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Alignment for radish unigene UN25303

               0      -     50
UN25303        --> .GAAATCGAGCTGACAAATTAAAAAAAAAAAA---GAAATCGCGAAGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730593       <-- .GAAATCGAGCTGACAAATTAAAAAAAAAAAA--AGAAATCGCGAAGAAC  Raphanus sativus cv Early Scarlet Globe
EX759719       <-- gGAAATCGAGTTGACAAATTTAAAAAAAAAA----GAAATCGCGAAGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539838       <-- gGAAATCGAGTTGACAAATTTAAAAAAAAAAA---GAAATCGCGAAGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW729778       <-- .....ggGAGCTGACAAATTAAAAAAAAAAAAAAAGAAATCGCGAAGAAC  Raphanus sativus cv Early Scarlet Globe
FD944393       <-- ......gGAGCTGACAAATTAAAAAAAAAAAG---GAAATCGCGAAGAAC  Raphanus sativus cv Early Scarlet Globe
EW726429       --> .GAAATCGAGCTGACAAATTAAAAAAAAAAAA--AGAAATCGCGAAGAAC  Raphanus sativus cv Early Scarlet Globe
EX755701       --> gGAAATCGAGTTGACAAATTTAAAAAAAAAA----GAAATCGCGAAGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544177       --> gGAAATCGAGTTGACAAATTTAAAAAAAAAAA---GAAATCGCGAAGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW725183       --> .....ggGAGCTGACAAATTAAAAAAAAAAAAAAAGAAATCGCGAAGAAC  Raphanus sativus cv Early Scarlet Globe
FD948635       --> ......gGAGCTGACAAATTAAAAAAAAAAAG---GAAATCGCGAAGAAC  Raphanus sativus cv Early Scarlet Globe
FD542901       --> .......gggtTGACAAATTTAAAAAAAAAAA---GAAATCGCGAAGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)

               50     -    100
UN25303        --> CCTAATTTGGAGATTGAAGATGATGATGATGATGAAATCCGTTTTCTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730593       <-- CCTAATTTGGAGATTGAAGATGATGATGATGATGAAATCCGTTTTCTCAA
EX759719       <-- CCTAATTTGGAGATTGAAGATGATGATGATGATGAAATCCGTTTTCTCAA
FD539838       <-- CCTAATTTGGAGATTGAAGATGATGATGATGATGAAATCCGTTTTCTCAA
EW729778       <-- CCTAATTTGGAGATTGAAGATGATGATGATGATGAAATCCGTTTTCTCAA
FD944393       <-- CCTAATTTGGAGATTGAAGATGATGATGATGATGAAATCCGTTTTCTCAA
EW726429       --> CCTAATTTGGAGATTGAAGATGATGATGATGATGAAATCCGTTTTCTCAA
EX755701       --> CCTAATTTGGAGATTGAAGATGATGATGATGATGAAATCCGTTTTCTCAA
FD544177       --> CCTAATTTGGAGATTGAAGATGATGATGATGATGAAATCCGTTTTCTCAA
EW725183       --> CCTAATTTGGAGATTGAAGATGATGATGATGATGAAATCCGTTTTCTCAA
FD948635       --> CCTAATTTGGAGATTGAAGATGATGATGATGATGAAATCCGTTTTCTCAA
FD542901       --> CCTAATTTGGAGATTGAAGATGATGATGATGATGAAATCCGTTTTCTCAA

               100    -    150
UN25303        --> AGTACGCTCGTGTTCGTGTTCGTGTTCGCTGCGCCAGAAATTTCTCTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730593       <-- AGTACGCTCGTGTTCGTGTTCGTGTTCGCTGCGCCAGAAATTTCTCTACA  Raphanus sativus cv Early Scarlet Globe
EX759719       <-- AGTACGCTCGTGTTCGT------GTTCGCTGCGCCAGAAATTTCTCTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539838       <-- AGTACGCTCGTGTTCGT------GTTCGCTGCGCCAGAAATTTCTCTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW729778       <-- AGTACGCTCGTGTTCGTGTTCGTGTTCGCTGCGCCAGAAATTTCTCTACA  Raphanus sativus cv Early Scarlet Globe
FD944393       <-- AGTACGCTCGTGTTCGTGTTCGTGTTCGCTGCGCCAGAAATTTCTCTACA  Raphanus sativus cv Early Scarlet Globe
EW726429       --> AGTACGCTCGTGTTCGTGTTCGTGTTCGCTGCGCCAGAAATTTCTCTACA  Raphanus sativus cv Early Scarlet Globe
EX755701       --> AGTACGCTCGTGTTCGTGTTCG------CTGCGCCAGAAATTTCTCTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544177       --> AGTACGCTCGTGTTCGTGTTCG------CTGCGCCAGAAATTTCTCTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW725183       --> AGTACGCTCGTGTTCGTGTTCGTGTTCGCTGCGCCAGAAATTTCTCTACA  Raphanus sativus cv Early Scarlet Globe
FD948635       --> AGTACGCTCGTGTTCGTGTTCGTGTTCGCTGCGCCAGAAATTTCTCTACA  Raphanus sativus cv Early Scarlet Globe
FD542901       --> AGTACGCTCGTGTTCGTGTTCG------CTGCGCCAGAAATTTCTCTACA  Raphanus raphanistrum subsp. raphanistrum (MS)

               150    -    200
UN25303        --> GGTCGGCCTTCCTCCTCACATTCTCCCAAGGACACTTCTCTGGGGAGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730593       <-- GGTCGGCCTTCCTCCTCACATTCTCACAAGGACACTTCTCTGGGGAGGCC
EX759719       <-- GGTCGGCCTTCCTCCTCACATTCTCCCAAGGACACTTCTCTGGGGAGGCC
FD539838       <-- GGTCGGCCTTCCTCCTCACATTCTCCCAAGGACACTTCTCTGGGGAGGCC
EW729778       <-- GGTCGGCCTTCCTCCTCACATTCTCCCAAGGACACTTCTCTGGGGAGGCC
FD944393       <-- GGTCGGCCTTCCTCCTCACATTCTCCCAAGGACACTTCTCTGGAGAGGCC
EW726429       --> GGTCGGCCTTCCTCCTCACATTCTCACAAGGACACTTCTCTGGGGAGGCC
EX755701       --> GGTCGGCCTTCCTCCTCACATTCTCCCAAGGACACTTCTCTGGGGAGGCC
FD544177       --> GGTCGGCCTTCCTCCTCACATTCTCCCAAGGACACTTCTCTGGGGAGGCC
EW725183       --> GGTCGGCCTTCCTCCTCACATTCTCCCAAGGACACTTCTCTGGGGAGGCC
FD948635       --> GGTCGGCCTTCCTCCTCACATTCTCCCAAGGACACTTCTCTGGAGAGGCC
FD542901       --> GGTCGGCCTTCCTCCTCACATTCTCCCAAGGACACTTCTCTGGGGAGGCC

               200    -    250
UN25303        --> TCCTCCTCTCAGCGAGGACACTAAGACGATTCTTCCACTCTGGCAGCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730593       <-- TCCTCCTCTCAGCGAGGACACTAAGACGATTCTTCCACTCTGGCAGCAAA
EX759719       <-- TCCTCCTCTCAGCGAGGACACTAAGACGATTCTTCCACTCTGGCAGCAAA
FD539838       <-- TCCTCCTCTCAGCGAGGACACTAAGACGATTCTTCCACTCTGGCAGCAAA
EW729778       <-- TCCTCCTCTCAGCGAGGACACTAAGACGATTCTTCCACTCTGGCAGCAAA
FD944393       <-- TCCTCCTCTCAGCGAGGACACTAAGACGATTCTTCCACTCTGGCAGCAAA
EW726429       --> TCCTCCTCTCAGCGAGGACACTAAGACGATTCTTCCACTCTGGCAGCAAA
EX755701       --> TCCTCCTCTCAGCGAGGACACTAAGACGATTCTTCCACTCTGGCAGCAAA
FD544177       --> TCCTCCTCTCAGCGAGGACACTAAGACGATTCTTCCACTCTGGCAGCAAA
EW725183       --> TCCTCCTCTCAGCGAGGACACTAAGACGATTCTTCCACTCTGGCAGCAAA
FD948635       --> TCCTCCTCTCAGCGAGGACACTAAGACGATTCTTCCACTCTGGCAGCAAA
FD542901       --> TCCTCCTCTCAGCGAGGACACTAAGACGATTCTTCCACTCTGGCAGCAAA

               250    -    300
UN25303        --> TTTT-CGAGATGGGGAAGAAAACTGCATGTGGAGCCTTTGGACTGGCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730593       <-- TTTT-CGAGATGGGGAAGAAAACTGCATGTGGAGCCTTTGGACTGGCTTC
EX759719       <-- TTTTTCGAGATGGGGAAGAAAACTGCATGTGGAGCCTTTGGACTGGCTTC
FD539838       <-- TTTT-CGAGATGGGGAAGAAAACTGCATGTGGAGCCTTTGGACTGGCTTC
EW729778       <-- TTTT-CGAGATGGGGAAGAAAACTGCATGTGGAGCCTTTGGACTGGCTTC
FD944393       <-- TTTT-CGAGATGGGGAAGAAAACTGCATGTGGAGCCTTTGGACTGGCTTC
EW726429       --> TTTT-CGAGATGGGGAAGAAAACTGCATGTGGAGCCTTTGGACTGGCTTC
EX755701       --> TTTTTCGAGATGGGGAAGAAAACTGCATGTGGAGCCTTTGGACTGGCTTC
FD544177       --> TTTT-CGAGATGGGGAAGAAAACTGCATGTGGAGCCTTTGGACTGGCTTC
EW725183       --> TTTT-CGAGATGGGGAAGAAAACTGCATGTGGAGCCTTTGGACTGGCTTC
FD948635       --> TTTT-CGAGATGGGGAAGAAAACTGCATGTGGAGCCTTTGGACTGGCTTC
FD542901       --> TTTT-CGAGATGGGGAAGAAAACTGCATGTGGAGCCTTTGGACTGGCTTC

               300    -    350
UN25303        --> TGGATATAAACTCGCTTCTGTTGTACTGCCTGATCATTCAGAACCTCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730593       <-- TGGATATAAACTCGCTTCTGTTGTACTGCCTGATCATTCAGAACCTCTTA  Raphanus sativus cv Early Scarlet Globe
EX759719       <-- TGGATATAAACTCTCTTCTGTTGTACTGCCTGATCATTCAGAACCTCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539838       <-- TGGATATAAACTCTCTTCTGTTGTACTGCCTGATCATTCAGAACCTCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW729778       <-- TGGATATAAACTCGCTTCTGTTGTACTGCCTGATCATTCAGAACCTCTTA  Raphanus sativus cv Early Scarlet Globe
FD944393       <-- TGGATATAAACTCGCTTCTGTTGTACTGCCTGATCATTCAGAACCTCTTA  Raphanus sativus cv Early Scarlet Globe
EW726429       --> TGGATATAAACTCGCTTCTGTTGTACTGCCTGATCATTCAGAACCTCTTA  Raphanus sativus cv Early Scarlet Globe
EX755701       --> TGGATATAAACTCTCTTCTGTTGTACTGCCTGATCATTCAGAACCTCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544177       --> TGGATATAAACTCTCTTCTGTTGTACTGCCTGATCATTCAGAACCTCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW725183       --> TGGATATAAACTCGCTTCTGTTGTACTGCCTGATCATTCAGAACCTCTTA  Raphanus sativus cv Early Scarlet Globe
FD948635       --> TGGATATAAACTCGCTTCTGTTGTACTGCCTGATCATTCAGAACCTCTTA  Raphanus sativus cv Early Scarlet Globe
FD542901       --> TGGATATAAACTCTCTTCTGTTGTACTGCCTGATCATTCAGAACCTCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)

               350    -    400
UN25303        --> TAAGAGAGGAACAGTTTACTAGAGCTTGTATGGAAAGGATTAAAAAA-TT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730593       <-- TAAGAGAGGAACAGTTTACTAGAGCTTGTATGGAAAGGATTAAAAAA-TT
EX759719       <-- TAAGAGAGGAACAGTTTACTAGAGCTTGTATGGAAAGGATTAAAAAA-TT
FD539838       <-- TAAGAGAGGAACAGTTTACTAGAGCTTGTATGGAAAGGATTAAAAAA-TT
EW729778       <-- TAAGAGAGGAACAGTTTACTAGAGCTTGTATGGAAAGGATTAAAAAAATT
FD944393       <-- TAAGAGAGGAACAGTTTACTAGAGCTTGTATGGAAAGGATTAAAAAA-TT
EW726429       --> TAAGAGAGGAACAGTTTACTAGAGCTTGTATGGAAAGGATTAAAAAA-TT
EX755701       --> TAAGAGAGGAACAGTTTACTAGAGCTTGTATGGAAAGGATTAAAAAA-TT
FD544177       --> TAAGAGAGGAACAGTTTACTAGAGCTTGTATGGAAAGGATTAAAAAA-TT
EW725183       --> TAAGAGAGGAACAGTTTACTAGAGCTTGTATGGAAAGGATTAAAAAAATT
FD948635       --> TAAGAGAGGAACAGTTTACTAGAGCTTGTATGGAAAGGATTAAAAAA-TT
FD542901       --> TAAGAGAGGAACAGTTTACTAGAGCTTGTATGGAAAGGATTAAAAAA-TT

               400    -    450
UN25303        --> CTTGATCGACTACGCTGACAAGTAGTTGAAGAGGCTGGTGGAAGGAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730593       <-- CTTGATCGACTACGCTGACAAGTAGTTGAAGAGGCTGGTGGAAGGAAGAG
EX759719       <-- CTTGATCGACTACGCTGACAAGTAGTTGAAGAGGCTGGTGGAAGGAAGGG
FD539838       <-- CTTGATCGACTACGCTGACAAGTAGTTGAAGAGGCTGGTGGAAGGAAGAG
EW729778       <-- CTTGATCGACTACGCTGACAAGTAGTTGAAGAGGCTGGTGGAAGGAAGAG
FD944393       <-- CTTGATCGACTACGCTGACAAGTAGTTGAAGAGGCTGGTGGAAGGAAGAG
EW726429       --> CTTGATCGACTACGCTGACAAGTAGTTGAAGAGGCTGGTGGAAGGAAGAG
EX755701       --> CTTGATCGACTACGCTGACAAGTAGTTGAAGAGGCTGGTGGAAGGAAGGG
FD544177       --> CTTGATCGACTACGCTGACAAGTAGTTGAAGAGGCTGGTGGAAGGAAGAG
EW725183       --> CTTGATCGACTACGCTGACAAGTAGTTGAAGAGGCTGGTGGAAGGAAGAG
FD948635       --> CTTGATCGACTACGCTGACAAGTAGTTGAAGAGGCTGGTGGAAGGAAGAG
FD542901       --> CTTGATCGACTACGCTGACAAGTAGTTGAAGAGGCTGGTGGAAGGAAGAG

               450    -    500
UN25303        --> TTTGATTCTTACTTAAGTTGCAATAACAAGATTTCTGTTCCAACTATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730593       <-- TTTGATTCTTACTTAAGTTGCAATAACAAGATTTCTGTTCCAACTATCTT
EX759719       <-- TTTGATTCTTACTTAAGTTGCAATAACAAGATTTCTGTTCCAACTATCTT
FD539838       <-- TTTGATTCTTACTTAAGTTGCAATAACAAGATTTCTGTTCCAACTATCTT
EW729778       <-- TTTGATTCTTACTTAAGTTGCAATAACAAGATTTCTGTTCCAACTATCTT
FD944393       <-- TTTGATTCTTACTTAAGTTGCAATAACAAGATTTCTGTTCCAACTATCTT
EW726429       --> TTTGATTCTTACTTAAGTTGCAATAACAAGATTTCTGTTCCAACTATCTT
EX755701       --> TTTGATTCTTACTTAAGTTGCAATAACAAGATTTCTGTTCCAACTATCTT
FD544177       --> TTTGATTCTTACTTAAGTTGCAATAACAAGATTTCTGTTCCAACTATCTT
EW725183       --> TTTGATTCTTACTTAAGTTGCAATAACAAGATTTCTGTTCCAACTATCTT
FD948635       --> TTTGATTCTTACTTAAGTTGCAATAACAAGATTTCTGTTCCAACTATCTT
FD542901       --> TTTGATTCTTACTTAAGTTGCAATAACAAGATTTCTGTTCCAACTATCTT

               500    -    550
UN25303        --> TATCTATTTATGCTGTAATAACAAAGACTGATCTCATCATAGTTTACGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730593       <-- TATCTATTTATGCTGTAATAACAAAGACTGATCTCATCATAGTTTACGTT
EX759719       <-- TATCTATTTATGCTGTAATAACAAAGACTGATCTCATCATAGTTTACGTT
FD539838       <-- TATCTATTTATGCTGTAATAACAAAGACTGATCTCATCATAGTTTACGTT
EW729778       <-- TATCTATTTATGCTGTAATAACAAAGACTGATCTCATCATAGTTTACGTT
FD944393       <-- TATCTATTTATGCTGTAATAACAAAGACTGATCTCATCATAGTTTACGTT
EW726429       --> TATCTATTTATGCTGTAATAACAAAGACTGATCTCATCATAGTTTACGTT
EX755701       --> TATCTATTTATGCTGTAATAACAAAGACTGATCTCATCATAGTTTACGTT
FD544177       --> TATCTATTTATGCTGTAATAACAAAGACTGATCTCATCATAGTTTACGTT
EW725183       --> TATCTATTTATGCTGTAATAACAAAGACTGATCTCATCATAGTTTACGTT
FD948635       --> TATCTATTTATGCTGTAATAACAAAGACTGATCTCATCATAGTTTACGTT
FD542901       --> TATCTATTTATGCTGTAATAACAAAGACTGATCTCATCATAGTTTACGTT

               550    -    600
UN25303        --> TTCTGTTTTGTTTTGTGGTTTGTCATGTCTTCTTCTTTGGATTGTTGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730593       <-- TTCTGTTTTGTTTTGTGGTTTGTCATGTCTTCTTCTTTGGATTGTTGGTC
EX759719       <-- TTCTGTTTTGTTTTGTGGTTTGTCATGTCTTCTTCTTTGGATTGTTGGTC
FD539838       <-- TTCTGTTTTGTTTTGTGGTTTGTCGTGTCTTCTTCTTTGGATTGTTGGTC
EW729778       <-- TTCTGTTTTGTTTTGTGGTTTGTCATGTCTTCTTCTTTGGATTGTTGGTC
FD944393       <-- TTCTGTTTTGTTTTGTGGTTTGTCATGTCTTCTTCTTTGGATTGTTGGTC
EW726429       --> TTCTGTTTTGTTTTGTGGTTTGTCATGTCTTCTTCTTTGGATTGTTGGTC
EX755701       --> TTCTGTTTTGTTTTGTGGTTTGTCATGTCTTCTTCTTTGGATTGTTGGTC
FD544177       --> TTCTGTTTTGTTTTGTGGTTTGTCGTGTCTTCTTCTTTGGATTGTTGGTC
EW725183       --> TTCTGTTTTGTTTTGTGGTTTGTCATGTCTTCTTCTTTGGATTGTTGGTC
FD948635       --> TTCTGTTTTGTTTTGTGGTTTGTCATGTCTTCTTCTTTGGATTGTTGGTC
FD542901       --> TTCTGTTTTGTTTTGTGGTTTGTCATGTCTTCTTCTTTGGATTGTTGGTC

               600    -    650
UN25303        --> ATCTTCATGAATTAAGTTGTCTCTCTCTCTCTCTTCTTACACTATCATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730593       <-- ATCTTCATGAATTAAGTTGTCTC...........................
EX759719       <-- ATCTTCATGAATTAAGTTGTCTCTCTCTCTCTCTTCTTACACTATCATTT
FD539838       <-- ATCTTCATGAATTAAGTTGTCcc...........................
EW729778       <-- ATCTTCATGAATTAAGTTGTCTCTCTCTCTCTCag...............
FD944393       <-- ATCTTCATGAATTAAGTTGTCTCTCTCTCcc...................
EW726429       --> ATCTTCATGAATTAAGTTGTCTC...........................
EX755701       --> ATCTTCATGAATTAAGTTGTCTCTCTCTCTCTCTTCTTACACTATCATTT
FD544177       --> ATCTTCATGAATTAAGTTGTCcc...........................
EW725183       --> ATCTTCATGAATTAAGTTGTCTCTCTCTCTCTCag...............
FD948635       --> ATCTTCATGAATTAAGTTGTCTCTCTCTCcca..................
FD542901       --> ATCTTCATGAATTAAGTTGTCTCTCTCTCTCTCTTCTTACACTATCATTT

               650    -    700
UN25303        --> GCTTGCCTTTGGGTGTTCCATCTTTCCATCTATAAATCAAAATAGTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730593       <-- .................................................
EX759719       <-- GCTTGCC..........................................
FD539838       <-- .................................................
EW729778       <-- .................................................
FD944393       <-- .................................................
EW726429       --> .................................................
EX755701       --> GCTTGCCaaaaaaa...................................
FD544177       --> .................................................
EW725183       --> .................................................
FD948635       --> .................................................
FD542901       --> GCTTGCTTTTGGGTGTTCCATCTTTCCATCTATAAATCAAAATAGTTGA