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Alignment for radish unigene UN25412

               1      -     51
UN25412        --> GGACATCCAAATCCAATAGCAACAAAAAA-GGGTCTGCTC---CTTA---
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547988       <-- ..........................AAA-GGGTCTGCTCTTAATTA---
EW722060       <-- ..................................................
EX894024       <-- ..................................................
FD553166       <-- ..................................................
EY909675       <-- ..................................................
EV574304       <-- ..................................................
FD935105       <-- ..................................................
FD969311       <-- ..................................................
EW719647       <-- ..................................................
EV539593       --> GGACATCCAAATCCAATAGCAACAAAAAA-GGGTCTGCTC---CTTA---
EW714529       --> GGACATCCAAATCCAATAGCAACAAAAAA-GGGTCTGCTC---CTTA---
EY913450       --> GGACATCCAAATCCAATAGCAACAAAAAA-GGGTCTGCTC---CTTAATT
FD552162       --> GGACATCCAAATCCAATAGCAACAAAAAA-GGGTCTGCTC---CTTAATT
FD556959       --> GGACATCCAAATCCAATACCAACAAAAAA-GGGTCTGCTC---CTTA---
FD937585       --> GGACATCCAAATCCAATAGCAACAAAAAAAGGGTCTGCTC---CTTA---
FD937606       --> GGACATCCAAATCCAATAGCAACAAAAAAAGGGTCTGCTC---CTTA---
FD937840       --> GGACATCCAAATCCAATAGCAACAAAAAAAGGGTCTGCTC---CTTA---
FD938838       --> GGACATCCAAATCCAATAGCAACAAAAAA-GGGCCTGCTC---CTTA---
FD969824       --> GGACATCCAAATCCAATAGCAACAAAAAA-GGGTCTGCTC---CTTA---
EX890527       --> .GACATCCAAATCCAATAGCAACAAAAAA-GGGTCTGCTC---CTTA---
FD561595       --> .GACATCCAAATCCAATAGCAACAAAAAA-GGGTCTGCTC---CTTA---
FD973661       --> .GACATCCAAATCCAATAGCAACAAAAAA-GGGTCTGCTC---CTTA---
EW718326       --> ..ggATCCAAATCCAATAGCAACAAAAAA-GGGTCTGCTC---CTTA---
EV569862       --> ..................................................
EX888722       --> ..................................................

               51     -    101
UN25412        --> -GTTTCATATACAATCTTTAGCAATCTTAACAACATGTCAATGTTCATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547988       <-- -GTTTCATATACAATCTTTAGCAATCTTAACAACATGGCAATGTTCATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722060       <-- ...TTCATATACAATCTTTAGCAATCTTAACAACATGTCAATGTTCATCA  Raphanus sativus var. oleiformis
EX894024       <-- ...TTCATATACAATCTTTAGCAATCTTAACAACATGTCAATGTTCATCA  Raphanus sativus var. oleiformis
FD553166       <-- ...TTCATATACAATCTTTAGCAATCTTAACAACATGGCAATGTTCATCA  Raphanus raphanistrum subsp. landra
EY909675       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV574304       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD935105       <-- ..................................................  Raphanus sativus var. oleiformis
FD969311       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW719647       <-- ..................................................  Raphanus sativus var. oleiformis
EV539593       --> -GTTTCATATACAATCTTTAGCAATCTTAACAACATGGCAATGTTCATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714529       --> -GTTTCATATACAATCTTTAGCAATCTTAACAACATGTCAATGTTCATCA  Raphanus sativus var. oleiformis
EY913450       --> AGTTTCATATACAATCTTTAGCAGTCTTAACAACATGGCAATGTTCATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552162       --> AGTTTCATATACAATCTTTAGCAATCTTAACAACATGGCAATGTTCATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556959       --> -GTTTCATATACAATCTTTAGCAATCTTAACAACATGGCAATGTTCATCA  Raphanus raphanistrum subsp. landra
FD937585       --> -GTTTCATATACAATCTTTAGCAATCTTAACAACATGTCAATGTTCATCA  Raphanus sativus var. oleiformis
FD937606       --> -GTTTCATATACAATCTTTAGCAATCTTAACAACATGTCAATGTTCATCA  Raphanus sativus var. oleiformis
FD937840       --> -GTTTCATATACAATCTTTAGCAATCTTAACAACATGTCAATGTTCATCA  Raphanus sativus var. oleiformis
FD938838       --> -GTTTCATATACAATCTTTAGCAATCTTAACAACATGTCAATGTTCATCA  Raphanus sativus var. oleiformis
FD969824       --> -GTTTCATATACAATCTTTAGCAATCTTAACAACATGGCAATGTTCATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX890527       --> -GTTTCATATACAATCTTTAGCAATCTTAACAACATGTCAATGTTCATCA  Raphanus sativus var. oleiformis
FD561595       --> -GTTTCATATACAATCTTTAGCAATCTTAACAACATGTCAATGTTCATCA  Raphanus sativus var. oleiformis
FD973661       --> -GTTTCTTATACAATCTTTAGCAATCTTAGCAACATGGCAATGTTCATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW718326       --> -GTTTCATATACAATCTTTAGCAATCTTAACAACATGTCAATGTTCATCA  Raphanus sativus var. oleiformis
EV569862       --> ..................................................  Raphanus raphanistrum subsp. landra
EX888722       --> ..................................................  Raphanus sativus var. oleiformis

               101    -    151
UN25412        --> AGAACAAGAACATGGCCTTCTCACTGATCTTGATGTGTTTCATTGTGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547988       <-- AGAACAAGAACGTGGCCTTCTCACTGATCTTGATGTGTTTCATTGTGGTG
EW722060       <-- AGAACAAGAACATGGCCT-CTCACTGATCTTGATGTGTTTCATTGTGGTG
EX894024       <-- AGAACAAGAACATGGCCTTCTCACTGATCTTGATGTGTTTCATTGTGGTG
FD553166       <-- AGAACAAGAACATGGCCTTCTCACTGATCTTGATGTGTTTCATTGTGGTG
EY909675       <-- ..........cgTGGCCTTCTCACTGATCTTGATGTGTTTCATTGTGGTG
EV574304       <-- .................gTCTCACTGATCTTGATGTGTTTCATTGTGGTG
FD935105       <-- ..................................................
FD969311       <-- ..................................................
EW719647       <-- ..................................................
EV539593       --> AGAACAAGAACATGGCCTTCTCACTGATCTTGATGTGTTTCATTGTGGTG
EW714529       --> AGAACAAGAACATGGCCTTCTCACTGATCTTGATGTGTTTCATTGTGGTG
EY913450       --> AGAACAAGAACGTGGCCTTCTCACTGATCTTGATGTGTTTCATTGTGGTG
FD552162       --> AGAACAAGAACGTGGCCTTCTCACTGATCTTGATGTGTTTCATTGTGGTG
FD556959       --> AGAACAAGAACATGGCCTTCTCACTGATCTTGATGTGTTTCATTGTGGTG
FD937585       --> AGAACAAGAACATGGCCTTCTCACTGATCTTGATGTGTTTCATTGTGGTG
FD937606       --> AGAACAAGAACATGGCCTTCTCACTGATCTTGATGTGTTTCATTGTGGTG
FD937840       --> AGAACAAGAACATGGCCTTCTCACTGATCTTGATGTGTTTCATTGTGGTG
FD938838       --> AGAACAAGAACATGGCCTTCTCACTGATCTTGATGTGTTTCATTGTGGTG
FD969824       --> AGAACAAGAACATGGCCTTCTCACTGATCTTGATGTGTTTCATTGTGGTG
EX890527       --> AGAACAAGAACATGGCCTTCTCACTGATCTTGATGTGTTTCATTGTGGTG
FD561595       --> AGAACAAGAACATGGCCTTCTCACTGATCTTGATGTGTTTCATTGTGGTG
FD973661       --> AGAACAAGAACATGGCCTTCTCACTGATCTTGATGTGTTTCATTGTGGTG
EW718326       --> AGAACAAGAACATGGCCT-CTCACTGATCTTGATGTGTTTCATTGTGGTG
EV569862       --> .................gTCTCACTGATCTTGATGTGTTTCATTGTGGTG
EX888722       --> ..................................................

               151    -    201
UN25412        --> TCTCCAATGGCCAATGCTCAATTTGGTGGGCTTCCTGGGACTAATATCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547988       <-- TCTCCAATGGCCAATGCTCAATTTGGTGGGCTTCCTGGGACTAATATCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722060       <-- TCTCCAATGGCCAATGCTCAATTTGGTGGGCTTCCTGGGACTAATATCGT  Raphanus sativus var. oleiformis
EX894024       <-- TCTCCAATGGCCAATGCTCAATTTGGTGGGCTTCCTGGGACTAATATCGT  Raphanus sativus var. oleiformis
FD553166       <-- TCTCCAATGGCTAATGCTCAATTTGGTGGGCTTCCTGGGACTAATATCCT  Raphanus raphanistrum subsp. landra
EY909675       <-- TCTCCAATGGCCAATGCTCAACTTGGTGGGCTTCCTGGGACTAATATCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV574304       <-- TCTCCAATGGCTAATGCTCAATTTGGTGGGCTTCCTGGGACTAATATCCT  Raphanus raphanistrum subsp. landra
FD935105       <-- ..................................................  Raphanus sativus var. oleiformis
FD969311       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW719647       <-- ..................................................  Raphanus sativus var. oleiformis
EV539593       --> TCTCCAATGGCTAATGCTCAATTTGGTGGGCTTCCTGGGACTAATATCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714529       --> TCTCCAATGGCCAATGCTCAATTTGGTGGGCTTCCTGGGACTAATATCGT  Raphanus sativus var. oleiformis
EY913450       --> TCTCCAATGGCCAATGCTCAACTTGGTGGGCTTCCTGGGACTAATATCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552162       --> TCTCCAATGGCCAATGCTCAATTTGGTGGGCTTCCTGGGACTAATATCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556959       --> TCTCCAATGGCTAATGCTCAATTTGGTGGGCTTCCTGGGACTAATATCCT  Raphanus raphanistrum subsp. landra
FD937585       --> TCTCCAATGGCCAATGCTCAATTTGGTGGGCTTCCTGGGACTAATATCGT  Raphanus sativus var. oleiformis
FD937606       --> TCTCCAATGGCCAATGCTCAATTTGGTGGGCTTCCTGGGACTAATATCGT  Raphanus sativus var. oleiformis
FD937840       --> TCTCCAATGGCCAATGCTCAATTTGGTGGGCTTCCTGGGACTAATATCGT  Raphanus sativus var. oleiformis
FD938838       --> TCTCCAATGGCCAATGCTCAATTTGGTGGGCTTCCTGGGACTAATATCGT  Raphanus sativus var. oleiformis
FD969824       --> TCTCCAATGGCTAATGCTCAATTTGGTGGGCTTCCTGGGACTAATATCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX890527       --> TCTCCAATGGCCAATGCTCAATTTGGTGGGCTTCCTGGGACTAATATCGT  Raphanus sativus var. oleiformis
FD561595       --> TCTCCAATGGCCAATGCTCAATTTGGTGGGCTTCCTGGGACTAATATCGT  Raphanus sativus var. oleiformis
FD973661       --> TCCCCAATGGCTAATGCTCAATTTGGTGGGCTTCCTGGGACTAATATCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW718326       --> TCTCCAATGGCCAATGCTCAATTTGGTGGGCTTCCTGGGACTAATATCGT  Raphanus sativus var. oleiformis
EV569862       --> TCTCCAATGGCTAATGCTCAATTTGGTGGGCTTCCTGGGACTAATATCCT  Raphanus raphanistrum subsp. landra
EX888722       --> ..................................................  Raphanus sativus var. oleiformis

               201    -    251
UN25412        --> CAATATACAAGGGCTTGTCACGTGCTCTATCAATGGCAGCGTCTCTACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547988       <-- CAATATACAAGGGCTTGTCACGTGCTCTATCAATGGCAGCGTCTCTACTA
EW722060       <-- CAATATACAAGGGCTTGTCACGTGCTCTATCAATGGCAGCGTCTCTACTA
EX894024       <-- CAATATACAAGGGCTTGTCACGTGCTCTATCAATGGCAGCGTCTCTACTA
FD553166       <-- CAATATACAAGGGCTTGTCACGTGCTCTATCAATGGCAGCGTCTCTACTA
EY909675       <-- CAATATACAAGGGCTTGTCACGTGCTCTATCAATGGCAGCGTCTCTACTA
EV574304       <-- CAATATACAAGGGCTTGTCACGTGCTCTATCAATGGCAGCGTCTCTACTA
FD935105       <-- .........................................TCTCTACTA
FD969311       <-- ..................................................
EW719647       <-- ..................................................
EV539593       --> CAATATACAAGGGCTTGTCACATGCTCTATCAATGGCAGCGTCTCTACTA
EW714529       --> CAATATACAAGGGCTTGTCACGTGCTCTATCAATGGCAGCGTCTCTACTA
EY913450       --> CAATATACAAGGGCTTGTCACGTGCTCTATCAATGGCAGCGTCTCTACTA
FD552162       --> CAATATACAAGGGCTTGTCACGTGCTCTATCAATGGCAGCGTCTCTACTA
FD556959       --> CAATATACAAGGGCTTGTCACGTGCTCTATCAATGGCAGCGTCTCTACTA
FD937585       --> CAATATACAAGGGCTTGTCACGTGCTCTATCAATGGCAGCGTCTCTACTA
FD937606       --> CAATATACAAGGGCTTGTCACGTGCTCTATCAATGGCAGCGTCTCTACTA
FD937840       --> CAATATACAAGGGCTTGTCACGTGCTCTATCAATGGCAGCGTCTCTACTA
FD938838       --> CAATATACAAGGGCTTGTCACGTGCTCTATCAATGGCAGCGTCTCTACTA
FD969824       --> CAATATACAAGGGCTTGTCACGTGCTCTATCAATGGCAGCGTCTCTACTA
EX890527       --> CAATATACAAGGGCTTGTCACGTGCTCTATCAATGGCAGCGTCTCTACTA
FD561595       --> CAATATACAAGGGCTTGTCACGTGCTCTATCAATGGCAGCGTCTCTACTA
FD973661       --> CAATATACAAGGGCTTGTCACGTGCTCTATCAATGGCAGCGTCTCTACTA
EW718326       --> CAATATACAAGGGCTTGTCACGTGCTCTATCAATGGCAGCGTCTCTACTA
EV569862       --> CAATATACAAGGGCTTGTCACGTGCTCTATCAATGGCAGCGTCTCTACTA
EX888722       --> ..................................................

               251    -    301
UN25412        --> ATGGGACTGTCATTCCTCCTTTCGCCGGTGTACCCGTTGTGCTTCAGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547988       <-- ATGGGACTGTCATTCCTCCTTTCGCCGGTGTACCCGTTGTGCTTCAGTGT
EW722060       <-- ATGGGACTGTCATTCCTCCTTTCGCCGGTGTACCCGTTGTGCTTCAGTGT
EX894024       <-- ATGGGACTGTCATTCCTCCTTTCGCCGGTGTACCCGTTGTGCTTCAGTGT
FD553166       <-- ATGGGACTGTCATTCCTCCTTTCGCCGGTGTACCCGTTGTGCTTCAGTGT
EY909675       <-- ATGGGACTGTCATTCCTCCTTTCGCCGGTGTACCCGTTGTGCTTCAGTGT
EV574304       <-- ATGGGACTGTCATTCCTCCTTTCGCCGGTGTACCCGTTGTGCTTCAGTGT
FD935105       <-- ATGGGACTGTCATTCCTCCTTTCGCCGGTGTACCCGTTGTGCTTCAGTGT
FD969311       <-- ..................................................
EW719647       <-- ..................................................
EV539593       --> ATGGGACTGTCATTCCTCCTTTCGCCGGTGTACCCGTTGTGCTTCAGTGT
EW714529       --> ATGGGACTGTCATTCCTCCTTTCGCCGGTGTACCCGTTGTGCTTCAGTGT
EY913450       --> ATGGGACTGTCATTCCTCCTTTCGCCGGTGTACCCGTTGTGCTTCAGTGT
FD552162       --> ATGGGACTGTCATTCCTCCTTTCGCCGGTGTACCCGTTGTGCTTCAGTGT
FD556959       --> ATGGGACTGTCATTCCTCCTTTCGCCGGTGTACCCGTTGTGCTTCAGTGT
FD937585       --> ATGGGACTGTCATTCCTCCTTTCGCCGGTGTACCCGTTGTGCTTCAGTGT
FD937606       --> ATGGGACTGTCATTCCTCCTTTCGCCGGTGTACCCGTTGTGCTTCAGTGT
FD937840       --> ATGGGACTGTCATTCCTCCTTTCGCCGGTGTACCCGTTGTGCTTCAGTGT
FD938838       --> ATGGGACTGTCATTCCTCCTTTCGCCGGTGTACCCGTTGTGCTTCAGTGT
FD969824       --> ATGGGACTGTCATTCCTCCTTTCACCGGTGTACCCGTTGTGCTTCAGTGT
EX890527       --> ATGGGACTGTCATTCCTCCTTTCGCCGGTGTACCCGTTGTGCTTCAGTGT
FD561595       --> ATGGGACTGTCATTCCTCCTTTCGCCGGTGTACCCGTTGTGCTTCAGTGT
FD973661       --> ATGGGACTGTCATTCCTCCTTTCGCCGGTGTACCCGTTGTGCTTCAGTGT
EW718326       --> ATGGGACTGTCATTCCTCCTTTCGCCGGTGTACCCGTTGTGCTTCAGTGT
EV569862       --> ATGGGACTGTCATTCCTCCTTTCGCCGGTGTACCCGTTGTGCTTCAGTGT
EX888722       --> ................................gCCGTTGTGCTTCAGTGT

               301    -    351
UN25412        --> GCTGGGCAAAATGTTTCAACTACGACTACGGGAGCTAATGGAGTATTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547988       <-- GCTGGGCAAAATGTTTCAACTACGACTACGGGAGCTAATGGAGTATTCTC
EW722060       <-- GCTGGGCAAAATGTTTCAACTACGACTACGGGAGCTAATGGAGTATTCTC
EX894024       <-- GCTGGGCAAAATGTTTCAACTACGACTACGGGAGCTAATGGAGTATTCTC
FD553166       <-- GCTGGGCAAAATGTTTCAACTACGACTACGGGAGCTAATGGAGTATTCTC
EY909675       <-- GCTGGGCAAAATGTTTCAACTACGACTACGGGAGCTAATGGAGTATTCTC
EV574304       <-- GCTGGGCAAAATGTTTCAACTACGACTACGGGAGCTAATGGAGTATTCTC
FD935105       <-- GCTGGGCAAAATGTTTCAACTACGACTACGGGAGCTAATGGAGAATTCTC
FD969311       <-- ..................................................
EW719647       <-- ..................................................
EV539593       --> GCTGGGCAAAATGTTTCAACTACGACTACGGGAGCTAATGGAGTATTCTC
EW714529       --> GCTGGGCAAAATGTTTCAACTACGACTACGGGAGCTAATGGAGTATTCTC
EY913450       --> GCTGGGCAAAATGTTTCAACTACGACTACGGGAGCTAATGGAGTATTCTC
FD552162       --> GCTGGGCAAAATGTTTCAACTACGACTACGGGAGCTAATGGAGTATTCTC
FD556959       --> GCTGGGCAAAATGTTTCAACTACGACTACGGGAGCTAATGGAGTATTCTC
FD937585       --> GCTGGGCAAAATGTTTCAACTACGGCTACGGGAGCTAATGGAGTATTCTC
FD937606       --> GCTGGGCAAAATGTTTCAACTACGGCTACGGGAGCTAATGGAGTATTCTC
FD937840       --> GCTGGGCAAAATGTTTCAACTACGGCTACGGGAGCTAATGGAGTATTCTC
FD938838       --> GCTGGGCAAAATGTTTCAACTACGACTACGGGAGCTAATGGAGAATTCTC
FD969824       --> GCTGGGCAAAATGTTTCAACTACGACTACGGGAGCTAATGGAGTATTCTC
EX890527       --> GCTGGGCAAAATGTTTCAACTACGACTACGGGAGCTAATGGAGTATTCTC
FD561595       --> GCTGGGCAAAATGTTTCAACTACGACTACGGGAGCTAATGGAGTATTCTC
FD973661       --> GTTGGGCAAAATGTTTCAACTACGACTACGGGAGCTAATGGAGTATTCTC
EW718326       --> GCTGGGCAAAATGTTTCAACTACGACTACGGGAGCTAATGGAGTATTCTC
EV569862       --> GCTGGGCAAAATGTTTCAACTACGACTACGGGAGCTAATGGAGTATTCTC
EX888722       --> GCTGGGCAAAATGTTTCAACTACGATTACGGGAGCTAATGGAGTATTCTC

               351    -    401
UN25412        --> GTTTCCTTCCACTACAGTATTTCCGATCTCGCTGCTTTCCACACTCCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547988       <-- GTTTCCTTCCACTACAGTATTTCCGATCTCGCTGCTTTCCACACTCCTTG
EW722060       <-- GTTTCCTTCCACTACAGTATTTCCGATCTCGCTGCTTTCCACACTCCTTG
EX894024       <-- GTTTCCTTCCACTACAGTATTTCCGATCTCGCTGCTTTCCACACTCCTTG
FD553166       <-- GTTTCCTTCCACTACAGTATTTCCGATCTCGCTGCTTTCCACACTCCTTG
EY909675       <-- GTTTCCTTCCACTACAGTATTTCCGATCTCGCTGCTTTCCACACTCCTTG
EV574304       <-- GTTTCCTTCCACTACAGTATTTCCGATCTCGCTGCTTTCCACACTCCTTG
FD935105       <-- GTTTCCTTCCACTACAGTATTTCCGATCTCGCTGCTTTCCACACTCCTTG
FD969311       <-- .TTTCCTTCCACTACAGTATTTCCGATCTCGCTGCTTTCCACACTCCTTG
EW719647       <-- ............................TCGCTGCTTTCCACACTCCTTG
EV539593       --> GTTTCCTTCCACTACAGTATTTCCGATCTCGCTGCTTTCCACACTCCTTG
EW714529       --> GTTTCCTTCCACTACAGTATTTCCGATCTCGCTGCTTTCCACACTCCTTG
EY913450       --> GTTTCCTTCCACTACAGTATTTCCGATCTCGCTGCTTTCCACACTCCTTG
FD552162       --> GTTTCCTTCCACTACAGTATTTCCGATCTCGCTGCTTTCCACACTCCTTG
FD556959       --> GTTTCCTTCCACTACAGTATTTCCGATCTCGCTGCTTTCCACACTCCTTG
FD937585       --> GTTTCCTTCCACTACAGTATTTCCGATCTCGCTGCTTTCCACACTCCTTG
FD937606       --> GTTTCCTTCCACTACAGTATTTCCGATCTCGCTGCTTTCCACACTCCTTG
FD937840       --> GTTTCCTTCCACTACAGTATTTCCGATCTCGCTGCTTTCCACACTCCTTG
FD938838       --> GTTTCCTTCCACTACAGTATTTCCGATCTCGCTGCTTTCCACACTCCTTG
FD969824       --> GTTTCCTTCCACTACAGTATTTCCGATCTCGCTGCTTTCCACACTCCTTG
EX890527       --> GTTTCCTTCCACTACAGTATTTCCGATCTCGCTGCTTTCCACACTCCTTG
FD561595       --> GTTTCCTTCCACTACAGTATTTCCGATCTCGCTGCTTTCCACACTCCTTG
FD973661       --> GTTTCCTTCCACTACAGTATTTCCGATCTCGCTGCTTTCCACACTCCTTG
EW718326       --> GTTTCCTTCCACTACAGTATTTCCGATCTCGCTGCTTTCCACACTCCTTG
EV569862       --> GTTTCCTTCCACTACAGTATTTCCGATCTCGCTGCTTTCCACACTCCTTG
EX888722       --> GTTTCCTTCCACTACAGTATTTCCGATCTCGCTGCTTTCCACACTCCTTG

               401    -    451
UN25412        --> CCTCCGGTTGTAGGGTCATTGTCACGGCCCCTCTCTCCAGATGCAACGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547988       <-- CCTCCGGTTGTAGGGTCATTGTCACGGCCCCTCTCTCCAGATGCAACGCC
EW722060       <-- CCTCCGGTTGTAGGGTCATTGTCACGGCCCCTCTCCCCAGATGCAACGCC
EX894024       <-- CCTCCGGTTGTAGGGTCATTGTCACGGCCCCTCTCTCCAGATGCAACGCC
FD553166       <-- CCTCCGGTTGTAGGGTCATTGTCACGGCCCCTCTCTCCAGATGCAACGCC
EY909675       <-- CCTCCGGTTGTAGGGTCATTGTCACGGCCCCTCTCTCCAGATGCAACGCC
EV574304       <-- CCTCCGGTTGTAGGGTCATTGTCACGGCCCCTCTCTCCAGATGCAACGCC
FD935105       <-- CCTCCGGTTGTAGGGTCATTGTCACGGCCCCTCTCTCCAGATGCAACGCC
FD969311       <-- CCTCCGGTTGTAGGGTCATCGTCACGGCCCCTCTCTCCAGATGCAACGCC
EW719647       <-- CCTCCGGTTGTAGGGTCATTGTCACGGCCCCTCTCTCCAGATGCAACGCC
EV539593       --> CCTCCGGTTGTAGGGTCATTGTCACGGCCCCTCTCTCCAGATGCAACGCC
EW714529       --> CCTCCGGTTGTAGGGTCATTGTCACGGCCCCTCTCTCCAGATGCAACGCC
EY913450       --> CCTCCGGTTGTAGGGTCATTGTCACGGCCCCTCTCTCCAGATGCAACGCC
FD552162       --> CCTCCGGTTGTAGGGTCATTGTCACGGCCCCTCTCTCCAGATGCAACGCC
FD556959       --> CCTCCGGTTGTAGGGTCATTGTCACGGCCCCTCTCTCCAGATGCAACGCC
FD937585       --> CCTCCGGTTGTAGGGTCATTGTCACGGCCCCTCTCTCCAGATGCAACGCC
FD937606       --> CCTCCGGTTGTAGGGTCATTGTCACGGCCCCTCTCTCCAGATGCAACGCC
FD937840       --> CCTCCGGTTGTAGGGTCATTGTCACGGCCCCTCTCTCCAGATGCAACGCC
FD938838       --> CCTCCGGTTGTAGGGTCATTGTCACGGCCCCTCTCTCCAGATGCAACGCC
FD969824       --> CCTCCGGTTGTAGGGTCATTGTCACGGCCCCTCTCTCCAGATGCAACGCC
EX890527       --> CCTCCGGTTGTAGGGTCATTGTCACGGCCCCTCTCTCCAGATGCAACGCC
FD561595       --> CCTCCGGTTGTAGGGTCATTGTCACGGCCCCTCTCTCCAGATGCAACGCC
FD973661       --> CCTCCGGTTGTAGGGTCATCGTCACGGCCCCTCTCTCCAGATGCAACGCC
EW718326       --> CCTCCGGTTGTAGGGTCATTGTCACGGCCCCTCTCCCCAGATGCAACGCC
EV569862       --> CCTCCGGTTGTAGGGTCATTGTCACGGCCCCTCTCTCCAGATGCAACGCC
EX888722       --> CCTCCGGTTGTAGGGTCATTGTCACGGCCCCTCTCTCCAGATGCAACGCC

               451    -    501
UN25412        --> AGCCTCCCTACCAACGGACTCCTCACGGCACCGGTAAATCTCGTAGGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547988       <-- AGCCTCCCTACCAACGGACTCCTCACGGCACCGGTAAATCTCGTAGGAAG
EW722060       <-- AGCCTCCCTACCAACGGACTCCTCACGGCACCGGTAAATCTCGTAGGAAG
EX894024       <-- AGCCTCCCTACCAACGGACTCCTCACGGCACCGGTAAATCTCGTAGGAAG
FD553166       <-- AGCCTCCCTACCAACGGACTCCTCACGGCACCGGTAAATCTCGTAGGAAG
EY909675       <-- AGCCTCCCTACCAACGGACTCCTCACGGCACCGGTAAATCTCGTAGGAAG
EV574304       <-- AGCCTCCCTACCAACGGACTCCTCACGGCACCGGTAAATCTCGTAGGAAG
FD935105       <-- AGCCTCCCTACCAACGGACTCCTCACGGCACCGGTAAATCTCGTAGGAAG
FD969311       <-- AGCCTCCCTACCAACGGACTCCTCACGGCACCGGTAAATTTCGTAGGAAG
EW719647       <-- AGCCTCCCTACCGACGGACTCCTCACGGCACCG.................
EV539593       --> AGCCTCCCTACCAACGGACTCCTCACGGCACCGGTAAATCTCGTAGGAAG
EW714529       --> AGCCTCCCTACCGACGGACTCCTCACGGCACCGGTAAATCTCGTAGGAAG
EY913450       --> AGCCTCCCTACCAACGGACTCCTCACGGCACCGGTAAATCTCGTAGGAAG
FD552162       --> AGCCTCCCTACCAACGGACTCCTCACGGCACCGGTAAATCTCGTAGGAAG
FD556959       --> AGCCTCCCTACCAACGGACTCCTCACGGCACCGGTAAATCTCGTAGGAAG
FD937585       --> AGCCTCCCTACCAACGGACTCCTCACGGCACCGGTAAATCTCGTAGGAAG
FD937606       --> AGCCTCCCTACCAACGGACTCCTCACGGCACCGGTAAATCTCGTAGGAAG
FD937840       --> AGCCTCCCTACCAACGGACTCCTCACGGCACCGGTAAATCT.........
FD938838       --> AGCCTCCCTACCAACGGACTCCTCACGGCACCGGTAAATCTCGTAGGAAG
FD969824       --> AGCCTCCCTACCAACGGACTCCTCACGGCACCTGTAAATCTCGTAGGAAG
EX890527       --> AGCCTCCCTACCAACGGACTCCTCACGGCACCGGTAAATCTCGTAGGAAG
FD561595       --> AGCCTCCCTACCAACGGACTCCTCACGGCACCGGTAAATCTCGTAGGAAG
FD973661       --> AGCCTCCCTACCAACGGACTCCTCACGGCACCGGTAAATCTCGTAGGAAG
EW718326       --> AGCCTCCCTACCAACGGACTCCTCACGGCACCGGTAAATCTCGTAGGAAG
EV569862       --> AGCCTCCCTACCAACGGACTCCTCACGGCACCGGTAAATCTCGTAGGAAG
EX888722       --> AGCCTCCCTACCAACGGACTCCTCACGGCACCGGTAAATCTCGTAGGAAG

               501    -    551
UN25412        --> CACCGTAACCGGCGGCATCAGCATCTTGCAATTCGTCAATGGCCTCTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547988       <-- CACCGTAACCGGCGGCATCAGCATCTTGCAATTCGTCAATGGCCTCTTTA
EW722060       <-- CACCGTAACCGGCGGCATCAGCATCTTGCAATTCGTCAATGGCCTCTTTA
EX894024       <-- CACCGTAACCGGCGGCATCAGCATCTTGCAATTCGTCAATGGTCTCTTTA
FD553166       <-- CACCGTAACCGGCGGCATCAGCATCTTGCAATTCGTCAATGGCCTCTTTA
EY909675       <-- CACCGTAACCGGCGGCATCAGCATCTTGCAATTCGTCAATGGCCTCTTTA
EV574304       <-- CACCGTAACCGGCGGCATCAGCATCTTGCAATTCGTCAATGGCCTCTTTA
FD935105       <-- CACCGTAACCGGCGGCATCAGCATCTTGCAATTCGTCAATGGCCTCTTTA
FD969311       <-- CTCCGTAACCGGCGGCATCAGCATCTTGCAATTCGTCAATGGCCTCTTTA
EW719647       <-- ..................................................
EV539593       --> CTCCGTAACCGGCGGCATCAGCATCTTGCAATTCGTCAATGGCCTCTTTA
EW714529       --> CACCGTAACCGGCGGCATCAGCATCTTGCAATTCGTCAATGGCCTCTTTA
EY913450       --> CACCGTAACCGGCGGCATCAGCATCTTGCAATTCGTCAATGGCCTCTTTA
FD552162       --> CACCGTAACCGGCGGCATCAGCATCTTGCAATTCGTCAATGGCCTCTTTA
FD556959       --> CACCGTAACCGGCGGCATCAGCATCTTGCAATTCGTCAATGGCCTCTTTA
FD937585       --> CACCGTAACCGGCGGCATCAGCATCTTGCAATTCGTCAATGGCCTCTTTA
FD937606       --> CACCGTAACCGGCGGCATCAGCATCTTGCAATTCGTCAATGGCCTCTTTA
FD937840       --> ..................................................
FD938838       --> CACCGTAACCGGCGGCATCAGCATCTTGCAATTCGTCAATGGCCTCTTTA
FD969824       --> CGCCGTAACCGGCGGCATCAGCATCTTGCAATTCGTCACTGGCCTCTTTA
EX890527       --> CACCGTAACCGGCGGCATCAGCATCTTGCAATTCGTCAATGGTCTCTTTA
FD561595       --> CACCGTAACCGGCGGCATCAGCATCTTGCAATTCGTCAATGGCCTCTTTA
FD973661       --> CTCCGTAACCGGCGGCATCAGCATCTTGCAATTCGTCAATGGCCTCTTTA
EW718326       --> CACCGTAACCGGCGGCATCAGCATCTTGCAATTCGTCAATGGCCTCTTTA
EV569862       --> CACCGTAACCGGCGGCATCAGCATCTTGCAATTCGTCAATGGCCTCTTTA
EX888722       --> CACCGTAACCGGCGGCATCAGCATCTTGCAATTCGTCAATGGCCTCTTTA

               551    -    601
UN25412        --> GGCTCCTCTAACTGATTTAAAACCAAGTATCCCTTCTTGGTTTGGTTACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547988       <-- GGCTCCTCTAACTGATTTAAAACCAAGTATCCCTTCTTGGTATGGTTACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722060       <-- GGCTCCCCTAACTGATTTAAAACCAAGTCTCCCTTCTTGGTTTGGTTACG  Raphanus sativus var. oleiformis
EX894024       <-- GGCTCCTCTAACTGATTTAAAACCAAGTCTCCCTTCTTGGTTTGGTTACG  Raphanus sativus var. oleiformis
FD553166       <-- GGCTCCTCTAACTGATTTAAAACCAAGTATCCCTTCTTGGTTTGGTTACG  Raphanus raphanistrum subsp. landra
EY909675       <-- GGCTCCTCTAACTGATTTAAAACCAAGTATCCCTTCTTGGTATGGTTACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV574304       <-- GGCTCCTCTAACTGATTTAAAACCAAGTATCCCTTCTTGGTTTGGTTACG  Raphanus raphanistrum subsp. landra
FD935105       <-- GGCTCCTCTAACTGATTTAAAACCAAGTCTCCCTTCTTGGTTTGGTTACG  Raphanus sativus var. oleiformis
FD969311       <-- GGCTCCTCTAACTGATTTAAAACCAAGTATCCCTTCTTGGTATGGTTACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW719647       <-- ..................................................  Raphanus sativus var. oleiformis
EV539593       --> GGCTCCTCTAACTGATTTAAAACCAAGTATCCCTTCTTGGTATGGTTACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714529       --> GGCTCCTCTAACTGATTTAAAACCAAGTCTCCCTTCTTGGTTTGGTTACG  Raphanus sativus var. oleiformis
EY913450       --> GGCTCCTCTAACTGATTTAAAACCAAGTATCCCTTCTTGGTATGGTTACG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552162       --> GGCTCCTCTAACTGATTTAAAACCAAGTATCCCTTCTTGGTATGGTTACG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556959       --> GGCTCCTCTAACTGATTTAAAACCAAGTATCCCTTCTTGGTTTGGTTACG  Raphanus raphanistrum subsp. landra
FD937585       --> GGCTCCTCTAACTGATTTAAAACCAAGTCTCCCTTCTTGGTTTGGTTACG  Raphanus sativus var. oleiformis
FD937606       --> GGCTCCTCTAACTGATTTAAAACCAAGTCTCCCTTCTTGGTTTGGTTACG  Raphanus sativus var. oleiformis
FD937840       --> ..................................................  Raphanus sativus var. oleiformis
FD938838       --> GGCTCCTCTAACTGATTTAAAACCAAGTCTCCCTTCTTGGTTTGGTTACG  Raphanus sativus var. oleiformis
FD969824       --> GGCTCCTCTAACTGATCTAAAACCAAGTATCCCTTCTTGGTATGGTTACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX890527       --> GGCTCCTCTAACTGATTTAAAACCAAGTCTCCCTTCTTGGTTTGGTTACG  Raphanus sativus var. oleiformis
FD561595       --> GGCTCCTCTAACTGATTTAAAACCAAGTCTCCCTTCTTGGTTTGGTTACG  Raphanus sativus var. oleiformis
FD973661       --> GGCTCCTCTAACTGATTTAAAACCAAGTATCCCTTCTTGGTATGGTTACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW718326       --> GGCTCCCCTAACTGATTTAAAACCAAGTCTCCCTTCTTGGTTTGGTTACG  Raphanus sativus var. oleiformis
EV569862       --> GGCTCCTCTAACTGATTTAAAACCAAGTATCCCTTCTTGGTTTGGTTACG  Raphanus raphanistrum subsp. landra
EX888722       --> GGCTCCTCTAACTGATTTAAAACCAAGTCTCCCTTCTTGGTTTGGTTACG  Raphanus sativus var. oleiformis

               601    -    651
UN25412        --> GTGTTTTTCCTTTCTGTTGTTTTATGTTTT-GTGTCATGGCCATTAACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547988       <-- GTGTTTTTCCTTTCTGTTGTTTTATGTTTTTGTGTCATGGCCATTAACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722060       <-- GTGTTTTTCCTTTCTGTTGTTTTATGTTTT-GTGTCATGGCCATTAACAT  Raphanus sativus var. oleiformis
EX894024       <-- GTGTTTTTCCTTTCTGTTGTTTTATGTTTT-GTGTCATGGCCATTAACAT  Raphanus sativus var. oleiformis
FD553166       <-- GTGTTTTTCCTTTCTGTTGTTTTATGTTTT-GTGTCATGGCCATTAACCT  Raphanus raphanistrum subsp. landra
EY909675       <-- GTGTTTTTCCTTTCTGTTGTTTTATGTTTTTGTGTCATGGCCATTAACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV574304       <-- GTGTTTTTCCTTTCTGTTGTTTTATGTTTT-GTGTCATGGCCATTAACCT  Raphanus raphanistrum subsp. landra
FD935105       <-- GTGTTTTTCCTTTCTGTTGTTTTATGTTTT-GTGTCATGGCCATTAACAT  Raphanus sativus var. oleiformis
FD969311       <-- GTGTTTTTCCTTTCTGTTGTTTTATGTTTTTGTGTCATGGCCATTAACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW719647       <-- ..................................................  Raphanus sativus var. oleiformis
EV539593       --> GTGTTTTTCCTTTCTGTTGTTTTATGTTTTTGTGTCATGGCCATTAACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714529       --> GTGTTTTTCCTTTCTGTTGTTTTATGTTTT-GTGTCATGGCCATTAACAT  Raphanus sativus var. oleiformis
EY913450       --> GTGTTTTTCCTTTCTGTTGTTTTATGTTTTTGTGTCATGGCCATTAACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552162       --> GTGTTTTTCCTTTCTGTTGTTTTATGTTTTTGTGTCATGGCCATTAACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556959       --> -TGTTT............................................  Raphanus raphanistrum subsp. landra
FD937585       --> GTGTTTTTCCTTTCTGTTGTTTTATGTTTT-GTGTCATGGCCATTAACAT  Raphanus sativus var. oleiformis
FD937606       --> GTGTTTTTCCTTTCTGTTGTTTTATGTTTT-GTGTCATGGCCATTAACAT  Raphanus sativus var. oleiformis
FD937840       --> ..................................................  Raphanus sativus var. oleiformis
FD938838       --> -TGTTTTTCCTTTCTGTTGTTTTATGTTTT-GTGTCATGGCCATTAACAT  Raphanus sativus var. oleiformis
FD969824       --> GTGTTTTTCCTTTCTGTTGTTTTATGTTTTTGTGTCATGGCCATTAACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX890527       --> GTGTTTTTCCTTTCTGTTGTTTTATGTTTT-GTGTCATGGCCATTAACAT  Raphanus sativus var. oleiformis
FD561595       --> GTGTTTTTCCTTTCTGTTGTTTTATGTTTT-GTGTCATGGCCATTAACAT  Raphanus sativus var. oleiformis
FD973661       --> GTGTTTTTCCTTTCTGTTGTTTTATGTTTTTGTGTCATGGCCATTAACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW718326       --> GTGTTTTTCCTTTCTGTTGTTTTATGTTTT-GTGTCATGGCCATTAACAT  Raphanus sativus var. oleiformis
EV569862       --> GTGTTTTTCCTTTCTGTTGTTTTATGTTTT-GTGTCATGGCCATTAACCT  Raphanus raphanistrum subsp. landra
EX888722       --> GTGTTTTTCCTTTCTGTTGTTTTATGTTTT-GTGTCATGGCCATTAACAT  Raphanus sativus var. oleiformis

               651    -    701
UN25412        --> GTATGCTTACGTATGCATGCATGAAATAAGGTCTATTATGCGTATGTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547988       <-- GTATGCTTACGTATGCATGCATGAAATAAGGTCTATTATGCGTATGTCTC
EW722060       <-- GTATGCTTACGTATGCATGCATGAAATAAGGTCTATTATGCGTATGTCTC
EX894024       <-- GTATGCTTACGTATGCATGTATGAAATAAGGTCTATTATGCGTATGTCTC
FD553166       <-- GTATGCTTACGTATGCATGCATGAAATAAGGTCTATTATGCGTATGTCTC
EY909675       <-- GTATGCTTACGTATGCATGCATGAAATAAGGTCTATTATGCGTATGTCTC
EV574304       <-- GTATGCTTACGTATGCATGCATGAAATAAGGTCTATTATGCGTATGTCTC
FD935105       <-- GTATGCTTACGTATGCATGCATGAAATAAGGTCTATTATGCGTATGTCTC
FD969311       <-- GTATGCTTACGTATGCATGCATGAAATAAGGTCTATTATGCGTATGTCTC
EW719647       <-- ..................................................
EV539593       --> GTATGCTTACGTATGCATGCATGAAATAAGGTCTATTATGCGTATGTCTC
EW714529       --> GTATGCTTACGTATGCAAGCATGAAATAAGGTCTATTATGCGTATGTCTC
EY913450       --> GTATGCTTACGTATGCATGCATGAAATA-GGTCTATTATGCGTATGTCTC
FD552162       --> GTATGCTTACGTATGCATGCATGAAATA-GGTCTATTATGCGTATGTCTC
FD556959       --> ..................................................
FD937585       --> GTATGCTTACGTATGCATGCATGAAA........................
FD937606       --> GTATGCTTACGTATGCATGCATGAAATAAGGTCTATTATGCGTATGTCTC
FD937840       --> ..................................................
FD938838       --> GTATGCTTACGTATGCATGCATGAA.........................
FD969824       --> GTATGCTTACGTATGCATGCATGAAATAAG-TCTATTATGCGTATGTCTC
EX890527       --> GTATGCTTACGTATGCATGTATGAAA........................
FD561595       --> GTATGCTTACGTATGCATGCATGAAATAAGGTCTATTATGCGTATGTCTC
FD973661       --> GTATGCTTACGTATGCATGCATGAAATAAG-TCTATTATGCGTATGTCTC
EW718326       --> GTATGCTTACGTATGCATGCATGAAATAAG-TCTATTATGCGTATGT...
EV569862       --> GTATGCTTACGTATGCATGCATGAAATAAGGTCTATTATGCGTATGTCTC
EX888722       --> GTATGCTTACGTATGCATGCATGAAATAAGGTCTATTATGCGTATGTCTC

               701    -    751
UN25412        --> TACTTTCAAAGTATTGTGGTTGTAACTTCTTGTCCAGGTCTTCATTTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547988       <-- TACTTTCAAAGTATTGTGATTGTAACTTCTTGTCCAGGTCTTCATTTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722060       <-- TACTTTCAAAGTATTGTGGTTGTAACTTCTTGTCCAGGTCTTCATTTACA  Raphanus sativus var. oleiformis
EX894024       <-- TACTTTCAAAGTATTGTGGTTGTAACTTCTTGTCCAGGTCTTCATTTGCA  Raphanus sativus var. oleiformis
FD553166       <-- TACTTTCAAAGCATTGTGGTTGTAACTTCTTGTCCAGGTCTTCTTTTGCA  Raphanus raphanistrum subsp. landra
EY909675       <-- TACTTTCAAAGTATTGTGATTGTAACTTCTTGTCCAGGTCTTCATTTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV574304       <-- TACTTTCAAAGTATTGTGGTTGTAACTTCTTGTCCAGGTCTTCTTTTGCA  Raphanus raphanistrum subsp. landra
FD935105       <-- TACTTTCAAAGTATTGTGGTTGTAACTTCTTGTCCAGGTCTTCATTTGCA  Raphanus sativus var. oleiformis
FD969311       <-- TACTTTCAAAATATTGTGGTTGTAACTTCTTGTCCAGGTCTTCATTTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW719647       <-- ..................................................  Raphanus sativus var. oleiformis
EV539593       --> TACTTTCAAAATATTGTGGTTGTAACTTCTTGTCCAGGTCTTCATTTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714529       --> TACTTTCAA-GTATTGTGGTTGTAACTTCTTGTCCAGGTCTTCATTTGCA  Raphanus sativus var. oleiformis
EY913450       --> TACTTTCAA-GTATTGTGATTGTAACTTCTTGTCCAGGTCTTCATTTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552162       --> TACTTTCAAAGTATTGTGATTGTAACTTCTTGT.................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556959       --> ..................................................  Raphanus raphanistrum subsp. landra
FD937585       --> ..................................................  Raphanus sativus var. oleiformis
FD937606       --> TACTTTCAAAGTATTGTGGTTGTAACTTCTTGTCCAGGTCTTCATTTGCA  Raphanus sativus var. oleiformis
FD937840       --> ..................................................  Raphanus sativus var. oleiformis
FD938838       --> ..................................................  Raphanus sativus var. oleiformis
FD969824       --> TACTTTCAAAGTATTGTGGTTGTActtc......................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX890527       --> ..................................................  Raphanus sativus var. oleiformis
FD561595       --> TACTTTCAAAGTATTGTGGTTGTAACTTCTTGTCCAGGTCTTCATTTGCA  Raphanus sativus var. oleiformis
FD973661       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW718326       --> ..................................................  Raphanus sativus var. oleiformis
EV569862       --> TACTTTCAAAGTATTGTGGTTGTAACTTCTTGTCCAGGTCTTCTTTTGCA  Raphanus raphanistrum subsp. landra
EX888722       --> TACTTTCAAAGTATTGTGGTTGTAACTTCTTGTCCAGGTCTTCATTTGCA  Raphanus sativus var. oleiformis

               751    -    801
UN25412        --> TGCATAGTGCTGCAATGAAATGTAACGAATGAAAATAAAATAGTTTCCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547988       <-- TGCATAGTGCTGCAATGAAATGTAACGAATGAAAATAAAATAGTTTCCCT
EW722060       <-- TGCATAGTGCTGCAATGAAATGTAACGAATGAAAATAAAATAGTTTCCCT
EX894024       <-- TGCATAGTGCTGCAATGAAATGTAACGAATGAAAATAAAATAGTTTCCCT
FD553166       <-- TGCATAGTGCTGCAATGAAATGTAACGAATGAAAATAAAATAGTTTCCCT
EY909675       <-- TGCATAGTGCTGCAATGAAATGTAACGAATGAAAATAAAATAGTTTCCCT
EV574304       <-- TGCATAGTGCTGCAATGAAATGTAACGAATGAAAATAAAATAGTTTCCCT
FD935105       <-- TGCATAGTGCTGCAATGAAATGTAACGAATGAAAGTAAAATAGTTTCCCT
FD969311       <-- TGCATAGTGCTGCAATGAAATGAAACGAATGAAAATAAAATAGTTTCCt.
EW719647       <-- ..................................................
EV539593       --> TGCATAGTGCTGCAATGAAATG............................
EW714529       --> TGCATAGTGCTGCAATGAAATGTAACGAATGAAAATAAAATAGTTTCCC.
EY913450       --> TGCATAGTGC........................................
FD552162       --> ..................................................
FD556959       --> ..................................................
FD937585       --> ..................................................
FD937606       --> TGCATAGTGCTGCAATGAA-TGTAACGAATGA..................
FD937840       --> ..................................................
FD938838       --> ..................................................
FD969824       --> ..................................................
EX890527       --> ..................................................
FD561595       --> TGCATAGTGCTGCAATGAAATGTAACGA-TGAAAA...............
FD973661       --> ..................................................
EW718326       --> ..................................................
EV569862       --> TGCATAGTGCTGCAATGAAATGTAACGAATGAAAATAAAATAGTTTCCCT
EX888722       --> TGCATAGTGCTGCAATGAAATGTAACGAATGAAAATAAAATAGTTTCCCT

               801    -    851
UN25412        --> TTTATG....
                   ~~~~~~~~~~
FD547988       <-- TTTATGc...
EW722060       <-- TTT.......
EX894024       <-- TTTAaaaaaa
FD553166       <-- TTTATGt...
EY909675       <-- TTTATGc...
EV574304       <-- TTT.......
FD935105       <-- TTTATGt...
FD969311       <-- ..........
EW719647       <-- ..........
EV539593       --> ..........
EW714529       --> ..........
EY913450       --> ..........
FD552162       --> ..........
FD556959       --> ..........
FD937585       --> ..........
FD937606       --> ..........
FD937840       --> ..........
FD938838       --> ..........
FD969824       --> ..........
EX890527       --> ..........
FD561595       --> ..........
FD973661       --> ..........
EW718326       --> ..........
EV569862       --> TTT.......
EX888722       --> TT........