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Alignment for radish unigene UN25607

               1      -     51
UN25607        --> GGTAAAGACATGTTGGAAAATTATTATTATTAGAAATTTCAAGTGCATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY917141       <-- ..TAAAGACATGT-GGAAAAT-AT-AT-AT-AGAAATTTCAAGTGCATAT
FD564026       <-- ........tttttcGGAAAATTATTATTATTAGAAATTTCAAGTGCATAT
EX886379       <-- ........................TATTATTAGAAATTTCAAGTGCATAT
EV569046       <-- ...............................AGAAATTTCAAGTGCATAT
FD560938       <-- ..................................................
FD964614       <-- ..................................................
EY912703       --> GGTAAAGACATGTTGGAAAATTATTATTATTAGAAATTTCAAGTGCATAT
EV573646       --> ...............................AGAAATTTCAAGTGCATAT
FD565235       --> ...............................AGAAATTTCAAGTGCATAT
FD567609       --> ...............................AGAAATTTCAAGTGCATAT
FD960571       --> ...............................AGAAATTTCAAGTGCATAT
EX890786       --> ..................................................

               51     -    101
UN25607        --> TAATAATAAATAACCAAACAATTTTCAAGTGCAAACCTACAGAACAATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY917141       <-- TAATAATAAATAACCAAACAATTTTCAAGTGCAAAC-TACAGAACAATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564026       <-- TAATAATAAATAACCAAACAATTTTCAAGTGCAAAC-TACAGAACAATGA  Raphanus sativus var. oleiformis
EX886379       <-- TAATAATAAATAACCAAACAATTTTCAAGTGCAAACCTACAGAACAATGA  Raphanus sativus var. oleiformis
EV569046       <-- TAATAATAAATAACCAAACAATTTTCAATTGCAAACCTACAGAACAATGA  Raphanus raphanistrum subsp. landra
FD560938       <-- ...............AAACAATTTTCAAGTGCAAAC-TACAGAACAATGA  Raphanus sativus var. oleiformis
FD964614       <-- ..................CAATTTTCAATTGCAAAC-TACAGAACAATGA  Raphanus raphanistrum subsp. maritimus
EY912703       --> TAATAATAAATAACCAAACAATTTTCAAGTGCAAACCTACAGAACAATGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573646       --> TAATAATAAATAACCAAACAATTTTCAATTGCAAACCTACAGAACAATGA  Raphanus raphanistrum subsp. landra
FD565235       --> TAATAATAAATAACCAAACAATTTTCAAGTGCAAACCTACAGAACAATGA  Raphanus sativus var. oleiformis
FD567609       --> TAATAATAAATAACCAAACAATTTTCAAGTGCAAACCTACAGAACAATGA  Raphanus sativus var. oleiformis
FD960571       --> TAATAATAAATAACCAAACAATTTTCAATTGCAAACCTACAGAACAATGA  Raphanus raphanistrum subsp. maritimus
EX890786       --> ..................................................  Raphanus sativus var. oleiformis

               101    -    151
UN25607        --> ATAAAAAGACATGATGCAATATAGTAGTAGATCAGAAGAAGATTGTAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY917141       <-- ATAAAAAGACATGATGCAATATAGTAGTAGATCAGAAGAAGATTGTAGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564026       <-- ATAAAAAGACATGATGCAATATAGTAGTAGATCAGAAGAAGATTGTAGCC  Raphanus sativus var. oleiformis
EX886379       <-- ATAAAAAGACATGATGCAATATAGTAGTAGATCAGAAGAAGATTGTAGCC  Raphanus sativus var. oleiformis
EV569046       <-- ATAAAAAGACATAATGCAATATAGTAGTAGATCAGAAGAAGATTGTAGCC  Raphanus raphanistrum subsp. landra
FD560938       <-- ATAAAAAGACATGATGCAATATAGTAGTAGACCAGAAGAAGATTGTAGCC  Raphanus sativus var. oleiformis
FD964614       <-- ATAAAAAGACATAATGCAATATAGTAGTAGATCAGAAGAAGATTGTAGCC  Raphanus raphanistrum subsp. maritimus
EY912703       --> ATAAAAAGACATGATGCAATATAGTAGTAGATCAGAAGAAGATTGTAGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573646       --> ATAAAAAGACATAATGCAATATAGTAGTAGATCAGAAGAAGATTGTAGCC  Raphanus raphanistrum subsp. landra
FD565235       --> ATAAAAAGACATGATGCAATATAGTAGTAGACCAGAAGAAGATTGTAGCC  Raphanus sativus var. oleiformis
FD567609       --> ATAAAAAGACATGATGCAATATAGTAGTAGATCAGAAGAAGATTGTAGCC  Raphanus sativus var. oleiformis
FD960571       --> ATAAAAAGACATAATGCAATATAGTAGTAGATCAGAAGAAGATTGTAGCC  Raphanus raphanistrum subsp. maritimus
EX890786       --> ..................................................  Raphanus sativus var. oleiformis

               151    -    201
UN25607        --> AAGGCCACAAAAGCTGATGCGAAGCTAGCTCCGGCGAAGTTGATGGCCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY917141       <-- AAGGCCACAAAAGCTGATGCGAAGCTAGCTCCGGCGAAGTTGATGGCCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564026       <-- AAGGCCACAAAAGCTGATGCGAAGCTAGCTCCGGCGAAGTTGATGGCCGG  Raphanus sativus var. oleiformis
EX886379       <-- AAGGCCACAAAAGCTGATGCGAAGCTAGCTCCGGCGAAGTTGATGGCCGG  Raphanus sativus var. oleiformis
EV569046       <-- AAGGCCACGAAAGCTGATGCGAAGCTAGCTCCGGCGAAGTTGATGGCCGG  Raphanus raphanistrum subsp. landra
FD560938       <-- AAGGCCACAAAAGCTGATGCGAAGCTAGCTCCGGCGAAGTTGATGGCCGG  Raphanus sativus var. oleiformis
FD964614       <-- AAGGCCACGAAAGCTGATGCGAAGCTAGCTCCGGCGAAGTTGATGGCCGG  Raphanus raphanistrum subsp. maritimus
EY912703       --> AAGGCCACAAAAGCTGATGCGAAGCTAGCTCCGGCGAAGTTGATGGCCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573646       --> AAGGCCACGAAAGCTGATGCGAAGCTAGCTCCGGCGAAGTTGATGGCCGG  Raphanus raphanistrum subsp. landra
FD565235       --> AAGGCCACAAAAGCTGATGCGAAGCTAGCTCCGGCGAAGTTGATGGCCGG  Raphanus sativus var. oleiformis
FD567609       --> AAGGCCACAAAAGCTGATGCGAAGCTAGCTCCGGCGAAGTTGATGGCCGG  Raphanus sativus var. oleiformis
FD960571       --> AAGGCCACGAAAGCTGATGCGAAGCTAGCTCCGGCGAAGTTGATGGCCGG  Raphanus raphanistrum subsp. maritimus
EX890786       --> ..................................................  Raphanus sativus var. oleiformis

               201    -    251
UN25607        --> AGCCGAGTTTGTTGGTTTGGCCGTTGAAGAAGCTCCGGTGCTTCCAGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY917141       <-- AGCCGAGTTTGTTGGTTTGGCCGTTGAAGAAGCTCCGGTGCTTCCAGTGG
FD564026       <-- AGCCGAGTTTGTTGGTTTGGCCGTTGAAGAAGCTCCGGTGCTTCCAGTGG
EX886379       <-- AGCCGAGTTTGTTGGTTTGGCCGTTGAAGAAGCTCCGGTGCTTCCAGTGG
EV569046       <-- AGCCGAGTTTGTTGGTTTGGCCGTTGAAGAAGCTCCGGTGCTTCCAGTGG
FD560938       <-- AGCCGAGTTTGTTGGTTTGGCCGTTGAAGAAGCTCCGGTGCTTCCAGTGG
FD964614       <-- AGCCGAGTTTGTTGGTTTGGCCGTTGAAGAAGCTCCGGTGCTTCCAGTGG
EY912703       --> AGCCGAGTTTGTTGGTTTGGCCGTTGAAGAAGCTCCGGTGCTTCCAGTGG
EV573646       --> AGCCGAGTTTGTTGGTTTGGCCGTTGAAGAAGCTCCGGTGCTTCCAGTGG
FD565235       --> AGCCGAGTTTGTTGGTTTGGCCGTTGAAAAAGCTCCGGTGCTTCCAGTGG
FD567609       --> AGCCGAGTTTGTTGGTTTGGCCGTTGAAAAAGCTCCGGTGCTTCCAGTGG
FD960571       --> AGCCGAGTTTGTTGGTTTGGCCGTTGAAGAAGCTCCGGTGCTTCCAGTGG
EX890786       --> ..................................................

               251    -    301
UN25607        --> AAGATGCCGGAGGAGTTGTGGTAGTTGCTGGCGATGTCGAAGGTGTAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY917141       <-- AAGATGCCGGAGGAGTTGTGGTAGTTGCTGGCGATGTCGAAGGTGTAGTG
FD564026       <-- AAGATGCCGGAGGAGTTGTGGTAGTTGCTGGCGATGTCGAAGGTGTAGTG
EX886379       <-- AAGATGCCGGAGGAGTTGTGGTAGTTGCTGGCGATGTCGAAGGTGTAGTG
EV569046       <-- AAGATGCCGGAGGAGTTGTGGTAGTTGATGGCGATGTCGAAGGTGTAGTG
FD560938       <-- AAGATGCCGGAGGAGTTGTGGTAGTTGCTGGCGATGCCGAAGGTGTAGTG
FD964614       <-- AAGATGCCGGAGGAGTTGTGGTAGTTGCTGGCGATGTCGAAGGTGTAGTG
EY912703       --> AAGATGCCGGAGGAGTTGTGGTAGTTGCTGGCGATGTCGAAGGTGTAGTG
EV573646       --> AAGATGCCGGAGGAGTTGTGGTAGTTGATGGCGATGTCGAAGGTGTAGTG
FD565235       --> AAGATGCCGGAGGAGTTGTGGTAGTTGCTGGCGATGCCGAAGGTGTAGTG
FD567609       --> AAGATGCCGGAGGAGTTGTGGTAGTTGCTGGCGATGTCGAAGGTGTAGTG
FD960571       --> AAGATGCCGGAGGAGTTGTGGTAGTTGCTGGCGATGTCGAAGGTGTAGTG
EX890786       --> ........................................AGGTGTAGTG

               301    -    351
UN25607        --> GTGCCATTGCCGGCTTTGCATAGCGAGATGTCAGCTTTGGCGCCACAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY917141       <-- GTGCCATTGCCGGCTTTGCATGGCGAGATGTCAGCTTTGGCGCCACAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564026       <-- GTGCCATTGCCGGCTTTGCATAGCGAGATGTCAGCTTTGGCGCCACAAGC  Raphanus sativus var. oleiformis
EX886379       <-- GTGCCATTGCCGGCTTTGCATAGCGAGATGTCAGCTTTGGCGCCACAAGC  Raphanus sativus var. oleiformis
EV569046       <-- GTGCCATTGCCGGCTTTGCATAGCGAGATGTCAGCCTTGGCGCCACAAGC  Raphanus raphanistrum subsp. landra
FD560938       <-- GTGCCATTGCCGGCTTTGCATAGCGAGATGTCAGCTTTGGCGCCACAAGC  Raphanus sativus var. oleiformis
FD964614       <-- GTGCCATTGCCGGCTTTGCATAGCGAGATGTCAGCCTTGGCGCCACAGGC  Raphanus raphanistrum subsp. maritimus
EY912703       --> GTGCCATTGCCGGCTTTGCATGGCGAGATGTCAGCTTTGGCGCCACAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573646       --> GTGCCATTGCCGGCTTTGCATAGCGAGATGTCAGCCTTGGCGCCACAAGC  Raphanus raphanistrum subsp. landra
FD565235       --> GTGCCATTGCCGGCTTTGCATAGCGAGATGTCAGCTTTGGCGCCACAAGC  Raphanus sativus var. oleiformis
FD567609       --> GTGCCATTGCCGGCTTTGCATAGCGAGATGTCAGCTTTGGCGCCACAAGC  Raphanus sativus var. oleiformis
FD960571       --> GTGCCATTGCCGGCTTTGCATAGCGAGATGTCAGCCTTGGCGCCACAGGC  Raphanus raphanistrum subsp. maritimus
EX890786       --> GTGCCATTGCCGGCTTTGCATAGCGAGATGTCAGCTTTGGCGCCACAAGC  Raphanus sativus var. oleiformis

               351    -    401
UN25607        --> TTTAGGGAGAACGAGAGCGTTTTCTTTAGTGAGGTTAAGCGATCTGAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY917141       <-- TTTAGGGAGAACGAGAGCGTTTTCTTTAGTGAGGTTAAGCGATCTGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564026       <-- TTTAGGGAGAACGAGAGCGTTTTCTCTAGTGAGGTTAAGCGATCTGAGCA  Raphanus sativus var. oleiformis
EX886379       <-- TTTAGGGAGAACGAGAGCGTTTTCTTTAGTGAGGTTAAGCGATCTGAGCA  Raphanus sativus var. oleiformis
EV569046       <-- TTTAGGAAGAACGAGAGCGTTTTCTTTAGTGAGGTTAAGCGATCTGAGCA  Raphanus raphanistrum subsp. landra
FD560938       <-- TTTAGGGAGAACGAGAGCGTTTTCTTTAGTGAGGTTAAGCGATCTGAGCA  Raphanus sativus var. oleiformis
FD964614       <-- TTTAGGAAGAACGAGAGCGTTTTCTTTAGTGAGGTTAAGCGATCTGAGCA  Raphanus raphanistrum subsp. maritimus
EY912703       --> TTTAGGGAGAACGAGAGCGTTTTCTTTAGTGAGGTTAAGCGATCTGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573646       --> TTTAGGAAGAACGAGAGCGTTTTCTTTAGTGAGGTTAAGCGATCTGAGCA  Raphanus raphanistrum subsp. landra
FD565235       --> TTTAGGGAGAACGAGAGCGTTTTCTTTAGTGAGGTTAAGCGATCTGAGCA  Raphanus sativus var. oleiformis
FD567609       --> TTTAGGGAGAACGAGAGCGTTTTCTCTAGTGAGGTTAAGCGATCTGAGCA  Raphanus sativus var. oleiformis
FD960571       --> TTTAGGAAGAACGAGAGCGTTTTCTTTAGTGAGGTTAAGCGATCTGAGCA  Raphanus raphanistrum subsp. maritimus
EX890786       --> TTTAGGGAGAACGAAAGCGTTTTCTTTAGTGAGGTTAAGCGATCTGAGCA  Raphanus sativus var. oleiformis

               401    -    451
UN25607        --> TGTCGACATTGTTGAATACGGAGCAAAGACACGTCGCGTCGTTCGCCACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY917141       <-- TGTCGACATTGTTGAATACGGAGCAAAGACACGTCGCGTCGTTCGCCACG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564026       <-- TGTCGACATTGTTGAATACGGAGCAAAGACACGTCGCGTCGTTCGCCACG  Raphanus sativus var. oleiformis
EX886379       <-- TGTCGACATTGTTGAATACGGAGCAAAGACACGTCGCGTCGTTCGCCACG  Raphanus sativus var. oleiformis
EV569046       <-- TGTCGACATTGTTGAATACGGAGCAAAGACACGTCGCGTCTTTCGCCACG  Raphanus raphanistrum subsp. landra
FD560938       <-- TGTCGACATTGTTGAATACGGAGCAAAGACACGTCGCGTCGTTCGCCACG  Raphanus sativus var. oleiformis
FD964614       <-- TGTCGACATTGTTGAATACGGAGCAAAGACACGTCGCGTCTTTCGCCACG  Raphanus raphanistrum subsp. maritimus
EY912703       --> TGTCGACATTGTTGAATACGGAGCAAAGACACGTCGCGTCGTTCGCCACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573646       --> TGTCGACATTGTTGAATACGGAGCAAAGACACGTCGCGTCTTTCGCCACG  Raphanus raphanistrum subsp. landra
FD565235       --> TGTCGACATTGTTGAATACGGAGCAAAGACACGTCGCGTCGTTCGCCACG  Raphanus sativus var. oleiformis
FD567609       --> TGTCGACATTGTTGAATACGGAGCAAAGACACGTCGCGTCGTTCGCCACG  Raphanus sativus var. oleiformis
FD960571       --> TGTCGACATTGTTGAATACGGAGCAAAGACACGTCGCGTCTTTCGCCACG  Raphanus raphanistrum subsp. maritimus
EX890786       --> TGTCGACATTGTTGAATACGGAGCAAAGACACGTCGCGTCGTTCGCCACG  Raphanus sativus var. oleiformis

               451    -    501
UN25607        --> ATCTCATTCAATGGTAGGCAACACGACGCAGGAGGTGGAGGAGTCACCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY917141       <-- ATCTCATTCAATGGTAGGCAACACGACGCAGGAGGTGGAGGAGTCACCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564026       <-- ATCTCATTCAATGGTAGGCAACACGACGCAGGAGGTGGAGGAGTCACCGA  Raphanus sativus var. oleiformis
EX886379       <-- ATCTCATTCAATGGTAGGCAACACGACGCAGGAGGTGGAGGAGTCACCGA  Raphanus sativus var. oleiformis
EV569046       <-- ATCTCATTCAACGGCAGGCAACACGACGCAGGAGGTGGAGGAGTCACCGA  Raphanus raphanistrum subsp. landra
FD560938       <-- ATCTCATTCAATGGTAGGCAACACGACGCAGGAGGTGGAGGAGTCACCGA  Raphanus sativus var. oleiformis
FD964614       <-- ATCTCATTCAACGGCAGGCAACACGACGCAGGAGGTGGAGGAGTCACCGA  Raphanus raphanistrum subsp. maritimus
EY912703       --> ATCTCATTCAATGGTAGGCAACACGACGC.....................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573646       --> ATCTCATTCAACGGCAGGCAACACGACGCAGGAGGTGGAGGAGTCACCGA  Raphanus raphanistrum subsp. landra
FD565235       --> ATCTCATTCAATGGTAGGCAACACGACGCAGGAGGTGGAGGAGTCACCGA  Raphanus sativus var. oleiformis
FD567609       --> ATCTCATTCAATGGTAGGCAACACGACGCAGGAGGTGGAGGAGTCACCGA  Raphanus sativus var. oleiformis
FD960571       --> ATCTCATTCAACGGCAGGCAACACGACGCAGGAGGTGGAGGAGTCACCGA  Raphanus raphanistrum subsp. maritimus
EX890786       --> ATCTCATTCAATGGTAGGCAACACGACGCAGGAGGTGGAGGAGTCACCGA  Raphanus sativus var. oleiformis

               501    -    551
UN25607        --> GTGAAGATAAGGCTGACATGGCATCAGTTTCTGTATACACGGCATTGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY917141       <-- GTGAAGATAAGGCTGACATGGCATCAGTTTCTGTATACACGGCATTGAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564026       <-- GTGAAGATAAGGCTGACATGGCATCAGTTTCTGTATACACGGCATTGAGT  Raphanus sativus var. oleiformis
EX886379       <-- GTGAAGATAAGGCTGACATGGCATCAGTTTCTGTATACACGGCATTGAGT  Raphanus sativus var. oleiformis
EV569046       <-- GTGGAGATAAGGCTGACATGGCATCAGTTTCTGTATACACGGCATTGAGT  Raphanus raphanistrum subsp. landra
FD560938       <-- GTGAAGATAAGGCTGACATGGCATCAGTTTCTGTATACACGGCATTGAGT  Raphanus sativus var. oleiformis
FD964614       <-- GTGGAGATAAGGCTGACATGGCATCAGTTTCTGTATACACGGCATTGAGT  Raphanus raphanistrum subsp. maritimus
EY912703       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573646       --> GTGGAGATAAGGCTGACATGGCATCAGTTTCTGTATACACGGCATTGAGT  Raphanus raphanistrum subsp. landra
FD565235       --> GTGAAGATAAGGCTGACATGGCATCAGTTTCTGTATACACGGCATTGAGT  Raphanus sativus var. oleiformis
FD567609       --> GTGAAGATAAGGCTGACATGGCATCAGTTTCTGTATACACGGCATTGAGT  Raphanus sativus var. oleiformis
FD960571       --> GTGGAGATAAGGCTGACATGGCATCAGTTTCTGTATACACGGCATTGAGT  Raphanus raphanistrum subsp. maritimus
EX890786       --> GTGAAGATAAGGCTGACATGGCATCAGTTTCTGTATACACGGCATTGAGT  Raphanus sativus var. oleiformis

               551    -    601
UN25607        --> GAGCATCTCCTTTTCCTCCAGCTCCACCTGTTGTCGGTGTAGGTTCAGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY917141       <-- GAGCATCTCCTTTTCCTCCAGCTCCACCTGTTGTCGGTGTAGGTTCAGCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564026       <-- GAGCATCTCCTTTTCCTCCAGCTCCACCTGTTGTCGGTGGAGGTTCAGCG  Raphanus sativus var. oleiformis
EX886379       <-- GAGCATCTCCTTTTCCTCCAGCTCCACCTGTTGTCGGTGTAGGTTCAGCG  Raphanus sativus var. oleiformis
EV569046       <-- GAGCATCTCCTTTTCCTCCACCTCCACCTGTTGTCGGTGTAGGTTCAGCG  Raphanus raphanistrum subsp. landra
FD560938       <-- GAGCATCTCCTTTTCCTCCAGCTCCACCTGTTGTCGGTGTAGGTTCAGCG  Raphanus sativus var. oleiformis
FD964614       <-- GAGCATCTCCTTTTCCTCCACCTCCACCTGTTGTCGGTGTAGGTTCAGCG  Raphanus raphanistrum subsp. maritimus
EY912703       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573646       --> GAGCATCTCCTTTTCCTCCACCTCCACCTGTTGTCGGTGTAGGTTCAGCG  Raphanus raphanistrum subsp. landra
FD565235       --> GAGCATCTCCTTTTCCTCCAGCTCCACCTGTTGTCGGTGTAGGTTCAGCG  Raphanus sativus var. oleiformis
FD567609       --> GAGCATCTCCTTTTCCTCCAGCTCCACCTGTTGTCGGTGGAGGTTCAGCG  Raphanus sativus var. oleiformis
FD960571       --> GAGCATCTCCTTTTCCTCCACCTCCACCTGTTGTCGGTGTAG........  Raphanus raphanistrum subsp. maritimus
EX890786       --> GAGCATCTCCTTTTCCTCCAGCTCCACCTGTTGTCGGTGTAGGTTCAGCG  Raphanus sativus var. oleiformis

               601    -    651
UN25607        --> TTAGACGAAGAAACAGCGAAAAACACAAAAACGACGGCGACGGCGAATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY917141       <-- TTAGACGAAGAAACAGCGAAAAACACAAAAACGACGGCGACGGCGAATCT
FD564026       <-- TTAGACGAAGAAACAGCGAAAAACACAAAAACGACGGCGACGGCGAATCT
EX886379       <-- TTAGACGAAGAAACAGCGAAAAACACAAAAACGACGGCGACGGCGAATCT
EV569046       <-- TTAGACGAAGAAACAGCGAAAAACACAAAAACAACGGCGACGGCGAATCT
FD560938       <-- TTAGACGAAGAAATAGCGAAAAACACAAAAACGACGGCGACGGCGAATCT
FD964614       <-- TTAGACGAAGAAACAGCGAAAAACACAAAAACAACGGCGACGGCGAATCT
EY912703       --> ..................................................
EV573646       --> TTAGACGAAGAAACAGCGAAAAACACAAAAACAACGGCGACGGCGAATCT
FD565235       --> TTAGACGAAGAAATAGCGAAAAACACAAAAACGACGGCGACGGCGAATCT
FD567609       --> TTAGACGAAGAAACAGCGAAAAACACAAAAACGACGGCGACGGCGAATCT
FD960571       --> ..................................................
EX890786       --> TTAGACGAA.........................................

               651    -    701
UN25607        --> AACGGCCTCCATTTTCAAAAACAAAGAGTTAATGTTTAAAACAAACGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY917141       <-- AACGGACTCCATTTTCAAAAACAAAGAGTTAATGTTTAAAACAAACGGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564026       <-- AACGGCCTCCATTTTCAAAAACAAAGAGTTAATGTTTAAAACAAACGGTT  Raphanus sativus var. oleiformis
EX886379       <-- AACGGCCTCCATTTTCAAAAACAAAAAGTTAATGTTTAAAACAAACGGTT  Raphanus sativus var. oleiformis
EV569046       <-- AACGGCCTCCATTTTCAAAAACAAAGAGTTAATGTTTCAAAAAAACGGTT  Raphanus raphanistrum subsp. landra
FD560938       <-- AACGGCCTCCATTTTCAAAAACAAAGAGTTAATGTTTAAAACAAACGGTT  Raphanus sativus var. oleiformis
FD964614       <-- AACGGCCTCCATTTTCAAAAACAAAGAGTTAATGTTTCAAAAAAACGGTT  Raphanus raphanistrum subsp. maritimus
EY912703       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573646       --> AACGGCCTCCATTTTCAAAAACAAAGAGTTAATGTTTCAAAAAAACGGTT  Raphanus raphanistrum subsp. landra
FD565235       --> AACGGCC...........................................  Raphanus sativus var. oleiformis
FD567609       --> AACGGCCTCCATTTTCAAAAACAAAGAGTTAATGTTTAAAACAAACGGTT  Raphanus sativus var. oleiformis
FD960571       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX890786       --> ..................................................  Raphanus sativus var. oleiformis

               701    -    751
UN25607        --> TTGTTGTCTTCCTTTGAAAGTTGTGTCCATTGCTGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY917141       <-- TTGTTGTCTTCCTTTGAAAGTTGTGTGGATTGCTc...  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564026       <-- TTGTTGTCTTCCTTTGAAAGTTGTGTggattcccct..  Raphanus sativus var. oleiformis
EX886379       <-- TTGTTGTCTTCCTTTGAAAGTTGTGTCC..........  Raphanus sativus var. oleiformis
EV569046       <-- TTGTTGTCTTCCTTCGAAAGTTGTGTCC..........  Raphanus raphanistrum subsp. landra
FD560938       <-- TTGTTGTCTTCCTTTGAAAGTTGTGTCC..........  Raphanus sativus var. oleiformis
FD964614       <-- TTGTTGTCTTCATTCGAAAGTTGTGTGGATTGCTGTCC  Raphanus raphanistrum subsp. maritimus
EY912703       --> ......................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573646       --> TTGTTGTCTTCCTTCGAAAGTTGTGTCC..........  Raphanus raphanistrum subsp. landra
FD565235       --> ......................................  Raphanus sativus var. oleiformis
FD567609       --> TTGTTGT...............................  Raphanus sativus var. oleiformis
FD960571       --> ......................................  Raphanus raphanistrum subsp. maritimus
EX890786       --> ......................................  Raphanus sativus var. oleiformis