-5     -     45
UN25202        --> ......ATCTAAAAACTTCAAAGCCTCTGCTTCATCCAACTATGGCAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572000       <-- ggaactATCTAAAA-CTTCAAAGCCTCTGCTTCATCCAACTATGGCAACT  Raphanus raphanistrum subsp. landra
EV574647       <-- ...gggATCTAAAA-CTTCAAAGCCTCTGCTTCATCCAACTATGGCAACT  Raphanus raphanistrum subsp. landra
FD530911       <-- ....ggATCTAAAAACTTCAAAGCCTCTGCT-CATCCAACTATGGCAACT  Raphanus raphanistrum subsp. maritimus
FD958727       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD983372       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX892879       <-- ..................................................  Raphanus sativus var. oleiformis
EV565499       --> ....ggATCTAAAA-CTTCAAAGCCTCTGCTTCATCCAACTATGGCAACT  Raphanus raphanistrum subsp. landra
EV566987       --> ggaactATCTAAAA-CTTCAAAGCCTCTGCTTCATCCAACTATGGCAACT  Raphanus raphanistrum subsp. landra
EV570326       --> ...gggATCTAAAA-CTTCAAAGCCTCTGCTTCATCCAACTATGGCAACT  Raphanus raphanistrum subsp. landra
EX889073       --> ....ggATCTAAAAACTTCAAAGCCTCTGCTTCATCCAACTATGGCAACT  Raphanus sativus var. oleiformis
FD535199       --> ....ggATCTAAAAACTTCAAAGCCTCTGCT-CATCCAACTATGGCAACT  Raphanus raphanistrum subsp. maritimus
FD536202       --> ....ggATCTAAAAACTTCAAAGCCTCTGCTTCATCCAACTATGGCAACT  Raphanus raphanistrum subsp. maritimus
FD962112       --> ....ggATCTAAAAACTTCAAAGCCTCTGCTTCATCCAACTATGGCAACT  Raphanus raphanistrum subsp. maritimus
FD964243       --> ....ggATCTAAAAACTTCAAAGCCTCTGCTTCATCCAACTATGGCAACT  Raphanus raphanistrum subsp. maritimus
FD987297       --> ....ggATCTAAAA-CTTCAAAGCCTCTGCTTCATCCAACTATGGCAACT  Raphanus raphanistrum subsp. landra

               45     -     95
UN25202        --> ATAGCTTCTACTAGTCTTAACTTTGGAACTCAACGAGCCGTTATCACCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572000       <-- ATAGCTTCTACTAGTCTTAACTTTGGAACTCAACGAGCCGTTATCACCAG
EV574647       <-- ATAGCTTCTACTAGTCTTAACTTTGGAACTCAACGAGCCGTTATCACCAG
FD530911       <-- ATAGCTTCTACTAGTCTTAACTTTGGAACTCAACGAGCCGTTATCACCAG
FD958727       <-- ..............TCTTAACTTTGGAACTCAACGAGCCATTATCACCAG
FD983372       <-- ..................................................
EX892879       <-- ..................................................
EV565499       --> ATAGCTTCTACTAGTCTTAACTTTGGAACTCAACGAGCCGTTATCACCAG
EV566987       --> ATAGCTTCTACTAGTCTTAACTTTGGAACTCAACGAGCCGTTATCACCAG
EV570326       --> ATAGCTTCTACTAGTCTTAACTTTGGAACTCAACGAGCCGTTATCACCAG
EX889073       --> ATAGCTTCTACTAGTCTTAACTTTGGAACTCAACGAGCCGTTATCACCAG
FD535199       --> ATAGCTTCTACTAGTCTTAACTTTGGAACTCAACGAGCCGTTATCACCAG
FD536202       --> ATAGCTTCTACTAGTCTTAACTTTGGAACTCAACGAGCCGTTATCACCAG
FD962112       --> ATAGCTTCTACTAGTCTTAACTTTGGAACTCAACGAGCCATTATCACCAG
FD964243       --> ATAGCTTCTACTAGTCTTAACTTTGGAACTCAACGAGCCGTTATCACCAG
FD987297       --> ATAGCTTCTACTAGTCTTAACTTTGGAACTCAACGAGCCGTTATCACCAG

               95     -    145
UN25202        --> CGAGGCTCGTCCAGTTCGTCTCACAGGTCCGGTCCGTTTGAACAATCCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572000       <-- CGAGGCTCGTCCAGTTCGTCTCACAGGTCCGGTCCGTTTGAACAATCCGT
EV574647       <-- CGAGGCTCGTCCAGTTCGTCTCACAGGTCCGGTCCGTTTGAACAATCCGT
FD530911       <-- CGAGGCTCGTCCAGTTCGTCTCACAGGTCCGGTCCGTTTGAACAATCCGT
FD958727       <-- TGAGGCTCATCCAGTTCGTCTCACAGGTCCGGTCCGTTTGAACAATCCGT
FD983372       <-- ....................TCACAGGTCCGGTCCGTTTGAACAATCCGT
EX892879       <-- ...........................TCCGGTCCGTTTGAACAATCCGT
EV565499       --> CGAGGCTCGTCCAGTTCGTCTCACAGGTCCGGTCCGTTTGAACAATCCGT
EV566987       --> CGAGGCTCGTCCAGTTCGTCTCACAGGTCCGGTCCGTTTGAACAATCCGT
EV570326       --> CGAGGCTCGTCCAGTTCGTCTCACAGGTCCGGTCCGTTTGAACAATCCGT
EX889073       --> CGAGGCTCGTCCAGTTCGTCTCGCAGGTCCGGTCCGTTTGAACAATCCGT
FD535199       --> CGAGGCTCGTCCAGTTCGTCTCACAGGTCCGGTCCGTTTGAACAATCCGT
FD536202       --> CGAGGCTCGTCCAGTTCGTCTCACAGGTCCGGTCCGTTTGAACAATCCGT
FD962112       --> TGAGGCTCATCCAGTTCGTCTCACAGGTCCGGTCCGTTTGAACAATCCGT
FD964243       --> CGAGGCTCGTCCAGTTCGTCTCACAGGTCCGGTCCGTTTGAACAATCCGT
FD987297       --> CGAGGCTCGTCCAGTTCGTCTCACAGGTCCGGTCCGTTTGAACAATCCGT

               145    -    195
UN25202        --> GGAGTCTTGGTTCAAGAACAACGAACCGGATGGTGAACTTTAGGCCAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572000       <-- GGAGTCTTGGTTCAAGAACAACGAACCGGATGGTGAAGTTTAGGCCAGTA  Raphanus raphanistrum subsp. landra
EV574647       <-- GGAGTCTTGGTTCAAGAACAACGAACCGGATGGTGAAGTTTAGGCCAGTA  Raphanus raphanistrum subsp. landra
FD530911       <-- GGAGTCTTGGTTCAAGAACAACGAACCGGATGGTGAACTTTAGGCCAGTA  Raphanus raphanistrum subsp. maritimus
FD958727       <-- GGAGTCTTGGTTCAAGAACAACGAACCGGATGGTGAACTTTAGGCCAGTA  Raphanus raphanistrum subsp. maritimus
FD983372       <-- GGAGTCTTGGTTCAAGAACAACGAACCGGATGGTGAAGTTTATGCCAGTA  Raphanus raphanistrum subsp. landra
EX892879       <-- GGAGTCTTGGTTCAAGAACAACGAACCGGATGGTGAACTTTAGGCCAGTA  Raphanus sativus var. oleiformis
EV565499       --> GGAGTCTTGGTTCAAGAACAACGAACCGGATGGTGAAGTTTAGGCCAGTA  Raphanus raphanistrum subsp. landra
EV566987       --> GGAGTCTTGGTTCAAGAACAACGAACCGGATGGTGAAGTTTAGGCCAGTA  Raphanus raphanistrum subsp. landra
EV570326       --> GGAGTCTTGGTTCAAGAACAACGAACCGGATGGTGAAGTTTAGGCCAGTA  Raphanus raphanistrum subsp. landra
EX889073       --> GGAGTCTTGGTTCAAGAACAACGAACCGGATGGTGAACTTTAGGCCAGTA  Raphanus sativus var. oleiformis
FD535199       --> GGAGTCTTGGTTCAAGAACAACGAACCGGATGGTGAACTTTAGGCCAGTA  Raphanus raphanistrum subsp. maritimus
FD536202       --> GGAGTCTTGGTTCAAGAACAACGAACCGGATGGTGAACTTTAGGCCAGTA  Raphanus raphanistrum subsp. maritimus
FD962112       --> GGAGTCTTGGTTCAAGAACAACGAACCGGATGGTGAACTTTAGGCCAGTA  Raphanus raphanistrum subsp. maritimus
FD964243       --> GGAGTCTTGGTTCAAGAACAACGAACCGGATGGTGAACTTTAGGCCAGTA  Raphanus raphanistrum subsp. maritimus
FD987297       --> GGAGTCTTGGTTCAAGAACAACGAACCGGATGGTGAAGTTTATGCCAGTA  Raphanus raphanistrum subsp. landra

               195    -    245
UN25202        --> AAAGCAACGCCAGAAGGAGTGATATCGGATAAAGTGGAGAAGAGCATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572000       <-- AAAGCAACGCCAGAAGGAGTGATATCGGATAAAGTGGAGAAGAGCATCAA
EV574647       <-- AAAGCAACGCCAGAAGGAGTGATATCGGATAAAGTGGAGAAGAGCATCAA
FD530911       <-- AAAGCAACGCCAGAAGGAGTGATATCGGATAAAGTGGAGAAGAGCATCAA
FD958727       <-- AAAGCAACGCCAGAAGGAGTGATATCGGATAAAGTGGAGAAGAGCATCAA
FD983372       <-- AAAGCAACGCCGGAAGGAGTGATATCGGATAAAGTGGAGAAGAGCATCAA
EX892879       <-- AAAGCAACGCCAGAAGGAGTGATATCGGATAAAGTGGAGAAGAGCATCAA
EV565499       --> AAAGCAACGCCAGAAGGAGTGATATCGGATAAAGTGGAGAAGAGCATCAA
EV566987       --> AAAGCAACGCCAGAAGGAGTGATATCGGATAAAGTGGAGAAGAGCATCAA
EV570326       --> AAAGCAACGCCAGAAGGAGTGATATCGGATAAAGTGGAGAAGAGCATCAA
EX889073       --> AAAGCAACGCCAGAAGGAGTGATATCGGATAAAGTGGAGAAGAGCATCAA
FD535199       --> AAAGCAACGCCAGAAGGAGTGATATCGGATAAAGTGGAGAAGAGCATCAA
FD536202       --> AAAGCAACGCCAGAAGGAGTGATATCGGATAAAGTGGAGAAGAGCATCAA
FD962112       --> AAAGCAACGCCAGAAGGAGTGATATCGGATAAAGTGGAGAAGAGCATCAA
FD964243       --> AAAGCAACGCCGGAAGGAGTGATATCGGATAAAGTGGAGAAGAGCATCAA
FD987297       --> AAAGCAACGCCGGAAGGAGTGATATCGGATAAAGTGGAGAAGAGCATCAA

               245    -    295
UN25202        --> GGACGCCGAGGAGGCTTGTGCTGGCGACCCTGCGAGCGGAGAGTGTGTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572000       <-- GGACGCCGAGGAGGCTTGTGCTGGCGACCCTGTGAGCGGAGAGTGTGTAG  Raphanus raphanistrum subsp. landra
EV574647       <-- GGACGCCGAGGAGGCTTGTGCTGGCGACCCTGTGAGCGGAGAGTGTGTAG  Raphanus raphanistrum subsp. landra
FD530911       <-- GGACGCCGAGGAGGCTTGTGCTGGCGACCCTGCGAGCGGAGAGTGTGTAG  Raphanus raphanistrum subsp. maritimus
FD958727       <-- GGACGCCGAGGAGGCTTGTGCTGGCGACCCTGCGAGCGGAGAGTGTGTAG  Raphanus raphanistrum subsp. maritimus
FD983372       <-- GGACGCCGAGGAGGCTTGTGCTGGCGACCCTGTGAGCGGAGAGTGTGTAG  Raphanus raphanistrum subsp. landra
EX892879       <-- GGACGCCGAGGAGGCTTGTGCTGGCGACCCTGCGAGCGGAGAGTGTGTAG  Raphanus sativus var. oleiformis
EV565499       --> GGGCGCCGAGGAGGCTTGTGCTGGCGACCCTGTGAGCGGAGAGTGTGTAG  Raphanus raphanistrum subsp. landra
EV566987       --> GGACGCCGAGGAGGCTTGTGCTGGCGACCCTGTGAGCGGAGAGTGTGTAG  Raphanus raphanistrum subsp. landra
EV570326       --> GGACGCCGAGGAGGCTTGTGCTGGCGACCCTGTGAGCGGAGAGTGTGTAG  Raphanus raphanistrum subsp. landra
EX889073       --> GGACGCCGAGGAGGCTTGTGCTGGCGACCCTGCGAGCGGAGAGTGTGTAG  Raphanus sativus var. oleiformis
FD535199       --> GGACGCCGAGGAGGCTTGTGCTGGCGACCCTGCGAGCGGAGAGTGTGTAG  Raphanus raphanistrum subsp. maritimus
FD536202       --> GGACGCCGAGGAGGCTTGTGCTGGCGACCCTGCGAGCGGAGAGTGTGTAG  Raphanus raphanistrum subsp. maritimus
FD962112       --> GGACGCCGAGGAGGCTTGTGCTGGCGACCCTGCGAGCGGAGAGTGTGTAG  Raphanus raphanistrum subsp. maritimus
FD964243       --> GGACGCCGAGGAGGCTTGTGCTGGCGACCCTGCGAGCGGAGAGTGTGTAG  Raphanus raphanistrum subsp. maritimus
FD987297       --> GGACGCCGAGGAGGCTTGTGCTGGCGACCCTGTGAGCGGAGAGTGTGTAG  Raphanus raphanistrum subsp. landra

               295    -    345
UN25202        --> CTGCGTGGGACGAGGTCGAAGAGCTTAGCGCAGCAGCTAGCCACGCTAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572000       <-- CTGCGTGGGACGAGGTCGAAGAGCTTAGCGCAGCAGCTAGCCACGCTAGA
EV574647       <-- CTGCGTGGGACGAGGTCGAAGAGCCTAGCGCAGCAGCTAGCCACGCTAGA
FD530911       <-- CTGCGTGGGACGAGGTCGAAGAGCTTAGCGCAGCAGCTAGCCACGCTAGA
FD958727       <-- CTGCGTGGGACGAGGTCGAAGAGCTTAGCGCAGCAGCTAGCCACGCTAGA
FD983372       <-- CTGCGTGGGACGAGGTCGAAGAGCTTAGCGCAGCAGCTAGCCACGCTAGA
EX892879       <-- CTGCGTGGTACGAGGTCGAAGAGCTTAGCGCAGCAGCTAGCCACGCTAGA
EV565499       --> CTGCGTGGGACGAGGTCGAAGAGCTTAGCGCAGCAGCTAGCCACGCTAGA
EV566987       --> CTGCGTGGGACGAGGTCGAAGAGCTTAGCGCAGCAGCTAGCCACGCTAGA
EV570326       --> CTGCGTGGGACGAGGTCGAAGAGCCTAGCGCAGCAGCTAGCCACGCTAGA
EX889073       --> CTGCGTGGTACGAGGTCGAAGAGCTTAGCGCAGCAGCTAGCCACGCTAGA
FD535199       --> CTGCGTGGGACGAGGTCGAAGAGCTTAGCGCAGCAGCTAGCCACGCTAGA
FD536202       --> CTGCGTGGGACGAGGTCGAAGAGCTTAGCGCAGCAGCTAGCCACGCTAGA
FD962112       --> CTGCGTGGGACGAGGTCGAAGAGCTTAGCGCAGCAGCTAGCCACGCTAGA
FD964243       --> CTGCGTGGGACGAGGTCGA...............................
FD987297       --> CTGCGTGGGACGAGGTCGAAGAGCTTAGCGCAGCAGCTAGCCACGCTAGA

               345    -    395
UN25202        --> GACAAGAAGAAAGACTCCGACCCTTTGGAGGAGTACTGCAAAGACAATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572000       <-- GACAAGAAGAAAGACTCCGACCCTTTGGAGGAGTACTGCAAAGACAATCC
EV574647       <-- GACAAGAAGAAAGACTCCGACCCTTTGGAGGAGTACTGCAAAGACAATCC
FD530911       <-- GACAAGAAGAAAGACTCCGACCCTTTGGAGGAGTACTGCAAAGACAATCC
FD958727       <-- GACAAGAAGAAAGACTCCGACCCTTTGGAGGAGTACTGCAAAGACAATCC
FD983372       <-- GACAAGAAGAAAGACTCCGACCCTTTGGAGGAGTACTGCAAAGACAATCC
EX892879       <-- GACAAGAAGAAAGATTCCGACCCTTTGGAGGAGTACTGCAAAGACAATCC
EV565499       --> GACAAGAAGAAAGACTCCGACCCTTTGGAGGAGTACTGCAAAGACAATCC
EV566987       --> GACAAGAAGAAAGACTCCGACCCTTTGGAGGAGTACTGCAAAGACAATCC
EV570326       --> GACAAGAAGAAAGACTCCGACCCTTTGGAGGAGTACTGCAAAGACAATCC
EX889073       --> GACAAGAAGAAAGACTCCGACCCTTTGGAGGAGTACTGCAAAGACAATCC
FD535199       --> GACAAGAAGAAAGACTCCGACCCTTTGGAGGAGTACTGCAAAGACAATCC
FD536202       --> GACAAGAAGAAAGACTCCGACCCTTTGGAGGAGTACTGCAAAGACAATCC
FD962112       --> GACAAGAAGAAAGACTCCGACCCTTTGGAGGAGTACTGCAAAGACAATCC
FD964243       --> ..................................................
FD987297       --> GACAAGAAGAAAGACTCCGACCCTTTGGAGGAGTACTGCAAAGACAATCC

               395    -    445
UN25202        --> CGAGACTAACGAGTGTCGTACTTACGACAACTGAAACTGAGCTCCATCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572000       <-- CGAGACTAACGAGTGTCGTACTTACGACAACTGAAACTGAGCTCCATCAT  Raphanus raphanistrum subsp. landra
EV574647       <-- CGAGACTAACGAGTGTCGTACTTACGACAACTGAAACTGAGCTCCATCAT  Raphanus raphanistrum subsp. landra
FD530911       <-- CGAGACTAACGAGTGCCGTACTTACGACAACTGAAACTGATCTCCATCAT  Raphanus raphanistrum subsp. maritimus
FD958727       <-- CGAGACTAACGAGTGTCGTACTTACGACAACTGAAACTGATCTCCATCAT  Raphanus raphanistrum subsp. maritimus
FD983372       <-- CGAGACTAACGAGTGTCGTACTTTCGACAACTGAAACTGAGCTCCATCAT  Raphanus raphanistrum subsp. landra
EX892879       <-- CGAGACTAACGAGTGTCGTACTTACGACAACTGAA...............  Raphanus sativus var. oleiformis
EV565499       --> CGAGACTAACAAGTGTCGTACTTACGACAACTGAAACTGAGCTCCATCAT  Raphanus raphanistrum subsp. landra
EV566987       --> CGAGACTAACGAGTGTCGTACTTACGACAACTGAAACTGAGCTCCATCAT  Raphanus raphanistrum subsp. landra
EV570326       --> CGAGACTAACGAGTGTCGTACTTACGACAACTGAAACTGAGCTCCATCAT  Raphanus raphanistrum subsp. landra
EX889073       --> CGAGACTAACGAGTGTCGTACTTACGACAACTGAAACTGATCTCCATCAT  Raphanus sativus var. oleiformis
FD535199       --> CGAGACTAACGAGTGCCGTACTTACGACAACTGAAACTGATCTCCATCAT  Raphanus raphanistrum subsp. maritimus
FD536202       --> CGAGACTAACGAGTGTCGTACTTACGACAACTGAAACTGATCTCCATCAT  Raphanus raphanistrum subsp. maritimus
FD962112       --> CGAGACTAACGAGTGTCGTACTTACGACAACTGAAACTGATCTCCATCAT  Raphanus raphanistrum subsp. maritimus
FD964243       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD987297       --> CGAGACTAACGAGTGTCGTACTTTCGACAACTGAAACTGAGCTCCATCAT  Raphanus raphanistrum subsp. landra

               445    -    495
UN25202        --> GTTCCAGGATCCCGTCCTTATATTACATAAAAATCATTTGTTTCGGTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572000       <-- GTTCCAGGATCCCGTCCTTATATTACATAAAAATCATTTGTTTCGGTCTA  Raphanus raphanistrum subsp. landra
EV574647       <-- GTTCCAGGATCCCGTCCTTATATTACATAAAAATCATTTGTTTCGGTCTA  Raphanus raphanistrum subsp. landra
FD530911       <-- GTTCCAGGATCCCGTCCTTATATTACATAAAAATCATTTGTTTCGGTCAA  Raphanus raphanistrum subsp. maritimus
FD958727       <-- GTTCCAGGATCCCGTCCTTATATTACATAAAAATCATTTGTTTCGGTCAA  Raphanus raphanistrum subsp. maritimus
FD983372       <-- GTTCCAGGATCCCGTCCTTATATTACATAAAAATCATTTGTTTCGGTCTA  Raphanus raphanistrum subsp. landra
EX892879       <-- ..................................................  Raphanus sativus var. oleiformis
EV565499       --> GTTCCAGGATCCCGTCCTTATATTACATAAAAATCATTTGTTTCGGTCTA  Raphanus raphanistrum subsp. landra
EV566987       --> GTTCCAGGATCCCGTCCTTATATTACATAAAAATCATTTGTTTCGGTCTA  Raphanus raphanistrum subsp. landra
EV570326       --> GTTCCAGGATCCCGTCCTTATATTACATAAAAATCATTTGTTTCGGTCTA  Raphanus raphanistrum subsp. landra
EX889073       --> GTTCCAGGATCCCGTCCTTATATTACATAAAAATCATTTGTTTCGGTCAA  Raphanus sativus var. oleiformis
FD535199       --> GTTCCAGGATCCCGTCCTTATATTACATAAAAATCATTTGTTTCGGTCAA  Raphanus raphanistrum subsp. maritimus
FD536202       --> GTTCCAGGATCCCGTCCTTATATTACATAAAAATCATTTGTTTCGGTCAA  Raphanus raphanistrum subsp. maritimus
FD962112       --> GTTCCAGGATCCCGTCCTTATATTACATAAAAATCATTTGTTTCGGTCAA  Raphanus raphanistrum subsp. maritimus
FD964243       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD987297       --> GTTCCAGGATCCCGTCCTTATATTACATAAAAATCATTTGTTTCGGTCTA  Raphanus raphanistrum subsp. landra

               495    -    545
UN25202        --> TTTGGTGTTATGATATGAATACTGTCTTTGAGACTCAAGCAGGTTATATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572000       <-- TTTGGTGTTATGATATGAATACTGTCTTTGAGACT...............  Raphanus raphanistrum subsp. landra
EV574647       <-- TTTGGTGTTATGATATGAATACTGTCTTTGAGACTC..............  Raphanus raphanistrum subsp. landra
FD530911       <-- TTTGTTGTTATGATATGAATACTGTCTTTGAGACTCAAGCAGGTTATATA  Raphanus raphanistrum subsp. maritimus
FD958727       <-- TTTGTTGTTATGATATGAATACTGTCTTTGAGACTCAAGCAGGTTATATA  Raphanus raphanistrum subsp. maritimus
FD983372       <-- TTTGGTGTTATGATATGAATACTGTCTTTGAGACTCAAGCAGGTTATATA  Raphanus raphanistrum subsp. landra
EX892879       <-- ..................................................  Raphanus sativus var. oleiformis
EV565499       --> TTTGGTGTTATGATATGAATACTGTCTTTGAGACTCAc............  Raphanus raphanistrum subsp. landra
EV566987       --> TTTGGTGTTATGATATGAATACTGTCTTTGAGACT...............  Raphanus raphanistrum subsp. landra
EV570326       --> TTTGGTGTTATGATATGAATACTGTCTTTGAGACTC..............  Raphanus raphanistrum subsp. landra
EX889073       --> TTTGTTGTTATGATATGAATACTGTCTTTGAGACTCAAGCAGGTTATATA  Raphanus sativus var. oleiformis
FD535199       --> TTTGTTGTTATGATATGAATACTGTCTTTGAGACTCAAGCAGGTTATATA  Raphanus raphanistrum subsp. maritimus
FD536202       --> TTTGTTGTTATGATATGAATACTGTCTTTGAGAC................  Raphanus raphanistrum subsp. maritimus
FD962112       --> TTTGTTGTTATGATATGAATACTGTCTTTGAGACTCAAGCAGGTTATATA  Raphanus raphanistrum subsp. maritimus
FD964243       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD987297       --> TTTGGTGTTATGATATGAATACTGTCTTTGAGACTCAAGCAGGTTATATA  Raphanus raphanistrum subsp. landra

               545    -    595
UN25202        --> ATTTGTAATTTTGCAAGATTCATATAATATATAAAAA-GCAACGC.
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572000       <-- ..............................................
EV574647       <-- ..............................................
FD530911       <-- ATTTGTAATTTTGCAAGATTCATATAATATATAAAAA-GCAACGC.
FD958727       <-- ATTTGTAATTTTGCAAGATTCATATAATATAT..............
FD983372       <-- ATTTt.........................................
EX892879       <-- ..............................................
EV565499       --> ..............................................
EV566987       --> ..............................................
EV570326       --> ..............................................
EX889073       --> ATTTGTAATTTTGCAAGATTCATATAATATATAAAAAAGCAACaca
FD535199       --> ATTTGTAATTTTGCAAGATTCATATAATATATAAAAA-GCAACGC.
FD536202       --> ..............................................
FD962112       --> ATTTGTAATTTTGCAAGATTCATATAATATAT..............
FD964243       --> ..............................................
FD987297       --> ATTTtattcatat.................................