       --> ..................AGCAAAATGGTCACTTAAGCAAACAAGCAGTC
FD558837       --> ..................................................
EX888111       --> ..................................................
EV565958       --> ..................................................
EY905416       --> ..................................................

               201    -    251
UN25116        --> TTGATGGTCCTGTCTTTGAGATTTTTGGTGTGAGAATGGTGAAAGTTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432986       <-- TTGATGGTCCTGTCTTTGAGATTTTTGGTGTGAGAATGGTGAAAGTTTAT
EV540350       <-- TTGATGGTCCTGTCTTTGAGATTTTTGGTGTGAGAATGGTGAAAGTTTAT
FD553074       <-- .................GAGATTTT-GGTGTGAGAATGGTGAAAGTTTAT
FD567002       <-- .....................TTTTTGGTGTGAGAATGGTGAAAGTTTAT
FD935192       <-- ..................................................
EY919888       <-- ..................................................
FD544999       <-- ..................................................
FD537841       <-- ..................................................
EY902842       <-- ..................................................
EY920086       <-- ..................................................
FD554652       <-- ..................................................
EV571188       <-- ..................................................
EY906758       --> TTGATGGTCCTGTCTTTGAGATTTTTGGTGTGAGAATGGTGAAAGTTTAT
FD938956       --> TTGATGGTCCTGTCTTTGAGATTTTTGGTGTGAGAATGGTGAAAGTTTAT
FD549366       --> TTGATGGTCCTGTCTTTGAGATTTTTGGTGTGAGAATGGTGAAAGTTTAT
FD556842       --> TTGATGGTCCTGTCTTTGAGATTTTTGGTGTGAGAATGGTGAAAGTTTAT
FD558837       --> ..................................................
EX888111       --> ..................................................
EV565958       --> ..................................................
EY905416       --> ..................................................

               251    -    301
UN25116        --> TATGGAAGGAAGCTGGAGTATGAGACAAAACGTTGCGCGAAGCTAAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432986       <-- TATGGAAGGAAGCTGGAGTATGAGACAAAACGTTGCGCGAAGCTAAGAAG  Raphanus sativus cv GSK3-1
EV540350       <-- TATGGAAGGAAGCTGGAGTATGAGACAAAACGTTGCGCAAAGCTAAGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD553074       <-- TATGGAAGGAAGCTGGAGTATGAGACAAAACGTTGCGCGAAGCTAAGAAG  Raphanus raphanistrum subsp. landra
FD567002       <-- TATGGAAGGAAGCTGGAGTATGAGACAAAACGTTGCGCGAAGCTAAGAAG  Raphanus sativus var. oleiformis
FD935192       <-- .............TGGAGTATGAGACAAAACGTTGCGCGAAGCTAAGAAG  Raphanus sativus var. oleiformis
EY919888       <-- .................GTATGATACAAAACGTTGCGCGAAGCTAAGAAG  Raphanus raphanistrum subsp. landra
FD544999       <-- ...................ATGAGACAAAACATTGCGCAAAGCTAAGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537841       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902842       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920086       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD554652       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV571188       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY906758       --> TATGGAAGGAAGCTGGAGTATGAGACAAAACGTTGCGCAAAGCTAAGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938956       --> TATGGAAGGAAGCTGGAGTATGAGACAAAACGTTGCGCGAAGCTAAGAAG  Raphanus sativus var. oleiformis
FD549366       --> TATGGAAGGAAGCTGGAGTATGAGACAAAACGTTGCGCAAAGCTAAGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556842       --> TATGGAAGGAAGCTGGAGTATGAGACAAAACGTTGCGCGAAGCTAAGAAG  Raphanus raphanistrum subsp. landra
FD558837       --> ..................................................  Raphanus raphanistrum subsp. landra
EX888111       --> ..................................................  Raphanus sativus var. oleiformis
EV565958       --> ..................................................  Raphanus raphanistrum subsp. landra
EY905416       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               301    -    351
UN25116        --> TGAGCAAGATTTCATGACAGCTGTCGAATTCTCAAAGCAGTATCCTTATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432986       <-- TGAGCAAGATTTCATGACAGCTGTCGAATTCTCAAAGCAGTATCCTTATG
EV540350       <-- TGAGCAAGATTTCATGACAGCTGTCGAATTCTCAAAGCAGTATCCTTATG
FD553074       <-- TGAGCAAGATTTCATGACAGCTGTCGAATTCTCAAAGCAGTATCCTTATG
FD567002       <-- TGAGCAAGATTTCATGACAGCTGTCGAATTCTCAAAGCAGTATCCTTATG
FD935192       <-- TGAGCAAGATTTCATGACAGCTGTCGAATTCTCAAAGCAGTATCCTTATG
EY919888       <-- TGAGCAAGATTTCATGACAGCTGTCGAATTCTCAAAGCAGTATCCTTATG
FD544999       <-- TGAGCAAGATTTCATGACAGCTGTCGAATTCTCAAAGCAGTATCCTTATG
FD537841       <-- .....AAGATTTCATGACAGCTGTCGAATTCTCAAAGCAGTATCCTTATG
EY902842       <-- ......................GTCGAATTCTCAAAGCAGTATCCTTATG
EY920086       <-- ..................................................
FD554652       <-- ..................................................
EV571188       <-- ..................................................
EY906758       --> TGAGCAAGATTTCATGACAGCTGTCGAATTCTCAAAGCAGTATCCTTATG
FD938956       --> TGAGCAAGATTTCATGACAGCTGTCGAATTCTCAAAGCAGTATCCTTATG
FD549366       --> TGAGCAAGATTTCATGACAGCTGTCGAATTCTCAAAGCAGTATCCTTATG
FD556842       --> TGAGCAAGATTTCATGACAGCTGTCGAATTCTCAAAGCAGTATCCTTATG
FD558837       --> ..................................................
EX888111       --> ..................................................
EV565958       --> ..................................................
EY905416       --> ..................................................

               351    -    401
UN25116        --> GTAAAGCTGTGGGGTTGCTAGACTTGAAGTTTGGTTCTTTTGAGGCTAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432986       <-- GTAAAGCTGTGGGGTTGCTAGACTTGAAGTTTGGTTCTTTTGAGGCTAAT
EV540350       <-- GTAAAGCTGTGGGGTTGCTAGACTTGAAGTTTGGTTCTTTTGAGGCTAAT
FD553074       <-- GTAAAGCTGTGGGGTTGCTAGACCTGAAGTTTGGT--TTTTGAGGCTAAT
FD567002       <-- GTAAAGCTGTGGGGTTGCTAGACTTGAAGTTTGGTTCTTTTGAGGCTAAT
FD935192       <-- GTAAAGCTGTGGGGTTGCTAGACTTGAAGTTTGGTTCTTTTGAGGCTAAT
EY919888       <-- GTAAAGCCGTGGGGTTGCTAGACTTGAAGTTTGGTTCTTTTGAGGCTAAT
FD544999       <-- GTAAAGCTGTGGGGTTGCTAGACTTGAAGTTTGGTTCTTTTGAGGCTAAT
FD537841       <-- GTAAAGCTGTGGGGTTGCTAGACTTGAAGTTTGGTTCTTTTGAGGCTAAT
EY902842       <-- GTAAAGCTGTGGGGTTGCTAGACTTGAAGTTTGGTTCTTTTGAGGCTAAT
EY920086       <-- ..................................................
FD554652       <-- ..................................................
EV571188       <-- ..................................................
EY906758       --> GTAAAGCTGTGGGGTTGCTAGACTTGAAGTTTGGTTCTTTTGAGGCTAAT
FD938956       --> GTAAAGCTGTGGGGTTGCTAGACTTGAAGTTTGGTTCTTTTGAGGCTAAT
FD549366       --> GTAAAGCTGTGGGGTTGCTAGACTTGAAGTTTGCTTCTTTTGAGGCTAAT
FD556842       --> GTAAAGCTGTGGGGTTGCTAGACCTGAAGTTTGGTT--TTTGAGGCTAAT
FD558837       --> ..................................................
EX888111       --> ..................................................
EV565958       --> ..................................................
EY905416       --> ..................................................

               401    -    451
UN25116        --> GAGAGATGGTTGGTTTTACCTGGATTAGTATCTGCTTTCATACTCAATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432986       <-- GAGAGATGGTTGGTTTTACCTGGATTAGTATCTGCTTTCATACTCAATGA  Raphanus sativus cv GSK3-1
EV540350       <-- GAGAAATGGTTGGTTTTGCCTGGATTAGTATCTGCTTTCATACTCAATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD553074       <-- GAGAGATGGTTGGTTTTACCTGGATTAGTATCTGCTTTCATACTCAATGA  Raphanus raphanistrum subsp. landra
FD567002       <-- GAGAGATGGTTGGTTTTACCTGGATTAGTATCTGCTTTCATACTCAATGA  Raphanus sativus var. oleiformis
FD935192       <-- GAGAGATGGTTGGTTTTACCTGGATTAGTATCTGCTTTCATACTCAATGA  Raphanus sativus var. oleiformis
EY919888       <-- GAGAGATGGTTGGTTTTACCTGGATTAGTATCTGCTTTCATACTCAATGA  Raphanus raphanistrum subsp. landra
FD544999       <-- GAGAAATGGTTGGTTTTGCCTGGATTAGTATCTGCTTTCATACTCAATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537841       <-- GAGAAATGGTTGGTTTTGCCTGGATTAGTATCTGCTTTCATACTCAATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902842       <-- GAGAAATGGTTGGTTTTGCCTGGATTAGTATCTGCTTTCATACTCAATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920086       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD554652       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV571188       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY906758       --> GAGAAATGGTTGGTTTTGCCTGGATTAGTATCTGCTTTCATACTCAATGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938956       --> GAGAGATGGTTGGTTTTACCTGGATTAGTATCTGCTTTCATACTCAATGA  Raphanus sativus var. oleiformis
FD549366       --> GAGAGATGGTTGGTTTTACCTGGATTAGTATCTGCTTTCATACTCAATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556842       --> GAGAGATGGTTGGTTTTACCTGGATTAGTATCTGCTTTCATACTCAATGA  Raphanus raphanistrum subsp. landra
FD558837       --> ..................................................  Raphanus raphanistrum subsp. landra
EX888111       --> ..................................................  Raphanus sativus var. oleiformis
EV565958       --> ..................................................  Raphanus raphanistrum subsp. landra
EY905416       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               451    -    501
UN25116        --> TCTTCTTAAGAAGGAAGGTTTTTGTGGAGCTGCAAAAGACATAGTGAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432986       <-- TCTTCTTAAGAATGAAGGTTTTTGTGGAGCTGCAAAAGACATAGTCAAAG  Raphanus sativus cv GSK3-1
EV540350       <-- TCTTCTTAAGAAGGAAGGTTTTTGTGGAGCTGCAAAAGACATAGTGAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD553074       <-- TCTTCTTAAGAAGGAAGGTTTTTGTGGAGCTGCAAAAGACATAGTGAAAG  Raphanus raphanistrum subsp. landra
FD567002       <-- TCTTCTTAAGAATGAAGGTTTTTGTGGAGCTGCAAAAGACATAGTCAAAG  Raphanus sativus var. oleiformis
FD935192       <-- TCTTCTTAAGAATGAAGGTTTTTGTGGAGCTGCAAAAGACATAGTCAAAG  Raphanus sativus var. oleiformis
EY919888       <-- TCTTCTTAAGAATGAAGGTTTTTGTGGAGCTGCAAAAGACATAGTCAAAG  Raphanus raphanistrum subsp. landra
FD544999       <-- TCTTCTTAAGACGGAAGGTTTTTGTGGAGCTGGAAAAGACATAGTGAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537841       <-- TCTTCTTAAGAAGGAAGGTTTTTGTGGAGCTGCAAAAGACATAGTGAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902842       <-- TCTTCTTAAGAAGGAAGGTTTTTGTGGAGCTGCAAAAGACATAGTGAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920086       <-- ..................TTTTTGTGGAGCTGCAAAAGACATAGTCAAAG  Raphanus raphanistrum subsp. landra
FD554652       <-- ..................TTTTTGTGGAGCTGCAAAAGACATAGTGAAAG  Raphanus raphanistrum subsp. landra
EV571188       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY906758       --> TCTTCTTAAGAAGGAAGGTTTTTGTGGAGCTGCAAAAGACATAGTGAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938956       --> TCTTCTTAAGAATGAAGGTTTTTGTGGAGCTGCAAAAGACATAGTCAAAG  Raphanus sativus var. oleiformis
FD549366       --> TCTTCTTAAGAAGGAAGGTTTTTGTGGAGCTGCAAAAGACATAGTCAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556842       --> TCTTCTTAAGAAGGAAGGTTTTTGTGGAGCTGCAAAAGACATAGTGAAAG  Raphanus raphanistrum subsp. landra
FD558837       --> ..................TTTTTGTGGAGCTGCAAAAGACATAGTGAAAG  Raphanus raphanistrum subsp. landra
EX888111       --> ..................................................  Raphanus sativus var. oleiformis
EV565958       --> ..................................................  Raphanus raphanistrum subsp. landra
EY905416       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               501    -    551
UN25116        --> GTAATGGGATAACTGTGAAGCTAGAAGAAGAAACAATGATGCATGTGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432986       <-- GTAATGGGATAACTGTGAAGCTAGAAGAAGAAACAATGATGCATGTGAAC
EV540350       <-- GTAATGGGATAACTGTGAAGCTAGAAGAAGAAACAATGATGCATGTGAAC
FD553074       <-- GTAATGGGATAACTGTGAAGCTAGAAGAAGAAACAATGATGCATGTGAAC
FD567002       <-- GTAATGGGATAACTGTGAAGCTAGAAGAAGAAACAATGATGCATGTGAAC
FD935192       <-- GTAATGGGATAACTGTGAAGCTAGAAGAAGAAACAATGATGCATGTGAAC
EY919888       <-- GTAATGGGATAACTGTGAAGCTAGAAGAAGAAACAATGATGCATGTGACC
FD544999       <-- GTAATGGGATAACTGTGAAGCTAGAAGAAGAGACAATGATGCATGTGAAC
FD537841       <-- GTAATGGGATAACCGTGAAGCTAGAAGAAGAAACAATGATGCATGTGAAC
EY902842       <-- GTAATGGGATAACTGTGAAGCTAGAAGAAGAAACAATGATGCATGTGAAC
EY920086       <-- GTAATGGGATAACTGTGAAGCTAGAAGAAGAAACAATGATGCATGTGACC
FD554652       <-- GTAATGGGATAACTGTGAAGCTAGAAGAAGAAACAATGATGCATGTGAAC
EV571188       <-- ..................................................
EY906758       --> GTAATGGGATAACTGTGAAGCTAGAAGAAGAAACAATGATGCATGTGAAC
FD938956       --> GTAATGGGATAACTGTGAAGCTAGAAGAAGAAACAATGATGCATGTGAAC
FD549366       --> GTAATGGGATAACAGTGAAGCTAGAAGAAGAAACAATGGTGCATGTGAAC
FD556842       --> GTAATGGGATAACTGTGAAGCTAGAAGAAGAAACAATGATGCATGTGAAC
FD558837       --> GTAATGGGATAACTGTGAAGCTAGAAGAAGAAACAATGATGCATGTGAAC
EX888111       --> ..................................................
EV565958       --> ..................................................
EY905416       --> ..................................................

               551    -    601
UN25116        --> ATCAATGGGGGTGCTAGGTGCTTGTCCAAGGAGCTTAACAGTGGGAACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432986       <-- ATCAATGGGGGTGCTAGGTGCTTGTCCAAGGAGCTTAACAGTGGGAACAT  Raphanus sativus cv GSK3-1
EV540350       <-- ATCAATGGCGGTGCTAGGTGCTTGTCCAAGGAGCTTAACAGTGGGAACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD553074       <-- ATCAATGGGGGTGCTAGGTGCTTGTCCAAGGAGCTTAACAGTGGGAACAT  Raphanus raphanistrum subsp. landra
FD567002       <-- ATCAATGGGGGTGCTAGGTGCTTGTCCAAGGAGCTTAACAGTGGGAACAT  Raphanus sativus var. oleiformis
FD935192       <-- ATCAATGGGGGTGCTAGGTGCTTGTCCAAGGAGCTTAACAGTGGGAACAT  Raphanus sativus var. oleiformis
EY919888       <-- ATCAATGGGGGTGCTAGGTGCTTGTCCAAGGAGCTTAACAGTGGGAACAT  Raphanus raphanistrum subsp. landra
FD544999       <-- ATCAATGGCGGTGCTAGGTGCTTGTCCAAGGAGCTTAACAGTGGGAACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537841       <-- ATCAATGGCGGTGCTAGGTGCTTGTCCAAGGAGCTTAACATTGGGAACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902842       <-- ATCAATGGCGGTGCTAGGTGCTTGTCCAAGGAGCTTAACAGTGGGAACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920086       <-- ATCAATGGGGGTGCTAGGTGCTTGTCCAAGGAGCTTAACAGTGGGAACAT  Raphanus raphanistrum subsp. landra
FD554652       <-- ATCAATGGGGGTGCTAGGTGCTTGTCCAAGGAGCTTAACAGTGGGAACAT  Raphanus raphanistrum subsp. landra
EV571188       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY906758       --> ATCAATGGCGGTGCTAGGTGCTTGTCCAAGGAGCTTAACAGTGGGAACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938956       --> ATCAATGGGGGTGCTAGGTGCTTGTCCAAGGAGCTTAACAGTGGGAACAT  Raphanus sativus var. oleiformis
FD549366       --> ATCAATGGCGGTGCTAGGTGCTTGTCCAAGGAGCTTAGCAGTGGGAACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556842       --> ATCAATGGGGGTGCTAGGTGCTTGTCCAAGGAGCTTAACAGTGGGAACAT  Raphanus raphanistrum subsp. landra
FD558837       --> ATCAATGGGGGTGCTAGGTGCTTGTCCAAGGAGCTTAACAGTGGGAACAT  Raphanus raphanistrum subsp. landra
EX888111       --> ..................................................  Raphanus sativus var. oleiformis
EV565958       --> ..................................................  Raphanus raphanistrum subsp. landra
EY905416       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               601    -    651
UN25116        --> GGTGGAAGAAGAAGGTGGTCATTGTGGTGGTTGTGGTGGATGTGGAGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432986       <-- GGTGGAAGAAGAAGGTGGTCATTGTGGTGGTTGTGGTGGATGTGGAGGAT
EV540350       <-- GGTGGAAGAAGAAGGTGGTCATTGTGGTGGTTGTGGTGGATGTGGAGGAT
FD553074       <-- GGTGGAAGAAGAAGGTGGTCATTGTGGTGGTTGTGGTGGATGTGGAGGAT
FD567002       <-- GGTGGAAGAAGAAGGTGGTCATTGTGGTGGTTGTGGTGGATGTGGAGGAT
FD935192       <-- GGCGGAAGAAGAAGGTGGTCATTGTGGTGGTTGTGGTGGATGTGGAGGAT
EY919888       <-- GGTGGAAGAAGAAGGTGGTCATTGTGGTGGTTGTGGTGGATGTGGAGGAT
FD544999       <-- GGTGGAAGAAGAAGGTGGTCATTGTGGTGGTTGTGGTGGATGTGGAGGAT
FD537841       <-- GGTGGAAGAAGAAGGTGGTCATTGTGGTGGTTGTGGTGGATGTGGAGGAT
EY902842       <-- GGTGGAAGAAGAAGGTGGTCATTGTGGTGGTTGTGGTGGATGTGGAGGAT
EY920086       <-- GGTGGAAGAAGAAGGTGGTCATTGTGGTGGTTGTGGTGGATGTGGAGGAT
FD554652       <-- GGTGGAAGAAGAAGGTGGTCATTGTGGTGGTTGTGGTGGATGTGGAGGAT
EV571188       <-- ..................................................
EY906758       --> GGTGGAAGAAGAAG-TGGTCATTGTGGTGGTTGTGG..............
FD938956       --> GGCGGAAGAAGAAGGTGGTCATTGTGGTGGTTGTGGTGGATGTGGAGGAT
FD549366       --> GGTGGAAGAAGAAGGTGGTCATTGTGGTGGTTGTGGTGGATGTGGAGGAT
FD556842       --> GGTGGAAGAAGAAGGTGGTCATTGTGGTGGTTGTGGTGGATGTGGAGGAT
FD558837       --> GGTGGAAGAAGAAGGTGGTCATTGTGGTGGTTGTGGTGGATGTGGAGGAT
EX888111       --> ...................gATTGTGGTGGTTGTGGTGGATGTGGAGGAT
EV565958       --> ..................................................
EY905416       --> ..................................................

               651    -    701
UN25116        --> GTGGCGGTGGCAGTGGGTGCGGAGGAGGTGGTGGAAGATGTGGTAATATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432986       <-- GTGGCGGTGGCAGTGGGTGCGGAGGAGGTGGTGGAAGATGTGGTAATATG
EV540350       <-- GTGGCGGTGGCAGTGGGTGCGGAGGAGGTGGTGGAAGATGTGGTAATATG
FD553074       <-- GTGGCGGTGGCAGTGGGTGCGGAGGAGGTGGTGGAAGATGTGGTAATATG
FD567002       <-- GTGGCGATGGCAGTGGGTGCGGAGGAGGTGGTGGAAGATGTGGTAATATG
FD935192       <-- GTGGCGGTGGCAGTGGGTGCGGAGGAGGTGGTGGAAGATGTGGTAATATG
EY919888       <-- GTGGCGGTGGCAGTGGGTGCGGAGGAGGTGGTGGAAGATGTGGTAATATG
FD544999       <-- GTGGCGGTGGCAGTGGGTGCGGAGGAGGTGGTGGAAGATGTGGTAATATG
FD537841       <-- GTGGCGGTGGCAGTGGGTGCGGAGGAGGTGGTGGAAGATGGGGTAATATG
EY902842       <-- GTGGCGGTGGCAGTGGGTGCGGAGGAGGTGGTGGAAGATGTGGTAATATG
EY920086       <-- GTGGCGGTGGCAGTGGGTGCGGAGGAGGTGGTGGAAGATGTGGTAATATG
FD554652       <-- GTGGCGGTGGCAGTGGGTGCTGAGGAGGTGGTGGAAGATGTGGTAATATG
EV571188       <-- .............gGGGTGCGGAGGAGGTGGTGGAAGATGTGGTAATATG
EY906758       --> ..................................................
FD938956       --> GTGGCGGTGGCAGTGGGTGCGGAGGAGGTGGTGGAAGATGTGGTAATATG
FD549366       --> GTGGCGGTGGCAGTGGGTGCGGAGGAGGTGGTGGAAGATGTGGTAATATG
FD556842       --> GTGGCGGTGGCAGTGGGTGCGGAGGAGGTGGTGGAAGATGTGGTAATATG
FD558837       --> GTGGCGGTGGCAGTGGGTGCTGAGGAGGTGGTGGAAGATGTGGTAATATG
EX888111       --> GTGGCGGTGGCAGTGGGTGCGGAGGAGGTGGTGGAAGATGTGGTAATATG
EV565958       --> .............gGGGTGCGGAGGAGGTGGTGGAAGATGTGGTAATATG
EY905416       --> ............................gGGTGGAAGATGTGGTAATATG

               701    -    751
UN25116        --> ATGACCAATGAAAATGTTACCACAGGTGGCGGCTCCTGCACTGGCGGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432986       <-- ATGACCAATGAAAATGTTACCACAGGTGGCGGCTCCTGCACTGGCGGTTC  Raphanus sativus cv GSK3-1
EV540350       <-- ATGACCAATGAAAATGTTAGCACAGGTGGCGGCTCCTGCACTGGCGGTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD553074       <-- ATGACCAATGAAAATGTTACCACAGGTGGCGGCTCCTGCACTGGCGGTTC  Raphanus raphanistrum subsp. landra
FD567002       <-- ATGACCAATGAAAATGTTACCACAGGTGGCGGCTCCTGCACTGGCGGTTC  Raphanus sativus var. oleiformis
FD935192       <-- ATGACCAATGAAAATGTTACCACAGGTGGCGGCTCCTGCACTGGCGGTTC  Raphanus sativus var. oleiformis
EY919888       <-- ATGACCAATGAAAATGTTACCACATGTGGCGGCTCCTGCACTGGCGGTTC  Raphanus raphanistrum subsp. landra
FD544999       <-- ATGACCAATGAAAATGTTAGCACAGGTGGCGGCTCCTGCACTGGCGGTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537841       <-- ATGACCAATGAAAATGTTAGCACAGGTGGCGGCTCCTGCACTGGCGGTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902842       <-- ATGACCAATGAAAATGTTAGCACAGGTGGCGGCTCCTGCACTGGCGGTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920086       <-- ATGACCAATGAAAATGTTACCACATGTGGCGGCTCCTGCACTGGCGGTTC  Raphanus raphanistrum subsp. landra
FD554652       <-- ATGACCAATGAAAATGTTACCACAGGTGGCGGCTCCTGCACTGGCGGTTC  Raphanus raphanistrum subsp. landra
EV571188       <-- ATGACCAATGAAAATGTTACCACAGGTGGCGGCTCCTGCACTGGCGGTTC  Raphanus raphanistrum subsp. landra
EY906758       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938956       --> ATGACCAATGAAAATGTTACCACAGGTG......................  Raphanus sativus var. oleiformis
FD549366       --> ATGACCAATGAAAATGTTACCACAGGTGGCGGCTCCTGCACTGGCGGTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556842       --> ATGACCAATGAAAATGTTACCACAGGTGGCGGCTCCTGCACTGGCGGTTC  Raphanus raphanistrum subsp. landra
FD558837       --> ATGACCAATGAAAATGTTACCACAGGTGGCGGCTCCTGCACTGGCGGTTC  Raphanus raphanistrum subsp. landra
EX888111       --> ATGACCAATGAAAATGTTACCACAGGTGGCGGCTCCTGCACTGGCGGTTC  Raphanus sativus var. oleiformis
EV565958       --> ATGACCAATGAAAATGTTACCACAGGTGGCGGCTCCTGCACTGGCGGTTC  Raphanus raphanistrum subsp. landra
EY905416       --> ATGACCAATGAAAATGTTAGCACAGGTGGCGGCTCCTGCACTGGCGGTTC  Raphanus raphanistrum subsp. raphanistrum (MS)

               751    -    801
UN25116        --> CACTGGATGCGGTGGGTGCGGTGGAGCCGGTGGAGGATGTGGTAATATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432986       <-- CACTGGATGCGGTGGGTGCGGTGGAGCCGGTGGAGGATGTGGTAATATGA
EV540350       <-- CACTGGATGCGGTGGGTGCGGTGGAGCCGGTGGAGGATGTGGTAATATGA
FD553074       <-- CACTGGATGCGGTGGGTGCGGTGGAGCCGGTGGAGGATGTGGTAATATGA
FD567002       <-- CACTGGATGCGGTGGGTGCGGTGGAGCCGGTGGAGGATGTGGTAATATGA
FD935192       <-- CACTGGATGCGGTGGGTGCGGTGGAGCCGGTGGAGGATGTGGTAATATGA
EY919888       <-- CACTGGATGCGGTGGGTGCGGTGGAGCCGGTGGAGGATGTGGTAATATGA
FD544999       <-- CACTGGATGCGGTGGGTGCGGTGGAGCCGGTGGAGGATGTGGTAATATGA
FD537841       <-- CACTGGATGCGGTGGGTGCGGTGGAGCCGGTGGAGGATGTGGTAATATGA
EY902842       <-- CACTGGATGCGGTGGGTGCGGTGGAGCCGGTGGAGGATGTGGTAATATGA
EY920086       <-- CACTGGATGCGGTGGGTGCGGTGGAGCCGGTGGAGGATGTGGTAATATGA
FD554652       <-- CACTGGATGCGGTGGGTGCGGTGGAGCCGGTGGAGGATGTGGTAATATGA
EV571188       <-- CACTGGATGCGGTGGGTGCGGTGGAGCCGGTGGAGGATGTGGTAATATGA
EY906758       --> ..................................................
FD938956       --> ..................................................
FD549366       --> CACTGGATGCGGTGGGTGCGGTGGAGCCGGTGGAGGATGTGGTAATATGA
FD556842       --> CACTGGATGCGGTGGGTGCGGTGG..........................
FD558837       --> CACTGGATGCGGTGGGTGCGGTGGAGCCGGTGGAGGATGTGGTAATATGA
EX888111       --> CACTGGATGCGGTGGGTGCGGTGGAGCCGGTGGAGGATGTGGTAATATGA
EV565958       --> CACTGGATGCGGTGGGTGCGGTGGAGCCGGTGGAGGATGTGGTAATATGA
EY905416       --> CACTGGATGCGGTGGGTGCGGTGGAGCCGGTGGAGGATGTGGTAATATGA

               801    -    851
UN25116        --> TGACCAATGAAAATGTTCCATCATTAGTAGCAGCAGCGGAAGCTCCCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432986       <-- TGACCAATGAAAATGTTCCATCATTAGTAGCAGCAGCGGAAGCTCCCATC  Raphanus sativus cv GSK3-1
EV540350       <-- CGACCAATGAAAAT-TTCCATCACTAGTAGCAGCAGCGGAAGCTCCCATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD553074       <-- TGACCAATGAAAATGTTCCATCATTAGTAGCAGCAGCGGAAGCTCCCATC  Raphanus raphanistrum subsp. landra
FD567002       <-- TGACCAATGAAAATGTTCCATCATTAGTAGCAGCAGCGGAAGCTCCCATC  Raphanus sativus var. oleiformis
FD935192       <-- TGACCAATGAAAATGTTCCATCATTAGTAGCAGCAGCGGAAGCTCCCATC  Raphanus sativus var. oleiformis
EY919888       <-- TGACCAATGAAAATGTTCCATCATTAGTAGCAGCAGCGGAAGCTCCCATC  Raphanus raphanistrum subsp. landra
FD544999       <-- TGACCAATGAAAATGTTCCATCACTAGTAGCAGCAGCGGAAGCTCCCATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537841       <-- TGACCAATGAAAATGTTCCATCACTAGTAGCAGCAGCGGAAGCTCCCATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902842       <-- TGACCAATGAAAATGTTCCATCACTAGTAGCAGCAGCGGAAGCTCCCATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920086       <-- TGACCAATGAAAATGTTCCATCATTAGTAGCAGCAGCGGAAGCTCCCATC  Raphanus raphanistrum subsp. landra
FD554652       <-- TGACCAATGAAAATGTTCCATCATTAGTAGCAGCAGCGGAAGCTCCCATC  Raphanus raphanistrum subsp. landra
EV571188       <-- TGACCAATGAAAATGTTCCATCATTAGTAGCAGCAGCGGAAGCTCC....  Raphanus raphanistrum subsp. landra
EY906758       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938956       --> ..................................................  Raphanus sativus var. oleiformis
FD549366       --> TGAC-AATGAAA-TGTTCCATCATTAGAAGCAGCAGCGGA-GCTCCCATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556842       --> ..................................................  Raphanus raphanistrum subsp. landra
FD558837       --> TGACCAATGAAAATGTTCCATCATTAGTAGCAGCAGCGGAAGCTCCCATC  Raphanus raphanistrum subsp. landra
EX888111       --> TGACCAATGAAAATGTTCCATCATTAGTAGCAGCAGCGGAAGCTCCCATC  Raphanus sativus var. oleiformis
EV565958       --> TGACCAATGAAAATGTTCCATCATTAGTAGCAGCAGCGGAAGCTCCCATC  Raphanus raphanistrum subsp. landra
EY905416       --> TGACCAATGAAAATGTTCCATCACTAGTAGCAGCAGCGGAAGCTCCCATC  Raphanus raphanistrum subsp. raphanistrum (MS)

               851    -    901
UN25116        --> GACGCAGTTGCAGCTTGATTATTATTTAAAGAAAGAAAAACGATATTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432986       <-- GACGCAGTTGCAGCTTGATTATTATTTAAAGAAAGAAAAACGATATTAAG  Raphanus sativus cv GSK3-1
EV540350       <-- GACGCAGTTGCAGCTTGATTATTATTTAAAGAAAGAAAAGCGATATTAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD553074       <-- GACGCAGTTGCAGCTTGATTATTATTTAAAGACAGAAAAACGATATTAAG  Raphanus raphanistrum subsp. landra
FD567002       <-- GACGCAGTTGCAGCTTGATTATTATTTAAAGAAAGAAAAACGATATTAAG  Raphanus sativus var. oleiformis
FD935192       <-- GACGCAGTTGCAGCTTGATTATTATTTAAAGAAAGAAAAACGATATTAAG  Raphanus sativus var. oleiformis
EY919888       <-- GACGCAGTTGCAGCTTGATTATTATTTAAAGAAAGAAAAACGATATTAAG  Raphanus raphanistrum subsp. landra
FD544999       <-- GACGCAGTTGCAGCTTGATTATTATTTAAAGAAAGAAAAGCGATATTAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537841       <-- GACGCAGTTGCAGCTTGATTATTATTTAAAGAAAGAAAAGCGATATTAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902842       <-- GACGCAGTTGCAGCTTGATTATTATTTAAAGAAAGAAAAGCGATATTAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920086       <-- GACGCAGTTGCAGCTTGATTATTATTTAAAGAAAGAAAAACGATATTAAG  Raphanus raphanistrum subsp. landra
FD554652       <-- GACGCAGTTGCAGCTTGATTATTATTTAAAGAAAGAAAAACGATATTAAG  Raphanus raphanistrum subsp. landra
EV571188       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY906758       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938956       --> ..................................................  Raphanus sativus var. oleiformis
FD549366       --> GACGCAGTTGCAGCTTG.................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556842       --> ..................................................  Raphanus raphanistrum subsp. landra
FD558837       --> GACGCAGTTGCAGCTTGATTATTATTTAAAGAAAGAAAAACGATATTAAG  Raphanus raphanistrum subsp. landra
EX888111       --> GACGCAGTTGCAGCTTGATTATTATTTAAAGAAAGAAAAACGATATTAAG  Raphanus sativus var. oleiformis
EV565958       --> GACGCAGTTGCAGCTTGATTATTATTTAAAGAAAGAAAAACGATATTAAG  Raphanus raphanistrum subsp. landra
EY905416       --> GACGCAGTTGCAGCTTGATTATTATTTAAAGAAAGAAAAGCGATATTAAG  Raphanus raphanistrum subsp. raphanistrum (MS)

               901    -    951
UN25116        --> TTTTATCTATGTGATGTTAACAAATGGACTAACAGTATA--ATAAAACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432986       <-- TTTTATCTATGTGATGTTAACAAATGGACTAACAGTATA--ATAAAACTA  Raphanus sativus cv GSK3-1
EV540350       <-- TTTTATCTATGTGATGTTAACAAATGGACTAACAGTATATAATAAAACTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD553074       <-- TTTTATCTATGTGATGTTAACAAATGGACTAACAGTATA--ATAAAACTA  Raphanus raphanistrum subsp. landra
FD567002       <-- TTTTATCTATGTGATGTTAACAAATGGACTAACAGTATA--ATAAAACTA  Raphanus sativus var. oleiformis
FD935192       <-- TTTTATCTATGTGATGTTAACAAATGGACTAACAGTATA--ATAAAACTA  Raphanus sativus var. oleiformis
EY919888       <-- TTTTATCTATGTGATGTTAACAAATGGACTAACAGTATA--ATAAAACTA  Raphanus raphanistrum subsp. landra
FD544999       <-- TTTTATCTATGTGATGTTAACAAATGGACTAACAGTATATAATAAAACTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537841       <-- TTTTATCTATGTGATGTTAACAAATGGACTAACAGTATATAATAAAACTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902842       <-- TTTTATCTATGTGATGTTAACAAATGGACTAACAGTATATAATAAAACTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920086       <-- TTTTATCTATGTGATGTTAACAAATGGACTAACAGTATA--ATAAAACTA  Raphanus raphanistrum subsp. landra
FD554652       <-- TTTTATCTATGTGATGTTAACAAATGGACTAACAGTATA--ATAAAACTA  Raphanus raphanistrum subsp. landra
EV571188       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY906758       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938956       --> ..................................................  Raphanus sativus var. oleiformis
FD549366       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556842       --> ..................................................  Raphanus raphanistrum subsp. landra
FD558837       --> TTTTATCTATGTGATGTTAACAAATGGACTAACAGTATA--ATAAAACTA  Raphanus raphanistrum subsp. landra
EX888111       --> TTTTATCTATGTGATGTTAACAAATGGACTAACAGTATA--ATAAAACTA  Raphanus sativus var. oleiformis
EV565958       --> TTTTATCTATGTGATGTTAACAAATGGACTAACAGCATA--ATGAAACTA  Raphanus raphanistrum subsp. landra
EY905416       --> TTTTATCTATGTGATGTTAACAAATGGACTAACAGTATATAATAAAACTA  Raphanus raphanistrum subsp. raphanistrum (MS)

               951    -   1001
UN25116        --> ATGAGATGTGTTGTTATGTGTTTTCTTTTCTTTTAAACATTTGTAAGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432986       <-- ATGAGATGTGTTGTTATGTGTTTTCTTTTCTTTTAAACATTTGTAAGCTG
EV540350       <-- ATGAGATGTGTTGTTATGTGTTTTCTTTTCTTTTAAACATTTGTAAGCTG
FD553074       <-- ATGAGATGTGTTGTTATGTGTTTTCTTTTCTTTTAAACATTTTTAAGCTG
FD567002       <-- ATGAGATGTGTTGTTATGTGTTTTCTTTTCTTTTAAACATTTGTAAGCCG
FD935192       <-- ATGAGATGTGTTGTTATGTGTTTTCTTTTCTTTTAAACATTTGTAAGCTG
EY919888       <-- ATGAGATGTGTTGTTATGTGTTTTCTTTTCTTTTAAACATTTGTAAGCTG
FD544999       <-- ATGAGATGTGTTGTTATGTGTTTTCTTTTCTTTTAAACATTTGTAAGCTG
FD537841       <-- ATGAGATGTGTTGTTATGTGTTTTCTCTTCTTTTAAACATTTGTAAGCTG
EY902842       <-- ATGAGATGTGTTGTTATGTGTTTTCTTTTCTTTTAAACATTTGTAAGCTG
EY920086       <-- ATGAGATGTGTTGTTATGTGTTTTCTTTTCTTTTAAACATTTGTAAGCTG
FD554652       <-- ATGAGATGTGTTGTTATGTGTTTTCTTTTCTTTTAAACATTTGTAAGCTG
EV571188       <-- ..................................................
EY906758       --> ..................................................
FD938956       --> ..................................................
FD549366       --> ..................................................
FD556842       --> ..................................................
FD558837       --> ATGAGATGTGTTGTTATGTGTTTTCTTTTCTTTTAAACATTTGTAAGCTG
EX888111       --> ATGAGATGTGTTGTTATGTGTTTTCTTTTCTTTTAAACATTTGTAAGCTG
EV565958       --> TTGAGATGTGTTGTTATGTGTTTTCTTTTCTTTTAAACATTTGTAAGCTG
EY905416       --> ATGAGATGTGTTGTTATGTGTTTTCTTTTCTTTTAAACATTTGTAAGCTG

               1001   -   1051
UN25116        --> TAATAAAATATATAT--TTAAACGTTTTCTAACAATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432986       <-- TAATAAAATATATAgtaaac..................  Raphanus sativus cv GSK3-1
EV540350       <-- TAATAAAATATATATAGTTAAACGTTTTCTAAC.....  Raphanus raphanistrum subsp. raphanistrum (MS)
FD553074       <-- TAATAAAATATATAG--TTAAACGTTTTCTAACAATGC  Raphanus raphanistrum subsp. landra
FD567002       <-- TAATAAAATATATAT--TTAAACGTTTTCT........  Raphanus sativus var. oleiformis
FD935192       <-- TAATAAAATATATAT--TTAAACGTTTTCTAACAATGC  Raphanus sativus var. oleiformis
EY919888       <-- TAATAAAATATATAG--TTAAACG..............  Raphanus raphanistrum subsp. landra
FD544999       <-- TAATAAAATATATATAGTTAAACGTTTTCTGACAATGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537841       <-- TAATAAAATATATATAGTTAAACGTTTTCg........  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902842       <-- TAATAAAATATATATAGTTAAACGTTTTCTAACAATGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920086       <-- TAATAAAATATATAG--TTAAACG..............  Raphanus raphanistrum subsp. landra
FD554652       <-- TAATAAAATATATAG--TTAAACGTTTTCTAACAATGC  Raphanus raphanistrum subsp. landra
EV571188       <-- ......................................  Raphanus raphanistrum subsp. landra
EY906758       --> ......................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938956       --> ......................................  Raphanus sativus var. oleiformis
FD549366       --> ......................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556842       --> ......................................  Raphanus raphanistrum subsp. landra
FD558837       --> TAATAAAATATATAG--TTAAACGTTTTCTAACAATGC  Raphanus raphanistrum subsp. landra
EX888111       --> TAATAAAATATAT----TTAAACGTTT...........  Raphanus sativus var. oleiformis
EV565958       --> TAATAAAATATATAG--TTAAACGTTTTCTAAC.....  Raphanus raphanistrum subsp. landra
EY905416       --> TAATAAAATATATATAGTTAAACGTTTTCT........  Raphanus raphanistrum subsp. raphanistrum (MS)